BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044872
(604 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/604 (74%), Positives = 513/604 (84%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG VSNDCF AIEFY MR+EGFLP NFTFPFVLKACAR D QLGV+ H+L+VK G
Sbjct: 83 MIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGG 142
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
DCD FVKTSL+ LY CGYL DA KVFDDIPDKNVVSWTAIISGYI G EAI+MFR
Sbjct: 143 FDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFR 202
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RLL L PDSF+IVRVL+ACTQLGDL++ +WIH + E G RNVFV TSLVD+YAKCG
Sbjct: 203 RLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCG 262
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
NMEKAR VFD MPEKDIVSW +MIQGYA NG PKEA+D+F MQREN+KP+ YT+VGVLS
Sbjct: 263 NMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLS 322
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LGALELG W S ++RNEFL NPVLGT LID+YAKCG M++A +VF+ MK+KD+VV
Sbjct: 323 ACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVV 382
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++SGL+MNGYVK++FG+FGQ+EK GI+P+GNTF+GLLCGCTHAGLVDEGR++FNSM
Sbjct: 383 WNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMY 442
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R FSLTP IEHYGCMVDLLGR+G LDEAH+LI++MPME NAIVWGALL CR+H+ T LA
Sbjct: 443 RFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLA 502
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E L QLI LEPWNSGNYVLLSNIYSA+ KW++AAK+R M +K IQK GCSW+EVDG+
Sbjct: 503 ELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGI 562
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEFLVGD HPLSEKIY+KLDEL K+K AG+VPTTD VLFDIEEEEK++FL CHSEKL
Sbjct: 563 VHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKL 622
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI+ P VIR+ KNLRVCGDCH AIKLIS ITGREI VRDNNRFHCF EGSCSC
Sbjct: 623 AIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSC 682
Query: 601 KDFW 604
D+W
Sbjct: 683 NDYW 686
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 203/372 (54%), Gaps = 8/372 (2%)
Query: 71 LLNLYVHCGY-LADA---LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 126
LLN+ + C + +D +F I N+ W +I G ++ ++AI + + G
Sbjct: 48 LLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEG 107
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
P++F+ VL AC +L DL IH V + G +VFV TSLV LYAKCG +E A
Sbjct: 108 FLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAH 167
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
+VFD +P+K++VSW+++I GY G +EA+DMF + NL P+ +T+V VLSAC LG
Sbjct: 168 KVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLG 227
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
L G W + + N +GT+L+DMYAKCG M +A VF M +KD V W A++
Sbjct: 228 DLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQ 287
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-VFSL 365
G ++NG K A +F Q+++ ++P+ T VG+L C G ++ G + R F
Sbjct: 288 GYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLY 347
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
P++ ++DL + G + A E+ K M E + +VW A+++G ++ ++ +
Sbjct: 348 NPVLGT--ALIDLYAKCGSMSRAWEVFKGMK-EKDRVVWNAIISGLAMNGYVKISFGLFG 404
Query: 426 QLIALEPWNSGN 437
Q+ L GN
Sbjct: 405 QVEKLGIKPDGN 416
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/604 (71%), Positives = 504/604 (83%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG V NDCFQ +IE Y+SMR EG P +FTFPFVLKACAR D +LGV+ HSL+VKAG
Sbjct: 79 MIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAG 138
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FVK SL+NLY CG++ +A KVFDDIPDKN SWTA ISGY+ G EAI+MFR
Sbjct: 139 CEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFR 198
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RLL GL+PDSFS+V VL+AC + GDL + +WI Y+ E G RNVFVAT+LVD Y KCG
Sbjct: 199 RLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCG 258
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
NME+AR VFD M EK+IVSWSSMIQGYASNG PKEALD+F+ M E LKP+ Y MVGVL
Sbjct: 259 NMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLC 318
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+CA LGALELG WAS+ + NEFL N VLGT LIDMYAKCGRM +A +VFR M+ KD+VV
Sbjct: 319 SCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVV 378
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA +SGL+M+G+VK A G+FGQ+EK GI+P+ NTFVGLLC CTHAGLV+EGR++FNSM
Sbjct: 379 WNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSME 438
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
VF+LTP IEHYGCMVDLLGR+G LDEAH+LIKSMPME NAIVWGALL GCRLH+ T L
Sbjct: 439 CVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLV 498
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E VL +LIALEPW+SGNYVLLSNIY+ASHKW +AAKIRS+M ++G++KI G SW+EVDGV
Sbjct: 499 EVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGV 558
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH+FLVGD SHPLSEKIY+KL ELA LKAAG+VPTTDHVLFDIEEEEK++F+ CHSEKL
Sbjct: 559 VHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKL 618
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI+TAP D I + KNLRVCGDCHEAIK IS+I GREIIVRDNNRFHCF +G CSC
Sbjct: 619 AVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSC 678
Query: 601 KDFW 604
KD+W
Sbjct: 679 KDYW 682
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 193/358 (53%), Gaps = 2/358 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ +++ GLD D ++ +L + G + ++ D + N+ + +I G +
Sbjct: 30 HAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCF 89
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
+E+I ++ + GL PDSF+ VL AC ++ D +H V +AG + FV SL
Sbjct: 90 QESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISL 149
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
++LY KCG ++ A +VFD +P+K+ SW++ I GY G +EA+DMF + L+P+
Sbjct: 150 INLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDS 209
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+++V VLSAC G L G W ++ N + N + T L+D Y KCG M +A VF
Sbjct: 210 FSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDG 269
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M +K+ V W++++ G + NG K A +F ++ G++P+ VG+LC C G ++ G
Sbjct: 270 MLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELG 329
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
N ++ L + ++D+ + G++D A E+ + M + + +VW A ++G
Sbjct: 330 DWASNLINGNEFLDNSVLGTA-LIDMYAKCGRMDRAWEVFRGM-RKKDRVVWNAAISG 385
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 135/270 (50%), Gaps = 14/270 (5%)
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
L K IH + G + ++ ++ GN + R+ DQ E +I +++MI+G
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
N +E+++++++M++E L P+ +T VL ACA + ELGV S + + ++
Sbjct: 83 LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEAD 142
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
+ +LI++Y KCG + A KVF ++ DK+ W A +SG G + A +F +L +
Sbjct: 143 AFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLE 202
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQF-----FNSMSR-VFSLTPMIEHYGCMVDLLG 380
G++P+ + V +L C G + G N M R VF T +++ Y G
Sbjct: 203 MGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFY-------G 255
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ G ++ A + M +E N + W +++ G
Sbjct: 256 KCGNMERARSVFDGM-LEKNIVSWSSMIQG 284
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/604 (70%), Positives = 504/604 (83%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG VS DCF AI Y SMR GFLP NFT PFVLKACAR+ D +LG++ HSL+VKAG
Sbjct: 85 MIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAG 144
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FVKTSLL+LYV C DALKVFDDIPDKNVVSWTAII+GYI+ G+ EAI F+
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFK 204
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+LL GLKPDSFS+V+VL AC +LGD ++ +WI Y++++G GRNVFVATSL+D+Y KCG
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCG 264
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+E+A +F MPEKDIVSWS+MIQGYA NG P++ALD+F+ MQ ENLKP+ YTMVGVLS
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+LGAL+LG+WASS M+RNEFLSNPVLGT LIDMY+KCG + QA ++F MK KD+VV
Sbjct: 325 ACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVV 384
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ GLSMNG+ K F +F +EK GI+P+ NTF+GLLCGCTH G V+EGRQFFN+M
Sbjct: 385 WNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMK 444
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
RVFSLTP IEHYGCMVDLLGR+G L+EAH+LI +MPM+PNA+VWGALL GC+LHK T LA
Sbjct: 445 RVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLA 504
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E VL +LI LEPWNSGNYV LSNIYS +H+W +A KIRS M ++ IQKIR CSW+E+DG+
Sbjct: 505 EQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGI 564
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEFLVGD SH LSEKIY+KLDEL +LKA G VPTT+ VLFDIEEEEK++FL HSEKL
Sbjct: 565 VHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKL 624
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI + P VIR+ KNLRVCGDCH+AIKLISKIT REII+RD NRFH FI+GSCSC
Sbjct: 625 AVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSC 684
Query: 601 KDFW 604
+D+W
Sbjct: 685 RDYW 688
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 204/367 (55%), Gaps = 12/367 (3%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHC----GYLADALKVFDDIPDKNVVSWTAIISGYIN 108
H+ +++ LD D + LLNL + C G + VF + + N+ W +I G ++
Sbjct: 36 HARLLRLHLDQDNY----LLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVS 91
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
+ ++AI+++ + G P++F+I VL AC + D+ IH + +AG +VFV
Sbjct: 92 KDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFV 151
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
TSL+ LY KC N + A +VFD +P+K++VSW+++I GY S+G +EA+ F + L
Sbjct: 152 KTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGL 211
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
KP+ +++V VL+ACA LG G W ++ + N + T+L+DMY KCG + +A
Sbjct: 212 KPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANL 271
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+F M +KD V W+ ++ G + NG + A +F Q++ ++P+ T VG+L C G
Sbjct: 272 IFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGA 331
Query: 349 VDEGRQFFNSMSR-VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+D G + M R F P++ ++D+ + G + +A E+ +M + + +VW A+
Sbjct: 332 LDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQAWEIFTAMKRK-DRVVWNAM 388
Query: 408 LAGCRLH 414
+ G ++
Sbjct: 389 MVGLSMN 395
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/604 (70%), Positives = 504/604 (83%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG VS DCF AI Y SMR GFLP NFT PFVLKACAR+ D +LG++ HSL+VKAG
Sbjct: 85 MIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAG 144
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FVKTSLL+LYV C DALKVFDDIPDKNVVSWTAII+GYI+ G+ EAI F+
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFK 204
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+LL GLKPDSFS+V+VL AC +LGD ++ +WI Y++++G GRNVFVATSL+D+Y KCG
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCG 264
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+E+A +F MPEKDIVSWS+MIQGYA NG P++ALD+F+ MQ ENLKP+ YTMVGVLS
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+LGAL+LG+WASS M+RNEFLSNPVLGT LIDMY+KCG + QA ++F MK KD+VV
Sbjct: 325 ACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVV 384
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ GLSMNG+ K F +F +EK GI+P+ NTF+GLLCGCTH G V+EGRQFFN+M
Sbjct: 385 WNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMK 444
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
RVFSLTP IEHYGCMVDLLGR+G L+EAH+LI +MPM+PNA+VWGALL GC+LHK T LA
Sbjct: 445 RVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLA 504
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E VL +LI LEPWNSGNYV LSNIYS +H+W +A KIRS M ++ IQKIR CSW+E+DG+
Sbjct: 505 EQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGI 564
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEFLVGD SH LSEKIY+KLDEL +LKA G VPTT+ VLFDIEEEEK++FL HSEKL
Sbjct: 565 VHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKL 624
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI + P VIR+ KNLRVCGDCH+AIKLISKIT REII+RD NRFH FI+GSCSC
Sbjct: 625 AVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSC 684
Query: 601 KDFW 604
+D+W
Sbjct: 685 RDYW 688
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 204/367 (55%), Gaps = 12/367 (3%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHC----GYLADALKVFDDIPDKNVVSWTAIISGYIN 108
H+ +++ LD D + LLNL + C G + VF + + N+ W +I G ++
Sbjct: 36 HARLLRLHLDQDNY----LLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVS 91
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
+ ++AI+++ + G P++F+I VL AC + D+ IH + +AG +VFV
Sbjct: 92 KDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFV 151
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
TSL+ LY KC N + A +VFD +P+K++VSW+++I GY S+G +EA+ F + L
Sbjct: 152 KTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGL 211
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
KP+ +++V VL+ACA LG G W ++ + N + T+L+DMY KCG + +A
Sbjct: 212 KPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANL 271
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+F M +KD V W+ ++ G + NG + A +F Q++ ++P+ T VG+L C G
Sbjct: 272 IFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGA 331
Query: 349 VDEGRQFFNSMSR-VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+D G + M R F P++ ++D+ + G + +A E+ +M + + +VW A+
Sbjct: 332 LDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQAWEIFTAMK-KKDRVVWNAM 388
Query: 408 LAGCRLH 414
+ G ++
Sbjct: 389 MVGLSMN 395
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/605 (69%), Positives = 497/605 (82%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKA 59
+IRG VSND F+ A+ Y SMR GF P NFTFPFVLKAC R H F +G+ HSL++K
Sbjct: 72 LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKT 131
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D D FVKT L+ LY G+L DA KVFD+IP+KNVVSWTAII GYI G EA+ +F
Sbjct: 132 GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLF 191
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R LL GL+PDSF++VR+L AC+++GDL++ +WI GY+ E+G NVFVATSLVD+YAKC
Sbjct: 192 RGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKC 251
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+ME+ARRVFD M EKD+V WS++IQGYASNG PKEALD+F+ MQREN++P+ Y MVGV
Sbjct: 252 GSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVF 311
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SAC+ LGALELG WA M+ +EFLSNPVLGT LID YAKCG +AQA +VF+ M+ KD V
Sbjct: 312 SACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCV 371
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
V+NAV+SGL+M G+V AFGVFGQ+ K G+QP+GNTFVGLLCGCTHAGLVD+G ++F+ M
Sbjct: 372 VFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGM 431
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
S VFS+TP IEHYGCMVDL R+G L EA +LI+SMPME N+IVWGALL GCRLHK T L
Sbjct: 432 SSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQL 491
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AEHVL QLI LEPWNSG+YVLLSNIYSASH+W++A KIRS + KG+QK+ GCSWVEVDG
Sbjct: 492 AEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDG 551
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VVHEFLVGD SHPLS KIY KL+ L L+ AG+ PTT+ VLFD+EEEEK+YFL CHSEK
Sbjct: 552 VVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEK 611
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AF LI+T KDVIR+ KNLRVCGDCHEAIKL+SK+TGREIIVRDNNRFH F EGSCS
Sbjct: 612 LAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCS 671
Query: 600 CKDFW 604
C+D+W
Sbjct: 672 CRDYW 676
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 206/389 (52%), Gaps = 5/389 (1%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
+ H L+++ GL D ++ LL +H A VF P N+ + +I G ++
Sbjct: 21 QCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSND 80
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD-LSTAKWIHGYVNEAGKGRNVFVA 169
+A++++ + G PD+F+ VL ACT+L +H V + G +VFV
Sbjct: 81 AFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVK 140
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
T LV LY+K G + AR+VFD++PEK++VSW+++I GY +G EAL +F + L+
Sbjct: 141 TGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLR 200
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P+ +T+V +L AC+ +G L G W +M + + N + T+L+DMYAKCG M +A +V
Sbjct: 201 PDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRV 260
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F M +KD V W+A++ G + NG K A VF ++++ ++P+ VG+ C+ G +
Sbjct: 261 FDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGAL 320
Query: 350 DEGRQFFNSM-SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
+ G M F P++ ++D + G + +A E+ K M + +V+ A++
Sbjct: 321 ELGNWARGLMDGDEFLSNPVLG--TALIDFYAKCGSVAQAKEVFKGM-RRKDCVVFNAVI 377
Query: 409 AGCRLHKKTDLAEHVLNQLIALEPWNSGN 437
+G + A V Q++ + GN
Sbjct: 378 SGLAMCGHVGAAFGVFGQMVKVGMQPDGN 406
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L L AK H + G ++ ++ L+ + A VF Q P +I ++++
Sbjct: 13 LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTL 72
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA-LELGVWASSFMERNE 262
I+G SN ++A+ ++ +M++ P+ +T VL AC L +G+ S + +
Sbjct: 73 IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
F + + T L+ +Y+K G + A KVF E+ +K+ V W A++ G +G A G+F
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
L + G++P+ T V +L C+ G + GR M S+ + +VD+ +
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATS-LVDMYAKC 251
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAG 410
G ++EA + M +E + + W AL+ G
Sbjct: 252 GSMEEARRVFDGM-VEKDVVCWSALIQG 278
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/604 (66%), Positives = 480/604 (79%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG VS D F +A+ Y SM +P +FTF FVLKACAR + F LGV HSL+ K G
Sbjct: 75 MIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTG 134
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
DCD FVKT+++ Y CG+L DA KVFDD+ KNVVSWT +I G I G EA+++FR
Sbjct: 135 FDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFR 194
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
LL GL+PD F IVRVL AC +LGDL + +WI + E G RNVFVATSLVD+Y KCG
Sbjct: 195 GLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCG 254
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ME+AR VFD M EKDIV WS+MIQGYASNG P+EA+++F+ M++ N++P+ Y MVG LS
Sbjct: 255 SMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALS 314
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+CASLGALELG WA M EFLSNPVLGT+LID YAKCG M +A V++ MK+KD+VV
Sbjct: 315 SCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVV 374
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
+NAV+SGL+M G V AFGVFGQ+ K GI PN +TFVGLLCGCTHAGLVD+GR +FNSMS
Sbjct: 375 FNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMS 434
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
FS+TP IEHYGCMVDLL R+G LDEAH LIK MPM+ N IVWG+LL GCRLH++T LA
Sbjct: 435 HDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLA 494
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
EHVL QLI LEPWNSG+YVLLSNIYSAS +W++A KIRS + +KG+QK+ G SWVEVDGV
Sbjct: 495 EHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGV 554
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEFLVGD SHPLS+KIY KL+ L LK AG+ PTT+ VLFD+EEEEK++FL CHSEKL
Sbjct: 555 VHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKL 614
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF LI+T K VIR+ KNLRVCGDCHEAIK ISK+TGREI++RDNNRFHCF +G+CSC
Sbjct: 615 AVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSC 674
Query: 601 KDFW 604
+D+W
Sbjct: 675 RDYW 678
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 178/343 (51%), Gaps = 5/343 (1%)
Query: 87 VFDDIP-DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
VF P + N + +I G +++ A++++ + + PDSF+ VL AC +L
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
IH V + G +VFV T++V Y+KCG + A +VFD M K++VSW+ MI
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
G G +EA+D+F + L+P+ + +V VL ACA LG LE G W M
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSR 238
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
N + T+L+DMY KCG M +A VF M +KD V W+A++ G + NG + A +F ++
Sbjct: 239 NVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMR 298
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS-RVFSLTPMIEHYGCMVDLLGRSGQ 384
K ++P+ VG L C G ++ G M+ F P++ ++D + G
Sbjct: 299 KVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLG--TSLIDFYAKCGS 356
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
++EA + K M E + +V+ A+++G ++ + A V Q+
Sbjct: 357 MEEALGVYKMMK-EKDRVVFNAVISGLAMYGQVGAAFGVFGQM 398
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/604 (59%), Positives = 462/604 (76%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GFV+N F ++ + S+R G FTFP VLKAC R +LG+ HSL+VK G
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG 141
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D TSLL++Y G L DA K+FD+IPD++VV+WTA+ SGY G EAI++F+
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFK 201
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ G+KPDS+ IV+VL+AC +GDL + +WI Y+ E +N FV T+LV+LYAKCG
Sbjct: 202 KMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCG 261
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
MEKAR VFD M EKDIV+WS+MIQGYASN FPKE +++F M +ENLKP+ +++VG LS
Sbjct: 262 KMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLS 321
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+CASLGAL+LG W S ++R+EFL+N + LIDMYAKCG MA+ +VF+EMK+KD V+
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVI 381
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
NA +SGL+ NG+VK++F VFGQ EK GI P+G+TF+GLLCGC HAGL+ +G +FFN++S
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAIS 441
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V++L +EHYGCMVDL GR+G LD+A+ LI MPM PNAIVWGALL+GCRL K T LA
Sbjct: 442 CVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLA 501
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E VL +LIALEPWN+GNYV LSNIYS +W++AA++R MM KG++KI G SW+E++G
Sbjct: 502 ETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGK 561
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEFL D SHPLS+KIY+KL++L +++ GFVPTT+ V FD+EEEEK+ L HSEKL
Sbjct: 562 VHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKL 621
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A GLI+T VIR+ KNLRVCGDCHE +KLISKIT REI+VRDNNRFHCF GSCSC
Sbjct: 622 AVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSC 681
Query: 601 KDFW 604
D+W
Sbjct: 682 NDYW 685
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 194/388 (50%), Gaps = 6/388 (1%)
Query: 39 ACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS 98
AC H Q+ H ++ L D F+ LL + + +F N+
Sbjct: 23 ACTVNHLKQI----HVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFL 78
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
+ ++I+G++N E +++F + GL F+ VL ACT+ +H V
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 159 EAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALD 218
+ G +V TSL+ +Y+ G + A ++FD++P++ +V+W+++ GY ++G +EA+D
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
+F M +KP+ Y +V VLSAC +G L+ G W +ME E N + TTL+++YA
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
KCG+M +A VF M +KD V W+ ++ G + N + K +F Q+ + ++P+ + VG
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
L C G +D G + + R LT + ++D+ + G + E+ K M E
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLF-MANALIDMYAKCGAMARGFEVFKEMK-E 376
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
+ ++ A ++G + L+ V Q
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/604 (58%), Positives = 464/604 (76%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GFV+N F ++ + S+R G FTFP VLKAC R + +LG+ HSL+VK G
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCG 141
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D TSLL++Y G L DA KVF++IP+++VV+WTA+ SGY G EAI++F+
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFK 201
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ G++PDS+ IV+VL+AC +GDL + +WI ++ E +N FV T+LV+LYAKCG
Sbjct: 202 KMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCG 261
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
MEKAR VFD M EKDIV+WS+MIQGYASN FPKE ++ F M +ENLKP+ +++VG LS
Sbjct: 262 KMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLS 321
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+CASLGAL+LG W S ++R+EFL+N + LIDMYAKCG MA+ +VF+EMK+KD V+
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVI 381
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
NA +SGL+ NG+VK++F VFGQ EK GI P+G+TF+GLLCGC HAGL+ +G +FFN++S
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAIS 441
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V++L +EHYGCMVDL GR+G LD+A+ LI MPM PNAIVWGALL+GCRL K T LA
Sbjct: 442 CVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLA 501
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E VL +LIALEPWN+GNYV LSNIYS S +W++AA++R MM KG++KI G SW+E++G
Sbjct: 502 ETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGT 561
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEFL D SHPLS+KIY+KL++L +++ GFVPTT+ V FD+E+EEK+ L HSEKL
Sbjct: 562 VHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKL 621
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI+T VIR+ KNLRVCGDCHE +KLISKIT REI+VRDNNRFHCF GSCSC
Sbjct: 622 AVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSC 681
Query: 601 KDFW 604
D+W
Sbjct: 682 NDYW 685
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 186/374 (49%), Gaps = 2/374 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H ++ L D F+ LL + + +F N+ + +I+G++N
Sbjct: 33 HVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLF 92
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
E +++F + GL F+ VL ACT+ + +H V + G +V TSL
Sbjct: 93 HETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSL 152
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ +Y+ G + A +VF+++PE+ +V+W+++ GY + G +EA+D+F M ++P+
Sbjct: 153 LSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDS 212
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
Y +V VLSAC +G L+ G W ME E N + TTL+++YAKCG+M +A VF
Sbjct: 213 YFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDS 272
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M +KD V W+ ++ G + N + K F Q+ + ++P+ + VG L C G +D G
Sbjct: 273 MGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLG 332
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+ + R LT + ++D+ + G + E+ K M E + ++ A ++G
Sbjct: 333 EWGISLIDRHEFLTNLFM-ANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLA 390
Query: 413 LHKKTDLAEHVLNQ 426
+ L+ V Q
Sbjct: 391 KNGHVKLSFAVFGQ 404
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/590 (61%), Positives = 437/590 (74%), Gaps = 38/590 (6%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ +++ GLD D ++ +L + G + ++F + N+ + +I G + +
Sbjct: 30 HAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSF 89
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
+E+I ++ + GL PDSF+ +L AC +L D +HG V +AG + FV TSL
Sbjct: 90 QESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSL 149
Query: 173 VDLYAKCGNMEKARRVFDQMPEK------------------------------------- 195
V LY KCG ++ A +VFD +PEK
Sbjct: 150 VSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLE 209
Query: 196 -DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
DIVSWSSMIQGYASNG PKEALD+F+ M E +P+ Y MVGVL ACA LGALELG WA
Sbjct: 210 KDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWA 269
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
S+ M+RNEFL NPVLGT LIDMYAKCGRM A +VFR M+ KD VVWNA +SGL+M+G+V
Sbjct: 270 SNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHV 329
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
K AFG+FGQ+EK GI+P+GNTFVGLLC CTHAGLVDEGRQ+FNSM RVF+LTP IEHYGC
Sbjct: 330 KAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGC 389
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWN 434
MVDLLGR+G LDEAH+L+KSMPME NAIVWGALL GCRLH+ T L E VL QLIALEP N
Sbjct: 390 MVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSN 449
Query: 435 SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLS 494
SGNYVLLSNIYSASHKW DAAKIRS+M ++GI+K+ G SW+EVDGVVHEFLVGD SHPLS
Sbjct: 450 SGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLS 509
Query: 495 EKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDV 554
EKIY+KL EL LKA+G+VPTTD+VLFDIEEEEK++F+ CHSEKLA+AFGLI+TAP D
Sbjct: 510 EKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAPNDK 569
Query: 555 IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IR+ KNLRVCGDCHEAIK IS+ TGREIIVRDNNRFHCF +GSCSCKD+W
Sbjct: 570 IRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 208/375 (55%), Gaps = 42/375 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G V ND FQ +IE Y+SMR EG P +FTFPF+LKACAR D +LG++ H L+VKAG
Sbjct: 79 MIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAG 138
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV TSL++LY CG++ +A KVFDDIP+KNV +WTAIISGYI G EAI+MFR
Sbjct: 139 CESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFR 198
Query: 121 R--------------------------------------LLHRGLKPDSFSIVRVLTACT 142
R +L+ G +PD +++V VL AC
Sbjct: 199 RACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACA 258
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
+LG L W ++ N + T+L+D+YAKCG M+ A VF M +KDIV W++
Sbjct: 259 RLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNA 318
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
I G A +G K A +F M++ ++P+ T VG+L AC G ++ G + MER
Sbjct: 319 AISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMER-V 377
Query: 263 FLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFG 319
F P + ++D+ + G + +A ++ + M + + +VW A++ G ++ ++ G
Sbjct: 378 FTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEG 437
Query: 320 VFGQLEKCGIQPNGN 334
V QL +GN
Sbjct: 438 VLKQLIALEPSNSGN 452
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 147/327 (44%), Gaps = 44/327 (13%)
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
L K +H + G + ++ ++ GN + R+F Q E +I +++MI G
Sbjct: 23 LKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHG 82
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
N +E+++++++M++E L P+ +T +L ACA L +LG+ + + S+
Sbjct: 83 LVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESD 142
Query: 267 PVLGTTLIDMYAKCG--------------------------------------RMAQACK 288
+ T+L+ +Y KCG +AC
Sbjct: 143 AFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACS 202
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF M +KD V W++++ G + NG K A +F ++ G +P+ VG+LC C G
Sbjct: 203 VFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGA 262
Query: 349 VDEGRQFFNSMSR-VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
++ G N M R F P++ ++D+ + G++D A E+ + M + + +VW A
Sbjct: 263 LELGNWASNLMDRNEFLGNPVLG--TALIDMYAKCGRMDSAWEVFRGM-RKKDIVVWNAA 319
Query: 408 LAGCRLHKKTDLAEHVLNQL--IALEP 432
++G + A + Q+ +EP
Sbjct: 320 ISGLAMSGHVKAAFGLFGQMEKSGIEP 346
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/593 (54%), Positives = 435/593 (73%), Gaps = 5/593 (0%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
HA+ + + N P++ TFP LK+ +R H + G + H+ +K + V TSL
Sbjct: 104 HALRLHCLLPN----PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSL 159
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
L LY CG L A +VFD++P + VSWTA+I+ Y++ G+L EA+++ R G++PDS
Sbjct: 160 LTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDS 219
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
F+ VRVLTAC ++ DL+T + + + G ++VFVAT+ VDLY KCG M KAR VFD+
Sbjct: 220 FTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDK 279
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M +KD V+W +M+ GYASNG P+EALD+F MQ E ++P+ Y + G LSAC LGAL+LG
Sbjct: 280 MRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLG 339
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
A ++ +EFL NPVLGT LIDMYAKCG A+A VF++M+ KD +VWNA++ GL M
Sbjct: 340 RQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMT 399
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G+ K AF + GQ+EK G++ N NTF+GLLC CTH GL+ +GR++F++M++++ ++P IEH
Sbjct: 400 GHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEH 459
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
YGC+VDLL R+G L EAH+LI MPM NA++ GALL GC++H+ +LAEHVL QLI LE
Sbjct: 460 YGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLE 519
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
PWNSGNYV+LSNIYS +W DAAK+R M +KG++K+ CSWVE +G VHEF VGD SH
Sbjct: 520 PWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSH 579
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
PLS++IY KLDEL ++K G+ PTT+ V+FD+E+EEK++ L HSEKLA+AF L+ T P
Sbjct: 580 PLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGP 639
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ IR+ KNLRVC DCH AIKLIS+IT REIIVRDNNRFHCF +GSCSC D+W
Sbjct: 640 GETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/603 (53%), Positives = 436/603 (72%), Gaps = 5/603 (0%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKAGL 61
R S+ HA+ + + N P++ T P LK+ +R H + G + H+ +K
Sbjct: 47 RALTSSALHLHALRVHCLLPN----PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPS 102
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ V TSLL+LY CG L A +VFD++P + V WTA+I+ Y++ G+L EA+++ R
Sbjct: 103 HTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARN 162
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
G++PDSF+ VRVLTAC ++ DL+T + + + G ++VFVAT+ VDLY KCG
Sbjct: 163 AFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGE 222
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
M KAR VFD+M KD V+W +M+ GYASNG P+EALD+F MQ E +KP+ Y + G LSA
Sbjct: 223 MAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSA 282
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C LGAL+LG A ++ +EFL NPVLGT LIDMYAKCG +A VF++M+ KD +VW
Sbjct: 283 CTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVW 342
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA++ GL M G+ K+AF + GQ+EK G++ N NTF+GLLC CTH GL+ +GR++F++M++
Sbjct: 343 NAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTK 402
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
++ ++P IEHYGCMVDLL R+G L EAH+L+ MPM NA++ GALL GC++H+ T+LAE
Sbjct: 403 LYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAE 462
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
HVL QLI LEPWNSGNYV+LSNIYS +W DAAK+R M KG++K+ CSWVE +G V
Sbjct: 463 HVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKV 522
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
HEF VGD SHPLS++IY KLDEL ++K G+ PTT+ V+FD+E+EEK++ L HSEKLA
Sbjct: 523 HEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLA 582
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+AF L+ T P + IR+ KNLRVC DCH AIKL+S+IT REIIVRDNNRFHCF +GSCSC
Sbjct: 583 IAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCN 642
Query: 602 DFW 604
D+W
Sbjct: 643 DYW 645
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/593 (54%), Positives = 435/593 (73%), Gaps = 5/593 (0%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
HA+ + + N P++ TFP LK+ +R H + G + H+ +K + V TSL
Sbjct: 57 HALRLHCLLPN----PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSL 112
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
L LY CG L A +VFD++P + VSWTA+I+ Y++ G+L EA+++ R G++PDS
Sbjct: 113 LTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDS 172
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
F+ VRVLTAC ++ DL+T + + + G ++VFVAT+ VDLY KCG M KAR VFD+
Sbjct: 173 FTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDK 232
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M +KD V+W +M+ GYASNG P+EALD+F MQ E ++P+ Y + G LSAC LGAL+LG
Sbjct: 233 MRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLG 292
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
A ++ +EFL NPVLGT LIDMYAKCG A+A VF++M+ KD +VWNA++ GL M
Sbjct: 293 RQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMT 352
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G+ K AF + GQ+EK G++ N NTF+GLLC CTH GL+ +GR++F++M++++ ++P IEH
Sbjct: 353 GHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEH 412
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
YGC+VDLL R+G L EAH+LI MPM NA++ GALL GC++H+ +LAEHVL QLI LE
Sbjct: 413 YGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLE 472
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
PWNSGNYV+LSNIYS +W DAAK+R M +KG++K+ CSWVE +G VHEF VGD SH
Sbjct: 473 PWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSH 532
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
PLS++IY KLDEL ++K G+ PTT+ V+FD+E+EEK++ L HSEKLA+AF L+ T P
Sbjct: 533 PLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGP 592
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ IR+ KNLRVC DCH AIKLIS+IT REIIVRDNNRFHCF +GSCSC D+W
Sbjct: 593 GETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/603 (53%), Positives = 436/603 (72%), Gaps = 5/603 (0%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKAGL 61
R S+ HA+ + + N P++ T P LK+ +R H + G + H+ +K
Sbjct: 526 RALTSSALHLHALRVHCLLPN----PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPS 581
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ V TSLL+LY CG L A +VFD++P + V WTA+I+ Y++ G+L EA+++ R
Sbjct: 582 HTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARN 641
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
G++PDSF+ VRVLTAC ++ DL+T + + + G ++VFVAT+ VDLY KCG
Sbjct: 642 AFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGE 701
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
M KAR VFD+M KD V+W +M+ GYASNG P+EALD+F MQ E +KP+ Y + G LSA
Sbjct: 702 MAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSA 761
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C LGAL+LG A ++ +EFL NPVLGT LIDMYAKCG +A VF++M+ KD +VW
Sbjct: 762 CTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVW 821
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA++ GL M G+ K+AF + GQ+EK G++ N NTF+GLLC CTH GL+ +GR++F++M++
Sbjct: 822 NAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTK 881
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
++ ++P IEHYGCMVDLL R+G L EAH+L+ MPM NA++ GALL GC++H+ T+LAE
Sbjct: 882 LYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAE 941
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
HVL QLI LEPWNSGNYV+LSNIYS +W DAAK+R M KG++K+ CSWVE +G V
Sbjct: 942 HVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKV 1001
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
HEF VGD SHPLS++IY KLDEL ++K G+ PTT+ V+FD+E+EEK++ L HSEKLA
Sbjct: 1002 HEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLA 1061
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+AF L+ T P + IR+ KNLRVC DCH AIKL+S+IT REIIVRDNNRFHCF +GSCSC
Sbjct: 1062 IAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCN 1121
Query: 602 DFW 604
D+W
Sbjct: 1122 DYW 1124
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/603 (53%), Positives = 436/603 (72%), Gaps = 5/603 (0%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKAGL 61
R S+ HA+ + + N P++ T P LK+ +R H + G + H+ +K
Sbjct: 502 RALTSSALHLHALRVHCLLPN----PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPS 557
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ V TSLL+LY CG L A +VFD++P + V WTA+I+ Y++ G+L EA+++ R
Sbjct: 558 HTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARN 617
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
G++PDSF+ VRVLTAC ++ DL+T + + + G ++VFVAT+ VDLY KCG
Sbjct: 618 AFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGE 677
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
M KAR VFD+M KD V+W +M+ GYASNG P+EALD+F MQ E +KP+ Y + G LSA
Sbjct: 678 MAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSA 737
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C LGAL+LG A ++ +EFL NPVLGT LIDMYAKCG +A VF++M+ KD +VW
Sbjct: 738 CTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVW 797
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA++ GL M G+ K+AF + GQ+EK G++ N NTF+GLLC CTH GL+ +GR++F++M++
Sbjct: 798 NAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTK 857
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
++ ++P IEHYGCMVDLL R+G L EAH+L+ MPM NA++ GALL GC++H+ T+LAE
Sbjct: 858 LYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAE 917
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
HVL QLI LEPWNSGNYV+LSNIYS +W DAAK+R M KG++K+ CSWVE +G V
Sbjct: 918 HVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKV 977
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
HEF VGD SHPLS++IY KLDEL ++K G+ PTT+ V+FD+E+EEK++ L HSEKLA
Sbjct: 978 HEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLA 1037
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+AF L+ T P + IR+ KNLRVC DCH AIKL+S+IT REIIVRDNNRFHCF +GSCSC
Sbjct: 1038 IAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCN 1097
Query: 602 DFW 604
D+W
Sbjct: 1098 DYW 1100
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/515 (58%), Positives = 392/515 (76%), Gaps = 1/515 (0%)
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+P + VSWTA+I+ Y++ G+ EAI + RR G++PDSF+ VRVLTAC ++ DL T
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 151 KWIHGYV-NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ + E G +VFVAT+ +DLY KCG MEKAR VFD+M +D V+W +M+ GYAS
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
NG P+EALD+F+ MQ E KP+ YT+VG LSAC LGAL+LG A + +E L NPVL
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVL 180
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
GT LIDMYAKCG ++A VF++M ++D +VWNA++ GL M G+ K+AF + GQ++K G+
Sbjct: 181 GTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGV 240
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+ N NTF+GLLC CTH GLV++GRQ+F++M+ V+ ++P IEHYGCMVDL R+G L+EAH
Sbjct: 241 KLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAH 300
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+LI MPM NA+VWGALL GC++H+ DLAEH L QLI LEPWNSGNYV+LSNIYS S
Sbjct: 301 QLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSG 360
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
+W DAAK+R M KGI+K+ SWVE+DG VH+F VGD+SHPLS+KIY+KLDEL ++K
Sbjct: 361 RWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMK 420
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
A G+ PTT+ V+FD+E EEK+ L HSEK+A+AF LITT P + IR+ KNLRVC DCH
Sbjct: 421 AMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLRVCTDCHS 480
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
AIKLIS+IT REI+VRDNNRFHCF +G CSC D+W
Sbjct: 481 AIKLISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 170/328 (51%), Gaps = 6/328 (1%)
Query: 13 HAIEFYNSMRN---EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA-GLDCDEFVK 68
HA+E R G P +FT VL ACAR D + G + + G+ FV
Sbjct: 21 HALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEAVWAAARQEEGVAESVFVA 80
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T+ L+LYV CG + A VFD++ +++ V+W A++ GY + G+ EA+++F + G K
Sbjct: 81 TAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAK 140
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
PD +++V L+ACT+LG L + G V+ N + T+L+D+YAKCG+ +A V
Sbjct: 141 PDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMV 200
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F QM E+DI+ W++MI G G K A + M++ +K T +G+L +C G +
Sbjct: 201 FQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLV 260
Query: 249 ELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMKD-KDQVVWNAVVS 306
G M +S + ++D++++ G + +A ++ +M + VVW A++
Sbjct: 261 NDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLG 320
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
G ++ +A QL + +GN
Sbjct: 321 GCKIHRNADLAEHALKQLIRLEPWNSGN 348
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 286/604 (47%), Positives = 402/604 (66%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRGF AI + M P FTFP +LK C+R G + H+LI+K G
Sbjct: 95 MIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCG 154
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
FVK +L+++Y +CG + A +VFD++ ++NV +W ++ +GY GN EE + +F
Sbjct: 155 FGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFH 214
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L ++ D ++V VLTAC +L DL +WI+ YV E G N + TSLVD+YAKCG
Sbjct: 215 EMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCG 274
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ ARR+FDQM +D+V+WS+MI GY+ +EALD+F+ MQ+ N+ P TMV +LS
Sbjct: 275 QVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILS 334
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+CA LGALE G W F+++ LGT L+D YAKCG + + +VF +M K+ +
Sbjct: 335 SCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLS 394
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++ GL+ NG K A F + + ++PN TF+G+L C+HAGLVDEGR F SMS
Sbjct: 395 WTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMS 454
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R F + P IEHYGCMVD+LGR+G ++EA + IK+MP++PNA++W LLA C++HK ++
Sbjct: 455 RDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIG 514
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E L QLI LEP +SG+Y+LLSNIY++ +W DA K+R M +KGI+K GCS +E+DGV
Sbjct: 515 EESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGV 574
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+HEF DN H SE+IY+ ++++ ++K+AG+VP T D EE++K+ ++ HSEKL
Sbjct: 575 IHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKL 634
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI + P IRI KNLRVC DCH A KL+SK+ REI+VRD RFH F EGSCSC
Sbjct: 635 AIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSC 694
Query: 601 KDFW 604
D+W
Sbjct: 695 NDYW 698
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 187/329 (56%), Gaps = 6/329 (1%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A+ +F I + + ++ +I G+ + + EAI +F+ + ++PD F+ +L C++
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L LS + IH + + G G + FV +L+ +YA CG +E ARRVFD+M E+++ +W+SM
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
GY +G +E + +F+ M +++ + T+V VL+AC L LELG W + ++E
Sbjct: 197 FAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGL 256
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
NP L T+L+DMYAKCG++ A ++F +M +D V W+A++SG S + A +F +
Sbjct: 257 KGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHE 316
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGR--QFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++K I PN T V +L C G ++ G+ FF R+ LT + ++D +
Sbjct: 317 MQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRM-KLTVTLG--TALMDFYAK 373
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G ++ + E+ MP++ N + W L+ G
Sbjct: 374 CGSVESSIEVFGKMPVK-NVLSWTVLIQG 401
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 134/276 (48%), Gaps = 7/276 (2%)
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC--GNMEKARRVFDQMPE 194
+L C + DL+ IH ++ + VA +L++ A +M+ A +F Q+ E
Sbjct: 30 ILEQCKTIRDLNE---IHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDE 86
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
D +++ MI+G+ P EA+ +F M +++P+ +T +L C+ L AL G
Sbjct: 87 PDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQI 146
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
+ + + F S+ + TLI MYA CG + A +VF EM +++ WN++ +G + +G
Sbjct: 147 HALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNW 206
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
+ +F ++ + I+ + T V +L C ++ G ++ N L
Sbjct: 207 EEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELG-EWINRYVEEKGLKGNPTLITS 265
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+VD+ + GQ+D A L M + + W A+++G
Sbjct: 266 LVDMYAKCGQVDTARRLFDQMDRR-DVVAWSAMISG 300
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 291/552 (52%), Positives = 393/552 (71%), Gaps = 6/552 (1%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHD-FQLGVRSHSLIVKAG 60
IR S+ H + F++ + N P++ TFPF +K+ +R D G + H+ +K
Sbjct: 50 IRALSSSGLHLHVLRFHSHLPN----PSHLTFPFAIKSASRLPDPLTAGAQLHARSLKLP 105
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDI-PDKNVVSWTAIISGYINEGNLEEAINMF 119
+ V TSLLNLY CG L DA K FD++ + VSWTA+I+ Y++ G EAI +
Sbjct: 106 SHSNPHVLTSLLNLYARCGRLHDAQKAFDEMRQPPSTVSWTALITAYMDAGRGLEAIGVA 165
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R G++PDSF+ VRVLTAC ++ DL T + + + G NVFVAT+ VDLY KC
Sbjct: 166 RSAFASGVRPDSFTAVRVLTACARVADLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKC 225
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G M+KAR VFD+M KD+V+W +M+ GYASNG P+EAL++F+ MQ E ++P+ YT+ G L
Sbjct: 226 GEMDKARGVFDKMKNKDVVAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYTVAGAL 285
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SAC LGAL+LG ++ +E L NPVLGT LIDMYAKCG +A VF++M+++D +
Sbjct: 286 SACTRLGALDLGRRVVGMLQWDEVLGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDII 345
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
VWNA++ GL M G+ K+AF + GQ++K G+ N NTF+GLLC CTH GLV +GR++F +M
Sbjct: 346 VWNAMILGLGMTGHEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNM 405
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
++++ + P IEHYG MVDLL R+G L EAH+LI+ MPME NA+VWGALL GC++H+ DL
Sbjct: 406 TQLYHIRPRIEHYGIMVDLLSRAGLLQEAHQLIQDMPMEANAVVWGALLGGCKIHRNADL 465
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AEHVL QLI LEPWNSGNYV+LSNIYS S +W DAAK+R M KG++K+ SWVE+DG
Sbjct: 466 AEHVLKQLIQLEPWNSGNYVVLSNIYSNSGRWEDAAKLRLEMKAKGVEKVPASSWVELDG 525
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VHEF VGD SHPLS++IY+KLDEL ++KA G+ P+T+ V+FDIE EEK++ L HSEK
Sbjct: 526 KVHEFHVGDKSHPLSDQIYAKLDELGMEMKAMGYKPSTEVVMFDIENEEKEHTLVHHSEK 585
Query: 540 LALAFGLITTAP 551
+A+AF L+TT P
Sbjct: 586 IAIAFSLLTTEP 597
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/636 (46%), Positives = 411/636 (64%), Gaps = 32/636 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG + AI+FY M G P ++TFPF+LK+CA+ Q G + H ++K G
Sbjct: 103 MIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLG 162
Query: 61 LDCDEFVKTSLLNLYVHCGYLA-------------------------------DALKVFD 89
L+ D FV TSL+N+Y G L DA ++F+
Sbjct: 163 LESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFE 222
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP ++ VSW A+I+GY G EEA+ F+ + + P+ ++V VL+AC Q G L
Sbjct: 223 EIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLEL 282
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
W+ ++ + G G N+ + +L+D+Y+KCG+++KAR +F+ + EKDI+SW+ MI GY+
Sbjct: 283 GNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSH 342
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF-LSNPV 268
KEAL +F MQ+ N++P T V +L ACA LGAL+LG W +++++ L+N
Sbjct: 343 MNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTS 402
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
L T+LIDMYAKCG + A +VF MK K WNA++SGL+M+G+ +A +F Q+ G
Sbjct: 403 LWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG 462
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
+P+ TFVG+L C+HAGLV+ GRQ F+SM + ++P ++HYGCM+DLLGR+G DEA
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA 522
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
L+K+M M+P+ +WG+LL CR+H +L E L LEP N G YVLLSNIY+ +
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATA 582
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
+W+D A+IR+ + DKG++K+ GCS +EVD VVHEFLVGD H S+ IY LDE+ L
Sbjct: 583 GRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLL 642
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
+ AG VP T VL+D++EE K+ L+ HSEKLA+AFGLI+T P+ IRI KNLRVCG+CH
Sbjct: 643 EKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCH 702
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
AIKLISKI REII RD NRFH F +GSCSC D+W
Sbjct: 703 SAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 219/417 (52%), Gaps = 38/417 (9%)
Query: 46 FQLGVRSHSLIVKAGLDCDEFVKTSLLNL--YVHCGYLADALKVFDDIPDKNVVSWTAII 103
FQ + HS I+K GL +F + L+ G L+ AL +F+ I N W +I
Sbjct: 45 FQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMI 104
Query: 104 SGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG 163
G + AI+ + R+L G++P+S++ +L +C ++G K IHG+V + G
Sbjct: 105 RGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLE 164
Query: 164 RNVFVATSLVDLYAKCGNM-------------------------------EKARRVFDQM 192
+ FV TSL+++YA+ G + + ARR+F+++
Sbjct: 165 SDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEI 224
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
P +D VSW++MI GYA +G +EAL F M+R N+ P TMV VLSACA G+LELG
Sbjct: 225 PVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGN 284
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS-MN 311
W S++E + SN L LIDMY+KCG + +A +F + +KD + WN ++ G S MN
Sbjct: 285 WVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMN 344
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
Y K A +F ++++ ++PN TFV +L C + G +D G+ + + F
Sbjct: 345 SY-KEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSL 403
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAI-VWGALLAGCRLHKKTDLAEHVLNQL 427
+ ++D+ + G ++ A ++ M+P ++ W A+++G +H ++A + Q+
Sbjct: 404 WTSLIDMYAKCGNIEAAKQVFAG--MKPKSLGSWNAMISGLAMHGHANMALELFRQM 458
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/604 (46%), Positives = 397/604 (65%), Gaps = 3/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ + + + AI FY M +G P FTFP + K+C + G + H K G
Sbjct: 111 IIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLG 167
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +++ +L+N+Y +CG L A KVFD + +K+VVSW +I Y EAI +FR
Sbjct: 168 FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFR 227
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ +KP+ ++V VLTAC + DL TAK +H Y++E G G + + ++L+D+Y KCG
Sbjct: 228 RMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCG 287
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
AR +F++MPEK++ W+ MI G+ + +EAL +F MQ +K + TM +L
Sbjct: 288 CYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLI 347
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC LGALELG W ++E+ + + LGT L+DMYAKCG + A +VF+EM +KD +
Sbjct: 348 ACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMT 407
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ GL+M G A +F +++ ++P+ TFVG+L C+HAGLV+EG +FNSM
Sbjct: 408 WTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMP 467
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P IEHYGCMVD+LGR+G++ EA +LI++MPM P+ V LL+ CR+H +A
Sbjct: 468 NKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVA 527
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E QLI L+P N G YVLLSNIYS+ W A K+R +M ++ I+K GCS +EV GV
Sbjct: 528 ERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGV 587
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEF+ GD SHP S +IY LD++ +LK+AG+VP VLFD++E+EK+ L+ HSEKL
Sbjct: 588 VHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKL 647
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL++T P IR+ KNLRVC DCH A+K IS++ REIIVRD NRFH F +GSCSC
Sbjct: 648 AIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSC 707
Query: 601 KDFW 604
+DFW
Sbjct: 708 RDFW 711
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 187/360 (51%), Gaps = 7/360 (1%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNL-YVH-CGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ +++ L D F + ++ +H G L A VF+ IP+ + +II GY N+
Sbjct: 60 HAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKN 119
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+AI ++ ++ +GL PD F+ + +C G L K +H + + G + ++
Sbjct: 120 LPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQN 176
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+L+++Y+ CG + AR+VFD+M K +VSW++MI YA P EA+ +F M+ ++KP
Sbjct: 177 TLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKP 236
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
T+V VL+ACA LE +++ + VL + L+D+Y KCG A +F
Sbjct: 237 NEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLF 296
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+M +K+ WN +++G + + A +F +++ G++ + T LL CTH G ++
Sbjct: 297 NKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALE 356
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G+ + + + + +VD+ + G ++ A + + MP E + + W AL+ G
Sbjct: 357 LGKWLHVYIEKE-KIEVDVALGTALVDMYAKCGSIESAMRVFQEMP-EKDVMTWTALIVG 414
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 122/275 (44%), Gaps = 10/275 (3%)
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA--KCGNMEKARRVFDQMPEK 195
L CT + L K IH + + F A+ +V A G++ AR VF+Q+P
Sbjct: 47 LEKCTTMSQL---KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNP 103
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
+ +S+I+GY + P++A+ + M + L P+ +T + +C G L G
Sbjct: 104 TTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLH 160
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
+ F S+ + TL++MY+ CG + A KVF +M +K V W ++ +
Sbjct: 161 CHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPH 220
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A +F ++E ++PN T V +L C + ++ +Q + + +
Sbjct: 221 EAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDET-GIGFHTVLTSAL 279
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+D+ + G A +L MP E N W ++ G
Sbjct: 280 MDVYCKCGCYPLARDLFNKMP-EKNLFCWNIMING 313
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 281/635 (44%), Positives = 401/635 (63%), Gaps = 31/635 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+ D Q + Y M G P +TFPF+ K R+ + G + H ++K G
Sbjct: 110 MIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHG 169
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + FV T+L+ +Y+ CG L A VFD P +V++W IIS Y G EE+ +F
Sbjct: 170 LQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFL 229
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + + P + ++V VL+AC++L DL T K +H YV N+ + +++D+YA CG
Sbjct: 230 VMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCG 289
Query: 181 NMEKA-------------------------------RRVFDQMPEKDIVSWSSMIQGYAS 209
M+ A R FD+MPEKD VSW++MI GY
Sbjct: 290 EMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIR 349
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+ KEAL++F NMQ N+KP+ +TMV VL+ACA LGALELG W ++++RN+ ++ +
Sbjct: 350 SNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFV 409
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
LIDMY KCG + +A +FREM +D+ W A++ GL++NG+ + A +F + K I
Sbjct: 410 RNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASI 469
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
P+ T++G+L CTH GLVD+GR++F M+ + P I HYGC+VDLL R+G+L EA+
Sbjct: 470 LPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAY 529
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
E+I++MP++ N+IVWGALLAGCR+++++D+AE V+ Q++ LEP N YVLL NIY+A
Sbjct: 530 EVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACK 589
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
+WND ++R MM DKGI+K GCS +E++G VHEF+ GD SHP ++ I +KLD++ LK
Sbjct: 590 RWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLK 649
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
AG+ P V DI EE+K+ + HSEKLA+AFGLI + P IRI KNLR+C DCH
Sbjct: 650 LAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHN 709
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KL+SK+ RE+IVRD RFH F G CSCKD+W
Sbjct: 710 MAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 198/420 (47%), Gaps = 38/420 (9%)
Query: 24 EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY--L 81
+ F P +L+ C Q + H +K GL+ + ++ ++ Y
Sbjct: 33 KSFSPPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDF 89
Query: 82 ADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
A ++FD+IP+ N+ W +I GY + ++++ +L RG+KPD ++ +
Sbjct: 90 QYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGF 149
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
T+ L + +HG+V + G NVFV T+LV +Y CG ++ AR VFD P+ D+++W+
Sbjct: 150 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 209
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+I Y G +E+ +F M+ + + P T+V VLSAC+ L L G S+++
Sbjct: 210 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 269
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS------------ 309
+ SN VL +IDMYA CG M A +FR M ++D + W +VSG +
Sbjct: 270 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 329
Query: 310 --------------MNGYV-----KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
++GY+ K A +F ++ ++P+ T V +L C H G ++
Sbjct: 330 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALE 389
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G + R + ++D+ + G +D+A + + M + + W A++ G
Sbjct: 390 LGEWIRTYIDRNKIKNDLFVR-NALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMIVG 447
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 140/305 (45%), Gaps = 7/305 (2%)
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL--YAKCGNM 182
+ P + ++ +L C + L + +H + G N + ++ + G+
Sbjct: 33 KSFSPPTHPLISLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDF 89
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
+ ARR+FD++PE ++ W++MI+GY+ FP+ + ++ M R +KP+ YT +
Sbjct: 90 QYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGF 149
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
ALE G + ++ N + T L+ MY CG++ A VF D + WN
Sbjct: 150 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 209
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
++S + G + + +F +E + P T V +L C+ + G++ + +
Sbjct: 210 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 269
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ ++ M+D+ G++D A + +SM + I W +++G + D+A +
Sbjct: 270 KVESNLVLE-NAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGFTNLGEIDVARN 327
Query: 423 VLNQL 427
+++
Sbjct: 328 YFDKM 332
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 281/635 (44%), Positives = 401/635 (63%), Gaps = 31/635 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+ D Q + Y M G P +TFPF+ K R+ + G + H ++K G
Sbjct: 89 MIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHG 148
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + FV T+L+ +Y+ CG L A VFD P +V++W IIS Y G EE+ +F
Sbjct: 149 LQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFL 208
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + + P + ++V VL+AC++L DL T K +H YV N+ + +++D+YA CG
Sbjct: 209 VMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCG 268
Query: 181 NMEKA-------------------------------RRVFDQMPEKDIVSWSSMIQGYAS 209
M+ A R FD+MPEKD VSW++MI GY
Sbjct: 269 EMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIR 328
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+ KEAL++F NMQ N+KP+ +TMV VL+ACA LGALELG W ++++RN+ ++ +
Sbjct: 329 SNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFV 388
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
LIDMY KCG + +A +FREM +D+ W A++ GL++NG+ + A +F + K I
Sbjct: 389 RNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASI 448
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
P+ T++G+L CTH GLVD+GR++F M+ + P I HYGC+VDLL R+G+L EA+
Sbjct: 449 LPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAY 508
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
E+I++MP++ N+IVWGALLAGCR+++++D+AE V+ Q++ LEP N YVLL NIY+A
Sbjct: 509 EVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACK 568
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
+WND ++R MM DKGI+K GCS +E++G VHEF+ GD SHP ++ I +KLD++ LK
Sbjct: 569 RWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLK 628
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
AG+ P V DI EE+K+ + HSEKLA+AFGLI + P IRI KNLR+C DCH
Sbjct: 629 LAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHN 688
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KL+SK+ RE+IVRD RFH F G CSCKD+W
Sbjct: 689 MAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 198/420 (47%), Gaps = 38/420 (9%)
Query: 24 EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY--L 81
+ F P +L+ C Q + H +K GL+ + ++ ++ Y
Sbjct: 12 KSFSPPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDF 68
Query: 82 ADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
A ++FD+IP+ N+ W +I GY + ++++ +L RG+KPD ++ +
Sbjct: 69 QYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGF 128
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
T+ L + +HG+V + G NVFV T+LV +Y CG ++ AR VFD P+ D+++W+
Sbjct: 129 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 188
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+I Y G +E+ +F M+ + + P T+V VLSAC+ L L G S+++
Sbjct: 189 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 248
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS------------ 309
+ SN VL +IDMYA CG M A +FR M ++D + W +VSG +
Sbjct: 249 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 308
Query: 310 --------------MNGYV-----KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
++GY+ K A +F ++ ++P+ T V +L C H G ++
Sbjct: 309 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALE 368
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G + R + ++D+ + G +D+A + + M + + W A++ G
Sbjct: 369 LGEWIRTYIDRNKIKNDLFVR-NALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMIVG 426
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 140/305 (45%), Gaps = 7/305 (2%)
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL--YAKCGNM 182
+ P + ++ +L C + L + +H + G N + ++ + G+
Sbjct: 12 KSFSPPTHPLISLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDF 68
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
+ ARR+FD++PE ++ W++MI+GY+ FP+ + ++ M R +KP+ YT +
Sbjct: 69 QYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGF 128
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
ALE G + ++ N + T L+ MY CG++ A VF D + WN
Sbjct: 129 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 188
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
++S + G + + +F +E + P T V +L C+ + G++ + +
Sbjct: 189 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 248
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ ++ M+D+ G++D A + +SM + I W +++G + D+A +
Sbjct: 249 KVESNLVLE-NAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGFTNLGEIDVARN 306
Query: 423 VLNQL 427
+++
Sbjct: 307 YFDKM 311
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/638 (43%), Positives = 409/638 (64%), Gaps = 34/638 (5%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR + S+ + Q + F + P FTFPF++KA + + G H +++K
Sbjct: 106 LIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKV 165
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L D F+ SL++ Y CG L +VF +IP ++VVSW ++I+ ++ G EEA+ +F
Sbjct: 166 LLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELF 225
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ + + +KP+ ++V VL+AC + D +W+H Y+ G ++ ++ +++D+Y KC
Sbjct: 226 QEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKC 285
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYA------------------------------- 208
G++E A+R+FD+MPEKDIVSW++M+ GYA
Sbjct: 286 GSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYE 345
Query: 209 SNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
G PKEAL++F+ +Q + KP+ T+V LSACA LGA++LG W ++++ N
Sbjct: 346 QCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNC 405
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMY KCG + +A VF ++ KD VW+A+++GL+M+G+ K A +F ++++
Sbjct: 406 HLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQED 465
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
++PN TF +LC C+H GLV+EGR FFN M V+ + P ++HY CMVD+LGR+G L+E
Sbjct: 466 KVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEE 525
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A ELI+ MPM P A VWGALL C +H+ LAE +QLI LEP N G YVLLSNIY+
Sbjct: 526 AVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAK 585
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ KW+ + +R +M D G++K GCS +EVDG+VHEFLVGDNSHP ++KIY+KLDE+ +
Sbjct: 586 AGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVAR 645
Query: 508 LKAAGFVPTTDHVLFDIEEEE-KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
L+ G+VP H+L +EEE+ K+ L HSEKLA+AFGLI+T IRI KNLRVCGD
Sbjct: 646 LETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGD 705
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CH KL+SK+ REI++RD RFH F EG CSC D+W
Sbjct: 706 CHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 197/397 (49%), Gaps = 37/397 (9%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ +++ GL D F + L+ + L A +VFD IP N+ +W +I Y +
Sbjct: 55 HAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSS 114
Query: 111 NLEEAINMFRRLLHRGLK-PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
N +++ +F R+LH+ PD F+ ++ A ++L +L T K HG V + G +VF+
Sbjct: 115 NPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFIL 174
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
SL+ YAKCG + RVF +P +D+VSW+SMI + G P+EAL++F M+ +N+K
Sbjct: 175 NSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVK 234
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P TMVGVLSACA E G W S++ERN + L ++DMY KCG + A ++
Sbjct: 235 PNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRL 294
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL---------------EKCG------ 328
F +M +KD V W ++ G + G A G+F + E+CG
Sbjct: 295 FDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEAL 354
Query: 329 -----------IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
+P+ T V L C G +D G + + + + ++D
Sbjct: 355 ELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLG-GWIHVYIKKQGMKLNCHLTTSLID 413
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + G L +A + S+ + + VW A++AG +H
Sbjct: 414 MYCKCGDLQKALMVFHSVERK-DVFVWSAMIAGLAMH 449
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 282/638 (44%), Positives = 407/638 (63%), Gaps = 34/638 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG S++ A+E+Y M + G P +TFP + K+C + G + H+ ++K G
Sbjct: 99 MIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLG 158
Query: 61 LDCDEFVKTSLLNLYVHCG-------------------------------YLADALKVFD 89
L+ + FV TSL+N+Y G +L +A ++FD
Sbjct: 159 LEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFD 218
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD-LS 148
+IP ++VVSW A+ISGY G +EEA+ F + + P+ +++ VL+AC Q G L
Sbjct: 219 EIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQ 278
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
W+ ++ + G G N+ + L+D+Y KCG++E+A +F+++ +K++VSW+ MI GY
Sbjct: 279 LGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYT 338
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN-EFLSNP 267
KEAL +F M + N+ P T + +L ACA+LGAL+LG W +++++N + + N
Sbjct: 339 HMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNT 398
Query: 268 V-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
V L T+LIDMYAKCG +A A ++F M K WNA++SG +M+G+ A G+F ++
Sbjct: 399 VALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTS 458
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLD 386
G P+ TFVG+L C HAGL+ GR++F+SM + + ++P + HYGCM+DL GR+G D
Sbjct: 459 EGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFD 518
Query: 387 EAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYS 446
EA L+K+M M+P+ +W +LL CR+H++ +LAE V L LEP N YVLLSNIY+
Sbjct: 519 EAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYA 578
Query: 447 ASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELAT 506
+ +W D AKIR+ + D ++K+ GCS +EVD VVHEFLVGD HP S +IY LDE+
Sbjct: 579 GAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDM 638
Query: 507 KLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
+L+ AGFVP T VL+D++EE K+ L+ HSEKLA+AFGLI+T P IRI KNLRVCG+
Sbjct: 639 RLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGN 698
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CH A KLISKI REII RD NRFH F +GSCSCKD+W
Sbjct: 699 CHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 204/412 (49%), Gaps = 36/412 (8%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHC--GYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
HS I+K GL F + L+ G L+ AL +F I + N V W +I G +
Sbjct: 48 HSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSE 107
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+ A+ + ++ G +P+ ++ + +CT++ K +H +V + G N FV T
Sbjct: 108 SPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHT 167
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF------------------ 212
SL+++YA+ G + AR VFD+ +D VS++++I GYAS GF
Sbjct: 168 SLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVS 227
Query: 213 -------------PKEALDMFYNMQRENLKPEYYTMVGVLSACASLG-ALELGVWASSFM 258
+EA+ F M+R + P TM+ VLSACA G +L+LG W S++
Sbjct: 228 WNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWI 287
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
E SN L LIDMY KCG + +A +F +++DK+ V WN ++ G + K A
Sbjct: 288 EDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEAL 347
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-VFSLTPMIEHYGCMVD 377
G+F ++ + I PN TF+ +L C + G +D G+ + + + S+ + + ++D
Sbjct: 348 GLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLID 407
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+ + G L A + M + A W A+++G +H TD A + +++ +
Sbjct: 408 MYAKCGDLAVAKRIFDCMNTKSLA-TWNAMISGFAMHGHTDTALGLFSRMTS 458
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 270/604 (44%), Positives = 398/604 (65%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG +A+ + M + FTF VLKAC+R + G + H+LI+K+G
Sbjct: 92 MIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSG 151
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+EFV+ +L+ +Y +CG + A VFD +P++++V+W +++SGY G +E + +FR
Sbjct: 152 FKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFR 211
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L ++ D +++ VL AC +L +L + I Y+ G RN + TSL+D+YAKCG
Sbjct: 212 KILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCG 271
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR++FD+M ++D+V+WS+MI GYA KEAL++F+ MQ+ N+ P TMV VL
Sbjct: 272 QVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLY 331
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+CA LGA E G W ++++ + LGT LID YAKCG + ++ +VF+EM K+
Sbjct: 332 SCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFT 391
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ GL+ NG K+A F + + ++PN TF+G+L C+HA LVD+GR FNSM
Sbjct: 392 WTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMR 451
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R F + P IEHYGCMVD+LGR+G L+EA++ I +MP PNA+VW LLA CR HK ++A
Sbjct: 452 RDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMA 511
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E L + LEP +SG+Y+LLSN Y+ + DA ++RS++ +K I+KI GCS +E+DGV
Sbjct: 512 EKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGV 571
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEF D H S++I+ LD++ ++K G+VP TD + EEE K+ ++ HSEKL
Sbjct: 572 VHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKL 631
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+GLI T+P+ IRI+KNLR+C DCH A K IS++ R IIVRD NRFH F +G CSC
Sbjct: 632 AIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSC 691
Query: 601 KDFW 604
D+W
Sbjct: 692 NDYW 695
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 194/380 (51%), Gaps = 11/380 (2%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLD---CDEFVKTSLLNLYVHCGYLADALKVFDDI 91
+L+ C D Q V +H L + LD + ++++ L L Y AL +F+ I
Sbjct: 26 LILQQCKTPKDLQ-QVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDY---ALSIFNHI 81
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
++ +I G + + + A+ +F+++ + ++ D F+ VL AC+++ L +
Sbjct: 82 DKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGE 141
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+H + ++G N FV +L+ +YA CG + AR VFD MPE+ IV+W+SM+ GY NG
Sbjct: 142 QVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNG 201
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
E + +F + ++ + TM+ VL AC L LE+G ++ N L T
Sbjct: 202 LWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTT 261
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
+LIDMYAKCG++ A K+F EM +D V W+A++SG + K A +F +++K + P
Sbjct: 262 SLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYP 321
Query: 332 NGNTFVGLLCGCTHAGLVDEGR-QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
N T V +L C G + G+ F + LT + ++D + G +D + E
Sbjct: 322 NEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQ--LIDFYAKCGYIDRSVE 379
Query: 391 LIKSMPMEPNAIVWGALLAG 410
+ K M + N W AL+ G
Sbjct: 380 VFKEMSFK-NVFTWTALIQG 398
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/635 (43%), Positives = 396/635 (62%), Gaps = 31/635 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI+G+ C A+ Y M G +P +T+PF+LK R+ + G H IVK G
Sbjct: 90 MIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLG 149
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV+ +L++LY G ++ A VFD +VV+W +ISGY +E++ +F
Sbjct: 150 FSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFD 209
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + P S ++V VL+AC++L DL+ K +H YV + + +L+D+YA CG
Sbjct: 210 EMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACG 269
Query: 181 NMEKA-------------------------------RRVFDQMPEKDIVSWSSMIQGYAS 209
+M+ A R FD+MPE+D VSW++MI GY
Sbjct: 270 DMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQ 329
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
KE L +F MQ N+KP+ +TMV +L+ACA LGALELG W +++++NE + +
Sbjct: 330 VNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFV 389
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
G LIDMY CG + +A ++F M +D++ W AV+ GL++NGY + A +F Q+ K I
Sbjct: 390 GNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASI 449
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
P+ T +G+LC CTH+G+VD+G++FF M+ + P + HYGCMVDLLGR+G L EAH
Sbjct: 450 TPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAH 509
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
E+IK+MP++PN+IVWG+LL CR+H+ ++AE Q++ LEP N YVLL NIY+A +
Sbjct: 510 EVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACN 569
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
+W ++R +M D+GI+K GCS +E++G VHEF+ GD HP S++IYSKLDE++ LK
Sbjct: 570 RWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLK 629
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
AG+ P T V DI EEEK+ + HSEKLA+AFGLI++ P IRI KNLR+C DCH
Sbjct: 630 FAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHY 689
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KL+SK+ RE+IVRD RFH F GSCSCKD+W
Sbjct: 690 VAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 193/410 (47%), Gaps = 37/410 (9%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
HS + GL + V ++ G + A VFD +P N W +I GY G
Sbjct: 39 HSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVG 98
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
A++M+ +L RG+ PD ++ +L T+ + + +H ++ + G NVFV
Sbjct: 99 CPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQN 158
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+L+ LY+ G + AR VFD+ + D+V+W+ MI GY + E++ +F M+R + P
Sbjct: 159 ALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLP 218
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
T+V VLSAC+ L L +G +++ + VL LIDMYA CG M A +F
Sbjct: 219 SSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIF 278
Query: 291 REMKDKDQVVWNAVVSGLS--------------------------MNGYVKV-----AFG 319
MK +D + W A+V+G + ++GY++V
Sbjct: 279 DNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLS 338
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-VFSLTPMIEHYGCMVDL 378
+F +++ I+P+ T V +L C H G ++ G + + + + + ++D+
Sbjct: 339 LFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGN--ALIDM 396
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
G +++A + +MP + I W A++ G ++ + A + +Q++
Sbjct: 397 YFNCGNVEKAIRIFNAMPHR-DKISWTAVIFGLAINGYGEEALDMFSQML 445
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 131/293 (44%), Gaps = 7/293 (2%)
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK--CGNMEKARRVFDQMPE 194
++ C + L K IH G N V ++ K G+ME AR VFD MP
Sbjct: 25 LIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPG 81
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
+ W++MI+GY+ G P A+ M+ M + P+ YT +L A++ G
Sbjct: 82 PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGREL 141
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
+ + F SN + LI +Y+ G ++ A VF D V WN ++SG + +
Sbjct: 142 HDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQF 201
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
+ +F ++E+ + P+ T V +L C+ ++ G++ + + + P+
Sbjct: 202 DESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYV-KDLKIEPVRVLENA 260
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
++D+ G +D A + +M + I W A++ G + LA + +++
Sbjct: 261 LIDMYAACGDMDTALGIFDNMKSR-DVISWTAIVTGFTNLGQVGLARNYFDKM 312
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 277/605 (45%), Positives = 394/605 (65%), Gaps = 4/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG + Q A+ FY M +G +P +TFP + K+C + G + H K G
Sbjct: 59 IIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLG 115
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + + +L+N+Y +CG L A KVFD + DK VVSW +I + EA+ +F
Sbjct: 116 FASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFD 175
Query: 121 RLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R++ +KP+ ++V VLTAC + DL+ K IH Y++E G GR+V + T L+D+Y KC
Sbjct: 176 RMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKC 235
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ AR +FD+ EK++ SW+ MI G+ + +EAL +F MQ + +K + TM +L
Sbjct: 236 GCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLL 295
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC LGALELG W +++++ + LGT L+DMYAKCG + A +VF EM +KD +
Sbjct: 296 LACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVM 355
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W A++ GL+M G + A F ++ G++P+ TFVG+L C+HAG VDEG FNSM
Sbjct: 356 TWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSM 415
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
S + + P IEHYG +VD+LGR+G++ EA ELIKSMPM P+ V G LL CR+H +
Sbjct: 416 SDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEA 475
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE QL+ ++P++SG YVLLSNIY +S KW +A + R +M ++G++K GCS +EV G
Sbjct: 476 AERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHG 535
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VVHEF+ GD+SH S +I L+++ +KLK AG+VP VLFD+ EEEK+ L+ HSEK
Sbjct: 536 VVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEK 595
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL++T+ IR+ KNLR+C DCH A KLISK+ REIIVRD NRFH F +G+CS
Sbjct: 596 LAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCS 655
Query: 600 CKDFW 604
C+ FW
Sbjct: 656 CRGFW 660
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 191/361 (52%), Gaps = 8/361 (2%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNL--YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ +++ GL D F + ++ G L A VF IP+ + +II G ++
Sbjct: 8 HAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKN 67
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+EA+ ++ ++ +GL PD ++ + +C + S K IH + + G + +
Sbjct: 68 LHQEALLFYQEMMVQGLIPDRYTFPSLFKSCR---NSSEGKQIHCHSTKLGFASDTYAQN 124
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLK 229
+L+++Y+ CG + AR+VFD+M +K +VSW++MI +A P EA+ +F M + EN+K
Sbjct: 125 TLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVK 184
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P T+V VL+ACA L + +++ + F + VL T L+D+Y KCG + A +
Sbjct: 185 PNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDL 244
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F + ++K+ WN +++G + + A +F +++ GI+ + T LL CTH G +
Sbjct: 245 FDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGAL 304
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ G+ + ++ + + + +VD+ + G ++ A ++ MP E + + W AL+
Sbjct: 305 ELGK-WLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP-EKDVMTWTALIL 362
Query: 410 G 410
G
Sbjct: 363 G 363
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 6/203 (2%)
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYA--KCGNMEKARRVFDQMPEKDIVSWSSMI 204
+S K IH + G + F A+ +V + + G+++ AR VF Q+P + +S+I
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
+G +EAL + M + L P+ YT + +C + G + F
Sbjct: 61 RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFA 117
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
S+ TL++MY+ CG + A KVF +M+DK V W ++ + A +F ++
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177
Query: 325 EKC-GIQPNGNTFVGLLCGCTHA 346
K ++PN T V +L C A
Sbjct: 178 MKSENVKPNEVTLVNVLTACARA 200
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 265/568 (46%), Positives = 380/568 (66%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
LK+C+R +G + VK GL D FV +SL+++Y CG +A A VFD + V
Sbjct: 127 LKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGV 186
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
V W AI++ Y+ G+ E + MF+ +L G+ D ++V V+TAC ++GD KW+ G+
Sbjct: 187 VMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGH 246
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
V+E G RN + T+L+D+YAKCG + KARR+FD M +D+V+WS+MI GY +EA
Sbjct: 247 VDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREA 306
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
L +F MQ ++P TMV VLSACA LGALE G W S++ R +LGT L+D
Sbjct: 307 LGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDF 366
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
YAKCG + A + F M K+ W A++ G++ NG + A +F + + GI+P TF
Sbjct: 367 YAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTF 426
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
+G+L C+H+ LV+EGR+ F+SM+R + + P +EHYGCMVDLLGR+G +DEA++ I++MP
Sbjct: 427 IGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMP 486
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAK 456
+EPNA++W ALL+ C +H+ + E L Q+I+L P +SG+YVLLSNIY+++ +W DAA
Sbjct: 487 IEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAM 546
Query: 457 IRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
+R M D+GI+K GCS +E+DGVV EF D+ HP +IY K++E+ ++K AG+VP
Sbjct: 547 VRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPN 606
Query: 517 TDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISK 576
T V ++EE EK+ ++ HSEKLA+AFGL+ P IR++KNLRVC DCH A KLISK
Sbjct: 607 TADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISK 666
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ REI+VRD N FH F +G+CSC D+W
Sbjct: 667 VYDREIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 174/322 (54%), Gaps = 6/322 (1%)
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLH--RGLKPDSFSIVRVLTACTQLGDLST 149
P + + ++ +++ G+ E+A+++F +LH D + L +C+++ L
Sbjct: 79 PPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDV 138
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ + Y + G + FV +SL+ +YA CG++ AR VFD E +V W++++ Y
Sbjct: 139 GRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLK 198
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
NG E ++MF M + + T+V V++AC +G +LG W + ++ NP L
Sbjct: 199 NGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKL 258
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
T L+DMYAKCG + +A ++F M+ +D V W+A++SG + + A G+F +++ +
Sbjct: 259 VTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARV 318
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEA 388
+PN T V +L C G ++ G+ + + R SLT ++ +VD + G +D+A
Sbjct: 319 EPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILG--TALVDFYAKCGCIDDA 376
Query: 389 HELIKSMPMEPNAIVWGALLAG 410
E +SMP++ N+ W AL+ G
Sbjct: 377 VEAFESMPVK-NSWTWTALIKG 397
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 173/326 (53%), Gaps = 2/326 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ ++ N + +E + M G T V+ AC R D +LG + + G
Sbjct: 192 IVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEG 251
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + + T+L+++Y CG + A ++FD + ++VV+W+A+ISGY EA+ +F
Sbjct: 252 LARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFS 311
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ ++P+ ++V VL+AC LG L T KW+H YV + T+LVD YAKCG
Sbjct: 312 EMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCG 371
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A F+ MP K+ +W+++I+G A+NG +EAL++F +M+ ++P T +GVL
Sbjct: 372 CIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLM 431
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ +E G M R+ + V ++D+ + G + +A + R M + +
Sbjct: 432 ACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNA 491
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQL 324
V+W A++S +++ V + Q+
Sbjct: 492 VIWRALLSSCAVHRNVGIGEEALKQI 517
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 280/637 (43%), Positives = 406/637 (63%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG + A++ Y M + G LP ++TFPF+LK+CA+ F+ G + H ++K G
Sbjct: 74 MFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFG 133
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKV-------------------------------FD 89
D D ++ TSL+++YV G L DA KV FD
Sbjct: 134 FDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFD 193
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A ISGY GN +EA+ +F++++ ++PD ++V VL+AC Q G +
Sbjct: 194 EIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIEL 253
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++N+ G G N+ + +L+DLY+KCG +E A +F + KD++SW+++I GY
Sbjct: 254 GRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTH 313
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME-RNEFLSNPV 268
KEAL +F +M R KP TM+ +LSACA LGA+++G W +++ R + ++N
Sbjct: 314 MNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNAS 373
Query: 269 -LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMYAKCG + A +VF M ++ WNA++ G +M+G AF +F ++ K
Sbjct: 374 SLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKN 433
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI+P+ TFVGLL C+H+G++D GR F SM+R + L P +EHYGCM+DL G SG E
Sbjct: 434 GIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKE 493
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A ++I +M MEP+ ++W +LL C++H +L E LI +EP N G+YVLLSNIY+
Sbjct: 494 AEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYAT 553
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WN+ AK R+++ DKG++K+ GCS +E+D VVHEF++GD HP + +IY L+E+
Sbjct: 554 AERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 613
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRVC +C
Sbjct: 614 LEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 673
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
HEA KLISKI REII RD RFH F +G CSC D+W
Sbjct: 674 HEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 206/410 (50%), Gaps = 36/410 (8%)
Query: 53 HSLIVKAGLDCDEFVKTSLLN---LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINE 109
H+ ++K GL + + LL L H L A+ VFD I + ++ W + G+
Sbjct: 22 HAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHALS 81
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+ A+ ++ ++ GL P+S++ +L +C + + +HG V + G ++++
Sbjct: 82 SDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIH 141
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG-----------FP----- 213
TSL+ +Y + G +E A++V D+ +D+VS++++I GYAS G P
Sbjct: 142 TSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVV 201
Query: 214 ---------------KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
KEAL++F M + N++P+ TMV VLSACA G++ELG S++
Sbjct: 202 SWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWI 261
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ F N + LID+Y+KCG + AC +F+ + +KD + WN ++ G + K A
Sbjct: 262 NDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEAL 321
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMVD 377
+F + + G +PN T + +L C H G +D GR + R+ +T ++D
Sbjct: 322 LLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 381
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ + G ++ A ++ SM + + W A++ G +H + + A + +++
Sbjct: 382 MYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 430
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/637 (43%), Positives = 401/637 (62%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG + A++ Y M + G LP ++TFPF+LK+CA+ F+ G + H ++K G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
D D FV TSL+++YV G L DA KVFD
Sbjct: 165 YDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFD 224
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+ISGY GN +EA+ +F+ ++ ++PD ++V V++AC Q G +
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIEL 284
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++++ G G N+ + SL+DLY+KCG +E A +F+ + KD++SW+++I GY
Sbjct: 285 GRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTH 344
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER--NEFLSNP 267
KEAL +F M R +P TM+ +L ACA LGA+++G W ++++ +
Sbjct: 345 MNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNAS 404
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMYAKCG + A +VF + K WNA++ G +M+G AF +F ++ K
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKI 464
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI+P+ TFVGLL C+ +G++D GR F +M++ + +TP +EHYGCM+DLLG SG E
Sbjct: 465 GIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKE 524
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E+I +M MEP+ ++W +LL C++ +L E LI +EP N G YVLLSNIY+
Sbjct: 525 AEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYAT 584
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WN+ AKIR+++ DKG++K+ GCS +E+D VVHEF++GD HP + +IY L+E+
Sbjct: 585 AGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 644
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRVC +C
Sbjct: 645 LEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 704
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
HEA KLISKI REII RD RFH F +G CSC D+W
Sbjct: 705 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 281/639 (43%), Positives = 402/639 (62%), Gaps = 35/639 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR ++ ++ M + G P + TFP + K+CA+ + H+ +K
Sbjct: 98 LIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLA 157
Query: 61 LDCDEFVKTSLLNLY-------------------------------VHCGYLADALKVFD 89
L V TSL+++Y V G++ DA ++FD
Sbjct: 158 LHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFD 217
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+I+GY+ G EEA+ F R+ + P+ ++V VL+AC L L
Sbjct: 218 EIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLEL 277
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
KWI +V + G G+N+ + +LVD+Y+KCG + AR++FD M +KD++ W++MI GY
Sbjct: 278 GKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCH 337
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN----EFLS 265
+EAL +F M REN+ P T + VL ACASLGAL+LG W +++++N ++
Sbjct: 338 LSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVN 397
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
N L T++I MYAKCG + A +VFR M + WNA++SGL+MNG+ + A G+F ++
Sbjct: 398 NVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMI 457
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
G QP+ TFVG+L CT AG V+ G ++F+SM++ + ++P ++HYGCM+DLL RSG+
Sbjct: 458 NEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKF 517
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
DEA L+ +M MEP+ +WG+LL CR+H + + E+V +L LEP NSG YVLLSNIY
Sbjct: 518 DEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIY 577
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ + +W+D AKIR+ + DKG++K+ GC+ +E+DGVVHEFLVGD HP SE I+ LDE+
Sbjct: 578 AGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVD 637
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
L+ GFVP T VL+D++EE K+ L HSEKLA+AFGLI+T P IRI KNLRVC
Sbjct: 638 RLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCR 697
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+CH A KLISKI REII RD NRFH F +G CSC D W
Sbjct: 698 NCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 201/417 (48%), Gaps = 45/417 (10%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGY-----LADALKVFDDIPDK--NVVSWTAIISG 105
HSLI+K+GL F ++ L+ C L+ AL +F I + N+ W +I
Sbjct: 45 HSLIIKSGLHNTLFAQSKLIEF---CALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101
Query: 106 YINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+ ++++F ++LH GL P+S + + +C + AK +H + + +
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLH 161
Query: 166 VFVATSLVDLYAKCGNM-------------------------------EKARRVFDQMPE 194
V TSL+ +Y++ G + + ARR+FD++P
Sbjct: 162 PHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPA 221
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
KD+VSW++MI GY +G +EAL F MQ ++ P TMV VLSAC L +LELG W
Sbjct: 222 KDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWI 281
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
S++ F N L L+DMY+KCG + A K+F M+DKD ++WN ++ G
Sbjct: 282 GSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLY 341
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH--- 371
+ A +F + + + PN TF+ +L C G +D G+ + + T + +
Sbjct: 342 EEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSL 401
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ ++ + + G ++ A ++ +SM A W A+++G ++ + A + ++I
Sbjct: 402 WTSIIVMYAKCGCVEVAEQVFRSMGSRSLA-SWNAMISGLAMNGHAERALGLFEEMI 457
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 263/577 (45%), Positives = 381/577 (66%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P T LK+C+R +G + VK GL D FV +SL+++Y C +A A +
Sbjct: 117 PDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLL 176
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD + + VV W AII+ Y+ GN E + MF+ +L G+ D ++V V+TAC ++GD
Sbjct: 177 FDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDA 236
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
KW+ YV+E G RN + T+L+D+YAKCG + KARR+FD M +D+V+WS+MI GY
Sbjct: 237 KLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGY 296
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+EAL +F MQ ++P TMV VLSACA LGALE G W S++ R
Sbjct: 297 TQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTI 356
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+LGT L+D YAKCG + A + F M K+ W A++ G++ NG + A +F + K
Sbjct: 357 ILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKA 416
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
I+P TF+G+L C+H+ LV+EGR+ F+SM++ + + P EHYGC+VDLLGR+G +DE
Sbjct: 417 SIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDE 476
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A++ I++MP+EPNA++W ALL+ C +HK ++ E L Q+++L P +SG+Y+LLSNIY++
Sbjct: 477 AYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYAS 536
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+W +AA IR M D+GI+K GCS +E+DGVV EF D+ HP ++IY K++E+ +
Sbjct: 537 VGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDR 596
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
+K AG++P T V +++E EK+ ++ HSEKLA+AFGL+ P IR++KNLRVC DC
Sbjct: 597 IKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDC 656
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A KLISK+ REI+VRD NRFH F +G+CSC D+W
Sbjct: 657 HSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 176/326 (53%), Gaps = 2/326 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I ++ N + +E + M G T V+ AC R D +LG + + G
Sbjct: 191 IITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKG 250
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + + T+L+++Y CG L A ++FD + ++VV+W+A+ISGY EA+ +F
Sbjct: 251 LVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFS 310
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ ++P+ ++V VL+AC LG L T KW+H Y+ + + T+LVD YAKCG
Sbjct: 311 EMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCG 370
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A F+ MP K+ +W+++I+G A+NG +EAL++F +M++ +++P T +GVL
Sbjct: 371 CIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLM 430
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ +E G M ++ + ++D+ + G + +A + R M + +
Sbjct: 431 ACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNA 490
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQL 324
V+W A++S +++ V++ Q+
Sbjct: 491 VIWRALLSSCAVHKNVEIGEEALKQI 516
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/605 (43%), Positives = 388/605 (64%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR F+ + A+ + M ++ + P T +K+C+R D +G + K
Sbjct: 141 LIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKR 200
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D+FV SL+++Y CG + A +F + K V++W A+I+GY+ G+ +E + MF
Sbjct: 201 GFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMF 260
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +L D +++ V TAC +LGD + +WI Y E G R+ +AT+LVD+YAKC
Sbjct: 261 KGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKC 320
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++KARR+FD+M +D+V+WS+MI GY + +EAL +F MQ + P TMV VL
Sbjct: 321 GELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVL 380
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACA LGALE G W S++ R + +LGT L+D YAKCG + A K F M ++
Sbjct: 381 SACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTW 440
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W A++ G++ NG + A +F + + I+P TF+G+L C+H LV+EGR+ F SM
Sbjct: 441 TWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSM 500
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
++ + + P IEHYGCMVDLLGR+G +DEA++ I++MP+EPNA+VW ALL+ C +HK ++
Sbjct: 501 TQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEI 560
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E L Q++ L+P +SGNY+LLSN Y++ +W +AA +R M +KG++KI GCS +E++G
Sbjct: 561 GEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEG 620
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+ EF D+ HP +IY K+ E+ +K G++P T D++E EKQ ++ HSEK
Sbjct: 621 TIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEKQVSVSHHSEK 680
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL+ + P IR++KNLRVC DCH A KLISK+ REIIVRD NRFH F +G CS
Sbjct: 681 LAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNRFHHFKDGLCS 740
Query: 600 CKDFW 604
C D+W
Sbjct: 741 CNDYW 745
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/633 (43%), Positives = 400/633 (63%), Gaps = 33/633 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG + A+ Y M + G +P ++TFPF+LKACA+ F+ G + H ++K G
Sbjct: 74 MFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLG 133
Query: 61 LDCDEFVKTSLLNLYVHCG-------------------------------YLADALKVFD 89
D D +V TSL+ +YV G Y+ A K+FD
Sbjct: 134 CDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFD 193
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+ISGY GN +EA+ +F+ ++ +KPD ++V VL+AC Q +
Sbjct: 194 EIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIEL 253
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++++ G G N+ + +L+DLY KCG +E A +F+ + KD++SW+++I GY
Sbjct: 254 GRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTH 313
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME-RNEFLSNPV 268
KEAL +F M R P TM+ +L ACA LGA+++G W +++ R + +SNP
Sbjct: 314 MNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPS 373
Query: 269 -LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMYAKCG + A +VF M ++ WNA++ G +M+G AF +F ++ K
Sbjct: 374 SLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKD 433
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI+P+ TFVGLL C+H+G++D GR F SM+ + +TP +EHYGCM+DLLG SG E
Sbjct: 434 GIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKE 493
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E+I SM M+P+ ++W +LL C++H +L E LI +EP NSG+YVLLSNIY+
Sbjct: 494 AEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYAT 553
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WN+ AK R+++ DKG++K+ GCS +E+D VVHEF++GD HP + +IY L+E+
Sbjct: 554 AGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVL 613
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRVC +C
Sbjct: 614 LEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 673
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
HEA KLISKI REII RD RFH F +G CSC
Sbjct: 674 HEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/638 (42%), Positives = 402/638 (63%), Gaps = 34/638 (5%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR F S+ Q + F + P ++TFPFV+KA G H +++KA
Sbjct: 101 LIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKA 160
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D F+ SL++ Y G L A VF I +K++VSW ++ISG++ G+ EEA+ +F
Sbjct: 161 SFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLF 220
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+R+ +P+ ++V VL+AC + DL +W Y+ G N+ ++ +++D+Y KC
Sbjct: 221 KRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKC 280
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYA------------------------------- 208
G++E ARR+FD+M EKDIVSW++MI GYA
Sbjct: 281 GSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQ 340
Query: 209 SNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
NG PKEAL +F +Q +N KP T+ L+ACA LGA++LG W ++++ N
Sbjct: 341 QNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNF 400
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ T+LIDMY+KCG + +A +VF ++ +D VW+A+++GL+M+G+ + A +F ++++
Sbjct: 401 HITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQET 460
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
++PN TF LLC C+H+GLVDEGR FFN M V+ + P +HY CMVD+LGR+G L+E
Sbjct: 461 KVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEE 520
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A ELI+ MP+ P+A VWGALL CR++ +LAE ++L+ + N G YVLLSNIY+
Sbjct: 521 AVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAK 580
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ KW+ +++R M G++K GCS +EV+G++HEFLVGDNSHPLS +IYSKLDE+ +
Sbjct: 581 AGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVAR 640
Query: 508 LKAAGFVPTTDHVLFDIEEEE-KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
+K+ G+V H+L +EEE K++ L HSEKLA+A+GLI P IRI KNLRVCGD
Sbjct: 641 IKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGD 700
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CH KLISK+ R+I++RD RFH F G+CSC D+W
Sbjct: 701 CHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 211/427 (49%), Gaps = 58/427 (13%)
Query: 32 TFPFVLKACA-REHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY-----LADAL 85
T P ++ CA ++H QL H+ +++ GL D S L+ C L A
Sbjct: 32 TVPILIDKCANKKHLKQL----HAHMLRTGLFFD---PPSATKLFTACALSSPSSLDYAC 84
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK-PDSFSIVRVLTACTQL 144
KVFD IP N+ +W +I + + + + +F ++LH + P+S++ V+ A T++
Sbjct: 85 KVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEV 144
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
L + IHG V +A G ++F++ SL+ Y+ G+++ A VF ++ EKDIVSW+SMI
Sbjct: 145 SSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMI 204
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G+ G P+EAL +F M+ EN +P TMVGVLSACA LE G WA ++ERN
Sbjct: 205 SGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGID 264
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV------------------------- 299
N +L ++DMY KCG + A ++F +M++KD V
Sbjct: 265 INLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVM 324
Query: 300 ------VWNAVVSGLSMNGYVKVAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEG 352
WNA++S NG K A +F +L+ +PN T L C G +D G
Sbjct: 325 PREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG 384
Query: 353 RQFFNSMSRV-----FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+ + F +T ++D+ + G L++A E+ S+ + VW A+
Sbjct: 385 GWIHVYIKKQGIKLNFHIT------TSLIDMYSKCGHLEKALEVFYSVERR-DVFVWSAM 437
Query: 408 LAGCRLH 414
+AG +H
Sbjct: 438 IAGLAMH 444
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 13/293 (4%)
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCG-----NMEKARRVFDQMPEKDIVSWSSMIQ 205
K +H ++ G F S L+ C +++ A +VFDQ+P ++ +W+++I+
Sbjct: 47 KQLHAHMLRTGL---FFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIR 103
Query: 206 GYASNGFPKEALDMFYNMQRENLK-PEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
+AS+ P + L +F M E+ + P YT V+ A + +L G + + F
Sbjct: 104 AFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFG 163
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
S+ + +LI Y+ G + A VF ++ +KD V WN+++SG G + A +F ++
Sbjct: 164 SDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRM 223
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ +PN T VG+L C ++ GR + + R +I M+D+ + G
Sbjct: 224 KMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILS-NAMLDMYVKCGS 282
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEPWNS 435
L++A L M E + + W ++ G D A V + + + WN+
Sbjct: 283 LEDARRLFDKME-EKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNA 334
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 279/637 (43%), Positives = 407/637 (63%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG + A++ Y M + G LP ++TFPFVLK+CA+ F+ G + H ++K G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
D D +V TSL+++YV G L DA KVFD
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+ISGY GN +EA+ +F+ ++ ++PD ++V V++AC Q G +
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 284
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++++ G G N+ + +L+DLY+KCG +E A +F+++P KD++SW+++I GY
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME-RNEFLSNPV 268
KEAL +F M R P TM+ +L ACA LGA+++G W +++ R + ++N
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 269 -LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMYAKCG + A +VF + K WNA++ G +M+G +F +F ++ K
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 464
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GIQP+ TFVGLL C+H+G++D GR F +M++ + +TP +EHYGCM+DLLG SG E
Sbjct: 465 GIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKE 524
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E+I M MEP+ ++W +LL C++H +L E LI +EP N G+YVLLSNIY++
Sbjct: 525 AEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYAS 584
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WN+ AK R+++ DKG++K+ GCS +E+D VVHEF++GD HP + +IY L+E+
Sbjct: 585 AGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 644
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRVC +C
Sbjct: 645 LEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 704
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
HEA KLISKI REII RD RFH F +G CSC D+W
Sbjct: 705 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/637 (43%), Positives = 403/637 (63%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+RG+ + A++ Y M + G LP ++TFPF+LK+CA+ F+ G + H ++K G
Sbjct: 37 MLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLG 96
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
+ D +V TSL+++Y G L DA KVFD
Sbjct: 97 YEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFD 156
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+ISGY G+ +EA+ +F+ ++ ++PD ++V VL+AC Q +
Sbjct: 157 EIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVEL 216
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++++ G G N+ + +L+DLY+KCG +E A +F+ + KD+VSW+++I GY
Sbjct: 217 GRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTH 276
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN--EFLSNP 267
KEAL +F M R P T+V +L ACA LGA+++G W ++++ + + P
Sbjct: 277 MNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAP 336
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMYAKCG + A +VF M K WNA++ G +M+G F +F ++ K
Sbjct: 337 SLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKN 396
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI+P+ TFVGLL C+H+G +D GR F SM++ + +TP +EHYGCM+DLLG SG E
Sbjct: 397 GIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKE 456
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E+IK+MPMEP+ ++W +LL CR H +LAE L+ +EP N G+YVLLSNIY+
Sbjct: 457 AKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYAT 516
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +W++ AK+R+++ KG++K+ GCS +E+D VHEF+VGD HP + +IY L+E+
Sbjct: 517 AGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEAL 576
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRVC +C
Sbjct: 577 LEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 636
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
HEA KL+SKI REII RD RFH F +G CSC DFW
Sbjct: 637 HEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/604 (44%), Positives = 384/604 (63%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N A+ ++ M+ G P + T V+ CA + G + H +++G
Sbjct: 192 IIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSG 251
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D V L+N+Y CG + A K+F+ +P ++V SW AII GY EA+ F
Sbjct: 252 IESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFN 311
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ RG+KP+S ++V VL AC L L + IHGY +G N V +LV++YAKCG
Sbjct: 312 RMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCG 371
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ A ++F++MP+K++V+W+++I GY+ +G P EAL +F MQ + +KP+ + +V VL
Sbjct: 372 NVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLP 431
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA ALE G + R+ F SN V+GT L+D+YAKCG + A K+F M ++D V
Sbjct: 432 ACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVS 491
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++ ++G+ + A +F ++++ G + + F +L C+HAGLVD+G Q+F M
Sbjct: 492 WTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMK 551
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L P +EHY C+VDLLGR+G LDEA+ +IK+M +EP+A VWGALL CR+H +L
Sbjct: 552 SDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELG 611
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E L L+P N+G YVLLSNIY+ + +W D AK+R MM +KG++K GCS V V
Sbjct: 612 EQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRD 671
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V FLVGD +HP SE+IY+ L+ L +++ AG+VP T+ L D+EEE K+ L+ HSEKL
Sbjct: 672 VQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKL 731
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A++FG+I T+P IRI KNLRVC DCH A K ISKI GREIIVRD NRFH G CSC
Sbjct: 732 AISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSC 791
Query: 601 KDFW 604
D+W
Sbjct: 792 GDYW 795
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 231/413 (55%), Gaps = 2/413 (0%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
I G+V N + A+ Y M+ G P F V+KAC + D Q G + H I+ G
Sbjct: 92 IIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGF 151
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ D V T+L ++Y CG L +A +VFD +P ++VVSW AII+GY G EA+ +F
Sbjct: 152 ESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSE 211
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ G+KP+S ++V V+ C L L K IH Y +G +V V LV++YAKCGN
Sbjct: 212 MQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGN 271
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ A ++F++MP +D+ SW+++I GY+ N EAL F MQ +KP TMV VL A
Sbjct: 272 VNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPA 331
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
CA L ALE G + R+ F SN V+G L++MYAKCG + A K+F M K+ V W
Sbjct: 332 CAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAW 391
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA++SG S +G+ A +F +++ GI+P+ V +L C H +++G+Q R
Sbjct: 392 NAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIR 451
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ ++ G +VD+ + G ++ A +L + MP E + + W ++ +H
Sbjct: 452 SGFESNVVVGTG-LVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILAYGIH 502
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 178/321 (55%), Gaps = 4/321 (1%)
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
N V W I GY+ G +A+ ++ ++ G+ PD + V+ AC DL + +H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
+ G +V V T+L +Y KCG++E AR+VFD+MP++D+VSW+++I GY+ NG P
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
EAL +F MQ +KP T+V V+ CA L ALE G + R+ S+ ++ L+
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+MYAKCG + A K+F M +D WNA++ G S+N A F +++ GI+PN
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSI 323
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
T V +L C H +++G+Q R F ++ + +V++ + G ++ A++L +
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGN--ALVNMYAKCGNVNSAYKLFE 381
Query: 394 SMPMEPNAIVWGALLAGCRLH 414
MP + N + W A+++G H
Sbjct: 382 RMP-KKNVVAWNAIISGYSQH 401
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 277/637 (43%), Positives = 404/637 (63%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG + AI+ Y M + G LP ++TFPF+LK+CA+ + G + H ++K G
Sbjct: 74 MFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLG 133
Query: 61 LDCDEFVKTSLLNLYVHCG-------------------------------YLADALKVFD 89
+ D +V TSL+++YV G Y+ A K+FD
Sbjct: 134 YELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFD 193
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW AIISGY + GN +EA+++F+ ++ +KPD ++V V++AC Q G +
Sbjct: 194 EIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQL 253
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++++ G G N+ + +L+DLY+KCG +E A +F + KD++SW++MI GY
Sbjct: 254 GRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTH 313
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME-RNEFLSNPV 268
KEAL +F M R P TM+ +L ACA LGA++ G W +++ R + ++N
Sbjct: 314 LNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNAS 373
Query: 269 -LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMYAKCG + A +VF M + NA++ G +M+G AF +F ++ K
Sbjct: 374 SLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKN 433
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI+P+ TFVGLL C+H+G++D GR+ F SM++ + +TP +EHYGCM+DLLG G E
Sbjct: 434 GIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKE 493
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E+I +M MEP+ ++W +LL C++H +L E +LI +EP N G+YVLLSNIY+
Sbjct: 494 AEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYAT 553
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WN+ A IR+++ DKG++K+ GCS +E+D VVHEF++GD HP + +IY L+E+
Sbjct: 554 AGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 613
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ AGFVP T VL ++EEE KQ L HSEKLA+AFGLI+T P + I KNLRVC +C
Sbjct: 614 LEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 673
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
HEA KLISKI REII RD RFH F +G CSC D+W
Sbjct: 674 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 200/397 (50%), Gaps = 39/397 (9%)
Query: 53 HSLIVKAGLDCDEFVKTSLLN---LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINE 109
H+ ++K GL + + LL L + L A+ VF+ I + N++ W + G+
Sbjct: 22 HAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHALS 81
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+ AI ++ ++ GL P+S++ +L +C +L + IHG+V + G +++V
Sbjct: 82 SDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVH 141
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF----------------- 212
TSL+ +Y K G + A +VFD +D+VS++++I GYAS G+
Sbjct: 142 TSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVV 201
Query: 213 --------------PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
KEALD+F M + N+KP+ TMV V+SACA G+++LG S++
Sbjct: 202 SWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWI 261
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ + SN + LID+Y+KCG + AC +F+ + +KD + WN ++ G + K A
Sbjct: 262 DDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEAL 321
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMVD 377
+F ++ + G PN T + +L C G +D GR + R+ +T ++D
Sbjct: 322 LLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLID 381
Query: 378 LLGRSGQLDEAHELIKSMPMEP----NAIVWGALLAG 410
+ + G ++ AH++ SM NA+++G + G
Sbjct: 382 MYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHG 418
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/606 (44%), Positives = 383/606 (63%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR N F A+E M P+ ++ A + ++G H+ +++
Sbjct: 166 MIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNS 225
Query: 61 LDCDEFVKTS--LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+ V T+ LL++Y CG+L A ++F+ + K VVSWTA+I+G I LEE +
Sbjct: 226 NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKL 285
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F R+ + P+ +++ ++ C G L K +H Y+ G ++ +AT+LVD+Y K
Sbjct: 286 FIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGK 345
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
C ++ AR +FD +D++ W++M+ YA +A ++F M+ ++P T+V +
Sbjct: 346 CSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSL 405
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
LS CA GAL+LG W S++++ + +L T L+DMYAKCG + A ++F E +D
Sbjct: 406 LSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDI 465
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+WNA+++G +M+GY + A +F ++E+ G++PN TF+GLL C+HAGLV EG++ F
Sbjct: 466 CMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEK 525
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M F L P IEHYGCMVDLLGR+G LDEAHE+IKSMP++PN IVWGAL+A CRLHK
Sbjct: 526 MVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQ 585
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E QL+ +EP N G VL+SNIY+A+++W+DAA +R M G++K G S +EV+
Sbjct: 586 LGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVN 645
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
G VHEFL+GD SHP +I L E+ KL AG+VP T VL +I+EEEK+ L HSE
Sbjct: 646 GTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSE 705
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA+AFGLI+TAP IRI KNLRVC DCH A KL+SKI GR IIVRD NRFH F EG C
Sbjct: 706 KLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYC 765
Query: 599 SCKDFW 604
SC D+W
Sbjct: 766 SCGDYW 771
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 201/387 (51%), Gaps = 4/387 (1%)
Query: 30 NFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFD 89
NF P VLKAC + QLG H ++K GLD D FV +L+ +Y C + A VFD
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+ +++VVSW+ +I + A+ + R + ++P ++V ++ ++
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 150 AKWIHGYV--NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
K +H YV N + V T+L+D+YAKCG++ AR++F+ + +K +VSW++MI G
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+ +E +F MQ EN+ P TM+ ++ C GAL+LG +++ RN F +
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T L+DMY KC + A +F +++D ++W A++S + + AF +F Q+
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 393
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++P T V LL C AG +D G+ + + + I + +VD+ + G ++
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTA-LVDMYAKCGDINA 452
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLH 414
A L + + +W A++ G +H
Sbjct: 453 AGRLFIE-AISRDICMWNAIITGFAMH 478
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 154/301 (51%), Gaps = 8/301 (2%)
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+F VL AC Q+ K IHG+V + G R+VFV +L+ +Y +C +E AR VFD
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M E+D+VSWS+MI+ + N AL++ M ++P MV +++ A + +
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 251 GVWASSFMER---NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
G +++ R NE + P T L+DMYAKCG + A ++F + K V W A+++G
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTT-TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAG 272
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLT 366
+ ++ +F ++++ I PN T + L+ C G + G+Q + R FS++
Sbjct: 273 CIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVS 332
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
+ +VD+ G+ + A L S + ++W A+L+ D A ++ +Q
Sbjct: 333 LALA--TALVDMYGKCSDIRNARALFDS-TQNRDVMIWTAMLSAYAQANCIDQAFNLFDQ 389
Query: 427 L 427
+
Sbjct: 390 M 390
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/631 (43%), Positives = 399/631 (63%), Gaps = 33/631 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG + A+ Y M + G P ++TFPF+ K+CA+ Q G + H+ I+K G
Sbjct: 49 MIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYG 108
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
L D V TSL+++Y G + DA KVFD
Sbjct: 109 LTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFD 168
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+ISGY G +EA+ +F ++ +KPD ++ VL+ CT G++
Sbjct: 169 EIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVEL 228
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ IH +++ G G N+ + +L+DLY+KCG ME+A +F+ + KD++SW+++I GYA
Sbjct: 229 GRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAY 288
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN--EFLSNP 267
KEAL +F M + P TM+ +L ACA LGA+++G W ++++ ++N
Sbjct: 289 INHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNT 348
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMYAKCG + A +VF + +K NA++ G +M+G AF + +++K
Sbjct: 349 SLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKD 408
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI+P+ TFVGLL C+HAGL D GR+ F SM+ + + P +EHYGCM+DLLGRSG E
Sbjct: 409 GIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKE 468
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A ELI SM MEP+ ++WG+LL C++HK +L E + +L+ +EP N G+YVLLSNIY+
Sbjct: 469 AEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYAT 528
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
S +W+D A++R+++ DKG++K+ GCS +E+D +VHEFL+GD HP +++IY L+E+ +
Sbjct: 529 SARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSL 588
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L GFV T VL ++EEE K+ L+ HSEKLA+AFGLI+T P +RI KNLRVC +C
Sbjct: 589 LAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNC 648
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
HEA KLISKI REII RD +RFH F +G C
Sbjct: 649 HEATKLISKIYKREIIARDRSRFHHFKDGMC 679
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 204/406 (50%), Gaps = 36/406 (8%)
Query: 57 VKAGLDCDEFVKTSLLNLYVHCGY---LADALKVFDDIPDKNVVSWTAIISGYINEGNLE 113
+K GL + + LL+ + Y L A+ VF I + N +SW +I G+ +
Sbjct: 1 IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60
Query: 114 EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLV 173
A+N++ ++ GL P+S++ + +C + K IH + + G ++ V TSL+
Sbjct: 61 SALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLI 120
Query: 174 DLYAKCG-------------------------------NMEKARRVFDQMPEKDIVSWSS 202
+YA+ G NM+KA+++FD++P KD+VSW++
Sbjct: 121 SMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNA 180
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
MI GYA G KEAL++F M + ++KP+ TM VLS C G +ELG S+++ +
Sbjct: 181 MISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHG 240
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
F SN L LID+Y+KCG M +A +F ++ KD + WN ++ G + + K A VF
Sbjct: 241 FGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQ 300
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS-LTPMIEHYGCMVDLLGR 381
++ K G PN T + +L C H G +D GR + + + ++D+ +
Sbjct: 301 EMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAK 360
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
G ++ A+++ ++ + + A++ G +H + D A +L+++
Sbjct: 361 CGNIEAANQVFDTI-LNKSLSSCNAMIFGFAMHGRADAAFDLLSRM 405
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/641 (42%), Positives = 406/641 (63%), Gaps = 37/641 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+RG S+ A+E Y M + G LP +++FPF+LK+CA+ F+ G + H+ ++K G
Sbjct: 35 MLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLG 94
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
D +V TSL+++Y G L DA KVFD
Sbjct: 95 CGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFD 154
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+I +++VVSW A+I+GY+ G EEA+ +F+ ++ ++PD ++V V++AC Q G +
Sbjct: 155 EITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIEL 214
Query: 150 AKWIHGYVNEA----GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
+ +H +V++ G ++ + +L+DLY+KCG++E A +F+ + KD+VSW+++I
Sbjct: 215 GRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIG 274
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN-EFL 264
GY KEAL +F M R P T++ VL ACA LGA+++G W ++++ + +
Sbjct: 275 GYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGV 334
Query: 265 SNPV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+N L T+LIDMYAKCG + A +VF M + WNA++ G +M+G AF +F +
Sbjct: 335 TNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSR 394
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
+ ++P+ TFVGLL C+H+GL+D GRQ F SM++ ++LTP +EHYGCM+DLLG SG
Sbjct: 395 MRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSG 454
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
EA E+I +MPMEP+ ++W +LL C+ H +LAE +LI +EP NSG+YVLLSN
Sbjct: 455 LFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSN 514
Query: 444 IYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDE 503
IY+ + +W D A++R ++ KG++K+ GCS +EVD VVHEF++GD HP +IY L+E
Sbjct: 515 IYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEE 574
Query: 504 LATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRV 563
+ +L+ AGF P T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRV
Sbjct: 575 MDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 634
Query: 564 CGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
C +CHEA KLISKI REI+ RD RFH F +G CSC D+W
Sbjct: 635 CRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/638 (42%), Positives = 398/638 (62%), Gaps = 34/638 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+RG S+ +E Y M + G +P +TFPF+LK+CA+ F+ G + H+ ++K G
Sbjct: 54 MLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLG 113
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDD------------------------------ 90
+ D + TSL+++Y G L DA KVFD
Sbjct: 114 CELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFD 173
Query: 91 -IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
I +++VVSW A+I+GY+ EEA+ +F+ ++ ++PD ++V VL+AC Q G +
Sbjct: 174 XITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIEL 233
Query: 150 AKWIHGYVNEA-GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+ IH V++ G G ++ + + + LY+KCG++E A +F+ + KD+VSW+++I GY
Sbjct: 234 GREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYT 293
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER--NEFLSN 266
KEAL +F M R P TM+ VL ACA LGA+++G W ++++ +
Sbjct: 294 HMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNG 353
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
L T+LIDMYAKCG + A +VF M K WNA++ G +M+G AF +F ++ K
Sbjct: 354 SALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRK 413
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLD 386
GI+P+ T VGLL C+H+GL+D GR F S+++ +++TP +EHYGCM+DLLG +G
Sbjct: 414 NGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFK 473
Query: 387 EAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYS 446
EA E+I MPMEP+ ++W +LL C++H +LAE +L+ +EP NSG+YVLLSNIY+
Sbjct: 474 EAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYA 533
Query: 447 ASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELAT 506
+ +W D A+IR ++ KG++K+ GCS +E+D VVHEF++GD HP S +IY L+E+
Sbjct: 534 TAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDV 593
Query: 507 KLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + + KNLRVC +
Sbjct: 594 LLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRN 653
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CHEA KLISKI REI+ RD RFH F +G CSC D+W
Sbjct: 654 CHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 199/405 (49%), Gaps = 37/405 (9%)
Query: 52 SHSLIVKAGLDCDEFVKTSLLNLYV---HCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
+H+ +VK GL + + LL L V H L A+ VF+ + N++ W ++ G +
Sbjct: 1 THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
+L + M+ R++ G P++++ +L +C + + IH V + G + +
Sbjct: 61 SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120
Query: 169 ATSLVDLYAKCGNMEKA-------------------------------RRVFDQMPEKDI 197
TSL+ +YA+ G +E A R+VFD + E+D+
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF 257
VSW++MI GY N +EAL++F M R N++P+ T+V VLSACA G++ELG +
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240
Query: 258 MERNE-FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
++ + F S+ + I +Y+KCG + A +F + KD V WN ++ G + K
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 300
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCM 375
A +F ++ + G PN T + +L C H G +D GR + R+ +T +
Sbjct: 301 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSL 360
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+D+ + G ++ AH++ SM M + W A++ G +H + + A
Sbjct: 361 IDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFGFAMHGRANAA 404
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/637 (43%), Positives = 400/637 (62%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG + A+ Y M + G LP +TFPF+LK+CA+ F+ G + H ++K G
Sbjct: 59 MFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLG 118
Query: 61 LDCDEFVKTSLLNLYVHCG-------------------------------YLADALKVFD 89
D D +V TSL+++YV G Y+A A K+FD
Sbjct: 119 YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFD 178
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+ISGY GN +EA+ +F+ ++ ++PD ++V V++AC Q +
Sbjct: 179 EIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIEL 238
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++++ G G N+ + +L+DLY KCG +E A +F+ + KD++SW+++I GY
Sbjct: 239 GRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTH 298
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM-ERNEFLSNPV 268
KEAL +F M R P TM+ +L ACA LGA+E+G W ++ +R + ++N
Sbjct: 299 MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANAS 358
Query: 269 LG-TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
T+LIDMYAKCG + A +VF + ++ WNA++ G +M+G AF +F ++ K
Sbjct: 359 SHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKN 418
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
I+P+ TFVGLL C+H+G++D GR F SM + +TP +EHYGCM+DLLG SG E
Sbjct: 419 EIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKE 478
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E+I +M MEP+ ++W +LL C++H +L E LI +EP N G+YVLLSNIY+
Sbjct: 479 AEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYAT 538
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WN+ AKIR+++ DKG++K+ GCS +E+D VVHEF++GD HP + +IY L+E+
Sbjct: 539 AGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 598
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRVC +C
Sbjct: 599 LEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 658
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
HEA KLISKI REII RD RFH F +G CSC D+W
Sbjct: 659 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/637 (42%), Positives = 398/637 (62%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG + A++ Y M + G LP ++TFPF+LK+CA+ + G++ H ++K G
Sbjct: 34 MFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLG 93
Query: 61 LDCDEFVKTSLLNLYVHC-------------------------------GYLADALKVFD 89
+ D +V TSL+++YV GY+ A +FD
Sbjct: 94 YELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFD 153
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+ISGY+ GN +EA+ +F+ ++ ++PD ++V V++A + G +
Sbjct: 154 EIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIEL 213
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++ + G G N+ + +L+D Y+KCG ME A +F + KD++SW+ +I GY
Sbjct: 214 GRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTH 273
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME-RNEFLSNPV 268
KEAL +F M R P TM+ +L ACA LGA+++G W +++ R + ++N
Sbjct: 274 LNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNAS 333
Query: 269 -LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMY+KCG + A +VF M K WNA++ G +M+G AF +F ++ K
Sbjct: 334 SLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKN 393
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
I+P+ TFVGLL C+HAG++D GR F SM+ + +TP +EHYGCM+DLLG SG E
Sbjct: 394 EIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKE 453
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E+I +M MEP+ ++W +LL C++H +L E L +EP N G+YVLLSNIY+
Sbjct: 454 AEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYAT 513
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WN+ A+IR ++ DKG++K+ GCS +E+D VVHEF++GD HP + +IY L+E+
Sbjct: 514 AGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 573
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P+ + I KNLRVC +C
Sbjct: 574 LQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNC 633
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
HEA KLISKI REII RD RFH F +G CSC D+W
Sbjct: 634 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 194/386 (50%), Gaps = 33/386 (8%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
L H L A+ VF+ I + N++ W + G+ + A+ ++ ++ GL P+S++
Sbjct: 6 LSPHFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYT 65
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+L +C +L IHG+V + G +++V TSL+ +Y + +E A +VFD+
Sbjct: 66 FPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSS 125
Query: 194 EKDIVSWSSMIQGYASNGFP-------------------------------KEALDMFYN 222
+D+VS+++++ GYAS G+ KEAL++F
Sbjct: 126 HRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKE 185
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M + N++P+ TMV V+SA A G++ELG S++ + F SN + LID Y+KCG
Sbjct: 186 MMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGE 245
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
M AC +F + KD + WN ++ G + K A +F ++ + G PN T + +L
Sbjct: 246 METACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHA 305
Query: 343 CTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C H G +D GR + R+ +T ++D+ + G ++ AH++ SM + +
Sbjct: 306 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSL 364
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQL 427
W A++ G +H + + A + +++
Sbjct: 365 PAWNAMIFGFAMHGRANAAFDIFSRM 390
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 277/635 (43%), Positives = 398/635 (62%), Gaps = 31/635 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG + A+ F+ M G P ++TFPF+LK+CA+ G + H+ ++K G
Sbjct: 100 MIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLG 159
Query: 61 LDCDEFVKTSLLNLYVHCG-------------------------------YLADALKVFD 89
D F+ TSL+N+Y G Y+ A ++FD
Sbjct: 160 FVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFD 219
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
++P K+VVSW A+I+GY G +EA+ +F + + P+ +IV VL+AC Q L
Sbjct: 220 EMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDL 279
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ ++ + G N+ + +L+D+Y+KCG+++ AR +FD M E+D++SW+ MI GY
Sbjct: 280 GNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTH 339
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
KEAL +F M ++P T + +L +CA LGA++LG W +++ +N + L
Sbjct: 340 MCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSL 399
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
T+LID+YAKCG + A +VF MK K WNA++ GL+M+G AF +F ++ GI
Sbjct: 400 STSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGI 459
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+PN TFVG+L C HAGLVD G+QFF+SM + + ++P +HYGCM+DLLGR+G +EA
Sbjct: 460 EPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAE 519
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
L+++M ++P+ +WG+LL CR H + +L E V +L LEP N G YVLLSNIY+ +
Sbjct: 520 SLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAG 579
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
KW+D A+IR+ + D+G++K+ GC+ +EVD VVHEFLVGD HP SE IY L+E+ +LK
Sbjct: 580 KWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLK 639
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
GFV T VL+D++EE K+ L+ HSEKLA+AFGLI+T P IRI KNLRVC +CH
Sbjct: 640 VFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHS 699
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A KLISKI REII RD NRFH F +GSCSC D+W
Sbjct: 700 ATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 216/415 (52%), Gaps = 37/415 (8%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ I+K GL F + L+ G ++ A+ +F+ I + N+ W ++I G
Sbjct: 49 HAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSL 108
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+ A+ F R+++ G++P+S++ +L +C +L K IH +V + G +VF+ T
Sbjct: 109 SPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHT 168
Query: 171 SLVDLYAKCGN-------------------------------MEKARRVFDQMPEKDIVS 199
SL+++YA+ G M++AR++FD+MP KD+VS
Sbjct: 169 SLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVS 228
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W++MI GYA G KEAL +F +M++ N+ P T+V VLSACA AL+LG S++E
Sbjct: 229 WNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIE 288
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
SN L LIDMY+KCG + A ++F +M ++D + WN ++ G + K A
Sbjct: 289 DRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALA 348
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F ++ G++P TF+ +L C H G +D G+ +++ F+ ++DL
Sbjct: 349 LFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSV-STSLSTSLIDLY 407
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEP 432
+ G + A ++ M ++ A W A++ G +H + D A + +++ + +EP
Sbjct: 408 AKCGNIVAARQVFDGMKIKSLA-SWNAMICGLAMHGQADKAFELFSKMSSDGIEP 461
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 44/312 (14%)
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA--KCGNMEKARRVFDQM 192
+++L+ C + T K IH ++ + G +F + L++ A + G++ A +F+ +
Sbjct: 33 LKLLSKCQSI---RTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSI 89
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
E ++ W+SMI+G + + P AL F M ++P YT +L +CA L + G
Sbjct: 90 EEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGK 149
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMA---------------------------- 284
+ + + F+S+ + T+LI+MYA+ G M
Sbjct: 150 QIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWG 209
Query: 285 ---QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
+A ++F EM KD V WNA+++G + G K A +F + K + PN +T V +L
Sbjct: 210 YMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLS 269
Query: 342 GCTHAGLVDEGRQFFNSMSRVFS---LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
C + +D G NSM L ++ ++D+ + G L A EL M +E
Sbjct: 270 ACAQSNALDLG----NSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM-LE 324
Query: 399 PNAIVWGALLAG 410
+ I W ++ G
Sbjct: 325 RDVISWNVMIGG 336
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 278 AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
++ G ++ A +F +++ + +WN+++ GLSM+ +A F ++ G++PN TF
Sbjct: 74 SRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFP 133
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
LL C EG+Q + ++ ++ + H ++++ +SG+++ A +L+
Sbjct: 134 FLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTS-LINMYAQSGEMNNA-QLVFDQSN 191
Query: 398 EPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE--PWNS 435
+AI + AL+AG L D A + +++ + WN+
Sbjct: 192 FRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNA 231
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 274/637 (43%), Positives = 400/637 (62%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG + A+ Y M + G LP +TFPF+LK+CA+ F+ G + H ++K G
Sbjct: 74 MFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLG 133
Query: 61 LDCDEFVKTSLLNLYVHCG-------------------------------YLADALKVFD 89
D D +V TSL+++YV G Y+A A K+FD
Sbjct: 134 YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFD 193
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+ISGY GN +EA+ +F+ ++ ++PD ++V V++AC Q +
Sbjct: 194 EIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIEL 253
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++++ G G N+ + +L+DLY KCG +E A +F+ + KD++SW+++I GY
Sbjct: 254 GRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTH 313
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM-ERNEFLSNPV 268
KEAL +F M R P TM+ +L ACA LGA+E+G W ++ +R + ++N
Sbjct: 314 MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANAS 373
Query: 269 LG-TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
T+LIDMYAKCG + A +VF + ++ WNA++ G +M+G AF +F ++ K
Sbjct: 374 SHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKN 433
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
I+P+ TFVGLL C+H+G++D GR F SM + +TP +EHYGCM+DLLG SG E
Sbjct: 434 EIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKE 493
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E+I +M MEP+ ++W +LL C+++ +L E LI +EP N G+YVLLSNIY+
Sbjct: 494 AEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYAT 553
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WN+ AKIR+++ DKG++K+ GCS +E+D VVHEF++GD HP + +IY L+E+
Sbjct: 554 AGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 613
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRVC +C
Sbjct: 614 LEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 673
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
HEA KLISKI REII RD RFH F +G CSC D+W
Sbjct: 674 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/432 (62%), Positives = 323/432 (74%), Gaps = 12/432 (2%)
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
R +F Q+ + +I W++MI+G SN +A++ + M+ E P +T VL ACA
Sbjct: 65 TRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACAR 124
Query: 245 LGALELGV---------WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
L L+LGV W + + N +GT+L+DMYAKCG M +A VF M +
Sbjct: 125 LLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPE 184
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLE---KCGIQPNGNTFVGLLCGCTHAGLVDEG 352
KD V W A++ G ++NG K A +F Q++ K GI+P+GNTF+GLLCGCTHAGLVDEG
Sbjct: 185 KDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEG 244
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
R++FNSM R FSLTP IEHYGCMVDLLGR+G LDEAH+LI++MPME NAIVWGALL CR
Sbjct: 245 RRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACR 304
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
+H+ T LAE L QLI LEPWNSGNYVLLSNIYSA+ KW++AAK+R M +K IQK GC
Sbjct: 305 IHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGC 364
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF 532
SW+EVDG+VHEFLVGD HPLSEKIY+KLDEL K+K AG+VPTTD VLFDIEEEEK++F
Sbjct: 365 SWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHF 424
Query: 533 LACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
L CHSEKLA+AFGLI+ P VIR+ KNLRVCGDCH AIKLIS ITGREI VRDNNRFHC
Sbjct: 425 LGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHC 484
Query: 593 FIEGSCSCKDFW 604
F EGSCSC D+W
Sbjct: 485 FREGSCSCNDYW 496
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 155/282 (54%), Gaps = 18/282 (6%)
Query: 71 LLNLYVHCGY-LADA---LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 126
LLN+ + C + +D +F I N+ W +I G ++ ++AI + + G
Sbjct: 48 LLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEG 107
Query: 127 LKPDSFSIVRVLTACTQLGDLS---------TAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
P++F+ VL AC +L DL +WIH + E G RNVFV TSLVD+YA
Sbjct: 108 FLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYA 167
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN---LKPEYYT 234
KCGNMEKAR VFD MPEKDIVSW +MIQGYA NG PKEA+D+F MQREN +KP+ T
Sbjct: 168 KCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNT 227
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT-TLIDMYAKCGRMAQACKVFREM 293
+G+L C G ++ G + M R L+ + ++D+ + G + +A ++ R M
Sbjct: 228 FIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNM 287
Query: 294 K-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+ + +VW A++ ++ ++A QL + +GN
Sbjct: 288 PMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGN 329
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 132/221 (59%), Gaps = 20/221 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA- 59
MIRG VSNDCF AIEFY MR+EGFLP NFTFPFVLKACAR D QLGV+ H+L+VK
Sbjct: 83 MIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEW 142
Query: 60 --------GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGN 111
G+ + FV TSL+++Y CG + A VFD +P+K++VSW A+I GY G
Sbjct: 143 IHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGL 202
Query: 112 LEEAINMFRRLLHR---GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
+EAI++F ++ G+KPD + + +L CT G + + Y N + ++
Sbjct: 203 PKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGR---RYFNSMYRFFSLTP 259
Query: 169 ATS----LVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ +VDL + G +++A ++ MP E + + W +++
Sbjct: 260 SIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 300
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/606 (43%), Positives = 395/606 (65%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+ + A+ Y M G N+T+PFVL ACAR +LG R H ++K G
Sbjct: 82 MIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNG 141
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV +L+ Y +CG A VFD+ ++VV+W +I+ ++N+G E+A ++
Sbjct: 142 FGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLD 201
Query: 121 RLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ L+PD ++V ++ AC QLG+L K++H Y E G N+ V +++D+Y KC
Sbjct: 202 EMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKC 261
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++E A+ VF+++ EKD++SW+SM+ G A +G+ +EAL +F MQ ++ + T+VGVL
Sbjct: 262 DDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVL 321
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACA GAL+ G + +++ E + VL T L+DMYAKCG + A +VFR M+ ++
Sbjct: 322 SACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVF 381
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ GL+M+G+ + A +F Q+E + P+ TF+ LLC C+HAGLVDEG F +M
Sbjct: 382 TWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAM 441
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
F + P +EHYGC+VDLL R+ ++D+A I++MP++ N+++W LL CR DL
Sbjct: 442 KNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDL 501
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE + ++I LEP + G YV+LSN+Y+ +W+ A K+R M +KGI+K GCSW+E++G
Sbjct: 502 AEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNG 561
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKA-AGFVPTTDHVLFDIEEEEKQYFLACHSE 538
++H+F+ GD SH +E+IY+ ++E+ ++ G VP T +VLFDIEEEEK++ L HSE
Sbjct: 562 MIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSE 621
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA+A GLI+T IRI KNLRVC DCH +K+ SK+ REI+ RD +RFH F EGSC
Sbjct: 622 KLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSC 681
Query: 599 SCKDFW 604
SC DFW
Sbjct: 682 SCMDFW 687
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 203/380 (53%), Gaps = 5/380 (1%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
++H+L+++ L + + L++ H G L A K+F + + + +I GY
Sbjct: 29 QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYAR 88
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
N EA++++ ++ RG+ D+++ VL AC +LG + + H V + G G ++FV
Sbjct: 89 SQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFV 148
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-EN 227
+L+ Y CG+ A VFD+ +D+V+W+ MI + + G ++A D+ M + +N
Sbjct: 149 INALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN 208
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
L+P+ TMV ++ ACA LG LE G + S+ + N + ++DMY KC + A
Sbjct: 209 LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQ 268
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+VF +++KD + W +++SGL+ +GY + A +F +++ I+ + T VG+L C G
Sbjct: 269 EVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTG 328
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+D+G+ + + + F + + +VD+ + G +D A ++ + M + N W AL
Sbjct: 329 ALDQGK-YIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNAL 386
Query: 408 LAGCRLHKKTDLAEHVLNQL 427
+ G +H + A + +Q+
Sbjct: 387 IGGLAMHGHGEDAISLFDQM 406
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 13/292 (4%)
Query: 127 LKPDS-----FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA--KC 179
+KP S S+ + T CT + S K H + N ++ L+ A
Sbjct: 2 IKPSSKCTKLISVDFLKTHCTSI---SKTKQAHALLLRTHLLHNPLFSSKLISFLALSHS 58
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ AR++F QM D ++MI+GYA + P EA+ ++Y M + + YT VL
Sbjct: 59 GDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVL 118
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+ACA LGA++LG + +N F S+ + LI Y CG AC VF E +D V
Sbjct: 119 AACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVV 178
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WN +++ G + AF + ++ K ++P+ T V L+ C G ++ G+ F +S
Sbjct: 179 TWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGK-FLHS 237
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
S+ L + ++D+ + ++ A E+ + E + + W ++L+G
Sbjct: 238 YSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRI-REKDVLSWTSMLSG 288
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/615 (43%), Positives = 389/615 (63%), Gaps = 22/615 (3%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
++A+ Y MR +F P VLKAC++ ++G H VK GL D FV +L
Sbjct: 91 RYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNAL 150
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSW----------------------TAIISGYINE 109
+ +Y CG L A +FD + +++VVSW TA+I+GYI
Sbjct: 151 MQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRC 210
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+LEE +F R++ + P+ +++ ++ +C +G + K +H Y+ G G ++ +A
Sbjct: 211 NDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALA 270
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
T+LVD+Y KCG + AR +FD M KD+++W++MI YA A +F M+ ++
Sbjct: 271 TALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVR 330
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P TMV +LS CA GAL++G W +++++ + +L T LIDMYAKCG ++ A ++
Sbjct: 331 PNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRL 390
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F E D+D WN +++G M+GY + A +F ++E G++PN TF+G L C+HAGLV
Sbjct: 391 FSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLV 450
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
EG+ F M F L P +EHYGCMVDLLGR+G LDEA+++I+SMP+ PN +WGA+LA
Sbjct: 451 VEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLA 510
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKI 469
C++HK +++ E +L+ALEP N G VL+SNIY+A+++WND A +R + D GI+K
Sbjct: 511 ACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKE 570
Query: 470 RGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEK 529
G S +EV+G+VH+F +GD +HPL EKI L E++ KLK AG++P T VL +I+EEEK
Sbjct: 571 PGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEK 630
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+ L HSEKLA+AFGLI+TAP IR+ KNLR+C DCH KL+SKI R IIVRD NR
Sbjct: 631 ETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNR 690
Query: 590 FHCFIEGSCSCKDFW 604
FH F EGSCSC +W
Sbjct: 691 FHHFREGSCSCGGYW 705
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 168/312 (53%), Gaps = 8/312 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G++ + + + M E P + T ++ +C QLG R H+ I++ G
Sbjct: 203 MIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNG 262
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ T+L+++Y CG + A +FD + +K+V++WTA+IS Y ++ A +F
Sbjct: 263 FGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFV 322
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++P+ ++V +L+ C G L KW H Y+++ G +V + T+L+D+YAKCG
Sbjct: 323 QMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCG 382
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+R+F + ++DI +W+ M+ GY +G+ ++AL +F M+ +KP T +G L
Sbjct: 383 DISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALH 442
Query: 241 ACASLGALELGVWASSFMER--NEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK 296
AC+ G L V E+ ++F P + ++D+ + G + +A K+ M
Sbjct: 443 ACSHAG---LVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVT 499
Query: 297 DQV-VWNAVVSG 307
+ +W A+++
Sbjct: 500 PNIAIWGAMLAA 511
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 24/328 (7%)
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
E + A+N + + ++ DSF I VL AC+Q+ K IHG+ + G +VFV
Sbjct: 87 ESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFV 146
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS--NGFPKEAL--------- 217
+L+ +Y++CG++ AR +FD+M E+D+VSWS+MI+ Y + GF + ++
Sbjct: 147 VNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAG 206
Query: 218 -----------DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
+F M EN+ P TM+ ++ +C +GA++LG +++ RN F +
Sbjct: 207 YIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMS 266
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
L T L+DMY KCG + A +F MK+KD + W A++S + + AF +F Q+
Sbjct: 267 LALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRD 326
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLD 386
G++PN T V LL C G +D G+ F + + +I ++D+ + G +
Sbjct: 327 NGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTA-LIDMYAKCGDIS 385
Query: 387 EAHELIKSMPMEPNAIVWGALLAGCRLH 414
A L S ++ + W ++AG +H
Sbjct: 386 GAQRLF-SEAIDRDICTWNVMMAGYGMH 412
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/638 (42%), Positives = 402/638 (63%), Gaps = 34/638 (5%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR + S+ D FQ + F + + LP FTFPFV+KA + ++G H + +K
Sbjct: 96 LIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKL 155
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D ++ SL+ Y CG L+ A ++F I K+VVSW ++IS + E+A+ +F
Sbjct: 156 SFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELF 215
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ + P+S ++V VL+AC + DL +W+ Y+ G ++ + +++D+Y KC
Sbjct: 216 LKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKC 275
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYA------------------------------- 208
G+++ A+++FD+MPE+D+ SW+ M+ GYA
Sbjct: 276 GSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYE 335
Query: 209 SNGFPKEALDMFYNMQRENL-KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
NG PKEAL +F +Q + KP+ T+V LSACA LGA++LG W +++R + N
Sbjct: 336 QNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNC 395
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L ++L+DMYAKCG + +A +VF ++++D VW+A+++GL M+G K A +F ++++
Sbjct: 396 HLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEA 455
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
++PN TF +LC C+HAGLVDEGR FF+ M V+ + P ++HY CMVD+LGR+G L+E
Sbjct: 456 KVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEE 515
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A ELI M P+A VWGALL C LH +L E +QL+ LEP N G VLLSNIY+
Sbjct: 516 AMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAK 575
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +W +++R +M D ++K GCS +E +G VHEFLVGDN+HPLS IYSKL+E+ATK
Sbjct: 576 TGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATK 635
Query: 508 LKAAGFVPTTDHVLFDIEEEE-KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
LK+ G+ P H+L IEE++ K+ L+ HSEKLA+AFGL+T AP IR+ KNLR+CGD
Sbjct: 636 LKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGD 695
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CH KL+S++ R+I++RD RFH F +G CSC D+W
Sbjct: 696 CHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 188/399 (47%), Gaps = 37/399 (9%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ +++ GL D F + L + L A +FD IP N+ +W +I Y +
Sbjct: 45 HARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSS 104
Query: 111 NLEEAINMFRRLLHRGLK-PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+ ++ +F LL + P+ F+ V+ A ++L +HG + G ++++
Sbjct: 105 DPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYIL 164
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
SLV Y CG++ A R+F + KD+VSW+SMI +A P++AL++F M+REN+
Sbjct: 165 NSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVM 224
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P TMVGVLSACA LE G W S++ER + L ++DMY KCG + A K+
Sbjct: 225 PNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKL 284
Query: 290 FREMKDKDQ-------------------------------VVWNAVVSGLSMNGYVKVAF 318
F EM ++D WN ++S NG K A
Sbjct: 285 FDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEAL 344
Query: 319 GVFGQLEKCGI-QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
+F +L+ I +P+ T V L C G +D G + R + +VD
Sbjct: 345 AIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKRE-GIVLNCHLISSLVD 403
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+ + G L++A E+ S+ E + VW A++AG +H +
Sbjct: 404 MYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHGR 441
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 144/305 (47%), Gaps = 9/305 (2%)
Query: 136 RVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA--KCGNMEKARRVFDQMP 193
++L+ + K +H + G + F A+ L A ++ AR +FDQ+P
Sbjct: 27 QILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIP 86
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNM--QRENLKPEYYTMVGVLSACASLGALELG 251
+ ++ +W+++I+ YAS+ P ++ +F ++ + E+L P +T V+ A + L A +G
Sbjct: 87 QPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDL-PNKFTFPFVIKAASELKASRVG 145
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ F + + +L+ Y CG ++ A ++F+ + KD V WN+++S +
Sbjct: 146 TAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQG 205
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
+ A +F ++E+ + PN T VG+L C ++ GR + + R + +
Sbjct: 206 NCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERK-GIKVDLTL 264
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
M+D+ + G +D+A +L MP E + W +L G D A V N + E
Sbjct: 265 CNAMLDMYTKCGSVDDAQKLFDEMP-ERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKE 323
Query: 432 --PWN 434
WN
Sbjct: 324 IAAWN 328
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 271/605 (44%), Positives = 398/605 (65%), Gaps = 9/605 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR S+ A+ Y++M G P + T+PFV+KAC G+ H+ +VK+G
Sbjct: 166 LIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSG 225
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+CD ++ +SL++LY + L A ++F+ ++VVSW A+I GY+ + A +F
Sbjct: 226 FECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFD 285
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R++ R D S ++ +G + AK + + E RN+ S++ + KCG
Sbjct: 286 RMVCR----DVISWNTMINGYAIVGKIDEAKRLFDEMPE----RNLVSWNSMLAGFVKCG 337
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+E A +F +MP +D+VSW+SM+ YA G P EAL +F M+ +KP T+V +LS
Sbjct: 338 NVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLS 397
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LGAL+ G+ +++ N N ++GT L+DMYAKCG+++ A +VF M+ KD +
Sbjct: 398 ACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLA 457
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++G++++G VK A +F ++++ G++PN TFV +L C+HAG+VDEG++ + MS
Sbjct: 458 WNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMS 517
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P +EHYGC++DLL R+G L+EA ELI +MPMEPN GALL GCR+H +L
Sbjct: 518 SSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELG 577
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V +LI L+P +SG Y+LLSNIY+A+ KW+DA K+R++M GI K+ G S +E+ G+
Sbjct: 578 EMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGM 637
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAA-GFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F+ GD SHP S KIY KL+E+ T+LK+A G+ T +VL D+EEE+K++ LA HSEK
Sbjct: 638 VHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEK 697
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GL+ K+ IRI KNLRVC DCH IKLISK+ GREIIVRD NRFH F +G CS
Sbjct: 698 LAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECS 757
Query: 600 CKDFW 604
C DFW
Sbjct: 758 CLDFW 762
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 166/361 (45%), Gaps = 36/361 (9%)
Query: 80 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
+LA A +F + + + ++I + EA+ ++ +L GLKPD + V+
Sbjct: 144 FLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIK 203
Query: 140 ACTQLGDLSTAKW----IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
AC + S+ W +H +V ++G + ++ +SL+ LYA ++ A+++F+ +
Sbjct: 204 ACNE----SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSAR 259
Query: 196 DIVSWSSMIQGYASN---GFPKEALDMFY--NMQRENLKPEYYTMVGVLSACASLGALEL 250
D+VSW++MI GY + G + D ++ N Y +VG + L
Sbjct: 260 DVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRL----- 314
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
F E E N V +++ + KCG + A +F EM +D V WN++++ +
Sbjct: 315 ------FDEMPE--RNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQ 366
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS----RVFSLT 366
G A +F Q+ G++P T V LL C H G +D+G ++ V S+
Sbjct: 367 CGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIV 426
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
+VD+ + G++ A ++ +M + + + W ++AG +H A+ + +
Sbjct: 427 GT-----ALVDMYAKCGKISLATQVFNAMESK-DVLAWNTIIAGMAIHGNVKEAQQLFKE 480
Query: 427 L 427
+
Sbjct: 481 M 481
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/635 (41%), Positives = 393/635 (61%), Gaps = 31/635 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI+G+ + Q+ + Y M P FTFPF+LK R Q G + VK G
Sbjct: 78 MIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHG 137
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + FV+ + ++++ C + A KVFD VV+W ++SGY +++ +F
Sbjct: 138 FDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFI 197
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ RG+ P+S ++V +L+AC++L DL K I+ Y+N RN+ + L+D++A CG
Sbjct: 198 EMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACG 257
Query: 181 NMEKA-------------------------------RRVFDQMPEKDIVSWSSMIQGYAS 209
M++A R+ FDQ+PE+D VSW++MI GY
Sbjct: 258 EMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLR 317
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
EAL +F MQ N+KP+ +TMV +L+ACA LGALELG W +++++N ++ +
Sbjct: 318 MNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFV 377
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
G LIDMY KCG + +A KVF+EM KD+ W A++ GL++NG+ + A +F + + I
Sbjct: 378 GNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASI 437
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
P+ T++G+LC CTHAG+V++G+ FF SM+ + P + HYGCMVDLLGR+G+L+EAH
Sbjct: 438 TPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAH 497
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
E+I +MP++PN+IVWG+LL CR+HK LAE Q++ LEP N YVLL NIY+A
Sbjct: 498 EVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACK 557
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
+W + ++R +M ++GI+K GCS +E++G V+EF+ GD SHP S++IY+KL+ + L
Sbjct: 558 RWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLI 617
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
AG+ P T V D+ EE+K+ L HSEKLA+A+ LI++ P IRI KNLR+C DCH
Sbjct: 618 KAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHH 677
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KL+S+ RE+IVRD RFH F GSCSC +FW
Sbjct: 678 MAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 190/409 (46%), Gaps = 35/409 (8%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
HS +K GL D + ++ G + A +VFD IP + W +I GY
Sbjct: 27 HSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRIN 86
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+ + ++M+ +L +KPD F+ +L T+ L K + + + G N+FV
Sbjct: 87 HPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQK 146
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+ + +++ C ++ AR+VFD ++V+W+ M+ GY K++ +F M++ + P
Sbjct: 147 AFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSP 206
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
T+V +LSAC+ L LE G ++ N +L LIDM+A CG M +A VF
Sbjct: 207 NSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVF 266
Query: 291 REMKDKDQVVWNAVVSGLS--------------------------MNGYVKV-----AFG 319
MK++D + W ++V+G + ++GY+++ A
Sbjct: 267 DNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALA 326
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F +++ ++P+ T V +L C H G ++ G ++ + S+ ++D+
Sbjct: 327 LFREMQMSNVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNSIKNDTFVGNALIDMY 385
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ G + +A ++ K M + W A++ G ++ + A + + +I
Sbjct: 386 FKCGNVGKAKKVFKEMH-HKDKFTWTAMIVGLAINGHGEEALAMFSNMI 433
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/637 (43%), Positives = 387/637 (60%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + + ++A+ Y +R F NF P VLKAC + QLG H ++K G
Sbjct: 95 VITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKG 154
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D FV +L+ +Y C + A VFD + +++VVSW+ +I + A+ + R
Sbjct: 155 LDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIR 214
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV--NEAGKGRNVFVATSLVDLYAK 178
+ ++P ++V ++ ++ K +H YV N + V T+L+D+YAK
Sbjct: 215 EMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAK 274
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQG-------------------------------Y 207
CG++ AR++F+ + +K +VSW++MI G Y
Sbjct: 275 CGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAY 334
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A +A ++F M+ ++P T+V +LS CA GAL+LG W S++++ +
Sbjct: 335 AQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDC 394
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+L T L+DMYAKCG + A ++F E +D +WNA+++G +M+GY + A +F ++E+
Sbjct: 395 ILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQ 454
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++PN TF+GLL C+HAGLV EG++ F M F L P IEHYGCMVDLLGR+G LDE
Sbjct: 455 GVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDE 514
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
AHE+IKSMP++PN IVWGAL+A CRLHK L E QL+ +EP N G VL+SNIY+A
Sbjct: 515 AHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAA 574
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+++W+DAA +R M G++K G S +EV+G VHEFL+GD SHP +I L E+ K
Sbjct: 575 ANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRK 634
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L AG+VP T VL +I+EEEK+ L HSEKLA+AFGLI+TAP IRI KNLRVC DC
Sbjct: 635 LNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDC 694
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A KL+SKI GR IIVRD NRFH F EG CSC D+W
Sbjct: 695 HAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 180/390 (46%), Gaps = 40/390 (10%)
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKV-FDDIPD--KNVVSWTAIISGYINEGNLEEAINM 118
D +T ++ ++ + AL++ +D P W +I+ Y A+N+
Sbjct: 52 DLSTLEQTKQIHAHIIKTHFHHALQIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNV 111
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ +L + D+F VL AC Q+ K IHG+V + G R+VFV +L+ +Y +
Sbjct: 112 YAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGE 171
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
C +E AR VFD+M E+D+VSWS+MI+ + N AL++ M ++P MV +
Sbjct: 172 CACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSM 231
Query: 239 LSACASLGALELGVWASSFMER---NEFLSNPVLGTTLIDMYAKCG-------------- 281
++ A + +G +++ R NE + P T L+DMYAKCG
Sbjct: 232 VNLFADTANMRMGKAMHAYVIRNSNNEHMGVPT-TTALLDMYAKCGHLGLARQLFNGLTQ 290
Query: 282 -----------------RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
R+ +A +F +++D ++W A++S + + AF +F Q+
Sbjct: 291 KTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM 350
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
G++P T V LL C AG +D G+ + + + I + +VD+ + G
Sbjct: 351 RTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTA-LVDMYAKCGD 409
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ A L + + +W A++ G +H
Sbjct: 410 INAAGRLFIE-AISRDICMWNAIITGFAMH 438
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/637 (43%), Positives = 398/637 (62%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ + ++ ++ M G P + TFPF+ K+C + G + H+ +K
Sbjct: 102 LIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLA 161
Query: 61 LDCDEFVKTSLLNLY-------------------------------VHCGYLADALKVFD 89
L + V TS++++Y V G L DA ++FD
Sbjct: 162 LHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFD 221
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+ISGY+ G EEAI F + + P+ ++V VL+AC
Sbjct: 222 EIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGEL 281
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
KWI +V + G G N+ + +L+D+Y KCG + AR +FD + EKD++SW++MI GY+
Sbjct: 282 GKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSY 341
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN-EFLSNPV 268
+EAL +F M R N+KP T +G+L ACA LGAL+LG W +++++N SN
Sbjct: 342 LSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNAS 401
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
L T+LIDMYAKCG + A +VFR M ++ WNA++SG +M+G+ + A +F ++ G
Sbjct: 402 LWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKG 461
Query: 329 I-QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+ +P+ TFVG+L CT AGLVD G Q+F SM + + ++P ++HYGCM+DLL R+ + +E
Sbjct: 462 LFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEE 521
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A L+K+M MEP+ +WG+LL+ C+ H + + E+V +L LEP N+G +VLLSNIY+
Sbjct: 522 AEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAG 581
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +W+D A+IR+ + DKG++K+ GC+ +E+DG VHEFLVGD HP IY L+E+
Sbjct: 582 AGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKL 641
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ GFVP T VL+D++EE K+ L+ HSEKLA++FGLI T P IRI KNLRVCG+C
Sbjct: 642 LEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNC 701
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A KLISKI REII RD NRFH F +G CSC D W
Sbjct: 702 HSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 214/429 (49%), Gaps = 40/429 (9%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL--YVHCGYLADALKVFDDIPD 93
+L+ C + F+ + HSLI+K GL+ FV++ L++ G L+ AL +F++
Sbjct: 34 LLEKCKNINTFK---QIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQ 90
Query: 94 K---NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
NV W ++I GY + ++++F R+L+ G++P+S + + +CT+
Sbjct: 91 HHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEG 150
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA------------------------- 185
K +H + + N V TS++ +YA G M+ A
Sbjct: 151 KQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQ 210
Query: 186 ------RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
RR+FD++P KD+VSW++MI GY +G +EA+ FY MQ N+ P TMV VL
Sbjct: 211 GCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVL 270
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SAC + ELG W S++ N F SN L LIDMY KCG A ++F +++KD +
Sbjct: 271 SACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVI 330
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN ++ G S + A +F + + ++PN TF+G+L C G +D G+ +
Sbjct: 331 SWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYI 390
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + + ++D+ + G ++ A + +SM N W A+L+G +H +
Sbjct: 391 DKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR-NLASWNAMLSGFAMHGHAER 449
Query: 420 AEHVLNQLI 428
A + ++++
Sbjct: 450 ALALFSEMV 458
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/604 (43%), Positives = 391/604 (64%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ S++ F AIE Y+ M+ G P FT P VLKAC+ ++G R H I + G
Sbjct: 140 IIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLG 199
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV+ L+ LY CG + A VF+ + D+N+VSWT++ISGY G EA+ +F
Sbjct: 200 FESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFG 259
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ R +KPD ++V VL A T + DL K IHG V + G + SL +YAKCG
Sbjct: 260 QMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCG 319
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ AR FDQM +++ W++MI GYA NG+ EA+ +F M +N++ + T+ +
Sbjct: 320 QVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAIL 379
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA +G+L+L W ++ + E+ ++ + T LIDM+AKCG + A +VF DKD VV
Sbjct: 380 ACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVV 439
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ G ++G + A +F +++ G+ PN TFVGLL C H+GLV+EG + F+SM
Sbjct: 440 WSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM- 498
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + +HY C+VDLLGRSG L+EA++ I +MP+EP VWGALL C++++ L
Sbjct: 499 KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLG 558
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E+ QL +L+P+N+G+YV LSN+Y++S W+ AK+R +M +KG+ K G S +E++G
Sbjct: 559 EYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGK 618
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+ F VGD SHP ++I+ +L+ L +LK AGF+P + VL D+ +EEK+ L HSE+L
Sbjct: 619 LQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERL 678
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+GLI+TAP +RI KNLR C +CH A KLISK+ REI+VRD NRFH F G CSC
Sbjct: 679 AIAYGLISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSC 738
Query: 601 KDFW 604
+D+W
Sbjct: 739 RDYW 742
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 198/364 (54%), Gaps = 2/364 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ +V +GL F+ T +N + G + A KVFD+ P+ +V W AII GY +
Sbjct: 91 HAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFF 150
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
+AI M+ R+ G+ PD F++ VL AC+ + L K +HG + G +VFV L
Sbjct: 151 GDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGL 210
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
V LYAKCG +E+AR VF+ + +++IVSW+SMI GY NG P EAL +F M++ N+KP++
Sbjct: 211 VALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDW 270
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+V VL A + LE G + + P L +L MYAKCG++ A F +
Sbjct: 271 IALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQ 330
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M+ + ++WNA++SG + NGY A G+F ++ I+ + T + C G +D
Sbjct: 331 MEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLA 390
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+ + +++ + + ++D+ + G +D A E+ ++ + +VW A++ G
Sbjct: 391 KWMGDYINKTEYRNDVFVN-TALIDMFAKCGSVDLAREVFDRT-LDKDVVVWSAMIVGYG 448
Query: 413 LHKK 416
LH +
Sbjct: 449 LHGR 452
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 146/280 (52%), Gaps = 8/280 (2%)
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IH + +G + F+ T V+ G + AR+VFD+ PE + W+++I+GY+S+ F
Sbjct: 90 IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNF 149
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+A++M+ MQ + P+ +T+ VL AC+ + LE+G + R F S+ +
Sbjct: 150 FGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNG 209
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+ +YAKCGR+ QA VF + D++ V W +++SG NG A +FGQ+ + ++P+
Sbjct: 210 LVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPD 269
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRV---FSLTPMIEHYGCMVDLLGRSGQLDEAH 389
V +L T +++G+ + ++ F +I + + + GQ+ A
Sbjct: 270 WIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLIS----LTAMYAKCGQVMVAR 325
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
M + PN ++W A+++G + T+ A + ++I+
Sbjct: 326 SFFDQMEI-PNVMMWNAMISGYAKNGYTNEAVGLFQEMIS 364
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/606 (43%), Positives = 383/606 (63%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR + + A++ M P+ + A D +LG H+ +++ G
Sbjct: 196 MIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNG 255
Query: 61 LDCDEFVK--TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
V T+L+++YV C LA A +VFD + +++SWTA+I+ YI+ NL E + +
Sbjct: 256 KCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRL 315
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++L G+ P+ +++ ++ C G L K +H + G ++ +AT+ +D+Y K
Sbjct: 316 FVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGK 375
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG++ AR VFD KD++ WS+MI YA N EA D+F +M ++P TMV +
Sbjct: 376 CGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSL 435
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L CA G+LE+G W S++++ + +L T+ +DMYA CG + A ++F E D+D
Sbjct: 436 LMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDI 495
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+WNA++SG +M+G+ + A +F ++E G+ PN TF+G L C+H+GL+ EG++ F+
Sbjct: 496 SMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHK 555
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M F TP +EHYGCMVDLLGR+G LDEAHELIKSMPM PN V+G+ LA C+LHK
Sbjct: 556 MVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIK 615
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E Q ++LEP SG VL+SNIY+++++W D A IR M D+GI K G S +EV+
Sbjct: 616 LGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVN 675
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
G++HEF++GD HP ++K+Y +DE+ KL+ AG+ P VL +I++E+K L HSE
Sbjct: 676 GLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSE 735
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA+A+GLI+TAP IRI KNLRVC DCH A KL+SKI GREIIVRD NRFH F EGSC
Sbjct: 736 KLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSC 795
Query: 599 SCKDFW 604
SC D+W
Sbjct: 796 SCCDYW 801
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 224/432 (51%), Gaps = 4/432 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I ++ N+C A + Y MR NF P VLKAC F LG H +VK G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV +L+ +Y G LA A +FD I +K+VVSW+ +I Y G L+EA+++ R
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRN-VFVATSLVDLYAK 178
+ +KP ++ + +L DL K +H YV GK G++ V + T+L+D+Y K
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
C N+ ARRVFD + + I+SW++MI Y E + +F M E + P TM+ +
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+ C + GALELG +F RN F + VL T IDMY KCG + A VF K KD
Sbjct: 335 VKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDL 394
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
++W+A++S + N + AF +F + CGI+PN T V LL C AG ++ G+ +
Sbjct: 395 MMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSY 454
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ + MI VD+ G +D AH L + + +W A+++G +H +
Sbjct: 455 IDKQGIKGDMILKTS-FVDMYANCGDIDTAHRLFAE-ATDRDISMWNAMISGFAMHGHGE 512
Query: 419 LAEHVLNQLIAL 430
A + ++ AL
Sbjct: 513 AALELFEEMEAL 524
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 163/322 (50%), Gaps = 14/322 (4%)
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
N + +I+ YI +A ++ + + D+F I VL AC + + +H
Sbjct: 88 NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVH 147
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
G+V + G +VFV +L+ +Y++ G++ AR +FD++ KD+VSWS+MI+ Y +G
Sbjct: 148 GFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLD 207
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL--SNPVLGTT 272
EALD+ +M +KP M+ + A L L+LG +++ RN S L T
Sbjct: 208 EALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTA 267
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL----SMNGYVKVAFGVFGQLEKCG 328
LIDMY KC +A A +VF + + W A+++ ++N V++ + G+ G
Sbjct: 268 LIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGE----G 323
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+ PN T + L+ C AG ++ G+ ++ F+L+ ++ +D+ G+ G +
Sbjct: 324 MFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLA--TAFIDMYGKCGDVRS 381
Query: 388 AHELIKSMPMEPNAIVWGALLA 409
A + S + + ++W A+++
Sbjct: 382 ARSVFDSFKSK-DLMMWSAMIS 402
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/604 (43%), Positives = 385/604 (63%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G ++ A E Y+ M+ EG +P T+ +L AC G HS +VK G
Sbjct: 417 MIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDG 476
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V+ +L+++Y CG + DA +F+ + K+++SWTA+I G G EA+ +F+
Sbjct: 477 FMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQ 536
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GLKP+ + +L AC+ L + IH V EAG + VA +LV++Y+ CG
Sbjct: 537 DMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCG 596
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ AR+VFD+M ++DIV++++MI GYA++ KEAL +F +Q E LKP+ T + +L+
Sbjct: 597 SVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLN 656
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+ G+LE S + ++ +LS+ LG L+ YAKCG + A VF +M ++ +
Sbjct: 657 ACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVIS 716
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G + +G + +F +++ GI+P+ TFV LL C+HAGL++EGR++F SMS
Sbjct: 717 WNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMS 776
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R F +TP IEHYGCMVDLLGR+GQLDE LIK+MP + N +WGALL CR+H +A
Sbjct: 777 RDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVA 836
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + L+P N+ YV LS++Y+A+ W+ AAK+R +M +G+ K G SW+EV
Sbjct: 837 ERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDK 896
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H F+ D SHP SEKIY++LD+L +K G+VP T V+ D++E EK+ + HSE+L
Sbjct: 897 LHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERL 956
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+GLI+T P IRI KNLRVC DCH A K I+KI REI+ RD NRFH F +G CSC
Sbjct: 957 AIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSC 1016
Query: 601 KDFW 604
D+W
Sbjct: 1017 GDYW 1020
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 217/414 (52%), Gaps = 2/414 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+V + A++ M+ G T +L +C + G H +KA
Sbjct: 215 MVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKAR 274
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D V +LN+Y CG + +A +VFD + K+VVSWT II GY + G+ E A +F+
Sbjct: 275 LLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQ 334
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ P+ + + VL A + L K +H ++ AG ++ V T+LV +YAKCG
Sbjct: 335 KMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCG 394
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + R+VF+++ +D+++W++MI G A G +EA ++++ MQRE + P T V +L+
Sbjct: 395 SYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLN 454
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC + AL G S + ++ F+ + + LI MYA+CG + A +F +M KD +
Sbjct: 455 ACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIIS 514
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ GL+ +G A VF +++ G++PN T+ +L C+ +D GR+ +
Sbjct: 515 WTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVI 574
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
L +V++ G + +A ++ M + + + + A++ G H
Sbjct: 575 EA-GLATDAHVANTLVNMYSMCGSVKDARQVFDRMT-QRDIVAYNAMIGGYAAH 626
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 212/404 (52%), Gaps = 14/404 (3%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A++ ++ +G + + +LK C D G H I++ D++ +L+N
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184
Query: 74 LYVHCGYLADALKVFDDI--PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+Y+ CG + +A +V++ + ++ V SW A++ GY+ G +EEA+ + R + GL
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF---VATSLVDLYAKCGNMEKARRV 188
+ +R+L++C L + IH EA K R +F VA ++++YAKCG++ +AR V
Sbjct: 245 ATTMRLLSSCKSPSALECGREIH---VEAMKARLLFDVNVANCILNMYAKCGSIHEAREV 301
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD+M K +VSW+ +I GYA G + A ++F MQ+E + P T + VL+A + AL
Sbjct: 302 FDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+ G S + S+ +GT L+ MYAKCG +VF ++ ++D + WN ++ GL
Sbjct: 362 KWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 421
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+ G + A ++ Q+++ G+ PN T+V LL C + + GR+ SRV M
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIH---SRVVKDGFM 478
Query: 369 --IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
I ++ + R G + +A L M + + I W A++ G
Sbjct: 479 FDISVQNALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGG 521
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/637 (42%), Positives = 394/637 (61%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG N A++ Y M + G LP +++FPF+LK+CA+ G + H ++K G
Sbjct: 36 MFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLG 95
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
D D +V TSL+++Y G L DA KVFD
Sbjct: 96 YDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFD 155
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+I K+VVSW A+ISGY+ N +EA+ +++ ++ +KPD ++V V++AC Q G +
Sbjct: 156 EISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIEL 215
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++ + G G N+ + L+DLY+KCG +E A +F + +KD++SW+++I G+
Sbjct: 216 GRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTH 275
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM-ERNEFLSNPV 268
KEAL +F M R P TM+ VL ACA LGA+++G W ++ +R + ++N
Sbjct: 276 MNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNAS 335
Query: 269 -LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMYAKCG + A +VF M + WNA++ G +M+G AF +F ++ K
Sbjct: 336 SLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKN 395
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI P+ TFVGLL C+H+G++D GR F SMS+ + +TP +EHYGCM+DLLG G E
Sbjct: 396 GIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKE 455
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E+I++MPMEP+ ++W +LL C++H +L E LI +EP N G+YVLLSNIY+
Sbjct: 456 AKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYAT 515
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +W+ AKIR+++ DKGI+K GCS +E+D VVHEF++GD HP + +IY L+E+
Sbjct: 516 AGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEML 575
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
++ GFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRVC +C
Sbjct: 576 MEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 635
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
HEA KLISKI REII RD R H +G SC D+W
Sbjct: 636 HEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 201/386 (52%), Gaps = 33/386 (8%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
L H L+ A+ +F+ I + N++ W + G+ + A+ ++ ++ GL P+S+S
Sbjct: 8 LSPHFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYS 67
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME---------- 183
+L +C + L + IHG+V + G +++V TSL+ +YA+ G +E
Sbjct: 68 FPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSS 127
Query: 184 ---------------------KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
AR++FD++ KD+VSW++MI GY KEAL+++ +
Sbjct: 128 HRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKD 187
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M + N+KP+ TMV V+SACA G++ELG S++E + F SN + LID+Y+KCG
Sbjct: 188 MMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGE 247
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ AC +F+ + KD + WN ++ G + K A +F ++ + G PN T + +L
Sbjct: 248 VETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPA 307
Query: 343 CTHAGLVDEGRQFFNSMS-RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C H G +D GR ++ R+ +T ++D+ + G ++ A ++ SM + +
Sbjct: 308 CAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM-LTRSL 366
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQL 427
W A++ G +H K + A + +++
Sbjct: 367 SSWNAMIFGFAMHGKANAAFDLFSKM 392
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 273/637 (42%), Positives = 395/637 (62%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG + ++ Y M + G LP ++TFPF+LK+CA+ F G + H ++K G
Sbjct: 35 MIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLG 94
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
D D +V TSL+++YV L DA KVFD
Sbjct: 95 FDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFD 154
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+ISGY G +EA+ +F ++ ++PD + V VL+AC G +
Sbjct: 155 EIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIEL 214
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H +V++ G N+ + +L+DLY+KCG +E A +F + KD++SW+++I GY
Sbjct: 215 GRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTH 274
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME-RNEFLSNPV 268
KEAL +F M R P TM+ VL ACA LGA+++G W +++ R + ++N
Sbjct: 275 MNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 334
Query: 269 -LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMYAKCG + A +VF M K WNA++ G +M+G +F +F ++ K
Sbjct: 335 SLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 394
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI+P+ TFVGLL C+H+G++D GR F SM++ + +TP +EHYGCM+DLLG SG E
Sbjct: 395 GIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKE 454
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E+I +M MEP+ ++W +LL C++H +LAE LI +EP N +Y+LLSNIY++
Sbjct: 455 AEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYAS 514
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +W D A+IR+++ K ++K+ GCS +EVD VV EF+VGD HP + +IY L+E+
Sbjct: 515 AGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVL 574
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRVC +C
Sbjct: 575 LEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 634
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
HEA KL+SKI REI+ RD RFH F +G CSC D+W
Sbjct: 635 HEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 254/604 (42%), Positives = 371/604 (61%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + ++ A + + M+NE P N TF VL C +LG + H I ++G
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESG 562
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D + +L+N+Y+ CG L DA VF + ++V+SWTA+I G ++G +AI +F
Sbjct: 563 LQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFW 622
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + G +P + +L CT L K + Y+ +G + V +L+ Y+K G
Sbjct: 623 QMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSG 682
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M AR VFD+MP +DIVSW+ +I GYA NG + A++ Y MQ +++ P ++ V +L+
Sbjct: 683 SMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLN 742
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+S ALE G + + + + + +G LI MYAKCG +A +VF + +K+ V
Sbjct: 743 ACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVT 802
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+++ + +G A G F +EK GI+P+G+TF +L C HAGLV EG Q F+SM
Sbjct: 803 WNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSME 862
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P IEHYGC+V LLGR+ + EA LI MP P+A VW LL CR+H LA
Sbjct: 863 SEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALA 922
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
EH N + L N Y+LLSN+Y+A+ +W+D AKIR +M +GI+K G SW+EVD +
Sbjct: 923 EHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNI 982
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+HEF+ D SHP + +IY++L L+ +++ AG+ P T HVL D+ + ++ L HSE+L
Sbjct: 983 IHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERL 1042
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+GLI T P IRI KNLR+CGDCH A K ISK+ GREII RD+NRFH F G CSC
Sbjct: 1043 AIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSC 1102
Query: 601 KDFW 604
+D+W
Sbjct: 1103 EDYW 1106
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 218/414 (52%), Gaps = 2/414 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + A+ Y M++EG P TF +L ACA + G H I+++G
Sbjct: 402 IIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSG 461
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + + +L+N+Y CG L +A VF+ ++V+SW ++I+G+ G+ E A +F+
Sbjct: 462 IKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQ 521
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + L+PD+ + VL+ C L K IHG + E+G +V + +L+++Y +CG
Sbjct: 522 EMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCG 581
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ AR VF + +D++SW++MI G A G +A+++F+ MQ E +P T +L
Sbjct: 582 SLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILK 641
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C S L+ G +++ + + + +G LI Y+K G M A +VF +M +D V
Sbjct: 642 VCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVS 701
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++G + NG + A Q+++ + PN +FV LL C+ ++EG++ +
Sbjct: 702 WNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIV 761
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ L + ++ + + G EA E+ ++ +E N + W A++ H
Sbjct: 762 KR-KLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWNAMINAYAQH 813
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 208/395 (52%), Gaps = 2/395 (0%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
+ M +EG P T+ +L A G R H L V+ GL+ D V T+L+ + V
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVR 136
CG + A + F D++VV + A+I+ G+ EA + R+ G+ + + +
Sbjct: 276 RCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLS 335
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
+L AC+ L K IH +++E G +V + +L+ +YA+CG++ KAR +F MP++D
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASS 256
++SW+++I GYA EA+ ++ MQ E +KP T + +LSACA+ A G
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
+ R+ SN L L++MY +CG + +A VF + +D + WN++++G + +G +
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A+ +F +++ ++P+ TF +L GC + ++ G+Q ++ L + ++
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNALI 574
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
++ R G L +A + S+ + + W A++ GC
Sbjct: 575 NMYIRCGSLQDARNVFHSL-QHRDVMSWTAMIGGC 608
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 218/425 (51%), Gaps = 4/425 (0%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ A + + M+N GF+P T+ +L AC + + G + HS I+KAG D V+ SL
Sbjct: 110 KKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSL 169
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
L++Y CG L A +VF I ++VVS+ ++ Y + ++E + +F ++ G+ PD
Sbjct: 170 LSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDK 229
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+ + +L A T L K IH E G ++ V T+LV + +CG+++ A++ F
Sbjct: 230 VTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKG 289
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
++D+V ++++I A +G EA + +Y M+ + + T + +L+AC++ ALE G
Sbjct: 290 TADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAG 349
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
S + + S+ +G LI MYA+CG + +A ++F M +D + WNA+++G +
Sbjct: 350 KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARR 409
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
A ++ Q++ G++P TF+ LL C ++ +G+ + R +
Sbjct: 410 EDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHL 468
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--A 429
++++ R G L EA + + + I W +++AG H + A + ++
Sbjct: 469 ANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQNEE 527
Query: 430 LEPWN 434
LEP N
Sbjct: 528 LEPDN 532
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 206/379 (54%), Gaps = 2/379 (0%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ +L+ C R+ R H+ +V+A + D F+ L+N+YV C + DA +VF ++
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
P ++V+SW ++IS Y +G ++A +F + + G P+ + + +LTAC +L K
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
IH + +AG R+ V SL+ +Y KCG++ +AR+VF + +D+VS+++M+ YA
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
+ KE L +F M E + P+ T + +L A + L+ G S+ +GT
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
L+ M +CG + A + F+ D+D VV+NA+++ L+ +G+ AF + ++ G+
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
N T++ +L C+ + ++ G+ + +S + ++ ++ + R G L +A EL
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISED-GHSSDVQIGNALISMYARCGDLPKAREL 387
Query: 392 IKSMPMEPNAIVWGALLAG 410
+MP + + I W A++AG
Sbjct: 388 FYTMP-KRDLISWNAIIAG 405
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 154/290 (53%), Gaps = 2/290 (0%)
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
R + + + V +L CT+ L AK IH + EA G ++F++ L+++Y KC ++
Sbjct: 21 RPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLD 80
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
A +VF +MP +D++SW+S+I YA GF K+A +F MQ P T + +L+AC S
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
LE G S + + + +P + +L+ MY KCG + +A +VF + +D V +N +
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTM 200
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
+ + YVK G+FGQ+ GI P+ T++ LL T ++DEG++ + ++
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR-IHKLTVEEG 259
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
L I +V + R G +D A + K + + +V+ AL+A H
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGTA-DRDVVVYNALIAALAQH 308
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/604 (43%), Positives = 387/604 (64%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + N+ ++ +E Y MR G P FTFP+VLKAC DF L H I+K G
Sbjct: 125 IIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYG 184
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV+ L+ LY CG++ A VFD + + +VSWT+IISGY G EA+ MF
Sbjct: 185 FGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFS 244
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + G+KPD ++V +L A T + DL + IHG+V + G + SL YAKCG
Sbjct: 245 QMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCG 304
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A+ FDQM +++ W++MI GYA NG +EA+++F+ M N+KP+ T+ +
Sbjct: 305 LVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVL 364
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A +G+LEL W ++ ++ + S+ + T+LIDMYAKCG + A +VF DKD V+
Sbjct: 365 ASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVM 424
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ G ++G A ++ +++ G+ PN TF+GLL C H+GLV EG + F+ M
Sbjct: 425 WSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM- 483
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ F + P EHY C+VDLLGR+G L EA I +P+EP VWGALL+ C++++ L
Sbjct: 484 KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLG 543
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E+ N+L +L+P+N+G+YV LSN+Y++S W+ A +R +M +KG+ K G S +E++G
Sbjct: 544 EYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGK 603
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+ F VGD SHP++++I+ +L L +LK GFVP T+ VL D+ EEK+ L+ HSE++
Sbjct: 604 LQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERI 663
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+GLI+TAP +RI KNLR C +CH AIKLISK+ REIIVRD NRFH F +G CSC
Sbjct: 664 AVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSC 723
Query: 601 KDFW 604
D+W
Sbjct: 724 GDYW 727
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 207/421 (49%), Gaps = 23/421 (5%)
Query: 5 FVSNDCFQHAIE---FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
FV CF A+ F N + F +F + + + H Q+ H+ +V +GL
Sbjct: 31 FVKYLCFSSALHPEHFVN--HDHCFNSDSFYASLIDNSTHKRHLDQI----HNRLVISGL 84
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ F+ T L+N + G + A K+FD+ +V W AII Y + + M+R
Sbjct: 85 QHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRW 144
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ G+ PD F+ VL ACT+L D + IHG + + G G +VFV LV LYAKCG+
Sbjct: 145 MRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGH 204
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ A+ VFD + + IVSW+S+I GYA NG EAL MF M+ +KP++ +V +L A
Sbjct: 205 IGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRA 264
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
+ LE G F+ + P L +L YAKCG + A F +MK + ++W
Sbjct: 265 YTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMW 324
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA++SG + NG+ + A +F + I+P+ T + G ++ + + +S+
Sbjct: 325 NAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSK 384
Query: 362 ------VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
+F T +I D+ + G ++ A + + + ++W A++ G LH
Sbjct: 385 SNYGSDIFVNTSLI-------DMYAKCGSVEFARRVFDRNS-DKDVVMWSAMIMGYGLHG 436
Query: 416 K 416
+
Sbjct: 437 Q 437
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/604 (42%), Positives = 381/604 (63%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G ++ A E YN M+ EG +P T+ +L AC G HS + KAG
Sbjct: 299 MIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAG 358
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V+ +L+++Y CG + DA VFD + K+V+SWTA+I G G EA+ +++
Sbjct: 359 FTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQ 418
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++P+ + +L AC+ L + IH V EAG + V +LV++Y+ CG
Sbjct: 419 EMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCG 478
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ AR+VFD+M ++DIV++++MI GYA++ KEAL +F +Q E LKP+ T + +L+
Sbjct: 479 SVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLN 538
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+ G+LE + + + F S+ +G L+ YAKCG + A VF +M ++ +
Sbjct: 539 ACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVIS 598
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G + +G + A +F +++ G++P+ TFV LL C+HAGL++EGR++F SMS
Sbjct: 599 WNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMS 658
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ F++ P IEHYGCMVDLLGR+GQLDEA LIK+MP + N +WGALL CR+H +A
Sbjct: 659 QDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVA 718
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + L+ N+ YV LS++Y+A+ W+ AAK+R +M +G+ K G SW++V
Sbjct: 719 ERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDK 778
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H F+ D SHP SEKIY++LD L +K G+VP T V+ D++E EK+ + HSE+L
Sbjct: 779 LHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERL 838
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+GLI+T P I I KNLRVC DCH A K ISKI REII RD NRFH F +G CSC
Sbjct: 839 AIAYGLISTPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSC 898
Query: 601 KDFW 604
D+W
Sbjct: 899 GDYW 902
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 218/415 (52%), Gaps = 4/415 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G++ + A++ M+ G P T L +C + G H ++AG
Sbjct: 97 MVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAG 156
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D V +LN+Y CG + +A +VFD + K+VVSWT I GY + G E A +F+
Sbjct: 157 LLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQ 216
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ P+ + + VL A + L K +H + AG + V T+LV +YAKCG
Sbjct: 217 KMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCG 276
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + R+VF+++ +D+++W++MI G A G+ +EA +++ MQRE + P T V +L+
Sbjct: 277 SYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLN 336
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC + AL G S + + F S+ + LI MY++CG + A VF +M KD +
Sbjct: 337 ACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVIS 396
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ GL+ +G+ A V+ ++++ G++PN T+ +L C+ ++ GR+ +
Sbjct: 397 WTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVV 456
Query: 361 RVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
T H G +V++ G + +A ++ M ++ + + + A++ G H
Sbjct: 457 EAGLATD--AHVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGYAAH 508
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 219/399 (54%), Gaps = 4/399 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A++ ++ +G + + +LK C D G + H I++ D++ +L+N
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 74 LYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+Y+ CG + +A +V+ + ++ V SW A++ GYI G +E+A+ + R++ GL PD
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+I+ L++C G L + IH +AG +V VA ++++YAKCG++E+AR VFD+
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M +K +VSW+ I GYA G + A ++F M++E + P T + VL+A +S AL+ G
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
S + S+ +GT L+ MYAKCG +VF ++ ++D + WN ++ GL+
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
GY + A V+ Q+++ G+ PN T+V LL C ++ + G++ + +++ T I
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKA-GFTSDIGV 365
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++ + R G + +A + M + + I W A++ G
Sbjct: 366 QNALISMYSRCGSIKDARLVFDKM-VRKDVISWTAMIGG 403
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 275/637 (43%), Positives = 399/637 (62%), Gaps = 41/637 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG + A++ Y M + G LP ++TFPF+LK+CA+ + G + H ++K G
Sbjct: 60 MFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLG 119
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
D D +V TSL+++Y G L DA KVFD
Sbjct: 120 FDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFD 179
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLS 148
+IP K+VVSW A+ISGY+ GN +EA+ +F+ ++ ++PD ++V V++AC Q +
Sbjct: 180 EIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIE 239
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+ +H ++N+ G N+ + +L+DLY+K G +E A +FD + KD++SW+++I GY
Sbjct: 240 LGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYT 299
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
KEAL +F M R P TM+ +L ACA LGA+++G W ++ N+ L V
Sbjct: 300 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI--NKKLKGVV 357
Query: 269 -----LGTTLIDMYAKCGRMAQACKVF-REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
L T+LIDMYAKCG + A +VF M ++ WNA++SG +M+G AF +F
Sbjct: 358 TNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFS 417
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
++ GI+P+ TFVGLL C+H+G++D GR F SM+R + +TP +EHYGCM+DLLG S
Sbjct: 418 RMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHS 477
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLS 442
G EA E+I +MPMEP+ ++W +LL C++H +L E +LI +EP NSG+YVLLS
Sbjct: 478 GLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLS 537
Query: 443 NIYSASHKWNDAAKIRSMMGDKGI-QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
NIY+A+ +WN+ AKIR+++ DKG+ +K+ GCS +E+D VVHEF++GD HP + +IY L
Sbjct: 538 NIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGML 597
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+E+ L+ AGFVP T VL ++EEE ++ L HSEKLA+AFGLI+T P + I KNL
Sbjct: 598 EEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNL 657
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
RVC +CHEA KLISKI REII RD RF F +G C
Sbjct: 658 RVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 206/412 (50%), Gaps = 37/412 (8%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYV---HCGYLADALKVFDDIPDKNVVSWTAIISGYINE 109
H+ ++K GL + + LL V H A+ VFD I + N++ W + G+
Sbjct: 8 HAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHALS 67
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+ A+ ++ ++ GL PDS++ +L +C + + IHG+V + G +++V
Sbjct: 68 SDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVH 127
Query: 170 TSLVDLYAKCGNMEKARRV-------------------------------FDQMPEKDIV 198
TSL+ +YA+ G +E AR+V FD++P KD+V
Sbjct: 128 TSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVV 187
Query: 199 SWSSMIQGYASNGFPKEALDMFYN-MQRENLKPEYYTMVGVLSACASLGALELGVWASSF 257
SW++MI GY G KEAL++F M N++P+ TMV V+SACA ++ELG S+
Sbjct: 188 SWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSW 247
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ + F SN + LID+Y+K G + AC++F + +KD + WN ++ G + K A
Sbjct: 248 INDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEA 307
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS--LTPMIEHYGCM 375
+F ++ + G PN T + +L C H G +D GR +++ +T + +
Sbjct: 308 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSL 367
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+D+ + G +D A ++ S + W A+++G +H + + A + +++
Sbjct: 368 IDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRM 419
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 250/604 (41%), Positives = 378/604 (62%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI FV+ + A + Y +M+ G P TF +L A Q+G + H I KAG
Sbjct: 168 MIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAG 227
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + V TSL+ +Y CG ++ A +FD +P+KNVV+WT +I+GY +G ++ A+ +
Sbjct: 228 LELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLE 287
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + P+ + +L CT L K +H Y+ ++G GR ++V +L+ +Y KCG
Sbjct: 288 KMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCG 347
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++AR++F +P +D+V+W++M+ GYA GF EA+D+F MQ++ +KP+ T L+
Sbjct: 348 GLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALT 407
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+C+S L+ G + + + L + L+ MYAKCG M A VF +M +++ V
Sbjct: 408 SCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVA 467
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A+++G + +G + A F Q++K GI+P+ TF +L CTH GLV+EGR+ F SM
Sbjct: 468 WTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMY 527
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + PM+EHY C VDLLGR+G L+EA +I +MP +P VWGALL+ CR+H +
Sbjct: 528 LDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERG 587
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E ++ L+P + G YV LSNIY+A+ ++ DA K+R +M + + K G SW+EVDG
Sbjct: 588 ERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGK 647
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F V D SHP +++IY++L +L ++K G+VP T VL D++EE+K L HSE+L
Sbjct: 648 VHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERL 707
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+ +GL+ T P IRI KNLRVCGDCH A K ISK+ GREII RD +RFH F++G CSC
Sbjct: 708 AITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSC 767
Query: 601 KDFW 604
DFW
Sbjct: 768 GDFW 771
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 220/418 (52%), Gaps = 4/418 (0%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
+ A+ N+M +G + F +L+ CAR + G H+ I+K+G+ + +++ +
Sbjct: 77 LKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT 136
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
LL++Y CG L DA +VFD I D+N+VSWTA+I ++ EA + + G KPD
Sbjct: 137 LLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPD 196
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ V +L A T L + +H + +AG V TSLV +YAKCG++ KA+ +FD
Sbjct: 197 KVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFD 256
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
++PEK++V+W+ +I GYA G AL++ MQ+ + P T +L C + ALE
Sbjct: 257 KLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEH 316
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G ++ ++ + + LI MY KCG + +A K+F ++ +D V W A+V+G +
Sbjct: 317 GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQ 376
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMI 369
G+ A +F ++++ GI+P+ TF L C+ + EG+ + +SL +
Sbjct: 377 LGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYL 436
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ +V + + G +D+A + M E N + W A++ GC H + A Q+
Sbjct: 437 Q--SALVSMYAKCGSMDDARLVFNQMS-ERNVVAWTAMITGCAQHGRCREALEYFEQM 491
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 162/308 (52%), Gaps = 2/308 (0%)
Query: 103 ISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK 162
+S +G L+EA+ + ++ +G + S +L C +L L + +H + ++G
Sbjct: 68 VSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 127
Query: 163 GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
N ++ +L+ +YAKCG++ ARRVFD + +++IVSW++MI+ + + EA +
Sbjct: 128 QPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYET 187
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M+ KP+ T V +L+A + L++G + + P +GT+L+ MYAKCG
Sbjct: 188 MKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGD 247
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+++A +F ++ +K+ V W +++G + G V VA + ++++ + PN T+ +L G
Sbjct: 248 ISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQG 307
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
CT ++ G++ + + I ++ + + G L EA +L +P + +
Sbjct: 308 CTTPLALEHGKKVHRYIIQS-GYGREIWVVNALITMYCKCGGLKEARKLFGDLPHR-DVV 365
Query: 403 VWGALLAG 410
W A++ G
Sbjct: 366 TWTAMVTG 373
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 10/249 (4%)
Query: 190 DQMP------EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
DQ+P + D ++ S + G KEAL + M + + G+L CA
Sbjct: 48 DQLPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECA 107
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
L +LE G + + ++ N L TL+ MYAKCG + A +VF ++D++ V W A
Sbjct: 108 RLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTA 167
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV- 362
++ A+ + ++ G +P+ TFV LL T+ L+ G++ +++
Sbjct: 168 MIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAG 227
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
L P + +V + + G + +A + +P E N + W L+AG + D+A
Sbjct: 228 LELEPRVG--TSLVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQVDVALE 284
Query: 423 VLNQLIALE 431
+L ++ E
Sbjct: 285 LLEKMQQAE 293
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 255/605 (42%), Positives = 376/605 (62%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI FV+ + A + Y +M+ G P TF +L A QLG + H IV+AG
Sbjct: 119 MIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAG 178
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + V TSL+ +Y CG ++ A +FD +P+KNVV+WT +I+GY +G ++ A+ +
Sbjct: 179 LELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLE 238
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + P+ + +L CT L K +H Y+ ++G GR ++V SL+ +Y KCG
Sbjct: 239 TMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCG 298
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E+AR++F +P +D+V+W++M+ GYA GF EA+++F MQ++ +KP+ T VL+
Sbjct: 299 GLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLT 358
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+C+S L+ G + + + L + L+ MYAKCG M A VF +M +++ V
Sbjct: 359 SCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVA 418
Query: 301 WNAVVSGL-SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W A+++G + +G + A F Q++K GI+P+ TF +L CTH GLV+EGR+ F SM
Sbjct: 419 WTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSM 478
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + PM+EHY C VDLLGR+G L+EA +I SMP P VWGALL+ CR+H +
Sbjct: 479 YLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVER 538
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E ++ L+P + G YV LS+IY+A+ ++ DA K+R +M + + K G SW+EVDG
Sbjct: 539 GERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDG 598
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F V D SHP SE+IY +L +L ++K G+VP T VL D++EE+K+ L HSE+
Sbjct: 599 KVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSER 658
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+ +GL+ T P IRI KNLRVCGDCH A K ISK+ GREII RD RFH F +G CS
Sbjct: 659 LAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCS 718
Query: 600 CKDFW 604
C DFW
Sbjct: 719 CGDFW 723
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 218/402 (54%), Gaps = 4/402 (0%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
+ A+ N+M +G + F +L+ CAR + G H+ I+K+G+ + +++ +
Sbjct: 28 LKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT 87
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
LL++Y CG L DA +VFD I D+N+VSWTA+I ++ EA + + G KPD
Sbjct: 88 LLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPD 147
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ V +L A T L + +H + EAG V TSLV +YAKCG++ KAR +FD
Sbjct: 148 KVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFD 207
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
++PEK++V+W+ +I GYA G AL++ MQ+ + P T +L C + ALE
Sbjct: 208 RLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEH 267
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G ++ ++ + + +LI MY KCG + +A K+F ++ +D V W A+V+G +
Sbjct: 268 GKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQ 327
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMI 369
G+ A +F ++++ GI+P+ TF +L C+ + EG++ + ++L +
Sbjct: 328 LGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYL 387
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ +V + + G +D+A + M E N + W A++ GC
Sbjct: 388 Q--SALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAIITGC 426
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 160/315 (50%), Gaps = 16/315 (5%)
Query: 103 ISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK 162
+S G L+EA+ + ++ +G + S +L C +L L + +H + ++G
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 163 GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
N ++ +L+ +YAKCG++ ARRVFD + +++IVSW++MI+ + + EA +
Sbjct: 79 QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M+ KP+ T V +L+A + L+LG + P +GT+L+ MYAKCG
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGD 198
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+++A +F + +K+ V W +++G + G V VA + +++ + PN TF +L G
Sbjct: 199 ISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQG 258
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-------CMVDLLGRSGQLDEAHELIKSM 395
CT ++ G++ + + YG ++ + + G L+EA +L +
Sbjct: 259 CTTPAALEHGKKVHRYI--------IQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDL 310
Query: 396 PMEPNAIVWGALLAG 410
P + + W A++ G
Sbjct: 311 PHR-DVVTWTAMVTG 324
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/604 (41%), Positives = 386/604 (63%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ + ++ A E + M+ G P +F +L C G H+ + AG
Sbjct: 230 MVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAG 289
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D V TSL+ +Y CG + A +VFD++ ++VVSWT +I GY GN+E+A +F
Sbjct: 290 LVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFA 349
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++PD + + ++ AC +L+ A+ IH V+ AG G ++ V+T+LV +YAKCG
Sbjct: 350 TMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCG 409
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR+VFD MP +D+VSWS+MI Y NG+ EA + F+ M+R N++P+ T + +L+
Sbjct: 410 AIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLN 469
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC LGAL++G+ + + + +S+ LG LI M AK G + +A +F M +D +
Sbjct: 470 ACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVIT 529
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G S++G + A +F ++ K +PN TFVG+L C+ AG VDEGR+FF +
Sbjct: 530 WNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLL 589
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P ++ YGCMVDLLGR+G+LDEA LIKSMP++P + +W +LL CR+H D+A
Sbjct: 590 EGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVA 649
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + + ++P++ YV LS++Y+A+ W + AK+R +M +GI+K +GC+W+EV G
Sbjct: 650 ERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGK 709
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F+V D SHPL +IY++L L +K G++P T +VL D+ E++K+ ++ HSEKL
Sbjct: 710 VHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKL 769
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+G+++ IRI KNLRVC DCH A K ISK+TGREII RD +RFH F +G CSC
Sbjct: 770 AIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSC 829
Query: 601 KDFW 604
D+W
Sbjct: 830 GDYW 833
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 228/428 (53%), Gaps = 2/428 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + A + M +EG P+ TF VL AC+ G H+ +V AG
Sbjct: 129 LIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAG 188
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + T+L+++YV G + DA +VFD + ++V ++ ++ GY G+ E+A +F
Sbjct: 189 FVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFY 248
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ GLKP+ S + +L C L+ K +H AG ++ VATSL+ +Y CG
Sbjct: 249 RMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCG 308
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E ARRVFD M +D+VSW+ MI+GYA NG ++A +F MQ E ++P+ T + +++
Sbjct: 309 SIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMN 368
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA L S ++ F ++ ++ T L+ MYAKCG + A +VF M +D V
Sbjct: 369 ACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVS 428
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ NGY AF F +++ I+P+G T++ LL C H G +D G + +
Sbjct: 429 WSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAI 488
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L + ++ + + G ++ A + +M + + I W A++ G LH A
Sbjct: 489 KA-DLVSHVPLGNALIIMNAKHGSVERARYIFDTM-VRRDVITWNAMIGGYSLHGNAREA 546
Query: 421 EHVLNQLI 428
++ ++++
Sbjct: 547 LYLFDRML 554
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 207/379 (54%), Gaps = 2/379 (0%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ + + C D LG + I++ G + + +L+ LY CG + +A ++FD +
Sbjct: 59 TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
+K VV+W A+I+GY G+++EA +FR+++ GL+P + + VL AC+ L+ K
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+H V AG + + T+LV +Y K G+M+ AR+VFD + +D+ +++ M+ GYA +G
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG 238
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
++A ++FY MQ+ LKP + + +L C + AL G + + + + T
Sbjct: 239 DWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVAT 298
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
+LI MY CG + A +VF MK +D V W ++ G + NG ++ AFG+F +++ GIQP
Sbjct: 299 SLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQP 358
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ T++ ++ C + ++ R+ + + T ++ +V + + G + +A ++
Sbjct: 359 DRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVST-ALVHMYAKCGAIKDARQV 417
Query: 392 IKSMPMEPNAIVWGALLAG 410
+MP + + W A++
Sbjct: 418 FDAMPRR-DVVSWSAMIGA 435
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 177/353 (50%), Gaps = 47/353 (13%)
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A ++ +RL G DS + V++ CT+L D + K + ++ + G+ N++ +L+
Sbjct: 41 ANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIK 100
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
LY+ CGN+ +AR++FD + K +V+W+++I GYA G KEA +F M E L+P T
Sbjct: 101 LYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIIT 160
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+ VL AC+S L G + + F+S+ +GT L+ MY K G M A +VF +
Sbjct: 161 FLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLH 220
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG------------ 342
+D +N +V G + +G + AF +F ++++ G++PN +F+ +L G
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKA 280
Query: 343 ----CTHAGLVDE-------------------GRQFFNSMS--RVFSLTPMIEHYGCMVD 377
C +AGLVD+ R+ F++M V S T MIE Y
Sbjct: 281 VHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGY----- 335
Query: 378 LLGRSGQLDEAHELIKSMP---MEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+G +++A L +M ++P+ I + ++ C + + A + +Q+
Sbjct: 336 --AENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQV 386
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/605 (42%), Positives = 376/605 (62%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V N IE + M G T V ACA LG HS +KA
Sbjct: 323 MISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAA 382
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
LD + +LL++Y CG L A++VF+ + +K VVSWT++I+GY+ EG + AI +F
Sbjct: 383 TLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLF 442
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ RG+ PD +++ +L AC G+L + K +H Y+ E N FV+ +L D+YAKC
Sbjct: 443 DEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKC 502
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+M+ A VF M +KD++SW++MI GY N P EAL +F MQRE+ KP+ T+ +L
Sbjct: 503 GSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACIL 561
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACASL AL+ G + RN + + + ++DMY KCG + A +F + +KD V
Sbjct: 562 PACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLV 621
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W +++G M+GY A F Q+ GI+P+ +F+ +L C+H+GL+DEG + FN M
Sbjct: 622 SWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIM 681
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + P +EHY CMVDLL R+G L +AH+ IK+MP++P+A +WGALL GCR+H L
Sbjct: 682 KKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKL 741
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE V ++ LEP N+G YVLL+NIY+ + KW + K+R +G +G++K GCSW+E+ G
Sbjct: 742 AEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKG 801
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
++ F+ GD S P ++KI L L +K+K G+ P T + L + +E EK+ L HSEK
Sbjct: 802 KINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEK 861
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFG++ P IR+ KNLRVCGDCHE K +SK REII+RD++RFH F +GSCS
Sbjct: 862 LAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCS 921
Query: 600 CKDFW 604
C+ +W
Sbjct: 922 CRGYW 926
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 229/453 (50%), Gaps = 11/453 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + + +I + M G P ++TF +LK A + G + H LI K G
Sbjct: 222 MISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLG 281
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V SL++ Y + A K+FD++ D++V+SW ++ISGY+ G + I +F
Sbjct: 282 FNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFI 341
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVATSLVDLYAKC 179
++L G+ D ++V V AC +G L K +H Y + A R V +L+D+Y+KC
Sbjct: 342 KMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKC 401
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ A RVF++M EK +VSW+SMI GY G A+ +F M+ + P+ Y + +L
Sbjct: 402 GDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSIL 461
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+ACA G L+ G ++ N +N + L DMYAKCG M A VF MK KD +
Sbjct: 462 NACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVI 521
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-S 358
WN ++ G + N A +F ++++ +P+G T +L C +D+GR+ +
Sbjct: 522 SWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYA 580
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ +S + + +VD+ + G L A L +P + + W ++AG +H
Sbjct: 581 LRNGYSEDKYVTN--AVVDMYVKCGLLVLARSLFDMIP-NKDLVSWTVMIAGYGMHGYGS 637
Query: 419 LAEHVLNQ--LIALEPWNSGNYVLLSNIYSASH 449
A + NQ + +EP +S +Y+ SH
Sbjct: 638 EAINTFNQMRMTGIEP---DEVSFISILYACSH 667
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 198/401 (49%), Gaps = 5/401 (1%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
++A+E S +N F + +L+ CA + G R S+I +G+ D +
Sbjct: 133 LKNAMELLCSSQNSNF--DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVK 190
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ +YV CG L + VFD + + + W +IS Y GN E+IN+F+++L G+KP+
Sbjct: 191 LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPN 250
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S++ +L + + + +HG + + G V SL+ Y + A+++FD
Sbjct: 251 SYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFD 310
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
++ ++D++SW+SMI GY NG +++F M + + TMV V ACA++G L L
Sbjct: 311 ELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLL 370
Query: 251 GVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G S+ + L V TL+DMY+KCG + A +VF M +K V W ++++G
Sbjct: 371 GKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYV 430
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
G A +F +++ G+ P+ +L C G + G+ + + R +L
Sbjct: 431 REGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYI-RENNLETNS 489
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ D+ + G + +AH++ M + + I W ++ G
Sbjct: 490 FVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMIGG 529
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 251/604 (41%), Positives = 371/604 (61%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + ++ A + + M+ EG P TF VL C +LG + H LI+++G
Sbjct: 558 MIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESG 617
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D + +L+N+Y+ CG L DA +VF + +NV+SWTA+I G+ ++G +A +F
Sbjct: 618 LQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFW 677
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + G KP + +L AC L K + ++ +G + V +L+ Y+K G
Sbjct: 678 QMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSG 737
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M AR+VFD+MP +DI+SW+ MI GYA NG AL Y MQ + + ++ V +L+
Sbjct: 738 SMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILN 797
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+S ALE G + + + + + +G LI MYAKCG + +A +VF +K+ V
Sbjct: 798 ACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVT 857
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+++ + +G A F ++K GI+P+G+TF +L C H+GLV EG + F+S+
Sbjct: 858 WNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLE 917
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
L+P IEHYGC+V LLGR+G+ EA LI MP P+A VW LL CR+H LA
Sbjct: 918 SQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALA 977
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
EH N + L N YVLLSN+Y+A+ +W+D AKIR +M +GI+K G SW+EVD +
Sbjct: 978 EHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNI 1037
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+HEF+ D SHP + +IY +L L+ +++ AG+ P T +VL ++++E ++ L HSE+L
Sbjct: 1038 IHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERL 1097
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+GL+ T P IRI KNLR+CGDCH A K ISK+ GREII RD+NRFH F G CSC
Sbjct: 1098 AIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSC 1157
Query: 601 KDFW 604
+DFW
Sbjct: 1158 EDFW 1161
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 222/411 (54%), Gaps = 4/411 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + ++ A E Y MR++G + T+ VL AC+ G HS I + G
Sbjct: 356 LIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVG 415
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + SL+++Y CG L A ++F+ +P ++++SW AII+GY + EA+ +++
Sbjct: 416 HSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYK 475
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+KP + + +L+ACT S K IH + +G N +A +L+++Y +CG
Sbjct: 476 QMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCG 535
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ +A+ VF+ +DI+SW+SMI G+A +G + A +F M++E L+P+ T VL
Sbjct: 536 SIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLV 595
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C + ALELG + + + LG LI+MY +CG + A +VF ++ ++ +
Sbjct: 596 GCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMS 655
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF-NSM 359
W A++ G + G + AF +F Q++ G +P +TF +L C + +DEG++ + +
Sbjct: 656 WTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHIL 715
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + L + + ++ +SG + +A ++ MP + + W ++AG
Sbjct: 716 NSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMP-NRDIMSWNKMIAG 763
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 216/400 (54%), Gaps = 4/400 (1%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ I + M +EG P T+ +L A G R H L V GL+ D V T+L
Sbjct: 266 EECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTAL 325
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
++V CG +A A + + D++VV + A+I+ G+ EEA + ++ G+ +
Sbjct: 326 ATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNR 385
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+ + VL AC+ L + IH +++E G +V + SL+ +YA+CG++ +AR +F+
Sbjct: 386 TTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNT 445
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
MP++D++SW+++I GYA EA+ ++ MQ E +KP T + +LSAC + A G
Sbjct: 446 MPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDG 505
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ R+ SN L L++MY +CG + +A VF + +D + WN++++G + +
Sbjct: 506 KMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQH 565
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G + A+ +F +++K G++P+ TF +L GC + ++ GRQ M + S + +
Sbjct: 566 GSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIH--MLIIESGLQLDVN 623
Query: 372 YG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G ++++ R G L +A+E+ S+ N + W A++ G
Sbjct: 624 LGNALINMYIRCGSLQDAYEVFHSL-RHRNVMSWTAMIGG 662
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 214/414 (51%), Gaps = 2/414 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + A++ Y M++EG P TF +L AC + G H I+++G
Sbjct: 457 IIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSG 516
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + + +L+N+Y CG + +A VF+ ++++SW ++I+G+ G+ E A +F
Sbjct: 517 IKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFL 576
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GL+PD + VL C L + IH + E+G +V + +L+++Y +CG
Sbjct: 577 EMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCG 636
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A VF + ++++SW++MI G+A G ++A ++F+ MQ + KP T +L
Sbjct: 637 SLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILK 696
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC S L+ G + + + + + +G LI Y+K G M A KVF +M ++D +
Sbjct: 697 ACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMS 756
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++G + NG A Q+++ G+ N +FV +L C+ ++EG++ +
Sbjct: 757 WNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIV 816
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + + ++ + + G L+EA E+ + E N + W A++ H
Sbjct: 817 KR-KMQGDVRVGAALISMYAKCGSLEEAQEVFDNF-TEKNVVTWNAMINAYAQH 868
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 200/375 (53%), Gaps = 2/375 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+++ C R+ R H+ +V+AG+ D F+ L+N+YV C ++DA +VF +P ++
Sbjct: 88 LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRD 147
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
V+SW ++IS Y +G ++A +F + G P + + +LTAC +L K IH
Sbjct: 148 VISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHS 207
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ EAG R+ V SL+++Y KC ++ AR+VF + +D+VS+++M+ YA + +E
Sbjct: 208 KIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEE 267
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
+ +F M E + P+ T + +L A + L+ G S+ +GT L
Sbjct: 268 CIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALAT 327
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
M+ +CG +A A + D+D VV+NA+++ L+ +G+ + AF + Q+ G+ N T
Sbjct: 328 MFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTT 387
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
++ +L C+ + + G + +S V + ++ ++ + R G L A EL +M
Sbjct: 388 YLSVLNACSTSKALGAGELIHSHISEV-GHSSDVQIGNSLISMYARCGDLPRARELFNTM 446
Query: 396 PMEPNAIVWGALLAG 410
P + + I W A++AG
Sbjct: 447 P-KRDLISWNAIIAG 460
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 215/423 (50%), Gaps = 4/423 (0%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ A + + M+ GF+P+ T+ +L AC + + G + HS I++AG D V+ SL
Sbjct: 165 KKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSL 224
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
LN+Y C L A +VF I ++VVS+ ++ Y + +EE I +F ++ G+ PD
Sbjct: 225 LNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDK 284
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+ + +L A T L K IH G ++ V T+L ++ +CG++ A++ +
Sbjct: 285 VTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEA 344
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
++D+V ++++I A +G +EA + +Y M+ + + T + VL+AC++ AL G
Sbjct: 345 FADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAG 404
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
S + S+ +G +LI MYA+CG + +A ++F M +D + WNA+++G +
Sbjct: 405 ELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARR 464
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
A ++ Q++ G++P TF+ LL CT++ +G+ + R +
Sbjct: 465 EDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS-GIKSNGHL 523
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--A 429
++++ R G + EA + + + I W +++AG H + A + ++
Sbjct: 524 ANALMNMYRRCGSIMEAQNVFEGTRAR-DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEG 582
Query: 430 LEP 432
LEP
Sbjct: 583 LEP 585
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 154/290 (53%), Gaps = 2/290 (0%)
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
R + + + V ++ CT+ L+ AK IH + EAG G ++F++ L+++Y KC ++
Sbjct: 76 RPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSD 135
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
A +VF +MP +D++SW+S+I YA GF K+A +F MQ P T + +L+AC S
Sbjct: 136 AHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCS 195
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
LE G S + + +P + +L++MY KC + A +VF + +D V +N +
Sbjct: 196 PAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTM 255
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
+ + YV+ G+FGQ+ GI P+ T++ LL T ++DEG++ + ++
Sbjct: 256 LGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKR-IHKLAVNEG 314
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
L I + + R G + A + +++ + + +V+ AL+A H
Sbjct: 315 LNSDIRVGTALATMFVRCGDVAGAKQALEAFA-DRDVVVYNALIAALAQH 363
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/610 (42%), Positives = 384/610 (62%), Gaps = 33/610 (5%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P +TFPF++KA A LG H + +K+ + D FV SL++ Y CG L A KV
Sbjct: 131 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKV 190
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F I +K+VVSW ++I+G++ +G+ ++A+ +F+++ +K ++V VL+AC ++ DL
Sbjct: 191 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDL 250
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ + Y+ E N+ +A +++D+Y KCG++E A+R+FD M EKD V+W++M+ GY
Sbjct: 251 EFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGY 310
Query: 208 A-------------------------------SNGFPKEALDMFYNMQ-RENLKPEYYTM 235
A NG P EAL +F+ +Q ++N+K T+
Sbjct: 311 AISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITL 370
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
V LSACA +GALELG W S++++N N + + LI MY+KCG + +A +VF ++
Sbjct: 371 VSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEK 430
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+D VW+A++ GL+M+G A +F ++++ ++PNG TF + C C+H GLVDE
Sbjct: 431 RDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 490
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F M + + P +HY C+VD+LGRSG L++A + I++MP+ P+ VWGALL C++H
Sbjct: 491 FYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 550
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
LAE +L+ LEP N G +VLLSNIY+ S KW++ +++R M G++K GCS +
Sbjct: 551 NLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSI 610
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEE-KQYFLA 534
E+DG++HEFL GDN+HP+SEK+Y KL E+ KLK+ G+ P HVL IEEEE K+ L
Sbjct: 611 EIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLN 670
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+ +GLI+T IR+ KNLR+CGDCH KLIS++ REIIVRD RFH F
Sbjct: 671 LHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFR 730
Query: 595 EGSCSCKDFW 604
G CSC DFW
Sbjct: 731 NGQCSCNDFW 740
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 198/405 (48%), Gaps = 48/405 (11%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDKNVVSWTAIISGYIN 108
++H+ +++ G+ D + + L + + L A KVFD+IP N +W +I Y +
Sbjct: 49 QTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYAS 108
Query: 109 EGNLEEAINMFRRLLHRGLK--PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNV 166
+ +I F ++ + P+ ++ ++ A ++ LS + +HG ++ G +V
Sbjct: 109 GPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDV 168
Query: 167 FVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE 226
FVA SL+ Y CG+++ A +VF + EKD+VSW+SMI G+ G P +AL++F M+ E
Sbjct: 169 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 228
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
++K + TMVGVLSACA + LE G S++E N N L ++DMY KCG + A
Sbjct: 229 DVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 288
Query: 287 CKVFREMKDKDQVV-------------------------------WNAVVSGLSMNGYVK 315
++F M++KD V WNA++S NG
Sbjct: 289 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPN 348
Query: 316 VAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF-----NSMSRVFSLTPMI 369
A VF +L+ + I+ N T V L C G ++ GR N + F +T +
Sbjct: 349 EALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSAL 408
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
H + + G L++A E+ S+ + + VW A++ G +H
Sbjct: 409 IH------MYSKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAMH 446
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 175/351 (49%), Gaps = 34/351 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GFV A+E + M +E ++ T VL ACA+ D + G R S I +
Sbjct: 205 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENR 264
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY-INE---------- 109
++ + + ++L++Y CG + DA ++FD + +K+ V+WT ++ GY I+E
Sbjct: 265 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 324
Query: 110 --------------------GNLEEAINMFRRL-LHRGLKPDSFSIVRVLTACTQLGDLS 148
G EA+ +F L L + +K + ++V L+AC Q+G L
Sbjct: 325 AMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALE 384
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+WIH Y+ + G N +V ++L+ +Y+KCG++EKAR VF+ + ++D+ WS+MI G A
Sbjct: 385 LGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLA 444
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE-FLSNP 267
+G EA+DMFY MQ N+KP T V AC+ G ++ ME + +
Sbjct: 445 MHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPED 504
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
++D+ + G + +A K M VW A++ ++ + +A
Sbjct: 505 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLA 555
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 159/329 (48%), Gaps = 22/329 (6%)
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA--KCGNMEKARRVFDQM 192
+ ++ C+ L L K H ++ G + + A+ L + A ++E AR+VFD++
Sbjct: 35 ISLIDRCSSLRQL---KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEI 91
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNM--QRENLKPEYYTMVGVLSACASLGALEL 250
P+ + +W+++I+ YAS P ++ F +M P YT ++ A A + +L L
Sbjct: 92 PQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSL 151
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G ++ S+ + +LI Y CG + ACKVF +K+KD V WN++++G
Sbjct: 152 GQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 211
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF--FNSMSRV-FSLTP 367
G A +F ++E ++ + T VG+L C ++ GR+ + +RV +LT
Sbjct: 212 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTL 271
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
M+D+ + G +++A L +M E + + W +L G + + + A VLN +
Sbjct: 272 A----NAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNAM 326
Query: 428 IALE--PWNSGNYVLLSNIYSASHKWNDA 454
+ WN+ L + Y + K N+A
Sbjct: 327 PKKDIVAWNA-----LISAYEQNGKPNEA 350
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 251/606 (41%), Positives = 383/606 (63%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ N+ FQ A+ Y+ M+ P +FTFP +LKAC Q+G H+ + + G
Sbjct: 90 IIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLG 149
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD--DIPDKNVVSWTAIISGYINEGNLEEAINM 118
+ D FV+ L+ LY C L A VF+ +P++ +VSWTAI+S Y G EA+ +
Sbjct: 150 FEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEI 209
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++ +KPD ++V VL A T L DL + IH V + G + SL +YAK
Sbjct: 210 FSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAK 269
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG + A+ +FD+M +++ W++MI GYA NGF K+A+D+F+ M ++++P+ ++
Sbjct: 270 CGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSA 329
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+SACA +G+LE W ++ R+++ + + + LIDM+AKCG + A VF D+D
Sbjct: 330 ISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDV 389
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
VVW+A++ G ++G + A ++ +E+ G+ PN TF+GLL C H+G+V EG FFN
Sbjct: 390 VVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNR 449
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M+ + P +HY C++DLLGR+G LD+A+E+IK MP++P VWGALL+ C+ H+ +
Sbjct: 450 MAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L ++ QL +++P N+G+YV LSN+Y+A+ W+ A++R M +KG+ K GCSWVEV
Sbjct: 509 LGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
G + F VGD SHP E+I +++ + ++LK GFV D L D+ +EE + L HSE
Sbjct: 569 GRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSE 628
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
++ +A+GLI+T +RI KNLR C +CH A KLISK+ GREI+VRD NRFH F +G C
Sbjct: 629 RITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVC 688
Query: 599 SCKDFW 604
SC D+W
Sbjct: 689 SCGDYW 694
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 196/367 (53%), Gaps = 4/367 (1%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ ++ GL F+ T L++ G + A +VFDD+P V W AII GY +
Sbjct: 41 HARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHF 100
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
++A+ M+ ++ + PDSF+ +L AC L L +++H V G +VFV L
Sbjct: 101 QDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGL 160
Query: 173 VDLYAKCGNMEKARRVFD--QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+ LYAKC + AR VF+ +PE+ IVSW++++ YA NG P EAL++F M++ ++KP
Sbjct: 161 IALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKP 220
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ +V VL+A L LE G + + + + P L +L MYAKCG++A A +F
Sbjct: 221 DCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILF 280
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+MK + ++WNA++SG + NG+ K A +F ++ ++P+ + + C G ++
Sbjct: 281 DKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLE 340
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ R +SR + ++D+ + G ++ A + ++ + +VW A++ G
Sbjct: 341 QARWMDEYVSRS-DYRDDVFISSALIDMFAKCGSVECARSVFDRT-LDRDVVVWSAMIVG 398
Query: 411 CRLHKKT 417
LH +
Sbjct: 399 YGLHGQA 405
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 143/289 (49%), Gaps = 12/289 (4%)
Query: 126 GLKPDSF--SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
G+ DSF S++ T QL + IH + G + F+ T L+ + G++
Sbjct: 17 GIHSDSFYASLIDSSTHKAQL------RQIHARLLVLGLQFSGFLITKLIHASSSYGDIT 70
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
AR+VFD +P + W+++I+GY+ N ++AL M+ MQ + P+ +T +L AC
Sbjct: 71 FARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACG 130
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR--EMKDKDQVVW 301
L L++G + + + R F ++ + LI +YAKC R+ A VF + ++ V W
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSW 190
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
A+VS + NG A +F Q+ K ++P+ V +L T +++GR S+ +
Sbjct: 191 TAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMK 250
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ L + + + + GQ+ A L M PN I+W A+++G
Sbjct: 251 M-GLETEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISG 297
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 250/604 (41%), Positives = 383/604 (63%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + A + + M+ EGF P +F +L C+ G H+ + G
Sbjct: 234 MIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTG 293
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D V T+L+ +Y+ CG + A +VFD + ++VVSWT +I GY N+E+A +F
Sbjct: 294 LVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFA 353
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++PD + + ++ AC DLS A+ IH V AG G ++ V T+LV +YAKCG
Sbjct: 354 TMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCG 413
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR+VFD M +D+VSWS+MI Y NG +EA + F+ M+R N++P+ T + +L+
Sbjct: 414 AIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLN 473
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC LGAL+LG+ + + + +S+ +G LI+M K G + +A +F M +D V
Sbjct: 474 ACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVT 533
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN ++ G S++G + A +F ++ K +PN TFVG+L C+ AG V+EGR+FF+ +
Sbjct: 534 WNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLL 593
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P +E YGCMVDLLGR+G+LDEA LI MP++PN+ +W LLA CR++ D+A
Sbjct: 594 DGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVA 653
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + + EP++ YV LS++Y+A+ W + AK+R +M +G++K +GC+W+EV+G
Sbjct: 654 ERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGK 713
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H F+V D SHP + +IY++L L T +K G++P T +VL ++ E+EK+ ++ HSEKL
Sbjct: 714 LHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKL 773
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+G+++ IRI KNLRVCGDCH A K ISK+TGREII RD +RFH F G CSC
Sbjct: 774 AIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSC 833
Query: 601 KDFW 604
D+W
Sbjct: 834 GDYW 837
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 229/428 (53%), Gaps = 2/428 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + A + M +E P+ TF VL AC+ +LG H+ ++K G
Sbjct: 133 IIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVG 192
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + T+L+++YV G + A +VFD + ++V ++ +I GY G+ E+A +F
Sbjct: 193 FVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFY 252
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G KP+ S + +L C+ L+ K +H G +V VAT+L+ +Y CG
Sbjct: 253 RMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCG 312
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E ARRVFD+M +D+VSW+ MI+GYA N ++A +F MQ E ++P+ T + +++
Sbjct: 313 SIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIIN 372
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACAS L L S + R F ++ ++ T L+ MYAKCG + A +VF M +D V
Sbjct: 373 ACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVS 432
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ NG + AF F +++ ++P+ T++ LL C H G +D G + +
Sbjct: 433 WSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAI 492
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L I ++++ + G ++ A + ++M ++ + + W ++ G LH A
Sbjct: 493 KA-DLVSHIPVGNALINMNVKHGSIERARYIFENM-VQRDVVTWNVMIGGYSLHGNAREA 550
Query: 421 EHVLNQLI 428
+ ++++
Sbjct: 551 LDLFDRML 558
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 214/437 (48%), Gaps = 47/437 (10%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ + + C D LG + I+++G + + +L+ L+ CG + +A + FD +
Sbjct: 63 TYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSV 122
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
+K VV+W AII+GY G+++EA +FR+++ ++P + + VL AC+ L K
Sbjct: 123 ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGK 182
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
H V + G + + T+LV +Y K G+M+ AR+VFD + ++D+ +++ MI GYA +G
Sbjct: 183 EFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSG 242
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
++A +FY MQ+E KP + + +L C++ AL G + + + + T
Sbjct: 243 DGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVAT 302
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
LI MY CG + A +VF +MK +D V W ++ G + N ++ AFG+F +++ GIQP
Sbjct: 303 ALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQP 362
Query: 332 NGNTFVGLLCGCTHA-----------------------------------GLVDEGRQFF 356
+ T++ ++ C + G + + RQ F
Sbjct: 363 DRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVF 422
Query: 357 NSMSR--VFSLTPMIEHY---GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
++MSR V S + MI Y GC + E L+K +EP+ + + LL C
Sbjct: 423 DAMSRRDVVSWSAMIGAYVENGCGEEAF-------ETFHLMKRNNVEPDVVTYINLLNAC 475
Query: 412 RLHKKTDLAEHVLNQLI 428
DL + Q I
Sbjct: 476 GHLGALDLGMEIYTQAI 492
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 167/339 (49%), Gaps = 47/339 (13%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
DS + V++ C L D K + ++ ++G+ N++ +L+ L++ CGNM +AR+ F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D + K +V+W+++I GYA G KEA +F M E ++P T + VL AC+S L+
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
LG + + + F+S+ +GT L+ MY K G M A +VF + +D +N ++ G +
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT-----------HA-----GLVDE-- 351
+G + AF +F ++++ G +PN +F+ +L GC+ HA GLVD+
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVR 299
Query: 352 -----------------GRQFFNSMS--RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
R+ F+ M V S T MI Y + +++A L
Sbjct: 300 VATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGY-------AENSNIEDAFGLF 352
Query: 393 KSMP---MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+M ++P+ I + ++ C LA + +Q++
Sbjct: 353 ATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVV 391
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 258/641 (40%), Positives = 399/641 (62%), Gaps = 37/641 (5%)
Query: 1 MIRGF-VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR S+D Q + F + + F P FTFP ++KA A F +G H + +K
Sbjct: 210 LIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKT 269
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAIN 117
D FV SL++ Y CG+L A VF+ I +K++VSW ++++G++ G ++A++
Sbjct: 270 SFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALD 329
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+F R+ + G+ P++ ++V V++AC + +L+ + + Y++ N+ V + +D++
Sbjct: 330 LFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFV 389
Query: 178 KCG----------NMEK---------------------ARRVFDQMPEKDIVSWSSMIQG 206
KCG NMEK AR +FD MP KDI +W+ +I G
Sbjct: 390 KCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISG 449
Query: 207 YASNGFPKEALDMFYNMQ--RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
Y +G PKEAL +F +Q + +P+ T++ LSACA LGA+++G W ++++
Sbjct: 450 YEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQ 509
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
N L T+LIDMY+K G + +A +VF + +KD VW+A+++GL+M+G + A +F +
Sbjct: 510 LNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDM 569
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
++ ++PN TF LLC C+H+GLVDEG++ F+ M RV+ + P +HY CMVD+LGR+G
Sbjct: 570 QETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGH 629
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
L+EA + I+ MP+ P+A VWGALL C +H +LAE ++L+ +EP N G YVLLSN+
Sbjct: 630 LEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNL 689
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+ + W +++R M D G++K GCS +E+DG VHEF+VGDN+HPLS IY+KLDE+
Sbjct: 690 YAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEI 749
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEE-KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRV 563
+L++ G+V T +L +EEEE K+ L HSEK+A+AFGLI + IRI KNLRV
Sbjct: 750 MARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRV 809
Query: 564 CGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
C DCH K++SK+ GR+I++RD RFH F G CSC+D+W
Sbjct: 810 CRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 179/373 (47%), Gaps = 38/373 (10%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACT 142
A KVFD IP N+ SW +I + +++ +F R+LH P+ F+ ++ A
Sbjct: 192 ARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVA 251
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSW 200
+ K +HG + G +VFV SL+ YA CG+++ A VF+ + KDIVSW
Sbjct: 252 ERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSW 311
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+SM+ G+ G+P +ALD+F M+ E + P TMV V+SACA L LG +++R
Sbjct: 312 NSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDR 371
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV--------------------- 299
NE + N + IDM+ KCG + A +F M+ +D V
Sbjct: 372 NEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDI 431
Query: 300 ----------VWNAVVSGLSMNGYVKVAFGVFG--QLEKCGIQPNGNTFVGLLCGCTHAG 347
WN ++SG +G K A +F QL K G +P+ T + L C G
Sbjct: 432 FDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLG 491
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+D G ++ + + + ++D+ +SG +++A E+ S+ + VW A+
Sbjct: 492 AMDIG-EWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIG-NKDVFVWSAM 549
Query: 408 LAGCRLHKKTDLA 420
+AG +H + + A
Sbjct: 550 IAGLAMHGRGEAA 562
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 159/364 (43%), Gaps = 24/364 (6%)
Query: 108 NEGNLEEAINMFRRLL--HRGLKPDSFSIVRV-----LTACTQLGDLSTAKWIHGYVNEA 160
+E EE IN R + H P S + V CT L K IH +
Sbjct: 109 SEKEKEEWINSIGRSIVQHSSPTPASATATNVGDRALFQQCTSFKQL---KQIHAQMLRT 165
Query: 161 GKGRNVFVATSLVDL--YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALD 218
K + + A+ L ++ ++ AR+VFDQ+P+ ++ SW+ +I+ A++ P +++
Sbjct: 166 NKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVL 225
Query: 219 MFYNMQREN-LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
+F M ++ P +T ++ A A +G + F + + +LI Y
Sbjct: 226 VFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFY 285
Query: 278 AKCGRMAQACKVFR--EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
A CG + A VF E +KD V WN++V+G GY A +F ++ G+ PN T
Sbjct: 286 ASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVT 345
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
V ++ C + GR+ + + R + + +D+ + G+++ A L +M
Sbjct: 346 MVSVMSACAKTMNLTLGRKVCDYIDR-NEMMMNLNVCNATIDMFVKCGEVEIARGLFDNM 404
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEPWNSGNYVLLSNIYSASHKWND 453
+ + + W ++ G + +A + + + + WN VL+S Y S + +
Sbjct: 405 E-KRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWN----VLISG-YEQSGRPKE 458
Query: 454 AAKI 457
A I
Sbjct: 459 ALAI 462
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/626 (42%), Positives = 388/626 (61%), Gaps = 37/626 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG + A++ Y M + G LP FTFPF+LK+CA+ F+ G + H ++K G
Sbjct: 46 MFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLG 105
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
D D +V TSL+++Y G L DA KVFD
Sbjct: 106 FDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFD 165
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+ISGY GN ++A+ +F+ ++ +KPD ++ V++AC Q G +
Sbjct: 166 EIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIEL 225
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++N+ G G N+ + +L+DLY+KCG +E A + + + KD++SW+++I GY
Sbjct: 226 GRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTH 285
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN----EFLS 265
KEAL +F M R P TM+ +L ACA LGA+++G W ++++ +
Sbjct: 286 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTN 345
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
L T+LIDMYAKCG + A +V ++ WNA++ G +M+G AF +F ++
Sbjct: 346 ASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRM 405
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
K GI+P+ TFVGLL C+H+G++D GR F SM + +++TP +EHYGCM+DLLG SG
Sbjct: 406 RKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGL 465
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
EA E+I +MPMEP+ ++W +LL C++H +L E +LI +EP N G+YVLLSNI
Sbjct: 466 FKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNI 525
Query: 445 YSASHKWNDAAKIRSMMGDKGI-QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDE 503
Y+ + KWN+ KIR+++ DKG+ +K+ GCS +E+D VVHEF++GD HP + +IY L+E
Sbjct: 526 YATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEE 585
Query: 504 LATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRV 563
+ L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRV
Sbjct: 586 MEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 645
Query: 564 CGDCHEAIKLISKITGREIIVRDNNR 589
C +CHEA KLISKI REII RD R
Sbjct: 646 CRNCHEATKLISKIYKREIIARDRTR 671
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 196/388 (50%), Gaps = 34/388 (8%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
L H L A+ VF+ IP+ N + W + G+ + A+ ++ ++ GL P+ F+
Sbjct: 18 LSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFT 77
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+L +C + + IHG+V + G +++V TSL+ +YA+ G +E A++VFD+
Sbjct: 78 FPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSS 137
Query: 194 EKDIVSWSSMIQGYASNGF-----------P--------------------KEALDMFYN 222
+D+VS++++I GYAS G+ P K+AL++F
Sbjct: 138 HRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKE 197
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M + N+KP+ TM V+SACA G++ELG S++ + F SN + LID+Y+KCG
Sbjct: 198 MMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGE 257
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ AC++ + +KD + WN ++ G + K A +F ++ + G PN T + +L
Sbjct: 258 VETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 317
Query: 343 CTHAGLVDEGR---QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP 399
C H G +D GR + + + +T ++D+ + G +D A ++ S
Sbjct: 318 CAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNR 377
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ W A++ G +H + + A + +++
Sbjct: 378 SLSTWNAMIFGFAMHGRANAAFDIFSRM 405
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/604 (42%), Positives = 386/604 (63%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++R + + F HAIE Y M+ P F+FP VLKAC+ ++G R H I + G
Sbjct: 144 IVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHG 203
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV+ L+ LY CG + A VF + D+ +VSWT+IISGY G EA+ +F
Sbjct: 204 FESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFS 263
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ ++PD ++V VL A T + DL K IHG V + G + SL LYAKCG
Sbjct: 264 EMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCG 323
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR F+Q+ ++ W++MI GY NG+ +EA+++F M+ +N++P+ T+ ++
Sbjct: 324 HVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIA 383
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA +G+LEL W ++ +EF ++ ++ T+LID YAKCG + A VF + DKD VV
Sbjct: 384 ACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVV 443
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ G ++G + + +F + + G+ PN TFVGLL C ++GLV+EG F+ M
Sbjct: 444 WSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM- 502
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R + + P +HY C+VDLLGR+G LD A+ + +MP+EP VWGALL+ C++H+ L
Sbjct: 503 RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLG 562
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E+ +L +L+P+N+G+YV LSN+Y++S W+ AK+R +M +KG+ K G S +E++G
Sbjct: 563 EYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGK 622
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+ F GD +HP S++I+ ++++L +LK AGFVP T+ VL D+ EE + L HSE+L
Sbjct: 623 LQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERL 682
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+GLI+T P +RI KNLR C +CH AIKLISK+ REI+VRD RFH F +G+CSC
Sbjct: 683 AIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSC 742
Query: 601 KDFW 604
D+W
Sbjct: 743 GDYW 746
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 194/389 (49%), Gaps = 6/389 (1%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADAL 85
F P F + + + H Q+ ++ ++ GL F+ L+N + G ++ A
Sbjct: 72 FKPDKFYASLIDDSIHKTHLNQI----YAKLLVTGLQYGGFLIAKLVNKASNIGEVSCAR 127
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
K+FD PD +V W AI+ Y G AI M+ R+ + PD FS VL AC+ L
Sbjct: 128 KLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALP 187
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
L + +HG + G +VFV LV LYAKCG + +A VF ++ ++ IVSW+S+I
Sbjct: 188 ALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIIS 247
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GYA NG P EAL +F M++ N++P++ +V VL A + LE G + +
Sbjct: 248 GYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLEC 307
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
L +L +YAKCG + A F ++++ + WNA++SG NGY + A +F ++
Sbjct: 308 EFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMK 367
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
I+P+ T + C G ++ R +S +I + ++D + G +
Sbjct: 368 SKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTS-LIDTYAKCGSV 426
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLH 414
D A + +P + + +VW A++ G LH
Sbjct: 427 DMARFVFDRIP-DKDVVVWSAMMVGYGLH 454
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/606 (41%), Positives = 384/606 (63%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ N+ FQ A+ Y++M+ P +FTFP +LKAC+ Q+G H+ + + G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD--DIPDKNVVSWTAIISGYINEGNLEEAINM 118
D D FV+ L+ LY C L A VF+ +P++ +VSWTAI+S Y G EA+ +
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++ +KPD ++V VL A T L DL + IH V + G + SL +YAK
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAK 269
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG + A+ +FD+M +++ W++MI GYA NG+ +EA+DMF+ M ++++P+ ++
Sbjct: 270 CGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSA 329
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+SACA +G+LE ++ R+++ + + + LIDM+AKCG + A VF D+D
Sbjct: 330 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV 389
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
VVW+A++ G ++G + A ++ +E+ G+ PN TF+GLL C H+G+V EG FFN
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNR 449
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M+ + P +HY C++DLLGR+G LD+A+E+IK MP++P VWGALL+ C+ H+ +
Sbjct: 450 MAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E+ QL +++P N+G+YV LSN+Y+A+ W+ A++R M +KG+ K GCSWVEV
Sbjct: 509 LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
G + F VGD SHP E+I +++ + ++LK GFV D L D+ +EE + L HSE
Sbjct: 569 GRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSE 628
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
++A+A+GLI+T +RI KNLR C +CH A KLISK+ REI+VRD NRFH F +G C
Sbjct: 629 RIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVC 688
Query: 599 SCKDFW 604
SC D+W
Sbjct: 689 SCGDYW 694
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 197/367 (53%), Gaps = 4/367 (1%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ ++ GL F+ T L++ G + A +VFDD+P + W AII GY +
Sbjct: 41 HARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHF 100
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
++A+ M+ + + PDSF+ +L AC+ L L +++H V G +VFV L
Sbjct: 101 QDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGL 160
Query: 173 VDLYAKCGNMEKARRVFD--QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+ LYAKC + AR VF+ +PE+ IVSW++++ YA NG P EAL++F M++ ++KP
Sbjct: 161 IALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 220
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
++ +V VL+A L L+ G + + + P L +L MYAKCG++A A +F
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILF 280
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+MK + ++WNA++SG + NGY + A +F ++ ++P+ + + C G ++
Sbjct: 281 DKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLE 340
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ R + + R + ++D+ + G ++ A L+ ++ + +VW A++ G
Sbjct: 341 QARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVG 398
Query: 411 CRLHKKT 417
LH +
Sbjct: 399 YGLHGRA 405
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 145/290 (50%), Gaps = 14/290 (4%)
Query: 126 GLKPDSF--SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
G+ DSF S++ T QL K IH + G + F+ T L+ + G++
Sbjct: 17 GIHSDSFYASLIDSATHKAQL------KQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 70
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
AR+VFD +P I W+++I+GY+ N ++AL M+ NMQ + P+ +T +L AC+
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR--EMKDKDQVVW 301
L L++G + + + R F ++ + LI +YAKC R+ A VF + ++ V W
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
A+VS + NG A +F Q+ K ++P+ V +L T + +GR S+ +
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 362 V-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + P + + + + GQ+ A L M PN I+W A+++G
Sbjct: 251 MGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISG 297
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/606 (41%), Positives = 383/606 (63%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ N+ FQ A+ Y++M+ P +FTFP +LKAC+ Q+G H+ + + G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD--DIPDKNVVSWTAIISGYINEGNLEEAINM 118
D D FV+ L+ LY C L A VF+ +P++ +VSWTAI+S Y G EA+ +
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F + +KPD ++V VL A T L DL + IH V + G + SL +YAK
Sbjct: 210 FSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAK 269
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG + A+ +FD+M +++ W++MI GYA NG+ +EA+DMF+ M ++++P+ ++
Sbjct: 270 CGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSA 329
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+SACA +G+LE ++ R+++ + + + LIDM+AKCG + A VF D+D
Sbjct: 330 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV 389
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
VVW+A++ G ++G + A ++ +E+ G+ PN TF+GLL C H+G+V EG FFN
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNL 449
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M+ + P +HY C++DLLGR+G LD+A+E+IK MP++P VWGALL+ C+ H+ +
Sbjct: 450 MAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E+ QL +++P N+G+YV LSN+Y+A+ W+ A++R M +KG+ K GCSWVEV
Sbjct: 509 LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
G + F VGD SHP E+I +++ + ++LK GFV D L D+ +EE + L HSE
Sbjct: 569 GRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSE 628
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
++A+A+GLI+T +RI KNLR C +CH A KLISK+ REI+VRD NRFH F +G C
Sbjct: 629 RIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVC 688
Query: 599 SCKDFW 604
SC D+W
Sbjct: 689 SCGDYW 694
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 198/367 (53%), Gaps = 4/367 (1%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ ++ GL F+ T L++ G + A +VFDD+P + W AII GY +
Sbjct: 41 HARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHF 100
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
++A+ M+ + + PDSF+ +L AC+ L L +++H V G +VFV L
Sbjct: 101 QDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGL 160
Query: 173 VDLYAKCGNMEKARRVFD--QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+ LYAKC + AR VF+ +PE+ IVSW++++ YA NG P EAL++F +M++ ++KP
Sbjct: 161 IALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKP 220
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
++ +V VL+A L L+ G + + + P L +L MYAKCG++A A +F
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILF 280
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+MK + ++WNA++SG + NGY + A +F ++ ++P+ + + C G ++
Sbjct: 281 DKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLE 340
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ R + + R + ++D+ + G ++ A L+ ++ + +VW A++ G
Sbjct: 341 QARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVG 398
Query: 411 CRLHKKT 417
LH +
Sbjct: 399 YGLHGRA 405
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 144/290 (49%), Gaps = 14/290 (4%)
Query: 126 GLKPDSF--SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
G+ DSF S++ T QL K IH + G + F+ T L+ + G++
Sbjct: 17 GIHSDSFYASLIDSATHKAQL------KQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 70
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
AR+VFD +P I W+++I+GY+ N ++AL M+ NMQ + P+ +T +L AC+
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR--EMKDKDQVVW 301
L L++G + + + R F ++ + LI +YAKC R+ A VF + ++ V W
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
A+VS + NG A +F + K ++P+ V +L T + +GR S+ +
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 362 V-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + P + + + + GQ+ A L M PN I+W A+++G
Sbjct: 251 MGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISG 297
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/638 (40%), Positives = 393/638 (61%), Gaps = 34/638 (5%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR + S D F + + P +TFPF++KA A LG H + VK+
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ D FV SL++ Y CG L A KVF I +K+VVSW ++I+G++ +G+ ++A+ +F
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+++ +K ++V VL+AC ++ +L + + Y+ E N+ +A +++D+Y KC
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKC 280
Query: 180 GNMEKARRVFD-------------------------------QMPEKDIVSWSSMIQGYA 208
G++E A+R+FD MP+KDIV+W+++I Y
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE 340
Query: 209 SNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
NG P EAL +F+ +Q ++N+K T+V LSACA +GALELG W S+++++ N
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ + LI MY+KCG + ++ +VF ++ +D VW+A++ GL+M+G A +F ++++
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
++PNG TF + C C+H GLVDE F+ M + + P +HY C+VD+LGRSG L++
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A + I++MP+ P+ VWGALL C++H +LAE +L+ LEP N G +VLLSNIY+
Sbjct: 521 AVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAK 580
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
KW + +++R M G++K GCS +E+DG++HEFL GDN+HP+SEK+Y KL E+ K
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEK 640
Query: 508 LKAAGFVPTTDHVLFDIEEEE-KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
LK+ G+ P VL IEEEE K+ L HSEKLA+ +GLI+T VIR+ KNLRVCGD
Sbjct: 641 LKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGD 700
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CH KLIS++ REIIVRD RFH F G CSC DFW
Sbjct: 701 CHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 195/399 (48%), Gaps = 37/399 (9%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDKNVVSWTAIISGYIN 108
++H +++ G D + + L + + L A KVFD+IP N +W +I Y +
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 109 EGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
+ +I F ++ P+ ++ ++ A ++ LS + +HG ++ G +VF
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
VA SL+ Y CG+++ A +VF + EKD+VSW+SMI G+ G P +AL++F M+ E+
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+K + TMVGVLSACA + LE G S++E N N L ++DMY KCG + A
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 288 KVFREMKDKDQVV-------------------------------WNAVVSGLSMNGYVKV 316
++F M++KD V WNA++S NG
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347
Query: 317 AFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A VF +L+ + ++ N T V L C G ++ GR + +S + + +
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSAL 406
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + + G L+++ E+ S+ + + VW A++ G +H
Sbjct: 407 IHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 161/328 (49%), Gaps = 21/328 (6%)
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA--KCGNMEKARRVFDQM 192
+ ++ C L L K HG++ G + + A+ L + A ++E AR+VFD++
Sbjct: 34 ISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALELG 251
P+ + +W+++I+ YAS P ++ F +M E+ P YT ++ A A + +L LG
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
++ S+ + +LI Y CG + ACKVF +K+KD V WN++++G
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF--FNSMSRV-FSLTPM 368
G A +F ++E ++ + T VG+L C ++ GRQ + +RV +LT
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
M+D+ + G +++A L +M E + + W +L G + + + A VLN +
Sbjct: 271 ----NAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 429 A--LEPWNSGNYVLLSNIYSASHKWNDA 454
+ WN+ L + Y + K N+A
Sbjct: 326 QKDIVAWNA-----LISAYEQNGKPNEA 348
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/601 (42%), Positives = 387/601 (64%), Gaps = 10/601 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
++ ++ MR P TFP +K+C+ D G ++H + G + D FV ++L++
Sbjct: 66 SLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALID 125
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-------- 125
+Y CG L++A +FD+IP +N+V+WT++I+GY+ + EA+ +F+ L
Sbjct: 126 MYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEE 185
Query: 126 -GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G DS +++ VL+AC+++ + + ++ +HG + G + + V +L+D YAKCG +
Sbjct: 186 VGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSL 245
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL-KPEYYTMVGVLSACA 243
+R+VFD M EKD+VSW+SMI YA NG +A ++F+ M + K T+ +L ACA
Sbjct: 246 SRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACA 305
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
GAL +G+ + + +++N ++ T++IDMY KCG+ A F MK+K+ W A
Sbjct: 306 HEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTA 365
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++G M+G+ + A VF Q+ G++PN TF+ +L C+HAG ++EG ++FN+MS +
Sbjct: 366 MIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEY 425
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
++ P +EHYGCMVDLLGR+G + EA+ LIKSM + + ++WG+LLA CR+HK +LAE
Sbjct: 426 NVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEIS 485
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
+L L+P N G YVLL+NIY+ + +W D ++R ++ D+G+ K G S VE+ G VH
Sbjct: 486 ARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHV 545
Query: 484 FLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALA 543
FLVGD HP EKIY L+EL+ KL+ AG+VP VL D++EEEK+ + HSEKLA+A
Sbjct: 546 FLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVA 605
Query: 544 FGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
FG++ + P I + KNLRVCGDCH IKLISKI REIIVRD RFH F +G CSC D+
Sbjct: 606 FGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDY 665
Query: 604 W 604
W
Sbjct: 666 W 666
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 187/369 (50%), Gaps = 26/369 (7%)
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
+V SW ++I+ G+ E++ F + +KP+ + + +C+ L DL++ K H
Sbjct: 46 DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
G ++FV+++L+D+Y+KCG + AR +FD++P ++IV+W+S+I GY N
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAH 165
Query: 215 EALDMFY---------NMQRENLKPEYYTMVGVLSACASLG--ALELGVWASSFMERNEF 263
EAL +F N + + M+ VLSAC+ + A+ GV + +
Sbjct: 166 EALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAI----KV 221
Query: 264 LSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ V+G TL+D YAKCG ++ + KVF +M +KD V WN++++ + NG AF VF
Sbjct: 222 GLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVF 281
Query: 322 -GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
G L+ G + N T LL C H G + G + + ++ + +I ++D+
Sbjct: 282 HGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATS-IIDMYC 340
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNY 438
+ GQ + A M E N W A++AG +H A V Q+I ++P NY
Sbjct: 341 KCGQAEMARNAFDGMK-EKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKP----NY 395
Query: 439 VLLSNIYSA 447
+ ++ +A
Sbjct: 396 ITFISVLAA 404
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/605 (43%), Positives = 376/605 (62%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+ SN ++ Y M G NFT+PFVLKAC ++G R HS +V G
Sbjct: 132 MIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCG 191
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D +V SLL +Y G + A VFD + ++++ SW +ISGY + A +F
Sbjct: 192 LESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFD 251
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR-NVFVATSLVDLYAKC 179
+ GL D +++ +L+AC L + K IHGY G N F SL+++Y C
Sbjct: 252 LMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNC 311
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
M ARR+F+++ KD VSW+SMI GYA NG E+L +F M + P+ T + VL
Sbjct: 312 NCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVL 371
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC + AL G+ S++ + F +N ++GT L+DMY+KCG +A + +VF EM DK V
Sbjct: 372 GACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLV 431
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W+A+V+G ++G + A + ++ + P+ F +L C+HAGLV EG++ F M
Sbjct: 432 SWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKM 491
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ +++ P + HY CMVDLLGR+G LDEA+ +I++M ++P + +W ALL RLHK L
Sbjct: 492 EKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKL 551
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE ++ + P +Y+ LSNIY+A +W+D ++R+M+ KG++K GCS++E+D
Sbjct: 552 AEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDN 611
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+VH FLVGD SH +E IY+KL+EL +LK AG+ P T V +D+EEE K+ L HSE+
Sbjct: 612 MVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSER 671
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AF LI T P VIRI KNLRVCGDCH KLIS++TGREII+RD +RFH FI+G CS
Sbjct: 672 LAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCS 731
Query: 600 CKDFW 604
C D+W
Sbjct: 732 CGDYW 736
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 203/397 (51%), Gaps = 6/397 (1%)
Query: 36 VLKACAREHDFQLGVRSHS-LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
+L++ F+ G + H+ +I + L+ + ++ T L Y CG ++ A +FD I K
Sbjct: 65 LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
N W +I GY + G +++ ++R +L G + D+F+ VL AC L + + +H
Sbjct: 125 NSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVH 184
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
V G +++V SL+ +YAK G+M AR VFD+M E+D+ SW++MI GYA N
Sbjct: 185 SEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSG 244
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS-NPVLGTTL 273
A +F M + L + T++G+LSACA L A++ G + RN + N +L
Sbjct: 245 TAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSL 304
Query: 274 IDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
I+MY C M A ++F ++ KD V WN+++ G + NG + +F ++ G P+
Sbjct: 305 IEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQ 364
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
TF+ +L C + G + + + F ++ +VD+ + G L + +
Sbjct: 365 VTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVG--TALVDMYSKCGSLACSRRVF 422
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
MP + + + W A++AG LH + A +L+ + A
Sbjct: 423 DEMP-DKSLVSWSAMVAGYGLHGRGREAISILDGMKA 458
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 271/610 (44%), Positives = 379/610 (62%), Gaps = 13/610 (2%)
Query: 7 SNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEF 66
S D Q A+ ++SMR P TFP +K+C+ +D G + H G D F
Sbjct: 64 SGDSLQ-ALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIF 122
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL--- 123
V ++L+++Y CGYL DA K+FD+IP++NVVSWT++ISGY+ EA+ +F+ L
Sbjct: 123 VASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVD 182
Query: 124 --------HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
G+ DS + V++AC ++ S + +HG + G + V +L+D
Sbjct: 183 ETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDA 242
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLKPEYYT 234
YAKCG + +R+VFD M E D+ SW+S+I YA NG EA +F +M +R ++ T
Sbjct: 243 YAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVT 302
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+ VL ACA GAL++G + + E N V+GT+++DMY KCGR+ A K F +K
Sbjct: 303 LSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK 362
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
K+ W +V+G M+G+ K A VF ++ +CGI+PN TFV +L C+HAGL+ EG
Sbjct: 363 RKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWH 422
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+FN M F + P IEHY CMVDLLGR+G L EA+ LI+ M ++P+ IVWG+LL CR+H
Sbjct: 423 WFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIH 482
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K +L E +L L+P N G YVLLSNIY+ + +W+D ++R +M + G+ K G S
Sbjct: 483 KNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSI 542
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
VE G VH FLVGD HP EKIY LDEL KL+ G++P VL+D++ EEK L
Sbjct: 543 VEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLR 602
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFG++ + P VI+I KNLR+CGDCH AIKLISKI REI++RD+ RFH F
Sbjct: 603 VHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHFK 662
Query: 595 EGSCSCKDFW 604
+G CSC D+W
Sbjct: 663 DGLCSCGDYW 672
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 190/381 (49%), Gaps = 21/381 (5%)
Query: 82 ADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
A+ +F DK +V SW +II+ + G+ +A+ F + L P+ + + +
Sbjct: 36 ANLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKS 95
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
C+ L DL K IH G G ++FVA++L+D+Y+KCG + AR++FD++PE+++VSW
Sbjct: 96 CSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSW 155
Query: 201 SSMIQGYASNGFPKEALDMF----------YNMQRENLKPEYYTMVG-VLSACASLGALE 249
+SMI GY N +EA+ +F Y+ ++G V+SACA +
Sbjct: 156 TSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKS 215
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
+ + F +G TL+D YAKCG ++ + KVF M++ D WN++++ +
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYA 275
Query: 310 MNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
NG AF +F + K G ++ N T +L C H+G + G+ + + ++ L
Sbjct: 276 QNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKM-ELEDN 334
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ +VD+ + G+++ A + + N W ++AG +H A V ++I
Sbjct: 335 LVVGTSIVDMYCKCGRVEMARKAFDRLK-RKNVKSWTVMVAGYGMHGHGKEAMKVFYEMI 393
Query: 429 --ALEPWNSGNYVLLSNIYSA 447
++P NY+ ++ +A
Sbjct: 394 RCGIKP----NYITFVSVLAA 410
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 264/642 (41%), Positives = 394/642 (61%), Gaps = 38/642 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLP-TNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MIRG+ +D + AI Y SM +G P NFTFPF+L +CAR + G HS I+K
Sbjct: 81 MIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKH 140
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G + D FV+ +L++LY G L A +FD+ +++VS+ +I GY E A+ +F
Sbjct: 141 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLF 200
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG--YVNEAGKGRNVFVATSLVDLYA 177
+ + G+ PD F+ V + + C+ L + + K IH Y N N+ + +++VD+YA
Sbjct: 201 GEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYA 260
Query: 178 KCG--------------------------------NMEKARRVFDQMPEKDIVSWSSMIQ 205
KCG + AR++F+ M E+D++SW++MI
Sbjct: 261 KCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMIS 320
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV-WASSFMERNEFL 264
GY+ G EAL++F M+ +KP+ T+V VLSACA LGA +LG ++E F
Sbjct: 321 GYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFN 380
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKD--KDQVVWNAVVSGLSMNGYVKVAFGVFG 322
N +L ++DMYAKCG + A ++FR + K V+N++++GL+ +G + A VF
Sbjct: 381 QNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFR 440
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
+L G++P+ TFVG+LC C H+GL++EG++ F SM + + P +EHYGCMVDLLGR
Sbjct: 441 ELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRY 500
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLS 442
G L+EA++L++ MP E N+++W ALL+ CR H + E +L+ +E + YVLLS
Sbjct: 501 GCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLS 560
Query: 443 NIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLD 502
NI + +++W +A ++R +M D GI+K G S++E+ G +H F+ D SHP ++I L
Sbjct: 561 NILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLK 620
Query: 503 ELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
++A +LK+AG+VP T V+FDI+EEEK+ ++ HSEKLALAFGL+ +P D IRI KNLR
Sbjct: 621 DMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLR 680
Query: 563 VCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+C DCH+A KL+S+I GREI VRD RFH F GSCSC DFW
Sbjct: 681 ICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 216/450 (48%), Gaps = 48/450 (10%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY---LA 82
FL N + +L++C F+ G++ H+ + GL F + L++ + G L
Sbjct: 5 FLLENPSSLCLLESCK---SFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLD 61
Query: 83 DALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL-KPDSFSIVRVLTAC 141
+ +F I N+ W +I GY N EAI ++ ++ +G+ P++F+ +L +C
Sbjct: 62 HSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSC 121
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+L L +H ++ + G ++FV +L+ LY+ GN+ AR +FD+ +D+VS++
Sbjct: 122 ARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYN 181
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG--VWASSFME 259
+MI+GYA P+ AL +F MQ + P+ +T V + S C+ L +G + A +
Sbjct: 182 TMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKN 241
Query: 260 RNEFLSNPVLGTTLIDMYAK--------------------------------CGRMAQAC 287
SN +L + ++DMYAK CG + A
Sbjct: 242 LRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVAR 301
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
K+F M ++D + W A++SG S G A +F ++E GI+P+ T V +L C G
Sbjct: 302 KLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLG 361
Query: 348 LVDEGRQFFNSM--SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME-PNAIVW 404
D G++ ++ + VF+ ++ ++D+ + G +D A E+ + + V+
Sbjct: 362 AFDLGKRLYHQYIENGVFNQNTILT--AAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVF 419
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIA--LEP 432
+++AG H + A V +LI+ L+P
Sbjct: 420 NSMIAGLAQHGLGETAITVFRELISTGLKP 449
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 251/604 (41%), Positives = 380/604 (62%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF + A F+N M G P TF +L AC+ + G + I++AG
Sbjct: 384 MIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D+ V+T+LL++Y CG L DA +VF+ I +NVV+W A+I+ Y+ + A+ F+
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQ 503
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
LL G+KP+S + +L C L KW+H + +AG ++ V+ +LV ++ CG
Sbjct: 504 ALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCG 563
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+ +F+ MP++D+VSW+++I G+ +G + A D F MQ +KP+ T G+L+
Sbjct: 564 DLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLN 623
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACAS AL G + + F + ++GT LI MY KCG + A +VF ++ K+
Sbjct: 624 ACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYS 683
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++++G + +G K A +F Q+++ G++P+ TFVG L C HAGL++EG F SM
Sbjct: 684 WTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM- 742
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ F++ P +EHYGCMVDL GR+G L+EA E I M +EP++ VWGALL C++H +LA
Sbjct: 743 KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELA 802
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + + L+P ++G +V+LSNIY+A+ W + AK+R +M D+G+ K G SW+EVDG
Sbjct: 803 EKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGK 862
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F D +HP +E+I+++L+ L +++ G+VP T +VL D+E+ EK+ L HSE+L
Sbjct: 863 VHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERL 922
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+ +GL+ T P I I+KNLRVCGDCH A K ISKIT R+II RD+NRFH F +G CSC
Sbjct: 923 AITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSC 982
Query: 601 KDFW 604
DFW
Sbjct: 983 GDFW 986
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 232/427 (54%), Gaps = 2/427 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + F+ A + M EG P F +L+AC + G + H+ + + G
Sbjct: 283 MITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVG 342
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + +V T++L++Y CG + DAL+VFD + +NVVSWTA+I+G+ G ++EA F
Sbjct: 343 WDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFN 402
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ G++P+ + + +L AC+ L + I ++ EAG G + V T+L+ +YAKCG
Sbjct: 403 KMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCG 462
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A RVF+++ ++++V+W++MI Y + AL F + +E +KP T +L+
Sbjct: 463 SLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C S +LELG W + + S+ + L+ M+ CG + A +F +M +D V
Sbjct: 523 VCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVS 582
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++G +G +VAF F +++ GI+P+ TF GLL C + EGR+ ++
Sbjct: 583 WNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALIT 642
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++ G ++ + + G +++AH++ +P + N W +++AG H + A
Sbjct: 643 EAAFDCDVLVGTG-LISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAGYAQHGRGKEA 700
Query: 421 EHVLNQL 427
+ Q+
Sbjct: 701 LELFYQM 707
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 226/420 (53%), Gaps = 2/420 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+V + ++ A + + M + P TF +L ACA + G ++LI+KAG
Sbjct: 182 LLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAG 241
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FV T+L+N+++ CG + DA KVFD++P +++V+WT++I+G G ++A N+F+
Sbjct: 242 WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQ 301
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G++PD + V +L AC L K +H + E G ++V T+++ +Y KCG
Sbjct: 302 RMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCG 361
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ME A VFD + +++VSW++MI G+A +G EA F M ++P T + +L
Sbjct: 362 SMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILG 421
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+S AL+ G + + S+ + T L+ MYAKCG + A +VF ++ ++ V
Sbjct: 422 ACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVA 481
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+++ + A F L K GI+PN +TF +L C + ++ G+ + + +
Sbjct: 482 WNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGK-WVHFLI 540
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
L + +V + G L A L MP + + + W ++AG H K +A
Sbjct: 541 MKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 232/427 (54%), Gaps = 21/427 (4%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ +L+ C + + G R ++ I K+G+ D F++ +L+N+Y CG A ++FDD+
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
+K+V SW ++ GY+ G EEA + +++ +KPD + V +L AC ++ +
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
++ + +AG ++FV T+L++++ KCG++ A +VFD +P +D+V+W+SMI G A +G
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
K+A ++F M+ E ++P+ V +L AC ALE G + M+ + + +GT
Sbjct: 292 RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
++ MY KCG M A +VF +K ++ V W A+++G + +G + AF F ++ + GI+P
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQF--------FNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
N TF+ +L C+ + G+Q + S RV + ++ + + G
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRT---------ALLSMYAKCG 462
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYVLL 441
L +AH + + + + N + W A++ H++ D A L+ ++P NS + +
Sbjct: 463 SLKDAHRVFEKISKQ-NVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSI 520
Query: 442 SNIYSAS 448
N+ +S
Sbjct: 521 LNVCKSS 527
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 109/222 (49%), Gaps = 2/222 (0%)
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
KD ++++ + G EA+ + + +++ T +L C L G
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
+ ++++ + + TLI+MYAKCG A ++F +M++KD WN ++ G +G
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
+ AF + Q+ + ++P+ TFV +L C A VD+GR+ +N + + T +
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA- 251
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
++++ + G + +A ++ ++P + + W +++ G H +
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGLARHGR 292
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 251/604 (41%), Positives = 380/604 (62%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF + A F+N M G P TF +L AC+ + G + I++AG
Sbjct: 384 MIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D+ V+T+LL++Y CG L DA +VF+ I +NVV+W A+I+ Y+ + A+ F+
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQ 503
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
LL G+KP+S + +L C L KW+H + +AG ++ V+ +LV ++ CG
Sbjct: 504 ALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCG 563
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+ +F+ MP++D+VSW+++I G+ +G + A D F MQ +KP+ T G+L+
Sbjct: 564 DLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLN 623
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACAS AL G + + F + ++GT LI MY KCG + A +VF ++ K+
Sbjct: 624 ACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYS 683
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++++G + +G K A +F Q+++ G++P+ TFVG L C HAGL++EG F SM
Sbjct: 684 WTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM- 742
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ F++ P +EHYGCMVDL GR+G L+EA E I M +EP++ VWGALL C++H +LA
Sbjct: 743 KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELA 802
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + + L+P ++G +V+LSNIY+A+ W + AK+R +M D+G+ K G SW+EVDG
Sbjct: 803 EKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGK 862
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F D +HP +E+I+++L+ L +++ G+VP T +VL D+E+ EK+ L HSE+L
Sbjct: 863 VHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERL 922
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+ +GL+ T P I I+KNLRVCGDCH A K ISKIT R+II RD+NRFH F +G CSC
Sbjct: 923 AITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSC 982
Query: 601 KDFW 604
DFW
Sbjct: 983 GDFW 986
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 231/427 (54%), Gaps = 2/427 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + F+ A + M EG P F +L+AC + G + H+ + + G
Sbjct: 283 MITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVG 342
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + +V T++L++Y CG + DAL+VFD + +NVVSWTA+I+G+ G ++EA F
Sbjct: 343 WDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFN 402
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ G++P+ + + +L AC+ L + I ++ EAG G + V T+L+ +YAKCG
Sbjct: 403 KMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCG 462
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A RVF+++ ++++V+W++MI Y + AL F + +E +KP T +L+
Sbjct: 463 SLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C S +LELG W + + S+ + L+ M+ CG + A +F +M +D V
Sbjct: 523 VCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVS 582
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++G +G +VAF F +++ GI+P+ TF GLL C + EGR+ ++
Sbjct: 583 WNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALIT 642
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++ G ++ + + G +++AH++ +P + N W +++ G H + A
Sbjct: 643 EAAFDCDVLVGTG-LISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITGYAQHGRGKEA 700
Query: 421 EHVLNQL 427
+ Q+
Sbjct: 701 LELFYQM 707
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 226/420 (53%), Gaps = 2/420 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+V + ++ A + + M + P TF +L ACA + G ++LI+KAG
Sbjct: 182 LLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAG 241
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FV T+L+N+++ CG + DA KVFD++P +++V+WT++I+G G ++A N+F+
Sbjct: 242 WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQ 301
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G++PD + V +L AC L K +H + E G ++V T+++ +Y KCG
Sbjct: 302 RMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCG 361
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ME A VFD + +++VSW++MI G+A +G EA F M ++P T + +L
Sbjct: 362 SMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILG 421
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+S AL+ G + + S+ + T L+ MYAKCG + A +VF ++ ++ V
Sbjct: 422 ACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVA 481
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+++ + A F L K GI+PN +TF +L C + ++ G+ + + +
Sbjct: 482 WNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGK-WVHFLI 540
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
L + +V + G L A L MP + + + W ++AG H K +A
Sbjct: 541 MKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 231/427 (54%), Gaps = 21/427 (4%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ +L+ C + + G R ++ I K+G+ D F+ +L+N+Y CG A ++FDD+
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
+K+V SW ++ GY+ G EEA + +++ +KPD + V +L AC ++ +
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
++ + +AG ++FV T+L++++ KCG++ A +VFD +P +D+V+W+SMI G A +G
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
K+A ++F M+ E ++P+ V +L AC ALE G + M+ + + +GT
Sbjct: 292 RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
++ MY KCG M A +VF +K ++ V W A+++G + +G + AF F ++ + GI+P
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQF--------FNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
N TF+ +L C+ + G+Q + S RV + ++ + + G
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRT---------ALLSMYAKCG 462
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYVLL 441
L +AH + + + + N + W A++ H++ D A L+ ++P NS + +
Sbjct: 463 SLKDAHRVFEKISKQ-NVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSI 520
Query: 442 SNIYSAS 448
N+ +S
Sbjct: 521 LNVCKSS 527
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 109/222 (49%), Gaps = 2/222 (0%)
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
KD ++++ + G EA+ + + +++ T +L C L G
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
+ ++++ + + TLI+MYAKCG A ++F +M++KD WN ++ G +G
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
+ AF + Q+ + ++P+ TFV +L C A VD+GR+ +N + + T +
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA- 251
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
++++ + G + +A ++ ++P + + W +++ G H +
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGLARHGR 292
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 270/604 (44%), Positives = 375/604 (62%), Gaps = 41/604 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+G + N+ AI FY M + P FT+P + KAC+ Q G + H +VK G
Sbjct: 104 VIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHG 162
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D +K++ +++Y G L DA K+F + +VV W +I GY+ G LE A +F
Sbjct: 163 IGSDVHIKSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLF- 220
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
Q+ + W NV +++ AK G
Sbjct: 221 ---------------------AQMPVKNIGSW------------NV-----MINGLAKGG 242
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ AR++FD+M E+D +SWSSM+ GY S G KEAL++F MQRE +P + + VL+
Sbjct: 243 NLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLA 302
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+++GA++ G W ++++RN + VLGT L+DMYAKCGR+ +VF EMK+++
Sbjct: 303 ACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFT 362
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ GL+++G + A +F +L++ ++PNG T VG+L C HAG VD+G + F +M
Sbjct: 363 WNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMR 422
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P +EHYGCMVDLLGRSG EA +LI SMPM+PNA VWGALL CR+H DLA
Sbjct: 423 EFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLA 482
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V L+ LEP NSG YVLLSNIY+ +++D +KIR +M D+GI+ + G S V+++G
Sbjct: 483 ERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGT 542
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEF +GD SHP ++IY KL + +L+ AG P T VLFDI+EEEK+ + HSEKL
Sbjct: 543 VHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKL 602
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI T P I I KNLRVC DCH A KLIS+I REIIVRD R+H F G+CSC
Sbjct: 603 AIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSC 662
Query: 601 KDFW 604
KDFW
Sbjct: 663 KDFW 666
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKC--GNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+HG V +G ++ +V+ +L+ YA N + A +VF +P ++ W+ +I+G N
Sbjct: 52 LHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLEN 111
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
+A+ FY + +P +T + AC+ A++ G + ++ S+ +
Sbjct: 112 NKLFKAI-YFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIK 170
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
+ I MYA GR+ A K+F + D V WN ++ G G ++ A G+F Q+
Sbjct: 171 SAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMP----V 225
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
N ++ ++ G G + + R+ F+ MS ++ + MVD +G+ EA E
Sbjct: 226 KNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEIS-----WSSMVDGYISAGRYKEALE 280
Query: 391 LIKSMPME---PNAIVWGALLAGC 411
+ + M E P + ++LA C
Sbjct: 281 IFQQMQREETRPGRFILSSVLAAC 304
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/600 (43%), Positives = 380/600 (63%), Gaps = 9/600 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ ++SMR P TFP +K+C+ D G ++H + G + D FV ++L++
Sbjct: 136 ALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVD 195
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL--HRGLKPDS 131
+Y CG L DA +FD+I +N+VSWT++I+GY+ + A+ +F+ L G + D
Sbjct: 196 MYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDG 255
Query: 132 ------FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
++V VL+AC+++ + S + +HG++ + G ++ V +L+D YAKCG + +
Sbjct: 256 EVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVS 315
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACAS 244
RRVFD M E+D++SW+S+I YA NG E++++F+ M ++ + T+ VL ACA
Sbjct: 316 RRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAH 375
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
G+ LG + + SN +GT++IDMY KCG++ A K F M++K+ W+A+
Sbjct: 376 SGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAM 435
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
V+G M+G+ K A VF ++ G++PN TFV +L C+HAGL++EG +F +MS F
Sbjct: 436 VAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFD 495
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ P +EHYGCMVDLLGR+G L EA +LIK M + P+ +VWGALL CR+HK DL E
Sbjct: 496 VEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISA 555
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+L L+P N G YVLLSNIY+ + +W D ++R +M + G+ K G S V++ G VH F
Sbjct: 556 RKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVF 615
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
LVGD HP EKIY L++L+ KL+ G+VP VL D+ EEK+ L HSEKLA+AF
Sbjct: 616 LVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAF 675
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
G++ T P I I KNLRVCGDCH AIK ISKI REI+VRD+ RFH F +G CSC D+W
Sbjct: 676 GIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 183/379 (48%), Gaps = 30/379 (7%)
Query: 87 VFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+F+ DK NV SW ++I+ G+ EA+ F + LKP+ + + +C+ L
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
DL + + H G ++FV+++LVD+Y+KCG + AR +FD++ ++IVSW+SMI
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226
Query: 206 GYASNGFPKEALDMFYNMQRENLKPE--------YYTMVGVLSACASLGALELGVWASSF 257
GY N AL +F E E MV VLSAC+ + + F
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ + F + + TL+D YAKCG + + +VF M ++D + WN++++ + NG +
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346
Query: 318 FGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM------SRVFSLTPMIE 370
+F ++ K G I N T +L C H+G G+ + + S VF T +I
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSII- 405
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ--LI 428
D+ + G+++ A + M E N W A++AG +H A V + +
Sbjct: 406 ------DMYCKCGKVEMARKAFDRM-REKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMA 458
Query: 429 ALEPWNSGNYVLLSNIYSA 447
++P NY+ ++ +A
Sbjct: 459 GVKP----NYITFVSVLAA 473
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/621 (43%), Positives = 377/621 (60%), Gaps = 66/621 (10%)
Query: 50 VRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADAL---KVFDDIPDKNVVSWTAIISGY 106
++ H+LI+K LD + FV LL C D L VFD+IP + W +I Y
Sbjct: 20 IQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAY 79
Query: 107 INEGNLEEAINMFRRLLHRGLKP-DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+N N +E++++F ++ H+ P DS+S+ V+ AC +L D + +H V + G G +
Sbjct: 80 LNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSD 139
Query: 166 VFVATSLVDLYAKCGNMEKARRV-------------------------------FDQMPE 194
+FV T+L+++YAK G++E AR + FD+MPE
Sbjct: 140 LFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPE 199
Query: 195 KDIVSWSSMIQGYASNG--------FPK-----------------------EALDMFYNM 223
+D+VSW++MI G+AS G F + EAL +F+ M
Sbjct: 200 RDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEM 259
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
Q N+ P+ TMV VLSAC +GAL +G +ERN + LGT+L+DMYAKCG +
Sbjct: 260 QLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDI 319
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
+ +VF M ++D W+A++ GL+ +G+ ++A F ++ I+PN TF+G+L C
Sbjct: 320 DNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSAC 379
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
+H GLVDEG +F SMS+V+ ++P IEHYGC+VD+LGR+G+L EA ELIKSMP P+AIV
Sbjct: 380 SHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIV 439
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGD 463
W ALL CR++K ++AE L+ LEP GNYVLLSNIYS + +W+ +R MM +
Sbjct: 440 WRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKN 499
Query: 464 KGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
IQK+ G S +EVD VHEF+ GD SHP S+KI L E+ +LKA G+ P T VL D
Sbjct: 500 INIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQD 559
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
+E+EK+ LA HSEKLA+AFGL++TAP IRI KNLRVC DCH AIKLIS+ R II
Sbjct: 560 FDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRII 619
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
VRD NRFH F+ GSCSCKD+W
Sbjct: 620 VRDRNRFHHFVNGSCSCKDYW 640
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 189/383 (49%), Gaps = 67/383 (17%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MIR ++++ Q ++ + MR++ +P + ++ V++AC R D G + H+ ++K
Sbjct: 75 MIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKI 134
Query: 60 GLDCDEFVKTSLLNLYVHCG----------------------YLADALKV---------F 88
GL D FV+T+L+ +Y G LA+ ++V F
Sbjct: 135 GLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLF 194
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL--------------------- 127
D +P++++VSW +I G+ + G++ A +F R R L
Sbjct: 195 DRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALR 254
Query: 128 ----------KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
PD ++V VL+AC +G L K IH + ++ + TSLVD+YA
Sbjct: 255 LFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYA 314
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCG+++ + RVF+ M +D+ +WS+MI G A++GF + ALD F M E++KP T +G
Sbjct: 315 KCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIG 374
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK- 294
VLSAC+ +G ++ G W + +P + ++D+ + GR+ +A ++ + M
Sbjct: 375 VLSACSHIGLVDEG-WTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPF 433
Query: 295 DKDQVVWNAVVSGLSMNGYVKVA 317
D +VW A++ + V++A
Sbjct: 434 APDAIVWRALLGACRIYKNVEIA 456
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/600 (43%), Positives = 377/600 (62%), Gaps = 9/600 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ ++S+R G +PT +FP +K+C+ D G SH G + D FV ++L++
Sbjct: 1126 ALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALID 1185
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-------- 125
+Y CG L DA +FD+IP +NVVSWT++I+GY+ + A+ +F+ L
Sbjct: 1186 MYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGN 1245
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
+ DS +V VL+AC+++ + +HG+V + G ++ V +L+D YAKCG +
Sbjct: 1246 NVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVS 1305
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACAS 244
++VFD M EKD +SW+SMI YA +G EAL++F+ M R ++ T+ VL ACA
Sbjct: 1306 KKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAH 1365
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
GAL G + + + N +GT++IDMY KCGR+ A K F MK+K+ W A+
Sbjct: 1366 AGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAM 1425
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
V+G M+G K A +F ++ + G++PN TFV +L C+HAGLV+EG +FN+M +
Sbjct: 1426 VAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYD 1485
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ P IEHYGCMVDL GR+G L+EA+ LIK M M+P+ +VWG+LL CR+HK DL E
Sbjct: 1486 IEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAA 1545
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+L L+P N G YVLLSN+Y+ + +W D ++R +M ++ + K G S VE+ G VH F
Sbjct: 1546 QKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVF 1605
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
LVGD HP E IY L++L +L+ G+VP VL D++EEEK+ L HSEKLA+AF
Sbjct: 1606 LVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAF 1665
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
G++ +AP I I KNLRVCGDCH IKLISK+ R+ +VRD+ RFH F +G CSC D+W
Sbjct: 1666 GVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 213/392 (54%), Gaps = 34/392 (8%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
F+L+ C +F+ + H+ I+++GL D+ + L++LY G +A A+ +F I +
Sbjct: 32 FLLQNC---KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
+W II G E+A+ +++ ++ +G+ D F+ V+ ACT + K +H
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCG-------------------------------NME 183
G + + G +VFV +L+D Y KCG +++
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
+ARR+FD++P K++VSW++MI GY N P+EAL++F MQ EN+ P YTMV ++ AC
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+G L LG + +N LGT LIDMY+KCG + A +VF M K WN+
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++ L ++G + A +F ++E+ ++P+ TF+G+LC C H V EG +F M++ +
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY 388
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
+ P+ EHY CM +L RS LDEA + K +
Sbjct: 389 GIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 175/325 (53%), Gaps = 32/325 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR N + A+ Y +M +G FTFPFV+KAC LG H ++K G
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 61 LDCDEFVKTSLLNLYVHCGY-------------------------------LADALKVFD 89
D FV+ +L++ Y CG+ L +A ++FD
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP KNVVSWTA+I+GYI EEA+ +F+R+ + P+ +++V ++ ACT++G L+
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ IH Y + V++ T+L+D+Y+KCG+++ A VF+ MP K + +W+SMI
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN-PV 268
+G +EAL++F M+R N+KP+ T +GVL AC + ++ G + M ++ ++ P
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 269 LGTTLIDMYAKCGRMAQACKVFREM 293
+ ++YA+ + +A K +E+
Sbjct: 396 HYECMTELYARSNNLDEAFKSTKEV 420
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 190/372 (51%), Gaps = 25/372 (6%)
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+ NV SW ++I+ G+ EA+ F L GL P S + +C+ L DL +
Sbjct: 1102 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSG 1161
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ H G ++FV+++L+D+Y+KCG ++ AR +FD++P +++VSW+SMI GY N
Sbjct: 1162 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 1221
Query: 211 GFPKEALDMFYNMQRE--------NLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
AL +F + E N+ + MV VLSAC+ + + F+ +
Sbjct: 1222 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG 1281
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF- 321
F + +G TL+D YAKCG+ + KVF M++KD + WN++++ + +G A VF
Sbjct: 1282 FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFH 1341
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC----MVD 377
G + G++ N T +L C HAG + G+ + + ++ +E+ C ++D
Sbjct: 1342 GMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM-----DLEYNVCVGTSIID 1396
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNS 435
+ + G+++ A + M E N W A++AG +H + A + +++ ++P
Sbjct: 1397 MYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP--- 1452
Query: 436 GNYVLLSNIYSA 447
NY+ ++ +A
Sbjct: 1453 -NYITFVSVLAA 1463
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 143/319 (44%), Gaps = 44/319 (13%)
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ IH + +G + + L+ LY+ G + A +F Q+ +W+ +I+ N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G ++AL ++ NM + + + +T V+ AC + +++LG + + F + +
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL---------------------- 308
LID Y KCG A KVF +M+ ++ V W V+SGL
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 309 ----SMNGYVK-----VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+NGY++ A +F +++ I PN T V L+ CT G++ GR +
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD-- 281
Query: 360 SRVFSLTPMIE---HYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
+++ IE + G ++D+ + G + +A E+ ++MP + + W +++ +H
Sbjct: 282 ---YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVH- 336
Query: 416 KTDLAEHVLNQLIALEPWN 434
L + LN +E N
Sbjct: 337 --GLGQEALNLFSEMERVN 353
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 67/133 (50%)
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
+ + + ++ SW+S+I A G EAL F ++++ L P + + +C++L L
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 1158
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
G + F ++ + + LIDMY+KCG++ A +F E+ ++ V W ++++G
Sbjct: 1159 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 1218
Query: 309 SMNGYVKVAFGVF 321
N A +F
Sbjct: 1219 VQNEQADNALLLF 1231
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 269/604 (44%), Positives = 374/604 (61%), Gaps = 41/604 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+G + N+ AI FY M + P FT+P + KAC+ Q G + H +VK G
Sbjct: 104 VIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHG 162
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D +K++ + +Y G L DA K+F + +VV W +I GY+ G LE A +F
Sbjct: 163 IGSDVHIKSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLF- 220
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
Q+ + W NV +++ AK G
Sbjct: 221 ---------------------AQMPVKNIGSW------------NV-----MINGLAKGG 242
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ AR++FD+M E+D +SWSSM+ GY S G KEAL++F MQRE +P + + VL+
Sbjct: 243 NLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLA 302
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+++GA++ G W ++++RN + VLGT L+DMYAKCGR+ +VF EMK+++
Sbjct: 303 ACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFT 362
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ GL+++G + A +F +L++ ++PNG T VG+L C HAG VD+G + F +M
Sbjct: 363 WNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMR 422
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P +EHYGCMVDLLGRSG EA +LI SMPM+PNA VWGALL CR+H DLA
Sbjct: 423 EFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLA 482
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V L+ LEP NSG YVLLSNIY+ +++D +KIR +M ++GI+ + G S V+++G
Sbjct: 483 ERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGT 542
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEF +GD SHP ++IY KL + +L+ AG P T VLFDI+EEEK+ + HSEKL
Sbjct: 543 VHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKL 602
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI T P I I KNLRVC DCH A KLIS+I REIIVRD R+H F G+CSC
Sbjct: 603 AIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSC 662
Query: 601 KDFW 604
KDFW
Sbjct: 663 KDFW 666
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/600 (43%), Positives = 377/600 (62%), Gaps = 9/600 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ ++S+R G +PT +FP +K+C+ D G SH G + D FV ++L++
Sbjct: 1999 ALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALID 2058
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-------- 125
+Y CG L DA +FD+IP +NVVSWT++I+GY+ + A+ +F+ L
Sbjct: 2059 MYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGN 2118
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
+ DS +V VL+AC+++ + +HG+V + G ++ V +L+D YAKCG +
Sbjct: 2119 NVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVS 2178
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACAS 244
++VFD M EKD +SW+SMI YA +G EAL++F+ M R ++ T+ VL ACA
Sbjct: 2179 KKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAH 2238
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
GAL G + + + N +GT++IDMY KCGR+ A K F MK+K+ W A+
Sbjct: 2239 AGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAM 2298
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
V+G M+G K A +F ++ + G++PN TFV +L C+HAGLV+EG +FN+M +
Sbjct: 2299 VAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYD 2358
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ P IEHYGCMVDL GR+G L+EA+ LIK M M+P+ +VWG+LL CR+HK DL E
Sbjct: 2359 IEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAA 2418
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+L L+P N G YVLLSN+Y+ + +W D ++R +M ++ + K G S VE+ G VH F
Sbjct: 2419 QKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVF 2478
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
LVGD HP E IY L++L +L+ G+VP VL D++EEEK+ L HSEKLA+AF
Sbjct: 2479 LVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAF 2538
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
G++ +AP I I KNLRVCGDCH IKLISK+ R+ +VRD+ RFH F +G CSC D+W
Sbjct: 2539 GVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 213/392 (54%), Gaps = 34/392 (8%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
F+L+ C +F+ + H+ I+++GL D+ + L++LY G +A A+ +F I +
Sbjct: 32 FLLQNCK---NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
+W II G E+A+ +++ ++ +G+ D F+ V+ ACT + K +H
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCG-------------------------------NME 183
G + + G +VFV +L+D Y KCG +++
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
+ARR+FD++P K++VSW++MI GY N P+EAL++F MQ EN+ P YTMV ++ AC
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+G L LG + +N LGT LIDMY+KCG + A +VF M K WN+
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++ L ++G + A +F ++E+ ++P+ TF+G+LC C H V EG +F M++ +
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY 388
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
+ P+ EHY CM +L RS LDEA + K +
Sbjct: 389 GIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 175/325 (53%), Gaps = 32/325 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR N + A+ Y +M +G FTFPFV+KAC LG H ++K G
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 61 LDCDEFVKTSLLNLYVHCGY-------------------------------LADALKVFD 89
D FV+ +L++ Y CG+ L +A ++FD
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP KNVVSWTA+I+GYI EEA+ +F+R+ + P+ +++V ++ ACT++G L+
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ IH Y + V++ T+L+D+Y+KCG+++ A VF+ MP K + +W+SMI
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN-PV 268
+G +EAL++F M+R N+KP+ T +GVL AC + ++ G + M ++ ++ P
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 269 LGTTLIDMYAKCGRMAQACKVFREM 293
+ ++YA+ + +A K +E+
Sbjct: 396 HYECMTELYARSNNLDEAFKSTKEV 420
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 190/372 (51%), Gaps = 25/372 (6%)
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+ NV SW ++I+ G+ EA+ F L GL P S + +C+ L DL +
Sbjct: 1975 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSG 2034
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ H G ++FV+++L+D+Y+KCG ++ AR +FD++P +++VSW+SMI GY N
Sbjct: 2035 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 2094
Query: 211 GFPKEALDMFYNMQRE--------NLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
AL +F + E N+ + MV VLSAC+ + + F+ +
Sbjct: 2095 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG 2154
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF- 321
F + +G TL+D YAKCG+ + KVF M++KD + WN++++ + +G A VF
Sbjct: 2155 FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFH 2214
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC----MVD 377
G + G++ N T +L C HAG + G+ + + ++ +E+ C ++D
Sbjct: 2215 GMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM-----DLEYNVCVGTSIID 2269
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNS 435
+ + G+++ A + M E N W A++AG +H + A + +++ ++P
Sbjct: 2270 MYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP--- 2325
Query: 436 GNYVLLSNIYSA 447
NY+ ++ +A
Sbjct: 2326 -NYITFVSVLAA 2336
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 143/319 (44%), Gaps = 44/319 (13%)
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ IH + +G + + L+ LY+ G + A +F Q+ +W+ +I+ N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G ++AL ++ NM + + + +T V+ AC + +++LG + + F + +
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL---------------------- 308
LID Y KCG A KVF +M+ ++ V W V+SGL
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 309 ----SMNGYVK-----VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+NGY++ A +F +++ I PN T V L+ CT G++ GR +
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD-- 281
Query: 360 SRVFSLTPMIE---HYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
+++ IE + G ++D+ + G + +A E+ ++MP + + W +++ +H
Sbjct: 282 ---YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVH- 336
Query: 416 KTDLAEHVLNQLIALEPWN 434
L + LN +E N
Sbjct: 337 --GLGQEALNLFSEMERVN 353
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
+ + + ++ SW+S+I A G EAL F ++++ L P + + +C++L L
Sbjct: 1972 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 2031
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
G + F ++ + + LIDMY+KCG++ A +F E+ ++ V W ++++G
Sbjct: 2032 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 2091
Query: 309 SMNGYVKVAFGVFGQL--EKCGIQPNGN------TFVGLLCGCT 344
N A +F E+ ++ N V +L C+
Sbjct: 2092 VQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 2135
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 256/604 (42%), Positives = 373/604 (61%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF + + A F+N M G P TF +L AC+R + G + H I+KAG
Sbjct: 378 MIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAG 437
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D+ V+T+LL++Y CG L DA VF+ I +NVV+W A+I+ Y+ + A+ F+
Sbjct: 438 YITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQ 497
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
LL G+KPDS + +L C L KW+ + AG ++ + +LV ++ CG
Sbjct: 498 ALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCG 557
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +F+ MPE+D+VSW+++I G+ +G + A D F MQ +KP+ T G+L+
Sbjct: 558 DLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLN 617
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACAS AL G + + + V+GT LI MY KCG + A VF + K+
Sbjct: 618 ACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYS 677
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++++G + +G K A +F Q+++ G++P+ TFVG L C HAGL+ EG F SM
Sbjct: 678 WTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM- 736
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ F++ P +EHYGCMVDL GR+G L EA E I M ++P++ +WGALL C++H +LA
Sbjct: 737 KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELA 796
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V + + L+P + G YV+LSNIY+A+ W + K+R +M D+G+ K G SW+EVDG
Sbjct: 797 EKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGR 856
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F D +HP E+I+++L L ++K G+VP T +VL D+E+ EK++ L HSE+L
Sbjct: 857 VHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERL 916
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+GL+ T P I I+KNLRVCGDCH A KLISKIT R+II RD+NRFH F +G CSC
Sbjct: 917 AIAYGLLKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSC 976
Query: 601 KDFW 604
DFW
Sbjct: 977 GDFW 980
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 234/427 (54%), Gaps = 2/427 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + F+ A + M EG P F +LKAC + G R H+ + + G
Sbjct: 277 MITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVG 336
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + +V T+LL++Y CG + DAL+VF+ + +NVVSWTA+I+G+ G +EEA F
Sbjct: 337 LDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFN 396
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ G++P+ + + +L AC++ L + IH + +AG + V T+L+ +YAKCG
Sbjct: 397 KMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCG 456
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR VF+++ ++++V+W++MI Y + A+ F + +E +KP+ T +L+
Sbjct: 457 SLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILN 516
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C S ALELG W S + R F S+ + L+ M+ CG + A +F +M ++D V
Sbjct: 517 VCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVS 576
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++G +G + AF F +++ G++P+ TF GLL C + EGR+ ++
Sbjct: 577 WNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALIT 636
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++ G ++ + + G +D+AH + ++P + N W +++ G H + A
Sbjct: 637 EAALDCDVVVGTG-LISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQHGRGKEA 694
Query: 421 EHVLNQL 427
+ Q+
Sbjct: 695 LELFCQM 701
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 222/420 (52%), Gaps = 2/420 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+V + ++ A + M +G P +TF ++L ACA + G SLI+ AG
Sbjct: 176 LLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAG 235
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FV T+L+N+++ CG + DALKVF+++P +++++WT++I+G ++A N+F+
Sbjct: 236 WDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQ 295
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++PD + V +L AC L K +H + E G ++V T+L+ +Y KCG
Sbjct: 296 VMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCG 355
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ME A VF+ + +++VSW++MI G+A +G +EA F M ++P T + +L
Sbjct: 356 SMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILG 415
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+ AL+ G + + ++++ + T L+ MYAKCG + A VF + ++ V
Sbjct: 416 ACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVA 475
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+++ + A F L K GI+P+ +TF +L C ++ G+ + +
Sbjct: 476 WNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLII 535
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R + +V + G L A L MP E + + W ++AG H + A
Sbjct: 536 RA-GFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHGENQFA 593
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 231/435 (53%), Gaps = 10/435 (2%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ +L+ C + + G R H+ I + + D F+ L+++Y CG A ++FD++
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
PDK+V SW ++ GY+ EEA + +++ G+KPD ++ V +L AC ++
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGG 225
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+ + AG ++FV T+L++++ KCG ++ A +VF+ +P +D+++W+SMI G A +
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHR 285
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
K+A ++F M+ E ++P+ V +L AC ALE G + M+ + +GT
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGT 345
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
L+ MY KCG M A +VF +K ++ V W A+++G + +G ++ AF F ++ + GI+P
Sbjct: 346 ALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
N TF+ +L C+ + +GRQ + + + +T ++ + + G L +A +
Sbjct: 406 NRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITD-DRVRTALLSMYAKCGSLMDARNV 464
Query: 392 IKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYVLLSNIYSASH 449
+ + + N + W A++ H+K D A L+ ++P +S + + N+ +
Sbjct: 465 FERISKQ-NVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKP-DSSTFTSILNVCKSPD 522
Query: 450 -----KWNDAAKIRS 459
KW + IR+
Sbjct: 523 ALELGKWVQSLIIRA 537
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/569 (44%), Positives = 360/569 (63%), Gaps = 1/569 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+ACA D LG H VKA + +LL++Y CG L A+ VFD + +
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
VV+WT++I+ Y EG +EAI +F + G+ PD F+I VL AC G L K +H
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
Y+ E N+FV +L+D+YAKCG+ME A VF +MP KDI+SW++MI GY+ N P E
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL +F +M E +KP+ T+ +L ACASL +L+ G + RN F S+ + L+D
Sbjct: 184 ALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MY KCG A +F + KD + W +++G M+G+ A F ++ + GI+P+ +
Sbjct: 243 MYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
F+ +L C+H+GL+DEG +FFN M ++ P +EHY C+VDLL RSG+L A++ IKSM
Sbjct: 303 FISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSM 362
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
P+EP+A +WGALL+GCR+H LAE V + LEP N+G YVLL+N Y+ + KW +
Sbjct: 363 PIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVK 422
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
K+R +G +G++K GCSW+EV VH FL G++SHP ++KI L L +K+K G+ P
Sbjct: 423 KLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFP 482
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
T + L + + +K+ L HSEKLA+AFG++ P IR++KNLRVCGDCHE K IS
Sbjct: 483 KTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFIS 542
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K GREI++RD+NRFH F +G C C+ FW
Sbjct: 543 KTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 171/320 (53%), Gaps = 5/320 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + AI ++ M EG P FT VL ACA + G H+ I +
Sbjct: 70 LIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIREND 129
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV +L+++Y CG + DA VF ++P K+++SW +I GY EA+++F
Sbjct: 130 MQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFG 189
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ +KPD ++ +L AC L L K +HG++ G + VA +LVD+Y KCG
Sbjct: 190 DMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCG 248
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
AR +FD +P KD+++W+ MI GY +GF A+ F M++ ++P+ + + +L
Sbjct: 249 VPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILY 308
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G L+ G W + ++E P L ++D+ A+ G++A A K + M + D
Sbjct: 309 ACSHSGLLDEG-WRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPD 367
Query: 298 QVVWNAVVSGLSMNGYVKVA 317
+W A++SG ++ VK+A
Sbjct: 368 ATIWGALLSGCRIHHDVKLA 387
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 161/327 (49%), Gaps = 26/327 (7%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+V +L AC GD+S + +HG +A +L+D+YAKCG ++ A VFD M
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
+ +V+W+S+I YA G EA+ +F+ M RE + P+ +T+ VL ACA G+LE G
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+++ N+ SN + L+DMYAKCG M A VF EM KD + WN ++ G S N
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ---------FFNSMSRVFS 364
A +FG + ++P+G T +L C +D G++ FF+ +
Sbjct: 181 PNEALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
L M + C V +L R L+ M + I W ++AG +H + A
Sbjct: 240 LVDM--YVKCGVPVLAR---------LLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTF 288
Query: 425 NQL--IALEPWNSGNYVLLSNIYSASH 449
N++ +EP +S +Y+ SH
Sbjct: 289 NEMRQAGIEP---DEVSFISILYACSH 312
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 258/605 (42%), Positives = 368/605 (60%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I V + A+ + M+N+ P T +L ACA +LG H VKA
Sbjct: 401 IIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD 460
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D D T+L+++Y CG+ AL F+ + +++V+W ++I+GY G+ AI+MF
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFY 520
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L + PD+ ++V V+ AC L DL IHG + + G + V +L+D+YAKCG
Sbjct: 521 KLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCG 580
Query: 181 NMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A +F++ KD V+W+ +I Y NG KEA+ F+ M+ EN P T V VL
Sbjct: 581 SLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 640
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A A L A G+ + + + FLSN ++G +LIDMYAKCG++ + K+F EM KD V
Sbjct: 641 PAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTV 700
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG +++G+ A +F +++ +Q + +FV +L C HAGLV+EGR+ F+SM
Sbjct: 701 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSM 760
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
S + + P +EHY CMVDLLGR+G DE IK MP+EP+A VWGALL CR+H L
Sbjct: 761 SDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKL 820
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E L+ L+ LEP N ++V+LS+IY+ S +W DA K RS M D G++K GCSWVE+
Sbjct: 821 GEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKN 880
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F VGD SHP E ++ + L K++ G+VP VL ++EEE+K+ FL HSE+
Sbjct: 881 KVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSER 940
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+ F L+ T P I+I KNLRVC DCH K ISKIT R IIVRD RFH F +G CS
Sbjct: 941 LAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICS 1000
Query: 600 CKDFW 604
C D+W
Sbjct: 1001 CNDYW 1005
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 196/353 (55%), Gaps = 2/353 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR + + + A+E Y M +G P +TF FVLKAC + Q GV H I + G
Sbjct: 100 MIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRG 159
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D F+ L+++Y G L A +VFD +P ++VV+W A+I+G + EA++ FR
Sbjct: 160 LERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFR 219
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++P S S++ + +L ++ + IHGYV + + V+ L+DLY+KCG
Sbjct: 220 SMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCG 277
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ ARRVFDQM ++D VSW +M+ GYA NG E L++F M+ N++ + V
Sbjct: 278 DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFL 337
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A LE G + S+ ++ T L+ MYAKCG +A ++F ++ +D V
Sbjct: 338 AAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVA 397
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
W+A+++ L GY + A +F +++ ++PN T + +L C L+ G+
Sbjct: 398 WSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGK 450
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 204/411 (49%), Gaps = 5/411 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G ++ A++F+ SM+ G P++ + + + + +L H + +
Sbjct: 201 MIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR- 259
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V L++LY CG + A +VFD + D++ VSW +++GY + G E + +F
Sbjct: 260 -DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFD 318
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ ++ + S V A + DL K IHG + ++ VAT L+ +YAKCG
Sbjct: 319 KMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCG 378
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
EKA+++F + +D+V+WS++I G+P+EAL +F MQ + +KP T++ +L
Sbjct: 379 ETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILP 438
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA L L+LG F + + S+ GT L+ MYAKCG A F M +D V
Sbjct: 439 ACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVT 498
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++++G + G A +F +L I P+ T VG++ C +D+G +
Sbjct: 499 WNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV 558
Query: 361 RV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++ F +++ ++D+ + G L A L + + W ++A
Sbjct: 559 KLGFESDCHVKN--ALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 199/389 (51%), Gaps = 21/389 (5%)
Query: 29 TNFT-FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
TN+ +P +L +C + ++ H+ I+ +G + T L+NLY A V
Sbjct: 30 TNYLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSV 85
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD P+ + + W ++I Y EA+ M+ ++ +GL+PD ++ VL ACT +L
Sbjct: 86 FDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNL 145
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
W HG ++ G R+VF+ LVD+Y+K G++++AR VFD+MP++D+V+W++MI G
Sbjct: 146 QEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGL 205
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+ + P EA+D F +MQ ++P +++ + L +EL ++ R +F S
Sbjct: 206 SQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS-- 263
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ LID+Y+KCG + A +VF +M D+D V W +++G + NG +F +++
Sbjct: 264 AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLG 323
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM------SRVFSLTPMIEHYGCMVDLLGR 381
++ N + V +++G++ S + TP++ Y +
Sbjct: 324 NVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMY-------AK 376
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G+ ++A +L + + + W A++A
Sbjct: 377 CGETEKAKQLFWGLQGR-DLVAWSAIIAA 404
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/635 (39%), Positives = 384/635 (60%), Gaps = 31/635 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ D + A+ + M G P T V+ ACA+ D +LG + S I + G
Sbjct: 202 LINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELG 261
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ + +L+++Y+ CG + A ++FD+ +KN+V + I+S Y++ + + +
Sbjct: 262 MELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILD 321
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L +G +PD +++ + AC QLGDLS K H YV G ++ +++D+Y KCG
Sbjct: 322 EMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCG 381
Query: 181 -------------------------------NMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ME A R+FD+M E+D+VSW++MI
Sbjct: 382 KREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQ 441
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+EA+++F MQ + + + TMVG+ SAC LGAL+L W +++E+N+ + L
Sbjct: 442 VSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQL 501
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
GT L+DM+++CG + A VF+ M+ +D W A + ++M G + A +F ++ + +
Sbjct: 502 GTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKV 561
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+P+ FV LL C+H G VD+GRQ F SM + + P I HYGCMVDLLGR+G L+EA
Sbjct: 562 KPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAV 621
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+LI+SMP+EPN +VWG+LLA CR HK +LA + +L L P G +VLLSNIY+++
Sbjct: 622 DLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAG 681
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
KW D A++R M +KG+QK+ G S +EV G++HEF GD SH + I L+E+ +L
Sbjct: 682 KWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLS 741
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
AG+VP T +VL D++E+EK++ L+ HSEKLA+A+GLITT IR+ KNLR+C DCH
Sbjct: 742 EAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHS 801
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KL+SK+ REI VRDNNR+H F EG CSC+D+W
Sbjct: 802 FAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 209/359 (58%), Gaps = 4/359 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ S AI Y M G +P +TFPF+L AC++ GV+ H ++K G
Sbjct: 101 LIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMG 160
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV SL++ Y CG + K+FD + ++NVVSWT++I+GY +EA+++F
Sbjct: 161 LEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFF 220
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++P+ ++V V++AC +L DL K + Y++E G + + +LVD+Y KCG
Sbjct: 221 QMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCG 280
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR++FD+ K++V +++++ Y + + + L + M ++ +P+ TM+ ++
Sbjct: 281 DICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIA 340
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LG L +G + +++ RN + +IDMY KCG+ ACKVF M +K V
Sbjct: 341 ACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVT 400
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN++++GL +G +++A+ +F ++ + + + NT +G L + +E + F M
Sbjct: 401 WNSLIAGLVRDGDMELAWRIFDEMLERDL-VSWNTMIGAL---VQVSMFEEAIELFREM 455
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 205/397 (51%), Gaps = 21/397 (5%)
Query: 53 HSLIVKAGLDCDEFVKT--SLLNLYVHCGYLAD---ALKVFDDIPDKNVVS---WTAIIS 104
H ++K GL C + L+ V G L A F D D N+ S + +I
Sbjct: 45 HCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGD-DDGNMASLFMYNCLIR 103
Query: 105 GYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR 164
GY + G ++AI ++ ++L G+ PD ++ +L+AC+++ LS +HG V + G
Sbjct: 104 GYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEG 163
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
++FV+ SL+ YA+CG ++ R++FD M E+++VSW+S+I GY+ KEA+ +F+ M
Sbjct: 164 DIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMG 223
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
++P TMV V+SACA L LELG S++ + ++ L+DMY KCG +
Sbjct: 224 EAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDIC 283
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A ++F E +K+ V++N ++S + + + ++ + G +P+ T + + C
Sbjct: 284 AARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACA 343
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHY----GCMVDLLGRSGQLDEAHELIKSMPMEPN 400
G + G+ S + L +E + ++D+ + G+ + A ++ + MP
Sbjct: 344 QLGDLSVGKS-----SHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMP-NKT 397
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEPWNS 435
+ W +L+AG +LA + ++++ L WN+
Sbjct: 398 VVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNT 434
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/608 (41%), Positives = 379/608 (62%), Gaps = 4/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI F C + AI+ + M G++P FT+ VL AC LG + HS +++ G
Sbjct: 202 MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG 261
Query: 61 LDCDEFVKTSLLNLYVHC---GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE-EAI 116
L D V SL+++Y C G + D+ KVF+ +P+ NV+SWTAII+ Y+ G + EAI
Sbjct: 262 LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAI 321
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F +++ ++P+ FS VL AC L D T + ++ Y + G V SL+ +Y
Sbjct: 322 ELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMY 381
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ G ME AR+ FD + EK++VS+++++ GYA N +EA +F + + +T
Sbjct: 382 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 441
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
+LS AS+GA+ G + + + SN + LI MY++CG + A +VF EM+D+
Sbjct: 442 SLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 501
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ + W ++++G + +G+ A +F ++ + G +PN T+V +L C+H G++ EG++ F
Sbjct: 502 NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHF 561
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
NSM + + P +EHY CMVDLLGRSG L EA E I SMP+ +A+VW LL CR+H
Sbjct: 562 NSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGN 621
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
T+L H ++ EP + Y+LLSN+++++ +W D KIR M ++ + K GCSW+E
Sbjct: 622 TELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIE 681
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
V+ VH F VG+ SHP + +IY +LD+LA+K+K G++P TD VL DIEEE+K+ FL H
Sbjct: 682 VENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQH 741
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEK+A+AFGLI+T+ IRI KNLRVCGDCH AIK IS TGREI+VRD+NRFH G
Sbjct: 742 SEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNG 801
Query: 597 SCSCKDFW 604
CSC D+W
Sbjct: 802 VCSCNDYW 809
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 236/457 (51%), Gaps = 18/457 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ F +N AI + M GF P + F V++AC+ + +G + +VK G
Sbjct: 99 MVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTG 158
Query: 61 -LDCDEFVKTSLLNLYVH-CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
L+ D V L++++V G L A KVFD +P++N+V+WT +I+ + G +AI++
Sbjct: 159 YLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDL 218
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F + G PD F+ VL+ACT+LG L+ K +H V G +V V SLVD+YAK
Sbjct: 219 FLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAK 278
Query: 179 C---GNMEKARRVFDQMPEKDIVSWSSMIQGYASNG-FPKEALDMFYNMQRENLKPEYYT 234
C G+++ +R+VF+QMPE +++SW+++I Y +G KEA+++F M +++P +++
Sbjct: 279 CAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFS 338
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
VL AC +L G S+ + S +G +LI MYA+ GRM A K F +
Sbjct: 339 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 398
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+K+ V +NA+V G + N + AF +F ++ GI + TF LL G G + +G Q
Sbjct: 399 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 458
Query: 355 FFNSMSRVFSLTPMIEHYGC----MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ L + C ++ + R G ++ A ++ M + N I W +++ G
Sbjct: 459 IHGRL-----LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITG 512
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
H A + +++ LE N + + SA
Sbjct: 513 FAKHGFATRALEMFHKM--LETGTKPNEITYVAVLSA 547
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 224/428 (52%), Gaps = 17/428 (3%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
HA + M + P T+ +LK+C R +FQLG H ++++GL+ D V +
Sbjct: 7 LHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT 66
Query: 71 LLNLYVHCGYLADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
L++LY CG A +F+ + +K ++VSW+A++S + N +AI F +L G P
Sbjct: 67 LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP 126
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAK-CGNMEKARR 187
+ + V+ AC+ + I+G+V + G +V V L+D++ K G++ A +
Sbjct: 127 NEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYK 186
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
VFD+MPE+++V+W+ MI +A G ++A+D+F +M+ P+ +T VLSAC LG
Sbjct: 187 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 246
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKC---GRMAQACKVFREMKDKDQVVWNAV 304
L LG S + R + +G +L+DMYAKC G + + KVF +M + + + W A+
Sbjct: 247 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 306
Query: 305 VSGLSMNGYV-KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
++ +G K A +F ++ I+PN +F +L C + G Q ++ +
Sbjct: 307 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS-----Y 361
Query: 364 SLTPMIEHYGC----MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
++ I C ++ + RSG++++A + + E N + + A++ G + K++
Sbjct: 362 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIVDGYAKNLKSEE 420
Query: 420 AEHVLNQL 427
A + N++
Sbjct: 421 AFLLFNEI 428
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 156/312 (50%), Gaps = 12/312 (3%)
Query: 107 INEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNV 166
++ G L A + + + PD + +L +C + + K +H + ++G +
Sbjct: 2 LDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDS 61
Query: 167 FVATSLVDLYAKCGNMEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
V +L+ LY+KCG+ E AR +F+ M K D+VSWS+M+ +A+N +A+ F +M
Sbjct: 62 VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE 121
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV-LGTTLIDMYAK-CGRM 283
P Y V+ AC++ +G F+ + +L V +G LIDM+ K G +
Sbjct: 122 LGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDL 181
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
A KVF +M +++ V W +++ + G + A +F +E G P+ T+ +L C
Sbjct: 182 GSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 241
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEH-YGC-MVDLLGR---SGQLDEAHELIKSMPME 398
T GL+ G+Q SRV L ++ GC +VD+ + G +D++ ++ + MP E
Sbjct: 242 TELGLLALGKQLH---SRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-E 297
Query: 399 PNAIVWGALLAG 410
N + W A++
Sbjct: 298 HNVMSWTAIITA 309
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/638 (40%), Positives = 382/638 (59%), Gaps = 44/638 (6%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
++ I+ + M NEG P +F FP V KAC+ ++++G + ++ G + + VK S
Sbjct: 92 YEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGS 151
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
+L++++ CG + A + F++I K+V W ++SGY ++G ++A+N+FR+++ G+KP+
Sbjct: 152 ILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPN 211
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAKCGNMEKARR-- 187
S +I ++ACT L L + IHGY + + ++ V SLVD YAKC ++E ARR
Sbjct: 212 SITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF 271
Query: 188 -----------------------------------------VFDQMPEKDIVSWSSMIQG 206
VF ++ +D+V W+S+I
Sbjct: 272 GMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISA 331
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
A +G ALD+ M N++ TMV L AC+ L AL G F+ R +
Sbjct: 332 CAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTC 391
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
+ +LIDMY +CG + ++ ++F M +D V WN ++S M+G+ A +F Q
Sbjct: 392 NFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRT 451
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLD 386
G++PN TF LL C+H+GL++EG ++F M +++ P +E Y CMVDLL R+GQ +
Sbjct: 452 MGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFN 511
Query: 387 EAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYS 446
E E I+ MP EPNA VWG+LL CR+H DLAE+ L LEP +SGNYVL++NIYS
Sbjct: 512 ETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYS 571
Query: 447 ASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELAT 506
A+ +W DAAKIR +M ++G+ K GCSW+EV +H F+VGD SHPL E+I +K++ L
Sbjct: 572 AAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYF 631
Query: 507 KLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
+K G+VP T+ VL D++E+EK++ L HSEK+ALAFGLI+T +RI KNLRVCGD
Sbjct: 632 DIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGD 691
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CH A K ISK+ R+II+RDN RFH F++G CSC D+W
Sbjct: 692 CHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 226/461 (49%), Gaps = 52/461 (11%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +L+ C + ++ +LG + H+ +V G+D EF+ + LL +Y G + DA ++FD +
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
++NV SWTAI+ Y G+ EE I +F +++ G++PD F +V AC++L + K
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
++ Y+ G N V S++D++ KCG M+ ARR F+++ KD+ W+ M+ GY S G
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF-MERNEFLSNPVLGT 271
K+AL++F M E +KP T+ +SAC +L L G + ++ E S+ ++G
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252
Query: 272 TLIDMYAKC-------------------------------------------GRMAQACK 288
+L+D YAKC RM AC
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF E+ +D VVWN+++S + +G A + ++ ++ N T V L C+
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
+ +G++ + R L ++D+ GR G + ++ + MP + + + W ++
Sbjct: 373 LRQGKEIHQFIIRC-GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMI 430
Query: 409 AGCRLHKKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSA 447
+ +H A ++ Q + L+P N++ +N+ SA
Sbjct: 431 SVYGMHGFGMDAVNLFQQFRTMGLKP----NHITFTNLLSA 467
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/608 (41%), Positives = 379/608 (62%), Gaps = 4/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI F C + AI+ + M G++P FT+ VL AC LG + HS +++ G
Sbjct: 220 MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG 279
Query: 61 LDCDEFVKTSLLNLYVHC---GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE-EAI 116
L D V SL+++Y C G + D+ KVF+ +P+ NV+SWTAII+ Y+ G + EAI
Sbjct: 280 LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAI 339
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F +++ ++P+ FS VL AC L D T + ++ Y + G V SL+ +Y
Sbjct: 340 ELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMY 399
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ G ME AR+ FD + EK++VS+++++ GYA N +EA +F + + +T
Sbjct: 400 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 459
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
+LS AS+GA+ G + + + SN + LI MY++CG + A +VF EM+D+
Sbjct: 460 SLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 519
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ + W ++++G + +G+ A +F ++ + G +PN T+V +L C+H G++ EG++ F
Sbjct: 520 NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHF 579
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
NSM + + P +EHY CMVDLLGRSG L EA E I SMP+ +A+VW LL CR+H
Sbjct: 580 NSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGN 639
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
T+L H ++ EP + Y+LLSN+++++ +W D KIR M ++ + K GCSW+E
Sbjct: 640 TELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIE 699
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
V+ VH F VG+ SHP + +IY +LD+LA+K+K G++P TD VL DIEEE+K+ FL H
Sbjct: 700 VENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQH 759
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEK+A+AFGLI+T+ IRI KNLRVCGDCH AIK IS TGREI+VRD+NRFH G
Sbjct: 760 SEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNG 819
Query: 597 SCSCKDFW 604
CSC D+W
Sbjct: 820 VCSCNDYW 827
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 236/457 (51%), Gaps = 18/457 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ F +N AI + M GF P + F V++AC+ + +G + +VK G
Sbjct: 117 MVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTG 176
Query: 61 -LDCDEFVKTSLLNLYVH-CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
L+ D V L++++V G L A KVFD +P++N+V+WT +I+ + G +AI++
Sbjct: 177 YLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDL 236
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F + G PD F+ VL+ACT+LG L+ K +H V G +V V SLVD+YAK
Sbjct: 237 FLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAK 296
Query: 179 C---GNMEKARRVFDQMPEKDIVSWSSMIQGYASNG-FPKEALDMFYNMQRENLKPEYYT 234
C G+++ +R+VF+QMPE +++SW+++I Y +G KEA+++F M +++P +++
Sbjct: 297 CAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFS 356
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
VL AC +L G S+ + S +G +LI MYA+ GRM A K F +
Sbjct: 357 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 416
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+K+ V +NA+V G + N + AF +F ++ GI + TF LL G G + +G Q
Sbjct: 417 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 476
Query: 355 FFNSMSRVFSLTPMIEHYGC----MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ L + C ++ + R G ++ A ++ M + N I W +++ G
Sbjct: 477 IHGRL-----LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITG 530
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
H A + +++ LE N + + SA
Sbjct: 531 FAKHGFATRALEMFHKM--LETGTKPNEITYVAVLSA 565
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 224/428 (52%), Gaps = 17/428 (3%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
HA + M + P T+ +LK+C R +FQLG H ++++GL+ D V +
Sbjct: 25 LHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT 84
Query: 71 LLNLYVHCGYLADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
L++LY CG A +F+ + +K ++VSW+A++S + N +AI F +L G P
Sbjct: 85 LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP 144
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAK-CGNMEKARR 187
+ + V+ AC+ + I+G+V + G +V V L+D++ K G++ A +
Sbjct: 145 NEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYK 204
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
VFD+MPE+++V+W+ MI +A G ++A+D+F +M+ P+ +T VLSAC LG
Sbjct: 205 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 264
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKC---GRMAQACKVFREMKDKDQVVWNAV 304
L LG S + R + +G +L+DMYAKC G + + KVF +M + + + W A+
Sbjct: 265 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 324
Query: 305 VSGLSMNGYV-KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
++ +G K A +F ++ I+PN +F +L C + G Q ++ +
Sbjct: 325 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS-----Y 379
Query: 364 SLTPMIEHYGC----MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
++ I C ++ + RSG++++A + + E N + + A++ G + K++
Sbjct: 380 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIVDGYAKNLKSEE 438
Query: 420 AEHVLNQL 427
A + N++
Sbjct: 439 AFLLFNEI 446
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 156/312 (50%), Gaps = 12/312 (3%)
Query: 107 INEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNV 166
++ G L A + + + PD + +L +C + + K +H + ++G +
Sbjct: 20 LDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDS 79
Query: 167 FVATSLVDLYAKCGNMEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
V +L+ LY+KCG+ E AR +F+ M K D+VSWS+M+ +A+N +A+ F +M
Sbjct: 80 VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE 139
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV-LGTTLIDMYAK-CGRM 283
P Y V+ AC++ +G F+ + +L V +G LIDM+ K G +
Sbjct: 140 LGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDL 199
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
A KVF +M +++ V W +++ + G + A +F +E G P+ T+ +L C
Sbjct: 200 GSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 259
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEH-YGC-MVDLLGR---SGQLDEAHELIKSMPME 398
T GL+ G+Q SRV L ++ GC +VD+ + G +D++ ++ + MP E
Sbjct: 260 TELGLLALGKQLH---SRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-E 315
Query: 399 PNAIVWGALLAG 410
N + W A++
Sbjct: 316 HNVMSWTAIITA 327
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/605 (42%), Positives = 367/605 (60%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I V + A+ + M+N+ P T +L ACA +LG H VKA
Sbjct: 401 IIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD 460
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D D T+L+++Y CG+ AL F+ + +++V+W ++I+GY G+ AI+MF
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFY 520
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L + PD+ ++V V+ AC L DL IHG + + G + V +L+D+YAKCG
Sbjct: 521 KLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCG 580
Query: 181 NMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A +F++ KD V+W+ +I Y NG KEA+ F+ M+ EN P T V VL
Sbjct: 581 SLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 640
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A A L A G+ + + + FLSN ++G +LIDMYAKCG++ + K+F EM KD V
Sbjct: 641 PAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTV 700
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG +++G+ A +F +++ +Q + +FV +L C H GLV+EGR+ F+SM
Sbjct: 701 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSM 760
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
S + + P +EHY CMVDLLGR+G DE IK MP+EP+A VWGALL CR+H L
Sbjct: 761 SDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKL 820
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E L+ L+ LEP N ++V+LS+IY+ S +W DA K RS M D G++K GCSWVE+
Sbjct: 821 GEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKN 880
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F VGD SHP E ++ + L K++ G+VP VL ++EEE+K+ FL HSE+
Sbjct: 881 KVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSER 940
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+ F L+ T P I+I KNLRVC DCH K ISKIT R IIVRD RFH F +G CS
Sbjct: 941 LAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICS 1000
Query: 600 CKDFW 604
C D+W
Sbjct: 1001 CNDYW 1005
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 196/353 (55%), Gaps = 2/353 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR + + + A+E Y M +G P +TF FVLKAC + Q GV H I + G
Sbjct: 100 MIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRG 159
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D F+ L+++Y G L A +VFD +P ++VV+W A+I+G + EA++ FR
Sbjct: 160 LERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFR 219
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++P S S++ + +L ++ + IHGYV + + V+ L+DLY+KCG
Sbjct: 220 SMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCG 277
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ ARRVFDQM ++D VSW +M+ GYA NG E L++F M+ N++ + V
Sbjct: 278 DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFL 337
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A LE G + S+ ++ T L+ MYAKCG +A ++F ++ +D V
Sbjct: 338 AAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVA 397
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
W+A+++ L GY + A +F +++ ++PN T + +L C L+ G+
Sbjct: 398 WSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGK 450
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 204/411 (49%), Gaps = 5/411 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G ++ A++F+ SM+ G P++ + + + + +L H + +
Sbjct: 201 MIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR- 259
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V L++LY CG + A +VFD + D++ VSW +++GY + G E + +F
Sbjct: 260 -DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFD 318
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ ++ + S V A + DL K IHG + ++ VAT L+ +YAKCG
Sbjct: 319 KMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCG 378
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
EKA+++F + +D+V+WS++I G+P+EAL +F MQ + +KP T++ +L
Sbjct: 379 ETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILP 438
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA L L+LG F + + S+ GT L+ MYAKCG A F M +D V
Sbjct: 439 ACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVT 498
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++++G + G A +F +L I P+ T VG++ C +D+G +
Sbjct: 499 WNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV 558
Query: 361 RV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++ F +++ ++D+ + G L A L + + W ++A
Sbjct: 559 KLGFESDCHVKN--ALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 199/389 (51%), Gaps = 21/389 (5%)
Query: 29 TNFT-FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
TN+ +P +L +C + ++ H+ I+ +G + T L+NLY A V
Sbjct: 30 TNYLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSV 85
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD P+ + + W ++I Y EA+ M+ ++ +GL+PD ++ VL ACT +L
Sbjct: 86 FDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNL 145
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
W HG ++ G R+VF+ LVD+Y+K G++++AR VFD+MP++D+V+W++MI G
Sbjct: 146 QEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGL 205
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+ + P EA+D F +MQ ++P +++ + L +EL ++ R +F S
Sbjct: 206 SQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS-- 263
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ LID+Y+KCG + A +VF +M D+D V W +++G + NG +F +++
Sbjct: 264 AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLG 323
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM------SRVFSLTPMIEHYGCMVDLLGR 381
++ N + V +++G++ S + TP++ Y +
Sbjct: 324 NVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMY-------AK 376
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G+ ++A +L + + + W A++A
Sbjct: 377 CGETEKAKQLFWGLQGR-DLVAWSAIIAA 404
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/608 (41%), Positives = 378/608 (62%), Gaps = 4/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI F C + AI+ + M G++P FT+ VL AC LG + HS +++ G
Sbjct: 22 MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG 81
Query: 61 LDCDEFVKTSLLNLYVHC---GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE-EAI 116
L D V SL+++Y C G + D+ KVF+ +P+ NV+SWTAII+ Y G + EAI
Sbjct: 82 LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAI 141
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F +++ ++P+ FS VL AC L D T + ++ Y + G V SL+ +Y
Sbjct: 142 ELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMY 201
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ G ME AR+ FD + EK++VS+++++ GYA N +EA +F + + +T
Sbjct: 202 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 261
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
+LS AS+GA+ G + + + SN + LI MY++CG + A +VF EM+D+
Sbjct: 262 SLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 321
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ + W ++++G + +G+ A +F ++ + G +PN T+V +L C+H G++ EG++ F
Sbjct: 322 NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHF 381
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
NSM + + P +EHY CMVDLLGRSG L EA E I SMP+ +A+VW LL CR+H
Sbjct: 382 NSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGN 441
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
T+L H ++ EP + Y+LLSN+++++ +W D KIR M ++ + K GCSW+E
Sbjct: 442 TELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIE 501
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
V+ VH F VG+ SHP + +IY +LD+LA+K+K G++P TD VL DIEEE+K+ FL H
Sbjct: 502 VENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQH 561
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEK+A+AFGLI+T+ IRI KNLRVCGDCH AIK IS TGREI+VRD+NRFH G
Sbjct: 562 SEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNG 621
Query: 597 SCSCKDFW 604
CSC D+W
Sbjct: 622 VCSCNDYW 629
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 198/374 (52%), Gaps = 16/374 (4%)
Query: 82 ADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
A A KVFD +P++N+V+WT +I+ + G +AI++F + G PD F+ VL+AC
Sbjct: 2 APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 61
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC---GNMEKARRVFDQMPEKDIV 198
T+LG L+ K +H V G +V V SLVD+YAKC G+++ +R+VF+QMPE +++
Sbjct: 62 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 121
Query: 199 SWSSMIQGYASNG-FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF 257
SW+++I YA +G KEA+++F M +++P +++ VL AC +L G S+
Sbjct: 122 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 181
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ S +G +LI MYA+ GRM A K F + +K+ V +NA+V G + N + A
Sbjct: 182 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC--- 374
F +F ++ GI + TF LL G G + +G Q + L + C
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL-----LKGGYKSNQCICN 296
Query: 375 -MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
++ + R G ++ A ++ M + N I W +++ G H A + +++ LE
Sbjct: 297 ALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHGFATRALEMFHKM--LETG 353
Query: 434 NSGNYVLLSNIYSA 447
N + + SA
Sbjct: 354 TKPNEITYVAVLSA 367
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/604 (42%), Positives = 375/604 (62%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ ++ + MR EG +P V+ ACA+ I +
Sbjct: 102 MIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK 161
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + T+++++Y CG + A ++FD + +KNV+SW+A+I+ Y G +A+++FR
Sbjct: 162 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 221
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G+ PD ++ +L AC+ L +L + IH V + G + FV +LVD+Y KC
Sbjct: 222 MMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCR 281
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E AR +FD+MPE+D+V+W+ MI GYA G E+L +F M+ E + P+ MV V+
Sbjct: 282 EIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVF 341
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LGA+ +++R +F + +LGT +IDM+AKCG + A ++F M++K+ +
Sbjct: 342 ACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVIS 401
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A+++ +G + A +F + + GI PN T V LL C+HAGLV+EG +FF+ M
Sbjct: 402 WSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMW 461
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+S+ ++HY C+VDLLGR+G+LDEA +LI+SM +E + +WGA L CR HK LA
Sbjct: 462 EDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLA 521
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E L+ L+P N G+Y+LLSNIY+ + +W D AK R +M + ++KI G +W+EVD
Sbjct: 522 EKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNK 581
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
H+F VGD +HP S++IY L L KL+ G+VP T+ VL D++EE K L HSEKL
Sbjct: 582 SHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKL 641
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI T IRI KNLRVCGDCH KL+S ITGR IIVRD NRFH F EG+CSC
Sbjct: 642 AIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSC 701
Query: 601 KDFW 604
D+W
Sbjct: 702 GDYW 705
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 236/454 (51%), Gaps = 13/454 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GF + + + + G P N+T PFV++AC + Q+G H ++ K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D FV +L+++YV C + DA +FD + ++++V+WT +I GY G E++ +F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ PD ++V V+ AC +LG + A+ I Y+ +V + T+++D+YAKCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E AR +FD+M EK+++SWS+MI Y +G ++ALD+F M + P+ T+ +L
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+ L L++G + + + + L+DMY KC + A +F +M ++D V
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++ G + G + +F ++ + G+ P+ V ++ C G + + R + +
Sbjct: 301 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 360
Query: 361 R-VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH----K 415
R F L ++ M+D+ + G ++ A E+ M E N I W A++A H K
Sbjct: 361 RKKFQLDVILG--TAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQGRK 417
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
DL +L I L+S +Y+ SH
Sbjct: 418 ALDLFPMMLRSGIL-----PNKITLVSLLYACSH 446
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/608 (41%), Positives = 378/608 (62%), Gaps = 4/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI F C + AI+ + M G++P FT+ VL AC LG + HS +++ G
Sbjct: 27 MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG 86
Query: 61 LDCDEFVKTSLLNLYVHC---GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE-EAI 116
L D V SL+++Y C G + D+ KVF+ +P+ NV+SWTAII+ Y G + EAI
Sbjct: 87 LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAI 146
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F +++ ++P+ FS VL AC L D T + ++ Y + G V SL+ +Y
Sbjct: 147 ELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMY 206
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ G ME AR+ FD + EK++VS+++++ GYA N +EA +F + + +T
Sbjct: 207 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 266
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
+LS AS+GA+ G + + + SN + LI MY++CG + A +VF EM+D+
Sbjct: 267 SLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 326
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ + W ++++G + +G+ A +F ++ + G +PN T+V +L C+H G++ EG++ F
Sbjct: 327 NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHF 386
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
NSM + + P +EHY CMVDLLGRSG L EA E I SMP+ +A+VW LL CR+H
Sbjct: 387 NSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGN 446
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
T+L H ++ EP + Y+LLSN+++++ +W D KIR M ++ + K GCSW+E
Sbjct: 447 TELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIE 506
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
V+ VH F VG+ SHP + +IY +LD+LA+K+K G++P TD VL DIEEE+K+ FL H
Sbjct: 507 VENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQH 566
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEK+A+AFGLI+T+ IRI KNLRVCGDCH AIK IS TGREI+VRD+NRFH G
Sbjct: 567 SEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNG 626
Query: 597 SCSCKDFW 604
CSC D+W
Sbjct: 627 VCSCNDYW 634
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 198/374 (52%), Gaps = 16/374 (4%)
Query: 82 ADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
A A KVFD +P++N+V+WT +I+ + G +AI++F + G PD F+ VL+AC
Sbjct: 7 APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 66
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC---GNMEKARRVFDQMPEKDIV 198
T+LG L+ K +H V G +V V SLVD+YAKC G+++ +R+VF+QMPE +++
Sbjct: 67 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 126
Query: 199 SWSSMIQGYASNG-FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF 257
SW+++I YA +G KEA+++F M +++P +++ VL AC +L G S+
Sbjct: 127 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 186
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ S +G +LI MYA+ GRM A K F + +K+ V +NA+V G + N + A
Sbjct: 187 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC--- 374
F +F ++ GI + TF LL G G + +G Q + L + C
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL-----LKGGYKSNQCICN 301
Query: 375 -MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
++ + R G ++ A ++ M + N I W +++ G H A + +++ LE
Sbjct: 302 ALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHGFATRALEMFHKM--LETG 358
Query: 434 NSGNYVLLSNIYSA 447
N + + SA
Sbjct: 359 TKPNEITYVAVLSA 372
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/604 (42%), Positives = 374/604 (61%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + ND FQ +++ + MR GF P +FTF VLKAC F +G H ++K
Sbjct: 113 MVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTC 172
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D +V LL+LY G D L+VF+++P +V+ W+ +IS Y EA+ +F
Sbjct: 173 YEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFG 232
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + P+ F+ VL +C + +L K +H +V + G NVFV+ +L+D+YAKCG
Sbjct: 233 QMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCG 292
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ + ++F ++P ++ V+W++MI GY +G +AL ++ NM ++ T VL
Sbjct: 293 RLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLR 352
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL A+ELG S + + + V+G LIDMYAKCG + A VF + ++D++
Sbjct: 353 ACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEIS 412
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++SG SM+G V A F +++ PN TFV +L C++AGL+D G+ +F SM
Sbjct: 413 WNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMV 472
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + P +EHY CMV LLGRSG LD+A +LI+ +P+EPN VW ALL C +H DL
Sbjct: 473 QDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLG 532
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
Q++ ++P + +VLLSNIY+ + +WN A +R M +KG++K G SW+E G+
Sbjct: 533 IMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGI 592
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F VGD SHP + I L+ L K + AG+VP + VL D+E++EK+ L HSE+L
Sbjct: 593 VHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERL 652
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
ALAFGLI T + IRI KNLR+C DCH AIKLISKI R+II+RD NRFH F +G CSC
Sbjct: 653 ALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSC 712
Query: 601 KDFW 604
D+W
Sbjct: 713 GDYW 716
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 215/415 (51%), Gaps = 4/415 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+G+V + ++ ++ + EG F F +LK +L H+ I K G
Sbjct: 12 LIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLG 71
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV T+L++ Y CG + A + FD I K++VSWT +++ Y ++++ +F
Sbjct: 72 HESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFA 131
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G P+ F+ VL AC L S K +HG V + +++V L+DLY K G
Sbjct: 132 EMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFG 191
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ RVF++MP+ D++ WS MI YA + +EA+++F M+R + P +T VL
Sbjct: 192 DANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQ 251
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+CAS+ L+LG + + N + L+D+YAKCGR+ + K+F E+ ++++V
Sbjct: 252 SCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVT 311
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SM 359
WN ++ G +G A ++ + +C +Q + T+ +L C ++ G Q + S+
Sbjct: 312 WNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSL 371
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ ++ + ++D+ + G + A L+ M E + I W A+++G +H
Sbjct: 372 KTIYDKDVVVGN--ALIDMYAKCGSIKNA-RLVFDMLSERDEISWNAMISGYSMH 423
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 164/322 (50%), Gaps = 6/322 (1%)
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG--LKPDSFSIVRVLTACTQLGDLS 148
+PD+N VS+ +I GY+ L+E +++F R+ G L P F+ + L + +L+
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+ +H + + G N FV T+L+D YA CG++ AR+ FD + KD+VSW+ M+ YA
Sbjct: 61 YS--LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYA 118
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
N +++L +F M+ P ++T GVL AC L A +G + + + +
Sbjct: 119 ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLY 178
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+G L+D+Y K G +VF EM D + W+ ++S + + + A +FGQ+ +
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAF 238
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
+ PN TF +L C + G+Q + +V L + ++D+ + G+LD +
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKV-GLDGNVFVSNALMDVYAKCGRLDNS 297
Query: 389 HELIKSMPMEPNAIVWGALLAG 410
+L +P N + W ++ G
Sbjct: 298 MKLFMELP-NRNEVTWNTMIVG 318
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/605 (42%), Positives = 382/605 (63%), Gaps = 33/605 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG + A++ Y M + G LP ++TFPF+LK+CA+ F+ G + H ++K G
Sbjct: 62 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG 121
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDD------------------------------ 90
D D +V TSL+++YV G L DA KVFD+
Sbjct: 122 CDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFD 181
Query: 91 -IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
IP K+VVSW A+ISGY GN +EA+ +F+ ++ ++PD ++V V++AC Q G +
Sbjct: 182 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 241
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++++ G G N+ + +L+DLY+KCG +E A +F+ +P KD++SW+++I GY
Sbjct: 242 GRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTH 301
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME-RNEFLSNPV 268
KEAL +F M R P TM+ +L ACA LGA+++G W +++ R + ++N
Sbjct: 302 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANAS 361
Query: 269 -LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMYAKCG + A +VF + K WNA++ G +M+G +F +F ++ K
Sbjct: 362 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKN 421
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI+P+ TFVGLL C+H+G++D GR F SM++ + +TP +EHYGCM+DLLG SG E
Sbjct: 422 GIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKE 481
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E+I +M MEP+ ++W +LL C++H +L E LI +EP N G+YVLLSNIY+
Sbjct: 482 AEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYAT 541
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WN+ A R+++ DKG++K+ GCS +E+D VVHEF++GD HP + +IY L+E+
Sbjct: 542 AGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 601
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRVC +C
Sbjct: 602 LEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 661
Query: 568 HEAIK 572
HEA K
Sbjct: 662 HEAYK 666
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/554 (44%), Positives = 362/554 (65%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
++H+ I GL D + T +YV + A VF+DIP+ W +I G+ +G
Sbjct: 738 KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDG 797
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
++ ++ +++ +GLKPD F+ L +C L DL K IH ++ G ++FV
Sbjct: 798 RFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDA 857
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+LVD+YAKCG++E AR VFD+M +D+VSW+SMI GYA NG+ E L F M+ + P
Sbjct: 858 ALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIP 917
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+++ VL AC +LGAL G W S++ + F + ++ T ++DMY+KCG + A +F
Sbjct: 918 NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 977
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
E KD V W+A+++ ++G+ + A +F Q+ K G++P+ TF +L C+H+GL++
Sbjct: 978 DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLE 1037
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
EG+ +F M+ F + + +Y CMVDLLGR+GQL EA +LI++MP+EP+A +WG+LL
Sbjct: 1038 EGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 1097
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CR+H DLAE + + L L+P ++G +VLLSNIY+A +WN+ K+R MM +G KI+
Sbjct: 1098 CRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQ 1157
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
G S VE D VH+F VGD SHP EK+Y+KL+ELA +K G+VP TD VL DIEEE K+
Sbjct: 1158 GFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKE 1217
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L+ HSE+LA+AFGLI T+P +RI KNLR+CGDCH AIKLISKI R I+VRD +RF
Sbjct: 1218 AALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRF 1277
Query: 591 HCFIEGSCSCKDFW 604
H F +G CSC D+W
Sbjct: 1278 HRFEDGVCSCGDYW 1291
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 309/525 (58%), Gaps = 2/525 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+ G+ N+ + A+ ++ M + + T V+ ACA+ + + G H L+++
Sbjct: 176 MVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRR 235
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D D + SLLNLY G A +F +P+K+V+SW+ +I+ Y N EA+N+F
Sbjct: 236 EFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLF 295
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ + +P+S ++V L AC +L K IH G + V+T+L+D+Y KC
Sbjct: 296 HEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKC 355
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++A +F ++P+KD+VSW +++ GYA NG +++ +F NM + ++P+ +V +L
Sbjct: 356 SCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKIL 415
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+A + LG + + ++ R+ F SN +G +LI++Y+KCG + A K+F+ M +D V
Sbjct: 416 AASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVV 475
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEK-CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+W+++++ ++G A +F Q+ K ++PN TF+ +L C+HAGLV+EG + F+
Sbjct: 476 IWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDR 535
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + L P EH+G MVDLLGR GQL +A ++I MP+ VWGALL CR+H +
Sbjct: 536 MVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIE 595
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
+ E L L+P ++G Y+LLSNIY+ KW++ A++R+ + ++G++K+ G S VEV
Sbjct: 596 MGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVR 655
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
G VH FL D HP S+KIY L +L ++ ++P D +L D
Sbjct: 656 GGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHD 700
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 229/459 (49%), Gaps = 21/459 (4%)
Query: 2 IRGFVSNDCFQHAIEFYNSMR-NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+R + ++ + ++ M G P NFT P LKACA +LG H K
Sbjct: 74 LRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKND 133
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ D FV ++L+ LY CG + +ALKVF++ + V WT++++GY + EEA+ +F
Sbjct: 134 EIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALF 193
Query: 120 RRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+++ + D ++V V++AC QL ++ +HG V ++ + SL++LYAK
Sbjct: 194 SQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAK 253
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G + A +F +MPEKD++SWS+MI YA+N EAL++F+ M + +P T+V
Sbjct: 254 TGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSA 313
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L ACA LE G F + + T LIDMY KC +A +F+ + KD
Sbjct: 314 LQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDV 373
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG------ 352
V W A++SG + NG + GVF + GIQP+ V +L + G+ +
Sbjct: 374 VSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGY 433
Query: 353 --RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
R FN S VF +IE Y + G L +A +L K M + + ++W +++A
Sbjct: 434 VVRSGFN--SNVFVGASLIELY-------SKCGSLGDAVKLFKGMIVR-DVVIWSSMIAA 483
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+H + A + +Q++ N LS + + SH
Sbjct: 484 YGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSH 522
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 179/319 (56%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRGF ++ F ++E Y+ M +G P F FPF LK+CA D Q G H +V G
Sbjct: 789 MIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCG 848
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV +L+++Y CG + A VFD + +++VSWT++ISGY + G E + F
Sbjct: 849 CSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFD 908
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ P+ SI+ VL AC LG L +W H YV + G ++ VAT+++D+Y+KCG
Sbjct: 909 LMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCG 968
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ AR +FD+ KD+V WS+MI Y +G ++A+D+F M + ++P + T VLS
Sbjct: 969 SLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLS 1028
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G LE G M ++ + ++D+ + G++++A + M + D
Sbjct: 1029 ACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDA 1088
Query: 299 VVWNAVVSGLSMNGYVKVA 317
+W +++ ++ + +A
Sbjct: 1089 SIWGSLLGACRIHNNLDLA 1107
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 192/364 (52%), Gaps = 11/364 (3%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
HS + K G+ D F T L +LY C L A KVFD+ P NV W + + Y E
Sbjct: 24 HSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQW 83
Query: 113 EEAINMFRRLL-HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVAT 170
EE + +F ++ G PD+F+I L AC L L K IHG+ + + G ++FV +
Sbjct: 84 EETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGS 143
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN--- 227
+LV+LY+KCG M +A +VF++ D V W+SM+ GY N P+EAL +F M +
Sbjct: 144 ALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVV 203
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
L P T+V V+SACA L ++ G + R EF + L +L+++YAK G A
Sbjct: 204 LDP--VTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAA 261
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+F +M +KD + W+ +++ + N A +F ++ + +PN T V L C +
Sbjct: 262 NLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSR 321
Query: 348 LVDEGRQFFN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
++EG++ ++ + F L + ++D+ + DEA +L + +P + + + W A
Sbjct: 322 NLEEGKKIHKIAVWKGFELDFSVS--TALIDMYMKCSCPDEAVDLFQRLP-KKDVVSWVA 378
Query: 407 LLAG 410
LL+G
Sbjct: 379 LLSG 382
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 163/348 (46%), Gaps = 29/348 (8%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+V + AC +S +H V + G + F AT L LYAKC +++ AR+VFD+ P
Sbjct: 7 LVDLFQACNNGRSVSQ---LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP 63
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALELGV 252
++ W+S ++ Y +E L +F+ M P+ +T+ L ACA L LELG
Sbjct: 64 HPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGK 123
Query: 253 WASSFMERN-EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
F ++N E S+ +G+ L+++Y+KCG+M +A KVF E + D V+W ++V+G N
Sbjct: 124 VIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQN 183
Query: 312 GYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEG---------RQFFNSMSR 361
+ A +F Q+ + + T V ++ C V G R+F +
Sbjct: 184 NDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPL 243
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
V SL ++L ++G A L MP E + I W ++A ++ + A
Sbjct: 244 VNSL----------LNLYAKTGCEKIAANLFSKMP-EKDVISWSTMIACYANNEAANEAL 292
Query: 422 HVLNQLIA--LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
++ +++I EP NS V + S + KI + KG +
Sbjct: 293 NLFHEMIEKRFEP-NSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFE 339
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 131/283 (46%), Gaps = 4/283 (1%)
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
S K H + G + + T +Y ++ A VF+ +P W+ MI+G
Sbjct: 733 FSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRG 792
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
+A++G +L+++ M + LKP+ + L +CA L L+ G + ++
Sbjct: 793 FATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSND 852
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
+ L+DMYAKCG + A VF +M +D V W +++SG + NGY G F +
Sbjct: 853 LFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRS 912
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQL 385
G+ PN + + +L C + G + +G F + + + F ++ ++D+ + G L
Sbjct: 913 SGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVA--TAIMDMYSKCGSL 970
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
D A L + + + W A++A +H A + +Q++
Sbjct: 971 DLARCLFDETAGK-DLVCWSAMIASYGIHGHGRKAIDLFDQMV 1012
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/633 (40%), Positives = 371/633 (58%), Gaps = 29/633 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + S+ F H++ F+ M G P + FP VLK+C D + G H I++ G
Sbjct: 77 IIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLG 136
Query: 61 LDCDEFVKTSLLNLYV-----------------------------HCGYLADALKVFDDI 91
+ D + +L+N+Y YL KVF+ +
Sbjct: 137 MGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMM 196
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
P +++VSW +ISG G E+A+ M R + + L+PDSF++ VL + +L K
Sbjct: 197 PKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGK 256
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
IHGY G +VF+ +SL+D+YAKC ++ + RVF +P+ D +SW+S+I G NG
Sbjct: 257 EIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNG 316
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
E L F M +KP + + ++ ACA L L LG ++ R+ F N + +
Sbjct: 317 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 376
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
L+DMYAKCG + A +F +M+ D V W A++ G +++G+ A +F ++E G++P
Sbjct: 377 ALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKP 436
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
N F+ +L C+HAGLVDE ++FNSM++ + + P +EHY + DLLGR G+L+EA+E
Sbjct: 437 NYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEF 496
Query: 392 IKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKW 451
I M +EP VW LLA CR+HK +LAE V +L ++P N G YVLLSNIYSA+ +W
Sbjct: 497 ISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRW 556
Query: 452 NDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAA 511
DA K+R M DKG++K CSW+E+ VH F+ GD SHP ++I L L +++
Sbjct: 557 KDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMERE 616
Query: 512 GFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAI 571
G+V T VL D+EEE+K+Y L HSE+LA+ FG+I+T IR+ KNLRVC DCH A
Sbjct: 617 GYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTAT 676
Query: 572 KLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K ISKI GREI+VRDN+RFH F +G CSC DFW
Sbjct: 677 KFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 191/393 (48%), Gaps = 35/393 (8%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-NVVSWTAIISGYINEGN 111
H+ I++ L + T +L++Y + L D+L +F+ +P ++W +II Y + G
Sbjct: 28 HAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGL 86
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+++ F ++L G PD VL +CT + DL + +HG + G G +++ +
Sbjct: 87 FLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNA 146
Query: 172 LVDLYAKCGNMEKA-----------------------------RRVFDQMPEKDIVSWSS 202
L+++Y+K ++E+ R+VF+ MP++DIVSW++
Sbjct: 147 LMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNT 206
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
+I G A NG ++AL M M +L+P+ +T+ VL A L G + RN
Sbjct: 207 VISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNG 266
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
+ ++ +G++LIDMYAKC R+ +C+VF + D + WN++++G NG F
Sbjct: 267 YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQ 326
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGR 381
Q+ I+PN +F ++ C H + G+Q + R F I +VD+ +
Sbjct: 327 QMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIA--SALVDMYAK 384
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
G + A + M + + + W A++ G LH
Sbjct: 385 CGNIRTARWIFDKMELY-DMVSWTAMIMGYALH 416
>gi|255571517|ref|XP_002526706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534006|gb|EEF35728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 461
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/361 (66%), Positives = 291/361 (80%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG VS+DCF +IEFY SMR +GFLP NFTFPFV+KACAR DFQLG+ H+L+VK G
Sbjct: 85 MIRGLVSSDCFTESIEFYYSMRKKGFLPNNFTFPFVIKACARLLDFQLGIMMHTLVVKLG 144
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
DC+ FV TSL++LY CG + DALK+ D IP+ N+VSWTAIISGYI G EAI++FR
Sbjct: 145 FDCNLFVNTSLVSLYAKCGSIDDALKMLDLIPESNIVSWTAIISGYIGVGKYREAIDLFR 204
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+L GL+PDSF+IV+VL+AC Q+GDL+ +WI Y+ E RNVFV TSLVDLYAK G
Sbjct: 205 RMLETGLRPDSFTIVQVLSACIQIGDLANGEWIDRYITENVMARNVFVTTSLVDLYAKHG 264
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
NMEKAR +FD M E+DIVSWS+MIQGYASNG PK+ALD+F+ M LKP++Y MVG L
Sbjct: 265 NMEKARCLFDGMAERDIVSWSAMIQGYASNGLPKDALDLFFKMLNAGLKPDHYAMVGFLC 324
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LGALELG W S+ M+R EF +N VLGT LIDMYAKCG MA+A +VF+ +K KD+ V
Sbjct: 325 ACARLGALELGDWGSNLMDRTEFFTNHVLGTALIDMYAKCGSMAKAWEVFKGIKGKDRAV 384
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA +SGL+MNG+ K AFG+FGQ+E+ GIQP+GNTFVGLLCGCTHAGLVDEGR++F+SM
Sbjct: 385 WNAAISGLAMNGHEKAAFGLFGQMERFGIQPDGNTFVGLLCGCTHAGLVDEGRKYFHSMG 444
Query: 361 R 361
R
Sbjct: 445 R 445
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 199/382 (52%), Gaps = 17/382 (4%)
Query: 46 FQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISG 105
F G S+I+++ D ++ T L +F+ I + +VV + +I G
Sbjct: 44 FDQGSYLWSMIIRSSFDFNDTTYTRL---------------IFNQIKEPDVVLYNTMIRG 88
Query: 106 YINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
++ E+I + + +G P++F+ V+ AC +L D +H V + G N
Sbjct: 89 LVSSDCFTESIEFYYSMRKKGFLPNNFTFPFVIKACARLLDFQLGIMMHTLVVKLGFDCN 148
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
+FV TSLV LYAKCG+++ A ++ D +PE +IVSW+++I GY G +EA+D+F M
Sbjct: 149 LFVNTSLVSLYAKCGSIDDALKMLDLIPESNIVSWTAIISGYIGVGKYREAIDLFRRMLE 208
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
L+P+ +T+V VLSAC +G L G W ++ N N + T+L+D+YAK G M +
Sbjct: 209 TGLRPDSFTIVQVLSACIQIGDLANGEWIDRYITENVMARNVFVTTSLVDLYAKHGNMEK 268
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
A +F M ++D V W+A++ G + NG K A +F ++ G++P+ VG LC C
Sbjct: 269 ARCLFDGMAERDIVSWSAMIQGYASNGLPKDALDLFFKMLNAGLKPDHYAMVGFLCACAR 328
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
G ++ G N M R T + ++D+ + G + +A E+ K + + A VW
Sbjct: 329 LGALELGDWGSNLMDRTEFFTNHVLGTA-LIDMYAKCGSMAKAWEVFKGIKGKDRA-VWN 386
Query: 406 ALLAGCRLHKKTDLAEHVLNQL 427
A ++G ++ A + Q+
Sbjct: 387 AAISGLAMNGHEKAAFGLFGQM 408
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 14/270 (5%)
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
L K +H + G + ++ + ++ + R +F+Q+ E D+V +++MI+G
Sbjct: 29 LKQLKHVHAALLRLGFDQGSYLWSMIIRSSFDFNDTTYTRLIFNQIKEPDVVLYNTMIRG 88
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
S+ E+++ +Y+M+++ P +T V+ ACA L +LG+ + + + F N
Sbjct: 89 LVSSDCFTESIEFYYSMRKKGFLPNNFTFPFVIKACARLLDFQLGIMMHTLVVKLGFDCN 148
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
+ T+L+ +YAKCG + A K+ + + + V W A++SG G + A +F ++ +
Sbjct: 149 LFVNTSLVSLYAKCGSIDDALKMLDLIPESNIVSWTAIISGYIGVGKYREAIDLFRRMLE 208
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQF-----FNSMSR-VFSLTPMIEHYGCMVDLLG 380
G++P+ T V +L C G + G N M+R VF T +VDL
Sbjct: 209 TGLRPDSFTIVQVLSACIQIGDLANGEWIDRYITENVMARNVFVTTS-------LVDLYA 261
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ G +++A L M E + + W A++ G
Sbjct: 262 KHGNMEKARCLFDGMA-ERDIVSWSAMIQG 290
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/604 (42%), Positives = 383/604 (63%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+G+ + I Y M+ P FTF +VLKAC +G + H K G
Sbjct: 71 IIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYG 130
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV+ SL+++Y G ++ A VFD + D+ VVSWT+IISGY+ G+ EA+N+F+
Sbjct: 131 FGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFK 190
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +KPD ++V V+TA T + DL K IHG V + G + SL +YAK G
Sbjct: 191 EMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRG 250
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E AR F++M + +++ W++MI GYA+NG+ +EA+ +F M +N++ + TM +
Sbjct: 251 LVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVL 310
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A +G+LEL W ++ ++E+ + + T LIDMYAKCG + A VF + DKD V+
Sbjct: 311 ASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVL 370
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+ ++ G ++G+ + A ++ ++++ G+ PN TF+GLL C ++GLV EG + F+ M
Sbjct: 371 WSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP 430
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P +HY C+VDLLGR+G L++A++ I SMP++P VWGALL+ C++H+K L
Sbjct: 431 D-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLG 489
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E QL L+P+N+G+YV LSN+Y+++H W A +R MM KG+ K G S +E++G
Sbjct: 490 EIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGN 549
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+ F VGD SHP S++I+ +LD L +LKAAG+VP + VL D+ EE + L HSE+L
Sbjct: 550 LETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERL 609
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+G+I+TAP +RI KNLR C +CH AIKLISK+ REII+RD RFH F +G CSC
Sbjct: 610 AVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSC 669
Query: 601 KDFW 604
DFW
Sbjct: 670 GDFW 673
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 204/414 (49%), Gaps = 5/414 (1%)
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
++ +GL F+ +N +H G + A K F ++ + +++ W AII GY + ++
Sbjct: 25 LIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAP 84
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
I M+ + + P+ F+ + VL AC K IHG + G G NVFV SLV +
Sbjct: 85 IRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSM 144
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
YAK G + AR VFD++ ++ +VSW+S+I GY NG P EAL++F M++ N+KP++ +
Sbjct: 145 YAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIAL 204
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
V V++A ++ L G + + P + +L MYAK G + A F M+
Sbjct: 205 VSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK 264
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+ ++WNA++SG + NGY + A +F ++ I+ + T + G ++ R
Sbjct: 265 PNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWL 324
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
+S+ + G ++D+ + G + A + + + + ++W ++ G LH
Sbjct: 325 DGYISKSEYRDDTFVNTG-LIDMYAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHG 382
Query: 416 KTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
A + N++ + P N G ++ L S + ++ +M D GI+
Sbjct: 383 HGQEAICLYNEMKQAGVCP-NDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIE 435
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/604 (41%), Positives = 380/604 (62%), Gaps = 2/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ N A+EF+ M +G +TFP +L AC+ G + H IVK+G
Sbjct: 236 MVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG 295
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +V+++L+++Y CG L +A + + + D +VVSW +++ G++ G EEA+ +F+
Sbjct: 296 FGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFK 355
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ R +K D ++ VL C +G ++ K +HG + + G V+ +LVD+YAK G
Sbjct: 356 NMHGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTG 413
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M+ A VF++M EKD++SW+S++ GYA N +E+L +F +M+ + P+ + + +LS
Sbjct: 414 DMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILS 473
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA L LE G ++ + + +L+ MYAKCG + A +F M+ KD +
Sbjct: 474 ACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVIT 533
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ G + NG + + + + G +P+ TF+GLL C+HAGLVDEGR++F M+
Sbjct: 534 WTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMN 593
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+V+ + P EHY CM+DL GRSG+LDEA +L+ M ++P+A VW +LL+ CR+H+ +LA
Sbjct: 594 KVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELA 653
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E L LEP N+ YV+LSN+YSAS KWND AKIR +M KGI K GCSW+E++
Sbjct: 654 ERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSR 713
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V+ F+ D HP +IY+K+DE+ ++K AG+VP L D+++E K+ LA HSEKL
Sbjct: 714 VNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKL 773
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL+ P IRI KNLRVCGDCH A+K IS++ R II+RD+N FH F EG CSC
Sbjct: 774 AVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECSC 833
Query: 601 KDFW 604
D+W
Sbjct: 834 GDYW 837
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 221/409 (54%), Gaps = 6/409 (1%)
Query: 4 GFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC 63
G+ C A + + SMR EG+ + FT VL+ C+ Q G H +VK G +
Sbjct: 136 GYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEG 195
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFD--DIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ FV T L+++Y C +++A +F + KN V WTA+++GY G+ +A+ FR
Sbjct: 196 NVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRY 255
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ +G++ + ++ +LTAC+ + + +HG++ ++G G NV+V ++LVD+YAKCG+
Sbjct: 256 MHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGD 315
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
++ A+ + + M + D+VSW+S++ G+ +G +EAL +F NM N+K + YT VL+
Sbjct: 316 LKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNC 375
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C +G++ + + F + ++ L+DMYAK G M A VF +M +KD + W
Sbjct: 376 CV-VGSINPKS-VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISW 433
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
++V+G + N + + +F + G+ P+ +L C L++ G+Q +
Sbjct: 434 TSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIK 493
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
L Y +V + + G LD+A + SM ++ + I W A++ G
Sbjct: 494 S-GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVK-DVITWTAIIVG 540
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 185/387 (47%), Gaps = 55/387 (14%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA---------- 115
+ LLN G + DA K+FD +P K+ SW +IS Y+N G L EA
Sbjct: 66 YQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCK 125
Query: 116 ---------------------INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
++FR + G K F++ VL C+ LG + T + IH
Sbjct: 126 SSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIH 185
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD--QMPEKDIVSWSSMIQGYASNGF 212
G+V + G NVFV T LVD+YAKC + +A +F + K+ V W++M+ GYA NG
Sbjct: 186 GFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGD 245
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+A++ F M + ++ YT +L+AC+S+ A G F+ ++ F SN + +
Sbjct: 246 GYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSA 305
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+DMYAKCG + A + M+D D V WN+++ G +G + A +F + ++ +
Sbjct: 306 LVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKID 365
Query: 333 GNTFVGLLCGC---------THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
TF +L C H ++ G + + +S +VD+ ++G
Sbjct: 366 DYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNA------------LVDMYAKTG 413
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAG 410
+D A+ + + M +E + I W +L+ G
Sbjct: 414 DMDCAYTVFEKM-LEKDVISWTSLVTG 439
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 37/293 (12%)
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ---------- 205
+ A +++ L++ +K G + AR++FD+MP+KD SW++MI
Sbjct: 55 HTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVE 114
Query: 206 ---------------------GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
GY G EA D+F +M+ E K +T+ VL C+S
Sbjct: 115 ARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSS 174
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR--EMKDKDQVVWN 302
LG ++ G F+ +N F N + T L+DMYAKC +++A +F+ E K+ V+W
Sbjct: 175 LGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWT 234
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
A+V+G + NG A F + G++ N TF +L C+ G Q + +
Sbjct: 235 AMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKS 294
Query: 363 -FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
F ++ +VD+ + G L A ++++M + + + W +L+ G H
Sbjct: 295 GFGSNVYVQ--SALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLMVGFVRH 344
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/604 (42%), Positives = 383/604 (63%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+G+ + I Y M+ P FTF +VLKAC +G + H K G
Sbjct: 56 IIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYG 115
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV+ SL+++Y G ++ A VFD + D+ VVSWT+IISGY+ G+ EA+N+F+
Sbjct: 116 FGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFK 175
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +KPD ++V V+TA T + DL K IHG V + G + SL +YAK G
Sbjct: 176 EMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRG 235
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E AR F++M + +++ W++MI GYA+NG+ +EA+ +F M +N++ + TM +
Sbjct: 236 LVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVL 295
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A +G+LEL W ++ ++E+ + + T LIDMYAKCG + A VF + DKD V+
Sbjct: 296 ASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVL 355
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+ ++ G ++G+ + A ++ ++++ G+ PN TF+GLL C ++GLV EG + F+ M
Sbjct: 356 WSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP 415
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P +HY C+VDLLGR+G L++A++ I SMP++P VWGALL+ C++H+K L
Sbjct: 416 D-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLG 474
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E QL L+P+N+G+YV LSN+Y+++H W A +R MM KG+ K G S +E++G
Sbjct: 475 EIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGN 534
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+ F VGD SHP S++I+ +LD L +LKAAG+VP + VL D+ EE + L HSE+L
Sbjct: 535 LETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERL 594
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+G+I+TAP +RI KNLR C +CH AIKLISK+ REII+RD RFH F +G CSC
Sbjct: 595 AVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSC 654
Query: 601 KDFW 604
DFW
Sbjct: 655 GDFW 658
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 204/414 (49%), Gaps = 5/414 (1%)
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
++ +GL F+ +N +H G + A K F ++ + +++ W AII GY + ++
Sbjct: 10 LIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAP 69
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
I M+ + + P+ F+ + VL AC K IHG + G G NVFV SLV +
Sbjct: 70 IRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSM 129
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
YAK G + AR VFD++ ++ +VSW+S+I GY NG P EAL++F M++ N+KP++ +
Sbjct: 130 YAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIAL 189
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
V V++A ++ L G + + P + +L MYAK G + A F M+
Sbjct: 190 VSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK 249
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+ ++WNA++SG + NGY + A +F ++ I+ + T + G ++ R
Sbjct: 250 PNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWL 309
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
+S+ + G ++D+ + G + A + + + + ++W ++ G LH
Sbjct: 310 DGYISKSEYRDDTFVNTG-LIDMYAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHG 367
Query: 416 KTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
A + N++ + P N G ++ L S + ++ +M D GI+
Sbjct: 368 HGQEAICLYNEMKQAGVCP-NDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIE 420
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/604 (43%), Positives = 360/604 (59%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G V N CF AI + M G + T VL A D LG+ L +K G
Sbjct: 178 MVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVG 237
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+V T L LY CG + A +F I ++VS+ A+ISGY E ++ +F+
Sbjct: 238 FHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFK 297
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
LL G K +S SIV ++ G L + IHG+ ++G N V+T+L +Y++
Sbjct: 298 ELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLN 357
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E AR +FD+ EK + SW++MI GYA NG ++A+ +F MQ+ ++P T+ +LS
Sbjct: 358 EIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILS 417
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LGAL LG W + R F SN + T LIDMYAKCG + +A ++F M +K+ V
Sbjct: 418 ACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVT 477
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++SG ++GY A +F ++ + P G TF+ +L C+HAGLV EG + F SM
Sbjct: 478 WNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMV 537
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
P+ EHY CMVDLLGR+G LD+A + I+ MP+EP VWGALL C +HK +LA
Sbjct: 538 HDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLA 597
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
++L L+P N G YVLLSNIYSA + +AA +R ++ + + K GC+ +EV
Sbjct: 598 RLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANT 657
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H F GD SHP + IY+ L++L K++ AGF T L D+EEEEK+ + HSEKL
Sbjct: 658 LHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKL 717
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLIT+ P IRI KNLRVC DCH A K ISKIT R I+VRD NRFH F +G CSC
Sbjct: 718 AIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSC 777
Query: 601 KDFW 604
D+W
Sbjct: 778 GDYW 781
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 231/473 (48%), Gaps = 10/473 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR F N+ A+ Y +R L P NFT+ FV+ + L + A
Sbjct: 79 LIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS---IVA 135
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D FV ++++ Y +A A KVFD + +++ V W ++SG + +EAI +F
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G+ DS ++ VL +L DL+ I + G + +V T L LY+KC
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E AR +F Q+ + D+VS+++MI GY N + ++ +F + K ++VG++
Sbjct: 256 GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI 315
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
G L L F ++ +SN + T L +Y++ + A +F E +K
Sbjct: 316 PVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLA 375
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG + NG + A +F +++KC ++PN T +L C G + G+ + +
Sbjct: 376 SWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLI 435
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+R S I ++D+ + G + EA L MP E NA+ W A+++G LH
Sbjct: 436 NRE-SFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMISGYGLHGYGHE 493
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKW--NDAAKI-RSMMGDKGIQKI 469
A ++ N+++ +G LS +Y+ SH + +I RSM+ D G + +
Sbjct: 494 ALNLFNEMLHSRVSPTG-VTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPL 545
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/567 (44%), Positives = 376/567 (66%), Gaps = 9/567 (1%)
Query: 31 FTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDD 90
T+PFV+KAC G+ H+ +VK+G +CD ++ SL++LY + L A ++F
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
D++VVSW A+I GY+ G + +F R++ R D S ++ +G + A
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCR----DVISWNTIINGYAIVGKIDEA 116
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
K + + E RN+ S++ + KCGN+E+A +F +MP +D+VSW+SM+ YA
Sbjct: 117 KRLFDEMPE----RNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQC 172
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G P EAL +F M+ +KP T+V +LSACA LGAL+ G+ +++ N N ++G
Sbjct: 173 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG 232
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
T L+DMYAKCG+++ A +VF M+ KD + WN +++G++++G+VK A +F ++++ ++
Sbjct: 233 TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVE 292
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
PN TFV +L C+HAG+VDEG++ + MS + + P +EHY C++DLL R+G L+EA E
Sbjct: 293 PNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAME 352
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
LI +MPMEPN GALL GCR+H +L E V +LI L+P +SG Y+LLSNIY+A+ K
Sbjct: 353 LIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKK 412
Query: 451 WNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKA 510
W+DA K+R++M GI K+ G S +E+ G+VH F+ GD SHP S KIY KL+E+ T+LK+
Sbjct: 413 WDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKS 472
Query: 511 A-GFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
A G+ T +VL D+EEE+K++ LA HSEKLA+A+GL+ K+ IRI KNLRVC DCH
Sbjct: 473 AIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHH 532
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEG 596
KLISK+ GREIIVRD NRFH F +G
Sbjct: 533 VTKLISKVYGREIIVRDRNRFHHFEDG 559
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ ++ MR G PT T +L ACA G+ H+ I ++ + V T+L++
Sbjct: 178 ALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVD 237
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG ++ A +VF+ + K+V++W II+G G+++EA +F+ + ++P+ +
Sbjct: 238 MYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDIT 297
Query: 134 IVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
V +L+AC+ G + K + + G V ++DL A+ G +E+A + M
Sbjct: 298 FVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTM 357
Query: 193 P 193
P
Sbjct: 358 P 358
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/618 (42%), Positives = 377/618 (61%), Gaps = 31/618 (5%)
Query: 18 YNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVH 77
Y MR +G F+FP +LKA +R G+ H L K G D D FV+T L+ +Y
Sbjct: 110 YERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAA 169
Query: 78 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
CG +A+A +FD + ++VV+W+ +I GY G +A+ +F + + ++PD + V
Sbjct: 170 CGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTV 229
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM--------------- 182
L+AC + G+LS K IH ++ E + + ++LV +YA CG+M
Sbjct: 230 LSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNL 289
Query: 183 ----------------EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE 226
E AR VF+QM +KD+V WS+MI GYA + P+EAL++F MQ
Sbjct: 290 VASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSL 349
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+KP+ TM+ V++ACA LGAL+ W F+++N F + LI+MYAKCG + +A
Sbjct: 350 GIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERA 409
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
++F +M K+ + W ++S +M+G A F Q+E I+PNG TFVG+L C+HA
Sbjct: 410 RRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHA 469
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
GLV+EGR+ F SM ++TP HYGCMVDL GR+ L EA EL+++MP+ PN I+WG+
Sbjct: 470 GLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGS 529
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
L+A CR+H + +L E +L+ L+P + G +V LSNIY+ + +W D ++R +M KGI
Sbjct: 530 LMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGI 589
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
K RGCS E++ +HEFLV D SH +++IY KL E+ +KLK G+ P T +L D+EE
Sbjct: 590 SKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEE 649
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
EEK+ + HSEKLAL +GL+ IRI KNLRVC DCH IKL SK+ REI+VRD
Sbjct: 650 EEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRD 709
Query: 587 NNRFHCFIEGSCSCKDFW 604
RFH + +G CSCKD+W
Sbjct: 710 RTRFHHYKDGVCSCKDYW 727
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 189/366 (51%), Gaps = 37/366 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + F A+ + M+N P VL AC R + G H I++
Sbjct: 194 MIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENN 253
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS---------------------- 98
+ D ++++L+ +Y CG + AL +F+ + KN+V+
Sbjct: 254 IVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFN 313
Query: 99 ---------WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
W+A+ISGY + +EA+N+F + G+KPD +++ V+TAC LG L
Sbjct: 314 QMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQ 373
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
AKWIH +V++ G G + + +L+++YAKCG++E+ARR+FD+MP K+++SW+ MI +A
Sbjct: 374 AKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAM 433
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG--VWASSFMERNEFLSNP 267
+G AL F+ M+ EN++P T VGVL AC+ G +E G ++ S E N
Sbjct: 434 HGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHN-ITPKH 492
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
V ++D++ + + +A ++ M + ++W ++++ ++G ++ G F
Sbjct: 493 VHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHG--EIELGEFAAKRL 550
Query: 327 CGIQPN 332
+ P+
Sbjct: 551 LELDPD 556
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 187/413 (45%), Gaps = 46/413 (11%)
Query: 53 HSLIVKAGLDCDEFVKTSLL-NLYVHCGYLAD----ALKVFDDIPDKNVVSWTAIISGYI 107
H+ I+++ LD TSLL L + L+ AL VF+ IP +
Sbjct: 43 HAQILRSKLD----RSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELS 98
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
E+ + ++ R+ +GL D FS +L A +++ L IHG + G + F
Sbjct: 99 RSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPF 158
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
V T LV +YA CG + +AR +FD+M +D+V+WS MI GY +G +AL +F M+ N
Sbjct: 159 VQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYN 218
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM---- 283
++P+ + VLSAC G L G F+ N + +P L + L+ MYA CG M
Sbjct: 219 VEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLAL 278
Query: 284 ---------------------------AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
A VF +M KD V W+A++SG + + +
Sbjct: 279 NLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQE 338
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR--QFFNSMSRVFSLTPMIEHYGC 374
A +F +++ GI+P+ T + ++ C H G +D+ + F + P+
Sbjct: 339 ALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPI---NNA 395
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
++++ + G L+ A + MP N I W +++ +H A +Q+
Sbjct: 396 LIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMHGDAGSALRFFHQM 447
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 136/294 (46%), Gaps = 5/294 (1%)
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLV-DLYAKCGNMEKARRVFDQMPEK 195
+ +A + L+ K +H + + R+ + LV A +++ A VF+ +P+
Sbjct: 26 LFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKP 85
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
+ + ++ + + P++ L ++ M+ + L + ++ +L A + + +L G+
Sbjct: 86 ETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIH 145
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
+ F S+P + T L+ MYA CGR+A+A +F +M +D V W+ ++ G +G
Sbjct: 146 GLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFN 205
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SMSRVFSLTPMIEHYGC 374
A +F +++ ++P+ +L C AG + G+ + M + P ++
Sbjct: 206 DALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQ--SA 263
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+V + G +D A L + M N + A++ G + + A V NQ++
Sbjct: 264 LVTMYASCGSMDLALNLFEKMT-PKNLVASTAMVTGYSKLGQIENARSVFNQMV 316
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/631 (40%), Positives = 385/631 (61%), Gaps = 35/631 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLG-VRSHSLIVKA 59
MI+G+ +C + + Y M P FTFPF+LK ++ + G V + ++
Sbjct: 106 MIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHG 165
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
LD + FV+ ++L+ CG + A K+FD VV+W ++SGY EE+ +F
Sbjct: 166 FLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLF 225
Query: 120 RRLLHRG--LKPDSFSIVRVLTACTQLGDLSTAKWIHG-YVNEAGKGRNVFVATSLVDLY 176
+ + + P+S ++V +L+AC++L DL K I+ Y+ E N+ + +L+D++
Sbjct: 226 IEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMF 285
Query: 177 AKCGNMEKARRVFD-------------------------------QMPEKDIVSWSSMIQ 205
A CG M+ AR VFD QMPE+D VSW++MI
Sbjct: 286 ASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMID 345
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GY KE L +F +MQ N+KP+ +TMV +L+ACA LGALELG WA +++++N+ +
Sbjct: 346 GYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKN 405
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ +G LIDMY KCG + +A K+F EM+ KD+ W A++ GL+ NG+ + A +F +
Sbjct: 406 DTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYML 465
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
+ + P+ T++G++C CTH GLV +G+ FF++M+ + P + HYGCMVDLLGR+G L
Sbjct: 466 EASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHL 525
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
EA E+I +MP++PN+IVWG+LL CR+HK LAE N+++ LEP N YVLL NIY
Sbjct: 526 KEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIY 585
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+A KW + +R MM ++GI+KI GCS +E++G+V+EF+ GD SHP S++IY+KL+ +
Sbjct: 586 AACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMK 645
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
L AG+ P T V D+ EE+K+ L HSEKLA+A+ LI++ IRI KNLR+C
Sbjct: 646 QDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMCV 705
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
DCH ++SK+ RE+IVRD RFH F G
Sbjct: 706 DCHHMAMVVSKVYNRELIVRDKTRFHHFRHG 736
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 190/405 (46%), Gaps = 59/405 (14%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHC-----GYLADALKVFDDIPDKNVVSWTAIISGYI 107
HS +K GL + T ++ + C G + A KVFD+IP +V W +I GY
Sbjct: 55 HSQTIKTGLSSNHLFLTKVI---IFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYS 111
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK------WIHGYVNEAG 161
E +++++ +L +KPD F+ +L T+ L K IHG+++
Sbjct: 112 RINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDS-- 169
Query: 162 KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
N+FV + L++ CG + AR++FD ++V+W+ ++ GY +E+ +F
Sbjct: 170 ---NLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFI 226
Query: 222 NMQR--ENLKPEYYTMVGVLSACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYA 278
M++ E + P T+V +LSAC+ L L G + +++ N +L LIDM+A
Sbjct: 227 EMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFA 286
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLS--------------------------MNG 312
CG M A VF EMK +D + W ++V+G + ++G
Sbjct: 287 SCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDG 346
Query: 313 YVKV-----AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR--QFFNSMSRVFSL 365
Y+++ +F ++ ++P+ T V +L C H G ++ G + + +++ +
Sbjct: 347 YLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKND 406
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
T + ++D+ + G +++A ++ M + + W A++ G
Sbjct: 407 TFI---GNALIDMYFKCGNVEKAKKIFNEM-QKKDKFTWTAMIVG 447
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 147/322 (45%), Gaps = 9/322 (2%)
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
NL ++ + R + + L S + +L C + +++ IH + G N T
Sbjct: 15 NLSLSLFLKRMISNTPLHSFVKSPISLLETCNTMYEINQ---IHSQTIKTGLSSNHLFLT 71
Query: 171 SLVDL--YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
++ + G++ AR+VFD++P+ + W++MI+GY+ + + ++ M N+
Sbjct: 72 KVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNI 131
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFL-SNPVLGTTLIDMYAKCGRMAQAC 287
KP+ +T +L AL+ G + + FL SN + I +++ CG + A
Sbjct: 132 KPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYAR 191
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE-KCG-IQPNGNTFVGLLCGCTH 345
K+F + V WN V+SG + + + +F ++E KC + PN T V +L C+
Sbjct: 192 KIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSK 251
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
+ G+ +N + + P + ++D+ G++D A + M + I W
Sbjct: 252 LKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTR-DVISWT 310
Query: 406 ALLAGCRLHKKTDLAEHVLNQL 427
+++ G + DLA +Q+
Sbjct: 311 SIVTGFANTCRIDLARKYFDQM 332
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/636 (39%), Positives = 372/636 (58%), Gaps = 32/636 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + S+ ++ + M G P + FP VLK+CA D LG H I++ G
Sbjct: 77 VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136
Query: 61 LDCDEFVKTSLLNLYVHCGYLADA--------------------------------LKVF 88
LD D + +L+N+Y +L ++ K+F
Sbjct: 137 LDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIF 196
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+ +P+K++VSW II+G G EE + M R + LKPDSF++ VL + D+S
Sbjct: 197 EMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDIS 256
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K IHG G +++VA+SL+D+YAKC + + RVF + E+D +SW+S+I G
Sbjct: 257 RGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCV 316
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
NG E L F M +KP+ Y+ ++ ACA L L LG ++ RN F N
Sbjct: 317 QNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIF 376
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ ++L+DMYAKCG + A ++F M+ +D V W A++ G +++G A +F Q+E G
Sbjct: 377 IASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG 436
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
I+PN F+ +L C+H GLVDE ++FNSM+R F + P +EHY + DLLGR+G+L+EA
Sbjct: 437 IKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 496
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
++ I M + P +W LL+ CR+H D+AE V N+++ ++P N+G Y+LL+NIYSA+
Sbjct: 497 YDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAA 556
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
+W +AAK R+ M GI+K CSW+EV V+ F+ GD SHP EKI ++ L +
Sbjct: 557 RRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELM 616
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
+ G+VP T V D+EEE+K+Y + HSE+LA+ FG+I T IR+ KNLRVC DCH
Sbjct: 617 EKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCH 676
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A K ISKI GREI+VRDN+RFH F G+CSC D+W
Sbjct: 677 TATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 184/386 (47%), Gaps = 34/386 (8%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y H L D+L++F+ I ++W ++I Y + G +++ F +L GL PD
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA-------- 185
VL +C L DL+ + +HGY+ G +++ +L+++Y+K +E++
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 186 ------------------------RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
R++F+ MPEKD+VSW+++I G A NG +E L M
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
M NLKP+ +T+ VL A + G R ++ + ++LIDMYAKC
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
R+A +C+VF + ++D + WN++++G NG F Q+ I+P +F ++
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C H + G+Q ++R I +VD+ + G + A ++ M + +
Sbjct: 349 ACAHLTTLHLGKQLHGYITR-NGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DM 406
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQL 427
+ W A++ GC LH + A + Q+
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQM 432
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/604 (42%), Positives = 369/604 (61%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V ++ A+E M G P FT LKACA +LG + HS ++K
Sbjct: 183 IIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMD 242
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D F+ L+++Y C + DA VF +P++++++W A+ISG+ EEA ++F
Sbjct: 243 MGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFP 302
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ + ++ VL + L + IH ++G + +V SL+D Y KCG
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCG 362
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A RVF++ P D+V ++S++ YA +G +EAL ++ MQ +KP+ + +L+
Sbjct: 363 HVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLN 422
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL A E G + + F+S+ G +L++MYAKCG + A F + + V
Sbjct: 423 ACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVS 482
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ GL+ +GY K A +F Q+ K G+ PN T V +LC C HAGLV E + +FNSM
Sbjct: 483 WSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMK 542
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+F + PM EHY CM+DLLGR+G+L+ A EL+ MP + NA+VWGALL R+HK DL
Sbjct: 543 ILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLG 602
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E L+ALEP SG +VLL+NIY++ W+ A++R +M D ++K G SW+EV
Sbjct: 603 EQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDK 662
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V+ F+VGD SH S +IY+KLDEL+ LK AG+VP + L D+E EK+ L HSEKL
Sbjct: 663 VYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKL 722
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI T P IR+ KNLR+C DCH +K ISKI REIIVRD NRFH F EGSCSC
Sbjct: 723 AVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSC 782
Query: 601 KDFW 604
++W
Sbjct: 783 GEYW 786
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 175/581 (30%), Positives = 274/581 (47%), Gaps = 61/581 (10%)
Query: 25 GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA 84
G F FP VLKAC D LG + H ++V G D DEFV SL+ LY CG DA
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+FD IPD++VVSW A+ S Y++ EA+++F ++ G++P+ FS+ ++ CT L
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
D + IHGY+ + G + F A +LVD+YAK G +E A VFD++ + DIVSW+++I
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAII 184
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G + + AL++ M + + P +T+ L ACA + ELG S + + +
Sbjct: 185 AGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMG 244
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
S+ LG LIDMY+KC M A VF+ M ++D + WNAV+SG S N + A +F +
Sbjct: 245 SDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLM 304
Query: 325 EKCGIQPNGNTFVGLL-----------CGCTHAGLVDEGRQFFNSM-------------- 359
GI N T +L C HA + G +F N +
Sbjct: 305 HTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHV 364
Query: 360 ---SRVFSLTPMIE--HYGCMVDLLGRSGQLDEAHELIKSMP---MEPNAIVWGALLAGC 411
+RVF +P+++ + +V + GQ +EA L M ++P++ V +LL C
Sbjct: 365 EDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNAC 424
Query: 412 RLHKKTDLAEHVLNQLIA---LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQK 468
+ + V ++ + +GN L N+Y+ DA+ S + +GI
Sbjct: 425 ASLSAYEQGKQVHVHILKFGFMSDIFAGNS--LVNMYAKCGSIEDASCAFSRIPVRGI-- 480
Query: 469 IRGCSWVEVDGVVHEFLVGDNSHPLSEKI--------YSKLDELATKLKAAGFVPTTDH- 519
SW + G + + G + L +++ + L + AG V H
Sbjct: 481 ---VSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHY 537
Query: 520 -----VLFDIEEEEKQYF----LACHSEKLALAFGLITTAP 551
+LF IE ++ Y L + KL A L+ P
Sbjct: 538 FNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMP 578
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 209/430 (48%), Gaps = 14/430 (3%)
Query: 5 FVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCD 64
+V +D A+ ++ M G P F+ ++ C D G + H ++K G D D
Sbjct: 86 YVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSD 145
Query: 65 EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
F +L+++Y G L DA VFD+I ++VSW AII+G + A+ + R +
Sbjct: 146 AFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNK 205
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G+ P+ F++ L AC + + +H + + G + F+ L+D+Y+KC +M+
Sbjct: 206 SGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDD 265
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
AR VF MPE+D+++W+++I G++ N +EA +F M E + T+ VL + A+
Sbjct: 266 ARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAA 325
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
L A + + ++ F + + +LID Y KCG + A +VF E D V++ ++
Sbjct: 326 LQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSL 385
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF------FNS 358
V+ + +G + A ++ +++ GI+P+ LL C ++G+Q F
Sbjct: 386 VTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGF 445
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
MS +F+ ++ Y + G +++A +P+ + W A++ G H
Sbjct: 446 MSDIFAGNSLVNMY-------AKCGSIEDASCAFSRIPVR-GIVSWSAMIGGLAQHGYGK 497
Query: 419 LAEHVLNQLI 428
A + Q++
Sbjct: 498 EALQLFKQML 507
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/604 (41%), Positives = 367/604 (60%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+VSN + ++ + M G T V+ C+ LG H +KA
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + LL++Y G L A++VF+ + +++VVSWT++I+GY EG + ++ +F
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ PD F+I +L AC G L K +H Y+ E ++FV+ +L+D+YAKCG
Sbjct: 342 EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCG 401
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M A VF +M KDIVSW++MI GY+ N P EAL++F MQ N KP TM +L
Sbjct: 402 SMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQY-NSKPNSITMACILP 460
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL ALE G + RN F + + L+DMY KCG + A +F + +KD V
Sbjct: 461 ACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVS 520
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G M+GY A F ++ GI+P+ +F+ +L C+H+GL+DEG FFN M
Sbjct: 521 WTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMR 580
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P EHY C+VDLL R+G L +A++ IK MP+EP+A +WGALL GCR++ LA
Sbjct: 581 NNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLA 640
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V + LEP N+G YVLL+NIY+ + KW + K+R +G +G++K GCSW+E+ G
Sbjct: 641 EKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGK 700
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F+ GD+SHPL+ KI L + T++K G P + L ++ EK+ L HSEK+
Sbjct: 701 VHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKI 760
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFG+++ P +R+ KNLRVCGDCHE K +SK+ R+II+RD+NRFH F +GSCSC
Sbjct: 761 AMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSC 820
Query: 601 KDFW 604
+ W
Sbjct: 821 RGHW 824
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 232/470 (49%), Gaps = 59/470 (12%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD-------- 83
T+ VL+ CA Q G R HS+I ++ D + + L+ +YV CG L +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 84 -----------------------------------------ALKVFDDIPDKNVVSWTAI 102
A K+FD++ D++V+SW ++
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 103 ISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK 162
ISGY++ G E+ +++F ++L G+ D ++V V+ C+ G L + +HGY +A
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282
Query: 163 GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
G+ + + L+D+Y+K GN+ A +VF+ M E+ +VSW+SMI GYA G ++ +F+
Sbjct: 283 GKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHE 342
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M++E + P+ +T+ +L ACA G LE G ++++ N+ S+ + L+DMYAKCG
Sbjct: 343 MEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGS 402
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
M A VF EM+ KD V WN ++ G S N A +F +++ +PN T +L
Sbjct: 403 MGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQY-NSKPNSITMACILPA 461
Query: 343 CTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C ++ G++ + R FSL + + +VD+ + G L A L +P E +
Sbjct: 462 CASLAALERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLARLLFDMIP-EKDL 518
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSASH 449
+ W ++AG +H A N++ +EP +S +Y+ SH
Sbjct: 519 VSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEP---DEVSFISILYACSH 565
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 119/280 (42%), Gaps = 53/280 (18%)
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASS 256
I ++ I + G + A+++ + +L E T VL CA L +++ G S
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELINQSPKPDL--ELRTYCSVLQLCADLKSIQDGRRIHS 125
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCG----------------------------------- 281
++ N+ + VLG+ L+ MY CG
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRE 185
Query: 282 --------------RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
R+ A K+F E+ D+D + WN+++SG NG + +F Q+
Sbjct: 186 SLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLL 245
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI + T V ++ GC++ G++ GR + S + C++D+ +SG L+
Sbjct: 246 GINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKA-SFGKELTLNNCLLDMYSKSGNLNS 304
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
A ++ ++M E + + W +++AG +D++ + +++
Sbjct: 305 AIQVFETMG-ERSVVSWTSMIAGYAREGLSDMSVRLFHEM 343
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/611 (42%), Positives = 365/611 (59%), Gaps = 45/611 (7%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVK--AGLDCDEFVKTSLLNLYVHCGYLADA 84
L NF PF L+ + H+ I+K A L + L+ + + A
Sbjct: 34 LLRNFNSPFELR------------QVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQ 81
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+ + W + + + +AI +F RL + PD+F+ VL AC L
Sbjct: 82 IFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNL 141
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV------ 198
DLS + +HG V + G N+++ +V LYA CG M +AR +F++MP++D+V
Sbjct: 142 LDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMI 201
Query: 199 -------------------------SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
SW+SMI GY G KEA+ +F M+ +K
Sbjct: 202 AQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEV 261
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T+V VL+ACA LGAL+LG+ + R+ F N + TLIDMY KCG + +ACKVF EM
Sbjct: 262 TVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEM 321
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
+++ V W+A++ GL+M+G + A +F + + GI+PNG TF+GLL C+H GL+ EGR
Sbjct: 322 EERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGR 381
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+FF SM+R + + P IEHYGCMVDLL R+G L EAHE I +MPM+PN +VWGALL CR+
Sbjct: 382 RFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRV 441
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
HK ++AE + L+ L+P N G YV+LSNIY+ + +W D A++R M D+ ++K G S
Sbjct: 442 HKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWS 501
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
+ VDGVVHEF+ G+ SHP +E+I+ + +EL +++ G+VP T VL DIEE EK F+
Sbjct: 502 SITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFV 561
Query: 534 ACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF 593
+ HSEKLAL FGL+ T + IRI KNLR+C DCH A KLIS I REI+VRD NRFHCF
Sbjct: 562 SRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCF 621
Query: 594 IEGSCSCKDFW 604
+ SCSC+D+W
Sbjct: 622 NDNSCSCRDYW 632
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 181/355 (50%), Gaps = 42/355 (11%)
Query: 5 FVSNDCFQ---------HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSL 55
FV N C + AI + +R P FT VL+AC D G H +
Sbjct: 94 FVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGV 153
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV------------------ 97
+ K G + +++ +++LY CG + +A +F+ +P ++VV
Sbjct: 154 VEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGA 213
Query: 98 -------------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
SWT++I+GY+ G +EAI++F ++ G+K + ++V VL AC L
Sbjct: 214 YDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADL 273
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
G L IH Y N G RNV ++ +L+D+Y KCG +E+A +VF++M E+ +VSWS+MI
Sbjct: 274 GALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMI 333
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G A +G +EAL +F +M + ++P T +G+L AC+ +G + G + M R+ +
Sbjct: 334 GGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGI 393
Query: 265 SNPVLGT-TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
+ ++D+ ++ G + +A + M K + VVW A++ ++ V++A
Sbjct: 394 IPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 448
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 141/314 (44%), Gaps = 35/314 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V + AI + M G T VL ACA LG+R H + G
Sbjct: 231 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 290
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + +L+++YV CG L +A KVF+++ ++ VVSW+A+I G G EEA+ +F
Sbjct: 291 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 350
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++P+ + + +L AC+ +G +S +GR F + +
Sbjct: 351 DMSQVGIEPNGVTFIGLLHACSHMGLIS-------------EGRRFFASMT--------- 388
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
R + +P+ I + M+ + G EA + NM +KP +L
Sbjct: 389 ------RDYGIIPQ--IEHYGCMVDLLSRAGLLHEAHEFILNMP---MKPNGVVWGALLG 437
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC +E+ A + + L++ L ++YA+ GR +V + MKD+ QV
Sbjct: 438 ACRVHKNVEMAEEAIKHLLELDPLNDGYY-VVLSNIYAEAGRWEDTARVRKFMKDR-QVK 495
Query: 301 WNAVVSGLSMNGYV 314
S ++++G V
Sbjct: 496 KTPGWSSITVDGVV 509
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/606 (40%), Positives = 379/606 (62%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGF-LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+R FV+++ + A++ Y M +P FTFP +LK CA +F++G H +VK
Sbjct: 49 MLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKY 108
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L D +++T+LLN+Y CG L A +F+ + +N V WT++ISGY+ EA+ ++
Sbjct: 109 MLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLY 168
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+++ G PD ++ +++AC +L DL +H ++ E + ++LV++YAKC
Sbjct: 169 KKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKC 228
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGV 238
G+++ AR+VFDQ+ +KD+ +WS++I GY N EAL +F + N++P T++ V
Sbjct: 229 GDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAV 288
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+SACA LG LE G W ++ R + + L +LIDM++KCG + A ++F M KD
Sbjct: 289 ISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDL 348
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ WN++V+GL+++G + A F ++ +QP+ TF+G+L C+HAGLV EG++ F
Sbjct: 349 ISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYE 408
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ ++ + EHYGCMVDLL R+G L EA E I+ MP++P+ +WG++L CR++ +
Sbjct: 409 IEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLE 468
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E L+ LEP N G Y+LLSNIY+ WN+ K+R +M +KGIQK GCS V +D
Sbjct: 469 LGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVID 528
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
+ H FL GD SHP +I L ++ KLK G+V T VL +I++ +K+ ++ HSE
Sbjct: 529 NIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDNKKEESVSQHSE 588
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLAL +GL+ + I I KNLRVC DCH IKL+SKI R+I +RD NRFH F +GSC
Sbjct: 589 KLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSC 648
Query: 599 SCKDFW 604
SC+D+W
Sbjct: 649 SCRDYW 654
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 182/353 (51%), Gaps = 6/353 (1%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK-PDSFSIVRVLTACT 142
A VF +V++W +++ ++N A+ + +L R PD F+ +L C
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
L + K +HG V + ++++ T+L+++YA CG+++ AR +F++M ++ V W+S
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
MI GY N P EAL ++ M+ + P+ TM ++SACA L L +G+ S + +
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
VLG+ L++MYAKCG + A +VF ++ DKD W+A++ G N A +F
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270
Query: 323 QLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ ++PN T + ++ C G ++ GR + ++R + ++D+ +
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT-QKGHSVSLNNSLIDMFSK 329
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH--KKTDLAEHVLNQLIALEP 432
G +D A + SM + + I W +++ G LH + LA+ L Q L+P
Sbjct: 330 CGDIDAAKRIFDSMSYK-DLISWNSMVNGLALHGLGREALAQFHLMQTTDLQP 381
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/604 (40%), Positives = 364/604 (60%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR F F A+ + MR G P + FP VLK+C D + G H IV+ G
Sbjct: 76 VIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+DCD + +L+N+Y + KVF+ +P K+VVS+ +I+GY G E+A+ M R
Sbjct: 136 MDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVR 195
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ LKPD+F++ VL ++ D+ K IHGYV G +V++ +SLVD+YAK
Sbjct: 196 EMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSA 255
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E + RVF + +D +SW+S++ GY NG EAL +F M ++P V+
Sbjct: 256 RIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIP 315
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA L L LG ++ R F N + + L+DMY+KCG + A K+F M D+V
Sbjct: 316 ACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVS 375
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ G +++G+ A +F ++++ G++PN FV +L C+H GLVDE +FNSM+
Sbjct: 376 WTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMT 435
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+V+ L +EHY + DLLGR+G+L+EA++ I M +EP VW LL+ C +HK +LA
Sbjct: 436 KVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELA 495
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V ++ ++ N G YVL+ N+Y+++ +W + AK+R + KG++K CSW+E+
Sbjct: 496 EKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNK 555
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
H F+ GD SHP ++I L + +++ G+V T VL D++EE K+ L HSE+L
Sbjct: 556 THGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERL 615
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFG+I T P IR+ KN+R+C DCH AIK ISKIT REIIVRDN+RFH F GSCSC
Sbjct: 616 AVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSC 675
Query: 601 KDFW 604
D+W
Sbjct: 676 GDYW 679
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 176/345 (51%), Gaps = 4/345 (1%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
++++Y + L +AL VF + V++W ++I + ++ A+ F + G PD
Sbjct: 45 VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPD 104
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
VL +CT + DL + +HG++ G +++ +L+++Y+K ++ R+VF+
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFE 164
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
MP KD+VS++++I GYA +G ++AL M M +LKP+ +T+ VL + +
Sbjct: 165 LMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLK 224
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G ++ R S+ +G++L+DMYAK R+ + +VF + +D + WN++V+G
Sbjct: 225 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQ 284
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-VFSLTPMI 369
NG A +F Q+ ++P F ++ C H + G+Q + R F I
Sbjct: 285 NGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFI 344
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+VD+ + G + A ++ M + + + W A++ G LH
Sbjct: 345 A--SALVDMYSKCGNIQAARKIFDRMNLH-DEVSWTAIIMGHALH 386
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 119/261 (45%), Gaps = 2/261 (0%)
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
A+ ++ +Y + +A VF + +++W S+I+ + AL F M+
Sbjct: 42 ASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGR 101
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
P++ VL +C + L G F+ R + G L++MY+K + K
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRK 161
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF M KD V +N V++G + +G + A + ++ ++P+ T +L +
Sbjct: 162 VFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVD 221
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
V +G++ + R + + +VD+ +S +++++ E + S ++I W +L+
Sbjct: 222 VLKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDS-ERVFSHLYRRDSISWNSLV 279
Query: 409 AGCRLHKKTDLAEHVLNQLIA 429
AG + + + A + Q+++
Sbjct: 280 AGYVQNGRYNEALRLFRQMVS 300
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/635 (40%), Positives = 377/635 (59%), Gaps = 31/635 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ C++ A+ + M G P + T V+ ACA+ D QLG + + I +
Sbjct: 211 LIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELE 270
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + + +L+++Y+ CG + A K+FD+ DKN+V + I+S Y+ +G E + +
Sbjct: 271 LEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLG 330
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G +PD +++ ++AC++L D+S KW HGYV G V +++++Y KCG
Sbjct: 331 EMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCG 390
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNG-----------FP---------------- 213
E A RVFD+M K VSW+S+I G+ NG P
Sbjct: 391 KQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQ 450
Query: 214 ----KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
KEA+++F MQ E + + TMVGV SAC LGAL+L W ++++ + + L
Sbjct: 451 ESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHL 510
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
GT L+DM+A+CG A +VF +M +D W A + ++M G A +F ++ + GI
Sbjct: 511 GTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGI 570
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+P+G FV LL +H GLV++G F SM ++ + P HYGCMVDLLGR+G L EA
Sbjct: 571 KPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEAL 630
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
LI SM MEPN ++WG+LLA CR+HK D+A + ++ L+P +G +VLLSNIY+++
Sbjct: 631 SLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAG 690
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
+W+D AK+R + +KG K+ G S +E++G + EF GD SHP I L E+ +L+
Sbjct: 691 RWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLR 750
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
G+VP +VL D+ E+EK+Y L+ HSEKLA+AF LI+T IR+AKNLR+C DCH
Sbjct: 751 DIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHS 810
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KL+SK REIIVRDNNRFH F +G CSC D+W
Sbjct: 811 FAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 200/359 (55%), Gaps = 4/359 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRGF + AI + + G +P NFTFPFVL AC + G + H IVK G
Sbjct: 110 LIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMG 169
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV+ SL++ Y CG + +VFD + ++NVVSWT++I GY G +EA+++F
Sbjct: 170 FERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFF 229
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++P+S ++V V++AC +L DL + + + E N + +LVD+Y KCG
Sbjct: 230 EMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCG 289
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++KAR++FD+ +K++V +++++ Y G +E L + M + +P+ TM+ +S
Sbjct: 290 AIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVS 349
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+ L + G W ++ RN + +I+MY KCG+ AC+VF M +K +V
Sbjct: 350 ACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVS 409
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN++++G NG ++ A+ +F + + + NT +G L + E + F M
Sbjct: 410 WNSLIAGFVRNGDMESAWKIFSAMPDSDL-VSWNTMIGAL---VQESMFKEAIELFRVM 464
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 173/311 (55%), Gaps = 12/311 (3%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCG------YLADALKVFDDIPDKNVVS----WTAI 102
HS I K GL+ T+L++ G Y AL++F I D ++ ++++
Sbjct: 53 HSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELF--IEDNGIMGTHYMFSSL 110
Query: 103 ISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK 162
I G+ G +AI +FR+L+ G PD+F+ VL+ACT+ L+ +HG + + G
Sbjct: 111 IRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGF 170
Query: 163 GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
R++FV SL+ Y +CG ++ RRVFD+M E+++VSW+S+I GYA G KEA+ +F+
Sbjct: 171 ERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFE 230
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M ++P TMVGV+SACA L L+LG + + E N ++ L+DMY KCG
Sbjct: 231 MVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGA 290
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ +A K+F E DK+ V++N ++S G + V G++ K G +P+ T + +
Sbjct: 291 IDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSA 350
Query: 343 CTHAGLVDEGR 353
C+ V G+
Sbjct: 351 CSELDDVSCGK 361
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 248/586 (42%), Positives = 373/586 (63%), Gaps = 7/586 (1%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M G P NFTFPF++KAC+ F+ G+R H +VK G F+ SL+ +Y C
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
+ +VFD++PDKN VSW+AII + + +E ++FR++L G +P +I+ + A
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM-A 119
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
C + + A ++ V E G + V ++ ++A+CG +E AR++FD + KD+V+W
Sbjct: 120 CVRSHE--EADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
++ I+ Y P EAL + M + + P+ T++GV+ AC++L + +L +
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITT 237
Query: 261 NEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
F N +L T LID+Y KCG + A KVF M++++ + W+A++SG M+G+ + A
Sbjct: 238 G-FFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREAL 296
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
+F Q+ K ++P+ TFV +L C+H+GLV EG + FNSM+R F +TP EHY CMVD+
Sbjct: 297 NLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDI 355
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNY 438
LGR+G+LDEA + I+ MP+ PNA VWGALL CR+H DLAE V L L+P N+G Y
Sbjct: 356 LGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRY 415
Query: 439 VLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIY 498
V+L NIY+ + K +A IR++M ++G++KI G S +E+ ++ F+ GD SHP ++ IY
Sbjct: 416 VILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIY 475
Query: 499 SKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIA 558
S+L+ L +++ G+ P + VL D++EE K+ L HSEKLA+ FGL+ P VIRI
Sbjct: 476 SELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIR 535
Query: 559 KNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLRVCGDCH A K ISK+TGREI+VRD +RFH F G+CSC+D+W
Sbjct: 536 KNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 8/208 (3%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
I +V D A+ M +G P T V++AC+ FQL H I+ G
Sbjct: 181 IEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTGF 239
Query: 62 DCDEF--VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
++ V+T+L++LYV CG L A KVFD + ++N+++W+A+ISGY G EA+N+F
Sbjct: 240 FYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF 299
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW--IHGYVNEAGKGRNVFVATSLVDLYA 177
+ + +KPD + V +L+AC+ G L W + + G +VD+
Sbjct: 300 DQ-MKASVKPDHITFVSILSACSHSG-LVAEGWECFNSMARDFGVTPRPEHYACMVDILG 357
Query: 178 KCGNMEKARRVFDQMPEK-DIVSWSSMI 204
+ G +++A ++MP + + W +++
Sbjct: 358 RAGKLDEACDFIERMPVRPNAAVWGALL 385
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/606 (40%), Positives = 379/606 (62%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGF-LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+R FV+++ + A++ Y M +P FTFP +LK CA +F++G H +VK
Sbjct: 49 MLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKY 108
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L D +++T+LLN+Y CG L A +F+ + +N V WT++ISGY+ EA+ ++
Sbjct: 109 MLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLY 168
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+++ G PD ++ +++AC +L DL +H ++ E + ++LV++YAKC
Sbjct: 169 KKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKC 228
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGV 238
G+++ AR+VFD++ +KD+ +WS++I GY N EAL +F + N++P T++ V
Sbjct: 229 GDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAV 288
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+SACA LG LE G W ++ R + + L +LIDM++KCG + A ++F M KD
Sbjct: 289 ISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDL 348
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ WN++V+G +++G + A F ++ +QP+ TF+G+L C+HAGLV EG++ F
Sbjct: 349 ISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYE 408
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ ++ + EHYGCMVDLL R+G L EA E I+ MP++P+ +WG++L CR++ +
Sbjct: 409 IEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLE 468
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E L+ LEP N G Y+LLSNIY+ WN+ K+R +M +KGIQK GCS V +D
Sbjct: 469 LGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVID 528
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
+ H FL GD SHP +I L ++ KLK AG+V T VL +I++ +K+ ++ HSE
Sbjct: 529 NIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEESVSQHSE 588
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLAL +GL+ + I I KNLRVC DCH IKL+SKI R+I +RD NRFH F +GSC
Sbjct: 589 KLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSC 648
Query: 599 SCKDFW 604
SC+D+W
Sbjct: 649 SCRDYW 654
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 183/353 (51%), Gaps = 6/353 (1%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK-PDSFSIVRVLTACT 142
A VF + +V++W +++ ++N A+ + +L R PD F+ +L C
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
L + K +HG V + ++++ T+L+++YA CG+++ AR +F++M ++ V W+S
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
MI GY N P EAL ++ M+ + P+ TM ++SACA L L +G+ S + +
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
VLG+ L++MYAKCG + A +VF ++ DKD W+A++ G N A +F
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270
Query: 323 QLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ ++PN T + ++ C G ++ GR + ++R + ++D+ +
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT-QKGHSVSLNNSLIDMFSK 329
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH--KKTDLAEHVLNQLIALEP 432
G +D A + SM + + I W +++ G LH + LA+ L Q L+P
Sbjct: 330 CGDIDAAKRIFDSMSYK-DLISWNSMVNGFALHGLGREALAQFRLMQTTDLQP 381
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 256/604 (42%), Positives = 367/604 (60%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G V N A+EF+ M T + ACA LG H VKA
Sbjct: 625 MISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKAC 684
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +LL++Y CG L DA++ F+ + K VVSWT++I+ Y+ EG ++AI +F
Sbjct: 685 FSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFY 744
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +G+ PD +S+ VL AC L + +H Y+ + + V+ +L+D+YAKCG
Sbjct: 745 EMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCG 804
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ME+A VF Q+P KDIVSW++MI GY+ N P EAL +F MQ+E+ +P+ TM +L
Sbjct: 805 SMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLP 863
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC SL ALE+G + RN + S + LIDMY KCG + A +F + +KD +
Sbjct: 864 ACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLIT 923
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++SG M+G A F ++ GI+P+ TF +L C+H+GL++EG FFNSM
Sbjct: 924 WTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMI 983
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++ P +EHY CMVDLL R+G L +A+ LI++MP++P+A +WGALL GCR+H +LA
Sbjct: 984 SECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELA 1043
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V + LEP N+G YVLL+NIY+ + KW + K+R +G +G++K GCSW+EV G
Sbjct: 1044 EKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGK 1103
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
F+ D +HP ++ I+S L+ L K+K G P + L + + EK+ L HSEKL
Sbjct: 1104 FTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKL 1163
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFG++ IR+AKNLRVC DCHE K +SK T REII+RD+NRFH F +G CSC
Sbjct: 1164 AMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSC 1223
Query: 601 KDFW 604
+DFW
Sbjct: 1224 RDFW 1227
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 206/404 (50%), Gaps = 3/404 (0%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
++ +I + M+ G ++TF +LK A R H + K G V S
Sbjct: 534 YRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNS 593
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ Y G + A K+FD++ D++VVSW ++ISG + G A+ F ++L + D
Sbjct: 594 LIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVD 653
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
++V + AC +G LS + +HG +A R V +L+D+Y+KCGN+ A + F+
Sbjct: 654 LATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFE 713
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M +K +VSW+S+I Y G +A+ +FY M+ + + P+ Y+M VL ACA +L+
Sbjct: 714 KMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDK 773
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G +++ +N + L+DMYAKCG M +A VF ++ KD V WN ++ G S
Sbjct: 774 GRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSK 833
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
N A +F +++K +P+G T LL C ++ GR + R + +
Sbjct: 834 NSLPNEALKLFAEMQK-ESRPDGITMACLLPACGSLAALEIGRGIHGCILR-NGYSSELH 891
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++D+ + G L A L +P E + I W +++GC +H
Sbjct: 892 VANALIDMYVKCGSLVHARLLFDMIP-EKDLITWTVMISGCGMH 934
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 202/401 (50%), Gaps = 5/401 (1%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
++A+E M + L N + +L+ CA Q G HS+I G+ + +
Sbjct: 434 LRNAVELLR-MSQKSELDLN-AYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAK 491
Query: 71 LLNLYVHCGYLADALKVFDDI-PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
L+ +YV CG L + ++FD I D V W ++S Y G+ E+I +F+++ G+
Sbjct: 492 LVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITG 551
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
+S++ +L LG + K IHG V + G G V SL+ Y K G ++ A ++F
Sbjct: 552 NSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLF 611
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D++ ++D+VSW+SMI G NGF AL+ F M + + T+V ++ACA++G+L
Sbjct: 612 DELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLS 671
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
LG + F + TL+DMY+KCG + A + F +M K V W ++++
Sbjct: 672 LGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYV 731
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
G A +F ++E G+ P+ + +L C +D+GR N + R ++ +
Sbjct: 732 REGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYI-RKNNMALCL 790
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++D+ + G ++EA+ + +P++ + + W ++ G
Sbjct: 791 PVSNALMDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMIGG 830
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/638 (40%), Positives = 384/638 (60%), Gaps = 34/638 (5%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRG+ S+ D Q + F + + + P FTFPF+ KA +R LG H +++KA
Sbjct: 143 LIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKA 202
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L D F+ SL+N Y G A +VF ++P K+VVSW A+I+ + G ++A+ +F
Sbjct: 203 SLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLF 262
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ + + +KP+ ++V VL+AC + DL +WI Y+ G ++ + +++D+Y KC
Sbjct: 263 QEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKC 322
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQG-------------------------------YA 208
G + A+ +F++M EKDIVSW++M+ G Y
Sbjct: 323 GCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYE 382
Query: 209 SNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
NG P+ AL +F+ MQ ++ KP+ T++ L A A LGA++ G W ++++++ N
Sbjct: 383 QNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNC 442
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+L+DMYAKCG + +A +VF ++ KD VW+A++ L+M G K A +F + +
Sbjct: 443 HLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEA 502
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
I+PN TF +LC C HAGLV+EG Q F M ++ + P I+HY C+VD+ GR+G L++
Sbjct: 503 YIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEK 562
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A I+ MP+ P A VWGALL C H +LAE L+ LEP N G +VLLSNIY+
Sbjct: 563 AASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAK 622
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ W + +R +M D ++K CS ++V+G+VHEFLVGDNSHP S+KIYSKLDE++ K
Sbjct: 623 AGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEK 682
Query: 508 LKAAGFVPTTDHVLFDIEEEE-KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
K G+ P ++L EE+ + L HSEKLA+AFGLI+TA IRI KN+R+CGD
Sbjct: 683 FKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGD 742
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CH KL+S++ R+I++RD RFH F G CSC D+W
Sbjct: 743 CHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 204/430 (47%), Gaps = 39/430 (9%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ +++ CD + + LL Y C L A VF+ IP N+ W +I GY +
Sbjct: 92 HAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSS 151
Query: 111 NLEEAINMFRRLLHRGLK-PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+ ++ +F +LH + P+ F+ + A ++L L +HG V +A ++F+
Sbjct: 152 DPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFIL 211
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
SL++ Y G + A RVF MP KD+VSW++MI +A G P +AL +F M+ +++K
Sbjct: 212 NSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVK 271
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P TMV VLSACA LE G W S++E N F + +L ++DMY KCG + A +
Sbjct: 272 PNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDL 331
Query: 290 FREMKDKDQV-------------------------------VWNAVVSGLSMNGYVKVAF 318
F +M +KD V WNA++S NG +VA
Sbjct: 332 FNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVAL 391
Query: 319 GVFGQLEKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
+F +++ +P+ T + LC G +D G + + + + ++D
Sbjct: 392 SLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFG-HWIHVYIKKHDINLNCHLATSLLD 450
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGN 437
+ + G L++A E+ ++ + + VW A++ ++ + A + + + LE + N
Sbjct: 451 MYAKCGNLNKAMEVFHAVERK-DVYVWSAMIGALAMYGQGKAALDLFSSM--LEAYIKPN 507
Query: 438 YVLLSNIYSA 447
V +NI A
Sbjct: 508 AVTFTNILCA 517
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 150/341 (43%), Gaps = 47/341 (13%)
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA--KCGNM 182
+G + +S +I+ + CT L K IH ++ + + + A+ L+ YA C +
Sbjct: 66 KGNEVESTNILEFIDQCTNTMQL---KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCL 122
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK-PEYYTMVGVLSA 241
A+ VF+Q+P+ ++ W+++I+GYAS+ P ++ +F +M + P +T + A
Sbjct: 123 IYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKA 182
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
+ L L LG + + S+ + +LI+ Y G A +VF M KD V W
Sbjct: 183 ASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSW 242
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC------------------ 343
NA+++ ++ G A +F ++E ++PN T V +L C
Sbjct: 243 NAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIEN 302
Query: 344 -----------------THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLD 386
G +++ + FN MS I + M+D + G D
Sbjct: 303 NGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSE-----KDIVSWTTMLDGHAKLGNYD 357
Query: 387 EAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
EAH + +MP + A W AL++ + K +A + +++
Sbjct: 358 EAHCIFDAMPHKWTA-AWNALISAYEQNGKPRVALSLFHEM 397
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/605 (40%), Positives = 377/605 (62%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+VSN + + + M G T V CA LG HS+ VKA
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ +LL++Y CG L A VF ++ D++VVS+T++I+GY EG EA+ +F
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ PD +++ VL C + L K +H ++ E G ++FV+ +L+D+YAKCG
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF-YNMQRENLKPEYYTMVGVL 239
+M++A VF +M KDI+SW+++I GY+ N + EAL +F ++ + P+ T+ VL
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACASL A + G ++ RN + S+ + +L+DMYAKCG + A +F ++ KD V
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W +++G M+G+ K A +F Q+ + GI+ + +FV LL C+H+GLVDEG +FFN M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ P +EHY C+VD+L R+G L +A+ I++MP+ P+A +WGALL GCR+H L
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE V ++ LEP N+G YVL++NIY+ + KW ++R +G +G++K GCSW+E+ G
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 746
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V+ F+ GD+S+P +E I + L ++ ++ G+ P T + L D EE EK+ L HSEK
Sbjct: 747 RVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEK 806
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A G+I++ +IR+ KNLRVCGDCHE K +SK+T REI++RD+NRFH F +G CS
Sbjct: 807 LAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 866
Query: 600 CKDFW 604
C+ FW
Sbjct: 867 CRGFW 871
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 215/419 (51%), Gaps = 5/419 (1%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
F +I + M + G ++TF V K+ + G + H I+K+G V S
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ Y+ + A KVFD++ +++V+SW +II+GY++ G E+ +++F ++L G++ D
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+IV V C +S + +H +A R +L+D+Y+KCG+++ A+ VF
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M ++ +VS++SMI GYA G EA+ +F M+ E + P+ YT+ VL+ CA L+
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G +++ N+ + + L+DMYAKCG M +A VF EM+ KD + WN ++ G S
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 311 NGYVKVAFGVFG-QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
N Y A +F LE+ P+ T +L C D+GR+ + R +
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD-- 533
Query: 370 EHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
H +VD+ + G L AH L + + + W ++AG +H A + NQ+
Sbjct: 534 RHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 194/379 (51%), Gaps = 2/379 (0%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T VL+ CA + G + I G D + + L +Y +CG L +A +VFD++
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
+ + W +++ G+ +I +F++++ G++ DS++ V + + L + +
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+HG++ ++G G V SLV Y K ++ AR+VFD+M E+D++SW+S+I GY SNG
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
++ L +F M ++ + T+V V + CA + LG S + F
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
TL+DMY+KCG + A VFREM D+ V + ++++G + G A +F ++E+ GI P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ T +L C L+DEG++ + + L I ++D+ + G + EA EL
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQEA-EL 453
Query: 392 IKSMPMEPNAIVWGALLAG 410
+ S + I W ++ G
Sbjct: 454 VFSEMRVKDIISWNTIIGG 472
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 149/318 (46%), Gaps = 4/318 (1%)
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
D++V + + GNLE A+ + + D ++ VL C L K
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+ ++ G + + + L +Y CG++++A RVFD++ + + W+ ++ A +G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
++ +F M ++ + YT V + +SL ++ G F+ ++ F +G +
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+ Y K R+ A KVF EM ++D + WN++++G NG + VF Q+ GI+ +
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
T V + GC + L+ GR +S+ + ++D+ + G LD A +
Sbjct: 296 LATIVSVFAGCADSRLISLGRA-VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 393 KSMPMEPNAIVWGALLAG 410
+ M + + + + +++AG
Sbjct: 355 REMS-DRSVVSYTSMIAG 371
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/604 (42%), Positives = 366/604 (60%), Gaps = 33/604 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR +V+N + A+ + +M G P ++T+P VLKA + D +G++ H+ +V+ G
Sbjct: 1097 MIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVG 1156
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + FV L+++Y CG L +A +V D++P ++VVSW ++++G G ++A+ + +
Sbjct: 1157 LDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCK 1216
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GLKPD+ ++ +L A V + +D
Sbjct: 1217 EMELLGLKPDAGTMASLLPA---------------------------VTNTCLD------ 1243
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ + +F ++ K +VSW+ MI Y +N P EA+D+F M+ + P+ ++ VL
Sbjct: 1244 NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLP 1303
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC L AL LG ++ R N +L LIDMYAKCG + A +VF +MK +D V
Sbjct: 1304 ACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVS 1363
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++S MNG + A +F +++ G+ P+ FV +L C+HAGL+DEGR +F M+
Sbjct: 1364 WTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMT 1423
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P IEH+ CMVDLLGR+GQ+DEA+ IK MPMEPN VWGALL+ CR++ +
Sbjct: 1424 EECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIG 1483
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+QL L P SG YVLLSNIY+ + +W D +RS+M KGI+K+ G S E+D
Sbjct: 1484 LLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNR 1543
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL GD SHP S++IY +LD L K+K AG+VP TD L D+EEE+K+ LA HSEKL
Sbjct: 1544 VHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKL 1603
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF ++ TAP IRI KNLRVCGDCH A KLISKI GREI +RD NRFH F G CSC
Sbjct: 1604 AIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSC 1663
Query: 601 KDFW 604
D+W
Sbjct: 1664 GDYW 1667
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 170/379 (44%), Gaps = 36/379 (9%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ Y CG +FD+IP KNVV + +I Y+N +A+ +F+ + G+ PD
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
++ VL A + DL IH V G NVFV L+ +Y KCG + +A RV D
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
ZMP +D+VSW+S++ G A NG +AL++ M+ LKP+ TM +L
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLL----------- 1234
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
P + T +D + M F ++ +K V WN +++
Sbjct: 1235 ----------------PAVTNTCLDNVSFVKEM------FMKLANKSLVSWNVMIAVYMN 1272
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
N A +F Q+E + P+ + +L C + GR+ + R L P +
Sbjct: 1273 NSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRK-RLQPNLL 1331
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
++D+ + G L+ A E+ M + + W ++++ ++ K A + +++ L
Sbjct: 1332 LENALIDMYAKCGCLEYAREVFDQMKFR-DVVSWTSMISAYGMNGKGRDAVSLFSRMQDL 1390
Query: 431 EPWNSGNYVLLSNIYSASH 449
N + +S + + SH
Sbjct: 1391 G-LNPDSIAFVSVLSACSH 1408
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 6/250 (2%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
N + L+ YA CG R +FD++P+K++V ++ MI+ Y +N +AL +F NM
Sbjct: 1059 NPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMA 1118
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
+ P++YT VL A + L +G+ + + R N +G LI MY KCG +
Sbjct: 1119 GHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLV 1178
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
+AC+V ZM +D V WN++V+G + NG A V ++E G++P+ T LL T
Sbjct: 1179 EACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVT 1238
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM---PMEPNA 401
+ L + F M + ++ + M+ + + EA ++ M ++P+A
Sbjct: 1239 NTCL--DNVSFVKEMFMKLANKSLVS-WNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDA 1295
Query: 402 IVWGALLAGC 411
I ++L C
Sbjct: 1296 ISIASVLPAC 1305
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
++ SNP LG L+ YA CG +F E+ K+ V +N ++ N A V
Sbjct: 1054 HDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLV 1113
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F + GI P+ T+ +L + + + G Q ++ RV L + ++ + G
Sbjct: 1114 FKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRV-GLDLNVFVGNGLISMYG 1172
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN--QLIALEP 432
+ G L EA ++ MP + + W +L+AGC + + D A V +L+ L+P
Sbjct: 1173 KCGCLVEACRVLDZMPCR-DVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKP 1225
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/602 (41%), Positives = 365/602 (60%), Gaps = 50/602 (8%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
HS +K G+ C+ ++ +L+ G + A ++FD IP+ +V SW + GY
Sbjct: 34 HSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIA 93
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+ ++++ +L R +KPD ++ + T+ L + +H +V + G NVF
Sbjct: 94 CPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHN 153
Query: 171 SLVDLYAKCGNMEKARRVFD---------------------------------------- 190
+L+++Y+ CG ++ AR +FD
Sbjct: 154 ALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQV 213
Query: 191 --------QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
+MPE+D VSW++MI GY KEAL +F MQ +KP+ +TMV VL+AC
Sbjct: 214 DAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTAC 273
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
A LGALELG W +++++N+ ++ +G LIDMY KCG + A +F + +D+ W
Sbjct: 274 AQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWT 333
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
A+V GL++NG + A +F Q+ K + P+ T+VG+L CTH G+VDEG++FF SM+
Sbjct: 334 AMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTAR 393
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ P I HYGCMVDLLG++G L EAHE+IK+MPM+PN+IVWGALL CR+HK ++AE
Sbjct: 394 HGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAER 453
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
+ Q++ LEP N YVL NIY+A +KW+ ++R +M D+GI+K GCS +E++G+VH
Sbjct: 454 AIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVH 513
Query: 483 EFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
EF+ GD SHP +++IY KL+++ + LK AG+ P T V DI EE+K+ + HSEKLA+
Sbjct: 514 EFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAI 573
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
AFGLI + P IRI KNLR+C DCH KL+SK+ RE+IVRD RFH F GSCSCKD
Sbjct: 574 AFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKD 633
Query: 603 FW 604
+W
Sbjct: 634 YW 635
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/605 (40%), Positives = 377/605 (62%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+VSN + + + M G T V CA LG HS+ VKA
Sbjct: 116 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 175
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ +LL++Y CG L A VF ++ D++VVS+T++I+GY EG EA+ +F
Sbjct: 176 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 235
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ PD +++ VL C + L K +H ++ E G ++FV+ +L+D+YAKCG
Sbjct: 236 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 295
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF-YNMQRENLKPEYYTMVGVL 239
+M++A VF +M KDI+SW+++I GY+ N + EAL +F ++ + P+ T+ VL
Sbjct: 296 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 355
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACASL A + G ++ RN + S+ + +L+DMYAKCG + A +F ++ KD V
Sbjct: 356 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 415
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W +++G M+G+ K A +F Q+ + GI+ + +FV LL C+H+GLVDEG +FFN M
Sbjct: 416 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 475
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ P +EHY C+VD+L R+G L +A+ I++MP+ P+A +WGALL GCR+H L
Sbjct: 476 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 535
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE V ++ LEP N+G YVL++NIY+ + KW ++R +G +G++K GCSW+E+ G
Sbjct: 536 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 595
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V+ F+ GD+S+P +E I + L ++ ++ G+ P T + L D EE EK+ L HSEK
Sbjct: 596 RVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEK 655
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A G+I++ +IR+ KNLRVCGDCHE K +SK+T REI++RD+NRFH F +G CS
Sbjct: 656 LAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 715
Query: 600 CKDFW 604
C+ FW
Sbjct: 716 CRGFW 720
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 216/420 (51%), Gaps = 7/420 (1%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
F +I + M + G ++TF V K+ + G + H I+K+G V S
Sbjct: 25 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 84
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ Y+ + A KVFD++ +++V+SW +II+GY++ G E+ +++F ++L G++ D
Sbjct: 85 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 144
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+IV V C +S + +H +A R +L+D+Y+KCG+++ A+ VF
Sbjct: 145 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 204
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M ++ +VS++SMI GYA G EA+ +F M+ E + P+ YT+ VL+ CA L+
Sbjct: 205 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 264
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G +++ N+ + + L+DMYAKCG M +A VF EM+ KD + WN ++ G S
Sbjct: 265 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 324
Query: 311 NGYVKVAFGVFG-QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR--VFSLTP 367
N Y A +F LE+ P+ T +L C D+GR+ + R FS
Sbjct: 325 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 384
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ +VD+ + G L AH L + + + W ++AG +H A + NQ+
Sbjct: 385 VANS---LVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQM 440
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 169/323 (52%), Gaps = 2/323 (0%)
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD++ + + W +++ G+ +I +F++++ G++ DS++ V + + L +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ +HG++ ++G G V SLV Y K ++ AR+VFD+M E+D++SW+S+I GY
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
SNG ++ L +F M ++ + T+V V + CA + LG S + F
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
TL+DMY+KCG + A VFREM D+ V + ++++G + G A +F ++E+
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI P+ T +L C L+DEG++ + + L I ++D+ + G + E
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQE 299
Query: 388 AHELIKSMPMEPNAIVWGALLAG 410
A EL+ S + I W ++ G
Sbjct: 300 A-ELVFSEMRVKDIISWNTIIGG 321
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 253/566 (44%), Positives = 356/566 (62%), Gaps = 31/566 (5%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
S++ L G + +A K+F+++ +K++VSW+A+ISGY G EEA+ MF + G++
Sbjct: 243 SMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRL 302
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA------------ 177
D +V VL+AC L + T K IHG V G V + +L+ +Y+
Sbjct: 303 DEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLF 362
Query: 178 -------------------KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALD 218
KCG++EKAR +FD MPEKDIVSWS++I GYA + E L
Sbjct: 363 NGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLA 422
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
+F+ MQ ++P+ +V V+SAC L AL+ G W +++ +N N +LGTTL+DMY
Sbjct: 423 LFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYM 482
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
KCG + A +VF M++K WNA++ GL++NG V+ + +F +++ G+ PN TF+G
Sbjct: 483 KCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMG 542
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
+L C H GLVDEGR F SM + P ++HYGCMVDLLGR+G L+EA +LI+SMPM
Sbjct: 543 VLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMA 602
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIR 458
P+ WGALL C+ H T++ E V +LI L+P + G +VLLSNI+++ W D ++R
Sbjct: 603 PDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVR 662
Query: 459 SMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTD 518
MM +G+ K GCS +E +GVVHEFL GD +HP K+ L+E+A +LK G+ P T+
Sbjct: 663 GMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTN 722
Query: 519 HVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKIT 578
V DI+EEEK+ L HSEKLA+AFGL+T +P IRI KNLR+C DCH A KLISK
Sbjct: 723 EVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAY 782
Query: 579 GREIIVRDNNRFHCFIEGSCSCKDFW 604
REI+VRD +RFH F EG+CSC D+W
Sbjct: 783 AREIVVRDRHRFHYFKEGACSCMDYW 808
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 206/442 (46%), Gaps = 74/442 (16%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACA-REHDFQLGVRSHSLIVKA 59
M+R ++ ++ + A+ Y M P N+T+P V++ACA R +F G H ++K
Sbjct: 112 MMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFG-GKEIHDHVLKV 170
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D D +V+ +L+N+Y CG + DA K+FD+ P + VSW +I++GY+ +
Sbjct: 171 GFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKK---------- 220
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
GD+ AK I + + RN+ + S++ L K
Sbjct: 221 -------------------------GDVEEAKLIFDQMPQ----RNIVASNSMIVLLGKM 251
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + +A ++F++M EKD+VSWS++I GY NG +EAL MF M ++ + +V VL
Sbjct: 252 GQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVL 311
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA--------------------- 278
SACA L ++ G + R S L LI MY+
Sbjct: 312 SACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQI 371
Query: 279 ----------KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
KCG + +A +F M +KD V W+AV+SG + + +F +++
Sbjct: 372 SWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQ 431
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
I+P+ V ++ CTH +D+G+ + ++ R L + ++D+ + G ++ A
Sbjct: 432 IRPDETILVSVISACTHLAALDQGK-WVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENA 490
Query: 389 HELIKSMPMEPNAIVWGALLAG 410
E+ M E W AL+ G
Sbjct: 491 LEVFNGME-EKGVSSWNALIIG 511
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 181/373 (48%), Gaps = 35/373 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N ++ A+ + M G VL ACA + G H L+++ G
Sbjct: 275 LISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMG 334
Query: 61 LDCDEFVKTSLLNLY-------------------------------VHCGYLADALKVFD 89
++ ++ +L+++Y + CG + A +FD
Sbjct: 335 IESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFD 394
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+P+K++VSW+A+ISGY E + +F + ++PD +V V++ACT L L
Sbjct: 395 VMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQ 454
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
KW+H Y+ + G NV + T+L+D+Y KCG +E A VF+ M EK + SW+++I G A
Sbjct: 455 GKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAV 514
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG-VWASSFMERNEFLSNPV 268
NG + +LDMF M+ + P T +GVL AC +G ++ G +S +E++ N
Sbjct: 515 NGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVK 574
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
++D+ + G + +A K+ M D W A++ +G ++ V +L +
Sbjct: 575 HYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIE- 633
Query: 328 GIQPNGNTFVGLL 340
+QP+ + F LL
Sbjct: 634 -LQPDHDGFHVLL 645
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 172/370 (46%), Gaps = 43/370 (11%)
Query: 44 HDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDKNVVSWTA 101
H+ + R S ++ G D F + LL + L +L++FD I + N W
Sbjct: 52 HNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNT 111
Query: 102 IISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG 161
++ YI + E+A+ +++ ++ + PD+++ V+ AC K IH +V + G
Sbjct: 112 MMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVG 171
Query: 162 KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
+V+V +L+++YA CGNM AR++FD+ P D VSW+S++ GY G +EA +F
Sbjct: 172 FDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFD 231
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
M + N+ V ++I + K G
Sbjct: 232 QMPQRNI---------------------------------------VASNSMIVLLGKMG 252
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
++ +A K+F EM +KD V W+A++SG NG + A +F ++ G++ + V +L
Sbjct: 253 QVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLS 312
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C H +V G+ + R+ + + ++ + SG++ +A +L +
Sbjct: 313 ACAHLSIVKTGKMIHGLVIRM-GIESYVNLQNALIHMYSGSGEIMDAQKLFNG-SHNLDQ 370
Query: 402 IVWGALLAGC 411
I W ++++GC
Sbjct: 371 ISWNSMISGC 380
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/621 (41%), Positives = 374/621 (60%), Gaps = 17/621 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+ + S+ + +NSMR+ P FP +LKA +L H+ V+ G
Sbjct: 81 IIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLG 140
Query: 61 LDCDEFVKTSLLNLYV---HCGYLADAL------------KVFDDIPDKNVVSWTAIISG 105
LD D ++ +L+N Y + G + D KVFD +P ++VVSW +I+G
Sbjct: 141 LDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAG 200
Query: 106 YINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR 164
+ G EA++M R + G LKPDSF++ +L + D++ K IHGY G
Sbjct: 201 FAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDG 260
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+VF+ +SL+D+YAKC +E + R F +P KD +SW+S+I G NG L F M
Sbjct: 261 DVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRML 320
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
+EN+KP + V+ ACA L AL LG + R F N + ++L+DMYAKCG +
Sbjct: 321 KENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIK 380
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A VF + +D V W A++ G +M+G+ A +F + + G++P F+ +L C+
Sbjct: 381 MARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACS 440
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP-MEPNAIV 403
HAGLVDEG ++FNSM R F + P +EHY + DLLGR+G+L+EA++ I +M ++P V
Sbjct: 441 HAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSV 500
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGD 463
W LLA CR HK +LAE VL++L++++ N G YVL+SNIYSA+ +W DAA++R M
Sbjct: 501 WSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRK 560
Query: 464 KGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
KG++K CSW+EV VH F+ GD SHP +KI LD L +++ G+V T+ VL D
Sbjct: 561 KGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHD 620
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
++EE K+ L HSE+LA+A+G+I+T IR+ KN+RVC DCH AIK I+KI GREI
Sbjct: 621 VDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVGREIT 680
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
VRDN+RFH F GSCSC D+W
Sbjct: 681 VRDNSRFHHFKNGSCSCGDYW 701
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 104/230 (45%), Gaps = 20/230 (8%)
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG--VWASS 256
+WSS+I+ Y S+ + F +M+ ++ P + +L A L +L + A +
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 257 F---MERNEFLSNPVLGT--------TLIDMYAKCGRMAQAC--KVFREMKDKDQVVWNA 303
++ + +++N ++ T + D++ K G C KVF M +D V WN
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
V++G + NG A + ++ K G ++P+ T +L V++G++ R
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256
Query: 363 -FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
F I ++D+ + +L+ + +P +AI W +++AGC
Sbjct: 257 GFDGDVFIG--SSLIDMYAKCNRLECSLRAFYILP-RKDAISWNSIIAGC 303
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/604 (42%), Positives = 363/604 (60%), Gaps = 33/604 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR +V+N + A+ + +M G P ++T+P VLKA + D +G++ H+ +V+ G
Sbjct: 108 MIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVG 167
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + FV L+++Y CG L +A +V D +P ++VVSW ++++G G ++A+ + +
Sbjct: 168 LDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCK 227
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GLKPD+ ++ +L A T T L
Sbjct: 228 EMELLGLKPDAGTMASLLPAVTN--------------------------TCL-------D 254
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ + +F ++ K +VSW+ MI Y +N P EA+D+F M+ + P+ ++ VL
Sbjct: 255 NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLP 314
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC L AL LG ++ R N +L LIDMYAKCG + A +VF +MK +D V
Sbjct: 315 ACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVS 374
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++S MNG + A +F +++ G+ P+ FV +L C+HAGL+DEGR +F M+
Sbjct: 375 WTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMT 434
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P IEH+ CMVDLLGR+GQ+DEA+ IK MPMEPN VWGALL+ CR++ +
Sbjct: 435 EECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIG 494
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+QL L P SG YVLLSNIY+ + +W D +RS+M KGI+K+ G S E+D
Sbjct: 495 LLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNR 554
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL GD SHP S++IY +LD K+K AG+VP TD L D+EEE+K+ LA HSEKL
Sbjct: 555 VHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKL 614
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF ++ TAP IRI KNLRVCGDCH A KLISKI GREI +RD NRFH F G CSC
Sbjct: 615 AIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSC 674
Query: 601 KDFW 604
D+W
Sbjct: 675 GDYW 678
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 181/409 (44%), Gaps = 37/409 (9%)
Query: 42 REHDFQLGVRSHSLI-VKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWT 100
+ D + + HS I + L + + L+ Y CG +FD+IP KNVV +
Sbjct: 47 KNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFN 106
Query: 101 AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
+I Y+N +A+ +F+ + G+ PD ++ VL A + DL IH V
Sbjct: 107 VMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRV 166
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
G NVFV L+ +Y KCG + +A RV DQMP +D+VSW+S++ G A NG +AL++
Sbjct: 167 GLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVC 226
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
M+ LKP+ TM +L P + T +D +
Sbjct: 227 KEMELLGLKPDAGTMASLL---------------------------PAVTNTCLDNVSFV 259
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
M F ++ +K V WN +++ N A +F Q+E + P+ + +L
Sbjct: 260 KEM------FMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVL 313
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C + GR+ + R L P + ++D+ + G L+ A E+ M +
Sbjct: 314 PACGDLSALLLGRRIHEYVVRK-RLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR-D 371
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+ W ++++ ++ K A + +++ L N + +S + + SH
Sbjct: 372 VVSWTSMISAYGMNGKGRDAVSLFSRMQDLG-LNPDSIAFVSVLSACSH 419
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/593 (40%), Positives = 372/593 (62%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
Q +++ Y++M EG P+ T+ VL AC + G + H+ IV++ D V T+L
Sbjct: 228 QESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTAL 287
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+Y+ CG + DA +VF+ +P+++V++W +I G ++ G LEEA MF R+L + PD
Sbjct: 288 TKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDR 347
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+ + +L+AC + G L+ K IH + G +V +L+++Y+K G+M+ AR+VFD+
Sbjct: 348 VTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDR 407
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
MP++D+VSW++++ GYA G E+ F M ++ ++ T + VL AC++ AL+ G
Sbjct: 408 MPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWG 467
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + + ++ + L+ MY KCG + A +V M +D V WN ++ GL+ N
Sbjct: 468 KEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQN 527
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G A F ++ ++PN TFV ++ C LV+EGR+ F SM + + + P +H
Sbjct: 528 GRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKH 587
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
Y CMVD+L R+G L EA ++I +MP +P+A +WGALLA CR H ++ E Q + LE
Sbjct: 588 YACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLE 647
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P N+G YV LS IY+A+ W D AK+R +M ++G++K G SW+EV G VH F+ GD SH
Sbjct: 648 PQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSH 707
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P +E+IYS+L+ L ++K+ G+VP T V+ D+++E K+ + HSEKLA+A+GLI+T P
Sbjct: 708 PRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPP 767
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ IR++KNLRVC DCH A K ISKITGREII RD +RFH F G CSC D+W
Sbjct: 768 ETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 229/405 (56%), Gaps = 2/405 (0%)
Query: 6 VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
S D + + + +G ++ + +L++C + D +G + H I++ G+ +
Sbjct: 20 TSTDGWYAPADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNV 79
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
++ +LL LYVHCG + +A ++FD +K+VVSW +ISGY + G +EA N+F +
Sbjct: 80 YIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQE 139
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
GL+PD F+ V +L+AC+ L+ + +H V EAG N V +L+ +YAKCG++ A
Sbjct: 140 GLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDA 199
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
RRVFD M +D VSW+++ YA +G+ +E+L ++ M +E ++P T + VLSAC SL
Sbjct: 200 RRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSL 259
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
ALE G + + +E S+ + T L MY KCG + A +VF + ++D + WN ++
Sbjct: 260 AALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMI 319
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
GL +G ++ A G+F ++ K + P+ T++ +L C G + G++ ++ + L
Sbjct: 320 GGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKE-IHARAVKDGL 378
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ ++++ ++G + +A ++ MP + + + W AL+ G
Sbjct: 379 VSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALVGG 422
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 222/448 (49%), Gaps = 37/448 (8%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ Q A + M+ EG P FTF +L AC+ G H +++AG
Sbjct: 116 MISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAG 175
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + V +L+++Y CG + DA +VFD + ++ VSWT + Y G +E++ +
Sbjct: 176 LANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYH 235
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G++P + + VL+AC L L K IH + E+ +V V+T+L +Y KCG
Sbjct: 236 AMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCG 295
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR VF+ +P +D+++W++MI G +G +EA MF+ M +E + P+ T + +LS
Sbjct: 296 AVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILS 355
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA G L G + ++ +S+ G LI+MY+K G M A +VF M +D V
Sbjct: 356 ACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVS 415
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT-----------HAGLV 349
W A+V G + G V +F F ++ + G++ N T++ +L C+ HA +V
Sbjct: 416 WTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVV 475
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLL------------------------GRSGQL 385
G F ++ +L M G + D + GR +
Sbjct: 476 KAG--IFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEA 533
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRL 413
+ E++KS M PNA + +++ CR+
Sbjct: 534 LQKFEVMKSEEMRPNATTFVNVMSACRV 561
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 179/342 (52%), Gaps = 5/342 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G V + + A ++ M E P T+ +L ACAR G H+ VK G
Sbjct: 318 MIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDG 377
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D +L+N+Y G + DA +VFD +P ++VVSWTA++ GY + G + E+ + F+
Sbjct: 378 LVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFK 437
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L +G++ + + + VL AC+ L K IH V +AG ++ VA +L+ +Y KCG
Sbjct: 438 KMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCG 497
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A RV + M +D+V+W+++I G A NG EAL F M+ E ++P T V V+S
Sbjct: 498 SVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMS 557
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK-D 297
AC +E G + M R ++ P ++D+ A+ G + +A V M K
Sbjct: 558 ACRVRNLVEEGRRQFASM-RKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPS 616
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
+W A+++ +G V++ Q K Q N T+V L
Sbjct: 617 AAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQ-NAGTYVSL 657
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/653 (39%), Positives = 383/653 (58%), Gaps = 65/653 (9%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS-HSLIVKAGLDCD-EFVKTSLLNL 74
Y MR G FTF F+ K CAR L + H+ + L V ++++
Sbjct: 90 LYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHM 149
Query: 75 YVHCGYLADALKVFDDIPDK-------------------------------NVVSWTAII 103
YV G DA + FDDIP K NV+SWT +I
Sbjct: 150 YVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLI 209
Query: 104 SGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG 163
SGY G EA++ F +L G++PD +++ +L+AC QL DL + +H V E G
Sbjct: 210 SGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGML 269
Query: 164 RNVFVATSLVDLYAKCGNMEKA--------------------------------RRVFDQ 191
+ + +L+D+YAKCG++ +A R +FDQ
Sbjct: 270 MSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQ 329
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M ++D+V+++S+I GY G +EAL +F M+R +L+ + +TMV +L+ACASLGAL G
Sbjct: 330 MEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQG 389
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ +E+ + LGT L+DMY KCGR+ +A VF+ M +D W+A+++GL+ N
Sbjct: 390 RALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFN 449
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G K A F ++ G QPN T++ +L C+H+ L+DEGR +F M + ++ P+IEH
Sbjct: 450 GMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEH 509
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
YGCM+DLLGRSG LDEA +L+++MPM+PNA++W ++L+ CR+HK +LA + L+ LE
Sbjct: 510 YGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLE 569
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P YV L NIY S +W DA++IR +M ++G++K G S + V G VH+F+V D +H
Sbjct: 570 PDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTH 629
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P +I + ++E+ +LK+ G+ P T + D++EEEK++ L HSEK+A+AFGLI+ AP
Sbjct: 630 PQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAP 689
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ I KNLRVC DCH AIKLIS+I REIIVRD +RFH F +G+CSC DFW
Sbjct: 690 NLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 184/369 (49%), Gaps = 42/369 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ A++ +NSM ++G P T +L ACA+ D G H L+ + G
Sbjct: 208 LISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKG 267
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKV--------------------------------F 88
+ + +L+++Y CG + A +V F
Sbjct: 268 MLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLF 327
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
D + D+++V++ ++I+GYI+ G L EA+ +F ++ L+ D+F++V +LTAC LG L
Sbjct: 328 DQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALP 387
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+ +H + + ++++ T+L+D+Y KCG +E+A VF M +D+ +WS+MI G A
Sbjct: 388 QGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLA 447
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN-- 266
NG K AL+ F+ M+ + +P T + +L+AC+ L+ G + E L N
Sbjct: 448 FNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEG---RLYFEEMRLLHNIR 504
Query: 267 PVLGT--TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
P++ +ID+ + G + +A + R M + V+W +++S ++ +A
Sbjct: 505 PLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEH 564
Query: 324 LEKCGIQPN 332
L K ++P+
Sbjct: 565 LLK--LEPD 571
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 192/430 (44%), Gaps = 75/430 (17%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD------ALKVFDDIPDKNVVSWTAIISGY 106
H+++V +G + LLN V+C D AL +FD +P + TA+ + +
Sbjct: 19 HAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFLFDTALRACF 78
Query: 107 INEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC-------------------TQLGD- 146
E + ++RR+ G+ D+F+ + C T L
Sbjct: 79 RASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSA 138
Query: 147 --LSTAKWIHGYVN--EAGKGRNVF--------VA-TSLVDLYAKCGNMEKARRVFDQMP 193
L + IH YV AG R F VA T+++ AK G ++ A + P
Sbjct: 139 VPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSP 198
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
++++SW+ +I GY+ G EA+D F +M + ++P+ T++G+LSACA L L G
Sbjct: 199 ARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRS 258
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA-----------------------CK-- 288
+ L + L LIDMYAKCG + +A CK
Sbjct: 259 LHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLG 318
Query: 289 -------VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
+F +M+D+D V +N++++G G ++ A +F Q+ + ++ + T V LL
Sbjct: 319 HVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLT 378
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPN 400
C G + +GR + + L + + G ++D+ + G+++EA + ++M + +
Sbjct: 379 ACASLGALPQGRALHACIEQ--RLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVR-D 435
Query: 401 AIVWGALLAG 410
W A++AG
Sbjct: 436 VHTWSAMIAG 445
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/604 (41%), Positives = 365/604 (60%), Gaps = 34/604 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR +V+N +Q A+ + +M N+GF P N+T+P VLKAC+ + +G++ H +VK G
Sbjct: 108 MIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLG 167
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + ++ L+++Y C +L A +V D++P +++VSW ++++GY G +A+ + R
Sbjct: 168 LDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCR 227
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ LKPD+ ++ +L A T C
Sbjct: 228 EMEDLKLKPDAGTMGSLLPAVTN---------------------------------TSCD 254
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ + +F ++ EK ++SW+ MI Y +N P EA+D++ MQ ++P+ ++ VL
Sbjct: 255 NVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLP 314
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC L A LG ++ER + N +L LIDMYAKCG + +A VF +M +D V
Sbjct: 315 ACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVS 374
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++S M+G K A +F ++ G P+ FV +L C+HAGLVDEGR FN M+
Sbjct: 375 WTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA 434
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ +TP IEHY CMVDLLGR+G++DEA+ L + MPMEPN VWG+LL+ CR++ ++A
Sbjct: 435 E-YGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIA 493
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ L L P SG YVLLSNIY+ + +W D +RS+M KGI+KI G S VE++
Sbjct: 494 LLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDH 553
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V+ FL GD SH S++IY L L ++K G++P TD L D+EEE+K+ LA HSEKL
Sbjct: 554 VYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKL 613
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+ F ++ T P IRI KN+RVCGDCH A KLISKI REII+RD +RFH F +G CSC
Sbjct: 614 AIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSC 673
Query: 601 KDFW 604
D+W
Sbjct: 674 GDYW 677
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 258/590 (43%), Positives = 376/590 (63%), Gaps = 13/590 (2%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRS---------HSLIVKAGLDCDEFVKTSLLNLYVHC 78
P + + P LK+ ++ L RS H+ +++ G D F+ LL C
Sbjct: 25 PNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKC 84
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
+ A ++F + NV +TA+I G+++ GN EAI ++ R+LH + PD++ + +L
Sbjct: 85 HAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASIL 144
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE---- 194
AC L + +H + G N V +++LY KCG + ARRVF++MPE
Sbjct: 145 KACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVA 204
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
KD V W++MI G+ N AL+ F MQ EN++P +T+V VLSAC+ LGALE+G W
Sbjct: 205 KDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWV 264
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
S+M + E N +G LI+MY++CG + +A VF EMKD+D + +N ++SGLSMNG
Sbjct: 265 HSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKS 324
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
+ A +F + ++P TFVG+L C+H GLVD G + F+SM+R + + P IEHYGC
Sbjct: 325 RQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGC 384
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWN 434
MVDLLGR G+L+EA++LI++M M P+ I+ G LL+ C++HK +L E V +L +
Sbjct: 385 MVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQAD 444
Query: 435 SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLS 494
SG YVLLS++Y++S KW +AA++R+ M + G+QK GCS +EV+ +HEFL+GD HP
Sbjct: 445 SGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQK 504
Query: 495 EKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDV 554
E+IY KL+EL L+ G+ P + VL DIE+ EK++ LA HSE+LA+ +GLI+T P +
Sbjct: 505 ERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTM 564
Query: 555 IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IR+ KNLRVC DCH AIKLI+KIT R+I+VRD NRFH F G+CSC D+W
Sbjct: 565 IRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 614
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 200/346 (57%), Gaps = 9/346 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GFVS+ + AI+ Y+ M +E LP N+ +LKAC + + G HS +K G
Sbjct: 108 LIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLG 167
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD----KNVVSWTAIISGYINEGNLEEAI 116
+ V+ ++ LY CG L DA +VF+++P+ K+ V WTA+I G++ A+
Sbjct: 168 FSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRAL 227
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
FR + ++P+ F+IV VL+AC+QLG L +W+H Y+ + N+FV +L+++Y
Sbjct: 228 EAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMY 287
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
++CG++++A+ VFD+M ++D++++++MI G + NG ++A+++F M L+P T V
Sbjct: 288 SRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFV 347
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK 294
GVL+AC+ G ++ G M R+ + P + ++D+ + GR+ +A + R MK
Sbjct: 348 GVLNACSHGGLVDFGFEIFHSMARD-YRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMK 406
Query: 295 -DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
D ++ ++S M+ +++ V +LE G Q + T+V L
Sbjct: 407 MTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRG-QADSGTYVLL 451
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/605 (40%), Positives = 374/605 (61%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+VSN + + + M G T V CA LG H VKA
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKAC 326
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ +LL++Y CG L A VF ++ ++VVS+T++I+GY EG EA+ +F
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ PD +++ VL C + L K +H ++ E G ++FV+ +L+D+YAKCG
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCG 446
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVL 239
+M +A VF +M KDI+SW+++I GY+ N + EAL +F + E P+ T+ VL
Sbjct: 447 SMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVL 506
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACASL A + G ++ RN + S+ + +L+DMYAKCG + A +F ++ KD V
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLV 566
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W +++G M+G+ K A +F Q+ + GI+P+ +FV LL C+H+GLVDEG +FFN M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ P +EHY C+VD+L R+G L +A+ I++MP+ P+A +WGALL GCR+H L
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE V ++ LEP N+G YVL++NIY+ + KW + ++R +G +G++K GCSW+E+ G
Sbjct: 687 AERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKG 746
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V+ F+ GD+S+P +EKI + L + ++ G+ P T + L D EE EK+ L HSEK
Sbjct: 747 RVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEK 806
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A G+I++ +IR+ KNLRVCGDCHE K +SK+T REI++RD+NRFH F +G CS
Sbjct: 807 LAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 866
Query: 600 CKDFW 604
C+ FW
Sbjct: 867 CRGFW 871
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 224/444 (50%), Gaps = 12/444 (2%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
F +I + M + G ++TF V K+ + G + H I+K+G V S
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNS 235
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ Y+ + A KVFD++ +++V+SW +II+GY++ G E+ +++F ++L G++ D
Sbjct: 236 LVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEID 295
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+IV V C +S + +H + +A R +L+D+Y+KCG+++ A+ VF
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFR 355
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M + +VS++SMI GYA G EA+ +F M+ E + P+ YT+ VL+ CA L+
Sbjct: 356 EMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDE 415
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G +++ N+ + + L+DMYAKCG M +A VF EM+ KD + WN V+ G S
Sbjct: 416 GKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSK 475
Query: 311 NGYVKVAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
N Y A +F L EK P+ T +L C D+GR+ + R +
Sbjct: 476 NCYANEALSLFNLLLVEK-RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD- 533
Query: 369 IEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
H +VD+ + G L A L + + + W ++AG +H A + NQ+
Sbjct: 534 -RHVANSLVDMYAKCGALLLARLLFDDIT-SKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Query: 428 --IALEPWNSGNYVLLSNIYSASH 449
+EP +S +Y+ SH
Sbjct: 592 RQAGIEP---DEISFVSLLYACSH 612
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 193/379 (50%), Gaps = 2/379 (0%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T VL+ CA + G + I G D + + L +Y +CG L +A +VFD +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQV 155
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
+ + W +++ G+ +I +F++++ G++ DS++ V + + L ++ +
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGE 215
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+HGY+ ++G G V SLV Y K ++ AR+VFD+M E+D++SW+S+I GY SNG
Sbjct: 216 QLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
++ L +F M ++ + T+V V + CA + LG F + F
Sbjct: 276 LAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCN 335
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
TL+DMY+KCG + A VFREM + V + ++++G + G A +F ++E+ GI P
Sbjct: 336 TLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ T +L C L+DEG++ + + + I ++D+ + G + EA EL
Sbjct: 396 DVYTVTAVLNCCARNRLLDEGKRVHEWI-KENDMGFDIFVSNALMDMYAKCGSMREA-EL 453
Query: 392 IKSMPMEPNAIVWGALLAG 410
+ S + I W ++ G
Sbjct: 454 VFSEMRVKDIISWNTVIGG 472
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 155/332 (46%), Gaps = 14/332 (4%)
Query: 82 ADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK--PDSFSIVRVLT 139
AD++ FD ++V + + GNL+ A+ +LLH K D ++ VL
Sbjct: 51 ADSITTFD----RSVTDANTQLRRFCESGNLKNAV----KLLHVSGKWDIDPRTLCSVLQ 102
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
C L K + ++ G + + + L +Y CG++++A RVFDQ+ + +
Sbjct: 103 LCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALF 162
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W+ ++ A +G ++ +F M ++ + YT V + +SL ++ G ++
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYIL 222
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
++ F +G +L+ Y K R+ A KVF EM ++D + WN++++G NG +
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SMSRVFSLTPMIEHYGCMVDL 378
VF Q+ GI+ + T V + GC + L+ GR + FS ++D+
Sbjct: 283 VFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRED--RFCNTLLDM 340
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ G LD A + + M + + + +++AG
Sbjct: 341 YSKCGDLDSAKVVFREMSGR-SVVSYTSMIAG 371
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/605 (42%), Positives = 378/605 (62%), Gaps = 48/605 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPT-----NFTFPFVLKACAREHDFQLGVRSHSL 55
+++ F ++ + I ++N N+ LP +TF VLKACA G + H
Sbjct: 96 LLKAFSQHNAWHTTISYFN---NQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCF 152
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
+ K G + + FV+ SL++LY G A K+FD++ ++VVSW +ISGY G +++A
Sbjct: 153 VTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKA 212
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+F ++ + L W ++++
Sbjct: 213 RMVFDGMMEKNL----------------------VSW-----------------STMISG 233
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYT 234
YA+ GN+E+AR++F+ MP +++VSW++MI GYA N +A+++F MQ E L P T
Sbjct: 234 YARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVT 293
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+V VLSACA LGAL+LG W F+ RN+ LG L DMYAKCG + +A VF EM
Sbjct: 294 LVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMH 353
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
++D + W+ ++ GL+M GY AF F ++ + G++PN +F+GLL CTHAGLVD+G +
Sbjct: 354 ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLE 413
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+F+ M +V+ +TP IEHYGC+VDLL R+G+LD+A LI SMPM+PN IVWGALL GCR++
Sbjct: 414 YFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIY 473
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K + E V+ +++ L+ +SG+ V L+N+Y++ + +DAA R M D K GCSW
Sbjct: 474 KDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSW 533
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+E++ V+EF +GD+SHP S +IYS + EL K+K AG+ P TD V+ +I+EEEK+ L+
Sbjct: 534 IEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALS 593
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLALAFGLI T+ IRI KNLRVC DCH+AIK+ISKI REI+VRD +RFH F
Sbjct: 594 THSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFK 653
Query: 595 EGSCS 599
+G CS
Sbjct: 654 DGKCS 658
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/655 (39%), Positives = 388/655 (59%), Gaps = 67/655 (10%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLK---ACAREHDFQLGVRSHSLIVKAGL-DCDEFVKTSLL 72
+ MR G P FTF F+ K + +R H L H+ ++ L FV SL+
Sbjct: 90 LFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLI 149
Query: 73 NLYVHCGYLADALKVFDDI-------------------------------PDKNVVSWTA 101
++Y+ G ADA + FD+I P ++V+SWT+
Sbjct: 150 HMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTS 209
Query: 102 IISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG 161
+I+ Y EA+ F+ +L G+ PD +++ VL+AC +L DL + +H V E G
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269
Query: 162 KGRNVFVATSLVDLYAKCGN--------------------------------MEKARRVF 189
+ + +L+D+YAKCG+ ++ AR +F
Sbjct: 270 MPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLF 329
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D+M +DI++++SM+ GY +G +EAL +F +M+R +L+ + +T+V +L+ACASLGAL+
Sbjct: 330 DEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQ 389
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + +E+ ++ LGT L+DMY KCGR+ +A VF+ M +D W A+++GL+
Sbjct: 390 QGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLA 449
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
NG K A F Q+ G QPN +++ +L C+H+ L++EGR +F+ M ++++ P I
Sbjct: 450 FNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQI 509
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
EHYGCM+DLLGRSG LDEA +L+K+MP++PNA++W ++L+ CR+HK DLA+ L+
Sbjct: 510 EHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLK 569
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
LEP G YV L NIY S +W +A+KIR +M ++ ++K G S + V G VH+F+V D
Sbjct: 570 LEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDK 629
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
SHP +I + L+E++ +LK+ G+ P T + D++EEEK+ L HSEKLA+AFGLI
Sbjct: 630 SHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINL 689
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
AP + I KNLRVC DCH AIKLIS++ REIIVRD +RFH F EG+CSC DFW
Sbjct: 690 APNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 179/354 (50%), Gaps = 40/354 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + + + A+ + +M + G P T VL ACA+ D +LG H L+ + G
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKV--------------------------------F 88
+ E + +L+++Y CG A +V F
Sbjct: 270 MPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLF 329
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
D++ ++++++ ++++GYI+ G L EA+ +F + L+ D+F++V +LTAC LG L
Sbjct: 330 DEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQ 389
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+ +H + + ++++ T+L+D+Y KCG +++A VF +M ++D+ +W++MI G A
Sbjct: 390 QGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLA 449
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN-- 266
NG K AL+ FY M+ + +P + + VL+AC+ L G + + L N
Sbjct: 450 FNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEG---RLYFDEMRILYNIH 506
Query: 267 PVLGT--TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
P + +ID+ + G + +A + + M + V+W +++S ++ ++ +A
Sbjct: 507 PQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLA 560
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 147/329 (44%), Gaps = 41/329 (12%)
Query: 70 SLLN-LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
SL+N L H +L AL +FD +P + TA+ + + +FRR+ G++
Sbjct: 41 SLVNCLEPHPLHLRYALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVR 100
Query: 129 PDSFS---IVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVATSLVDLYAKCGNMEK 184
PD F+ + + ++ ++ L +H + FV+ SL+ +Y + G
Sbjct: 101 PDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAAD 160
Query: 185 ARRVFD-------------------------------QMPEKDIVSWSSMIQGYASNGFP 213
ARR FD Q P +D++SW+S+I Y+
Sbjct: 161 ARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRA 220
Query: 214 KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
+EA+ F M + P+ T++ VLSACA L LELG +E ++ L L
Sbjct: 221 REAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVAL 280
Query: 274 IDMYAKCGRMAQACKVFREM-KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
IDMYAKCG A +VF + + WNA++ G +G+V VA +F ++E I
Sbjct: 281 IDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDII-- 338
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
TF ++ G H+G + E F SM R
Sbjct: 339 --TFNSMMTGYIHSGQLREALLLFMSMRR 365
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/628 (39%), Positives = 377/628 (60%), Gaps = 24/628 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+ + S+ +H++ +N +R+ G P FP +L+A F L H+ +++ G
Sbjct: 47 IIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLG 106
Query: 61 LDCDEFVKTSLLNLYV----HCGYLAD------------------ALKVFDDIPDKNVVS 98
D + +L+N+Y H L + K+FD +P ++VVS
Sbjct: 107 FHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVS 166
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
W +I+G G EEA+NM + + L+PDSF++ +L T+ +++ K IHGY
Sbjct: 167 WNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAI 226
Query: 159 EAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALD 218
G ++VF+ +SL+D+YAKC +E + F + +D +SW+S+I G NG + L
Sbjct: 227 RHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLG 286
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
F M +E +KP + V+ ACA L AL LG +++ R F N + ++L+DMYA
Sbjct: 287 FFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYA 346
Query: 279 KCGRMAQACKVFR--EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
KCG + A +F EM D+D V W A++ G +M+G+ A +F ++ G++P F
Sbjct: 347 KCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAF 406
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
+ +L C+HAGLVDEG ++FNSM R F + P +EHY + DLLGR+G+L+EA++ I +M
Sbjct: 407 MAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMG 466
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAK 456
EP VW LLA CR HK +LAE V+N+++ ++P N G +V++SNIYSA+ +W DAAK
Sbjct: 467 EEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAK 526
Query: 457 IRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
+R M G++K CSW+EV VH FL GD SHP +KI L+ L +++ G+V
Sbjct: 527 LRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLD 586
Query: 517 TDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISK 576
T+ VL D++EE K+ L HSE+LA+AFG+I+T IR+ KN+RVC DCH AIK ++K
Sbjct: 587 TNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAK 646
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I GREIIVRDN+RFH F GSCSC D+W
Sbjct: 647 IVGREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 166/342 (48%), Gaps = 26/342 (7%)
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
++W II Y + G L ++ F L G+ PD +L A T + A+ +H
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101
Query: 157 VNEAGKGRNVFVATSLVDLYAK----------------------CGNMEKARRVFDQMPE 194
V G +++ A +L+++Y+K ++ R++FD+MP
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
+D+VSW+++I G A NG +EAL+M M +ENL+P+ +T+ +L + G
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
+ R+ F + +G++LIDMYAKC ++ + F + ++D + WN++++G NG
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRF 281
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYG 373
G F ++ K ++P +F ++ C H ++ G+Q + R+ F I
Sbjct: 282 DQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIA--S 339
Query: 374 CMVDLLGRSGQLDEAHELIKSMPM-EPNAIVWGALLAGCRLH 414
++D+ + G + A + + M + + + W A++ GC +H
Sbjct: 340 SLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMH 381
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/604 (41%), Positives = 369/604 (61%), Gaps = 34/604 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR +V+N ++ A+ Y +M +GF+P +T+P VLKA +R +G++ H ++K G
Sbjct: 91 MIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIG 150
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + +V L+ +Y C L +A +V D+IP ++VVSW +++S Y G +A+ + R
Sbjct: 151 LDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCR 210
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ LKP+ ++ +L A T TS LY K
Sbjct: 211 EMEALNLKPNDCTMASLLPAVTN-------------------------TTSDNVLYVK-- 243
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+F ++ +K ++SW+ MI Y +N PKEA+ ++ M+ ++P+ ++V VL
Sbjct: 244 ------EMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLP 297
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A L AL LG F ER + L N +L LIDMYAKCG + A VF +M+ +D V
Sbjct: 298 AYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVS 357
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++S G + A VF ++ G+ P+ FV +L C+HAGL+D+GR +FN M+
Sbjct: 358 WTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMA 417
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+TP +EH+ C+VDLLGR+G++DEA+ I+ MP+EP+ VWG LL+ CR++ ++
Sbjct: 418 EC-GITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIG 476
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
++L+ L P +SG YVLLSNIY+ + +W D A IRS+M KGI+K+ G S VE++
Sbjct: 477 ILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDG 536
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL GD+SHP S+KIY +LD L K+K G++P TD L D+EEE+K+Y LA HSEKL
Sbjct: 537 VHTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKL 596
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF +I T P IR+ KNLRVCGDCH A KLISKI REII+RD +RFH F EG CSC
Sbjct: 597 AVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSC 656
Query: 601 KDFW 604
D+W
Sbjct: 657 GDYW 660
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 1/205 (0%)
Query: 143 QLGDLSTAKWIHGYV-NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
Q D++T K +HG V N+ N V L+ +YA CG AR +FD++ +K++V ++
Sbjct: 30 QYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFN 89
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
MI+ Y +N K+AL ++ M + P+ YT VL A + +L +G+ + +
Sbjct: 90 VMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKI 149
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
N +G LI MY KC + +A +V E+ +D V WN++VS + NG A +
Sbjct: 150 GLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELC 209
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHA 346
++E ++PN T LL T+
Sbjct: 210 REMEALNLKPNDCTMASLLPAVTNT 234
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
NP +G L+ +YA CG A +F E+ DK+ V +N ++ N K A V+ +
Sbjct: 53 NPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMY 112
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
G P+ T+ +L + + + G Q ++ ++ L + ++ + G+ L
Sbjct: 113 TQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKI-GLDLNLYVGNGLIAMYGKCKSL 171
Query: 386 DEAHELIKSMPMEPNAIVWGALLA 409
EA +++ +P + + W ++++
Sbjct: 172 KEAQQVLDEIPCR-DVVSWNSMVS 194
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/568 (44%), Positives = 358/568 (63%), Gaps = 19/568 (3%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ +++ GL D F + L+ + L A +VFD IP N+ +W +I Y +
Sbjct: 55 HAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSS 114
Query: 111 NLEEAINMFRRLLHRGLK-PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
N +++ +F R+LH+ PD F+ ++ A ++L +L T K HG V + G +VF+
Sbjct: 115 NPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFIL 174
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
SL+ YAKCG + RVF P +D+VSW+SMI + G P+EAL++F M+ +N+K
Sbjct: 175 NSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVK 234
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P TMVGVLSACA E G W S++ERN + L ++DMY KCG + A ++
Sbjct: 235 PNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRL 294
Query: 290 FREMKDKDQVVWNAVV------------SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
F +M +KD V W ++ GL+M+G+ K A +F ++++ ++PN TF
Sbjct: 295 FDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFT 354
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
+LC C+H GLV+EGR FFN M V+ + P ++HY CMVD+LGR+G L+EA ELI+ MPM
Sbjct: 355 NILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPM 414
Query: 398 EPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKI 457
P A VWGALL C +H+ LAE +QLI LEP N G YVLLSNIY+ + KW+ + +
Sbjct: 415 APAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGL 474
Query: 458 RSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTT 517
R +M D G++K GCS +EVDG+VHEFLVGDNSHP ++KIY+KLDE+ +L+ G+VP
Sbjct: 475 RKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNK 534
Query: 518 DHVLFDIEEEE-KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISK 576
H+L +EEE+ K+ L HSEKLA+AFGLI+T IRI KNLRVCGDCH KL+SK
Sbjct: 535 SHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSK 594
Query: 577 ITGREIIVRDNNRFHCFIE-GSCSCKDF 603
+ REI++RD R ++ G S +DF
Sbjct: 595 LYDREILLRD--RVWIVVDYGRISYEDF 620
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 185/342 (54%), Gaps = 21/342 (6%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR + S+ + Q + F + P FTFPF++KA + + G H +++K
Sbjct: 106 LIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKV 165
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L D F+ SL++ Y CG L +VF + P ++VVSW ++I+ ++ G EEA+ +F
Sbjct: 166 LLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELF 225
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ + + +KP+ ++V VL+AC + D +W+H Y+ ++ ++ +++D+Y KC
Sbjct: 226 QEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKC 285
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYAS------------NGFPKEALDMFYNMQREN 227
G++E A+R+FD+MPEKDIVSW++M+ GYA +G K+A+ +F MQ +
Sbjct: 286 GSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDK 345
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT----LIDMYAKCGRM 283
+KP T +L AC+ +G +E G +F + E + + G ++D+ + G +
Sbjct: 346 VKPNAVTFTNILCACSHVGLVEEG---RTFFNQMELVYGVLPGVKHYACMVDILGRAGLL 402
Query: 284 AQACKVFREMKDKDQV-VWNAVVSGLSMNGYVKVAFGVFGQL 324
+A ++ +M VW A++ +++ V +A QL
Sbjct: 403 EEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQL 444
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/635 (38%), Positives = 377/635 (59%), Gaps = 31/635 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + + A+ + M G P T + ACA+ D +LG + +L+ + G
Sbjct: 194 LINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELG 253
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + V +LL++Y+ CG + ++FD+ DKN+V + I+S Y+ G E + +
Sbjct: 254 VKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLD 313
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L +G +PD +++ + AC QLGDLS K H YV G R ++ +++D+Y KCG
Sbjct: 314 EMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCG 373
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNG-----------FPK--------------- 214
E A +VFD M K +V+W+S+I G +G P+
Sbjct: 374 KREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQ 433
Query: 215 -----EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
EA+D+ MQ + +K + TMVG+ SAC LGAL+L W +++E+N+ + L
Sbjct: 434 ASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQL 493
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
GT L+DM+++CG A +VF M+ +D W A + ++ G K A +F ++ K +
Sbjct: 494 GTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDV 553
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+ + FV LL +H G VD+GRQ F +M ++ ++P I HYGCMVDLLGR+G L+EA
Sbjct: 554 KADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAF 613
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+L+KSMP++PN ++WG+ LA CR HK + A + ++ L P G +VLLSNIY+++
Sbjct: 614 DLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAG 673
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
KWND A++R M +KG QK+ G S +EV G++ EF GD SH + +I L E+ ++
Sbjct: 674 KWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRIS 733
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
G+VP T +VL D++E+EK++ L+ HSEKLA+A+GLI T IR+ KNLR+C DCH
Sbjct: 734 QVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHS 793
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KL+SK+ GREI VRDNNR+H F EG CSC+DFW
Sbjct: 794 FAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 208/360 (57%), Gaps = 5/360 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMR-NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRG+ ++ + AI Y M G +P NFTFPF+L AC++ F GV+ H ++VK
Sbjct: 92 LIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKM 151
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL D FV SL++ Y CG + KVFD++ ++NVVSWT++I+GY +EA+ +F
Sbjct: 152 GLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLF 211
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G++P+ ++V ++AC +L DL K + + E G N V +L+D+Y KC
Sbjct: 212 FEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKC 271
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+M R +FD+ +K++V +++++ Y +G E L + M ++ +P+ TM+ +
Sbjct: 272 GDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTI 331
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+ACA LG L +G + +++ RN + +IDMY KCG+ ACKVF M +K V
Sbjct: 332 AACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVV 391
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN++++GL +G +++A +FG++ + + + NT +G + A + +E M
Sbjct: 392 TWNSLIAGLVRDGELELALRIFGEMPESNL-VSWNTMIGAM---VQASMFEEAIDLLREM 447
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 197/378 (52%), Gaps = 20/378 (5%)
Query: 101 AIISGYINEGNLEEAINMF-RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE 159
+I GY G +EAI ++ ++ G+ PD+F+ +L+AC+++ S +HG V +
Sbjct: 91 TLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVK 150
Query: 160 AGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDM 219
G +++FVA SL+ YA CG ++ R+VFD+M E+++VSW+S+I GY+ KEA+ +
Sbjct: 151 MGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCL 210
Query: 220 FYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK 279
F+ M ++P TMV +SACA L LELG + M SN ++ L+DMY K
Sbjct: 211 FFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMK 270
Query: 280 CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
CG M ++F E DK+ V++N ++S +G V ++ + G +P+ T +
Sbjct: 271 CGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLST 330
Query: 340 LCGCTHAGLVDEGRQ-----FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
+ C G + G+ F N + R+ +++ I +D+ + G+ + A ++ S
Sbjct: 331 IAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAI------IDMYMKCGKREAACKVFDS 384
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEPWNSGNYVLLSNIYSASHKWN 452
M + W +L+AG + +LA + ++ L WN+ ++ + AS +
Sbjct: 385 MS-NKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNT----MIGAMVQASM-FE 438
Query: 453 DAAKIRSMMGDKGIQKIR 470
+A + M ++GI+ R
Sbjct: 439 EAIDLLREMQNQGIKGDR 456
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD-----IVSWSSMIQGYASNGFPKEALD 218
+ VF L+ + G E + E + + + +++I+GYA++G KEA+
Sbjct: 48 KGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKEAIF 107
Query: 219 MFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
++ +M + P+ +T +LSAC+ + A GV + + + + + +LI Y
Sbjct: 108 IYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFY 167
Query: 278 AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
A CG++ KVF EM +++ V W ++++G S+ K A +F ++ + G++PN T V
Sbjct: 168 AACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMV 227
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRV 362
+ C ++ G++ N M+ +
Sbjct: 228 CAISACAKLKDLELGKKVCNLMTEL 252
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/604 (40%), Positives = 370/604 (61%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N + A+ M EG P + T +L A A ++G+ H +++AG
Sbjct: 102 MISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAG 161
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V T+L+++Y CG ++ A +FD + + VVSW ++I GY+ G+ E A+ +F+
Sbjct: 162 FESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQ 221
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L G++P + +++ L AC LGDL K++H V++ +V V SL+ +Y+KC
Sbjct: 222 KMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCK 281
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +F + K +VSW++MI GYA NG EAL+ F MQ N+KP+ +TMV V+
Sbjct: 282 RVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIP 341
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A L W + R N + T L+DMYAKCG + A K+F M + +
Sbjct: 342 ALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVIT 401
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G +G K + +F +++K I+PN TF+ L C+H+GLV+EG FF SM
Sbjct: 402 WNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMK 461
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + P ++HYG MVDLLGR+G+L++A + I+ MP++P V+GA+L C++HK DL
Sbjct: 462 KDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLG 521
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E ++ L P + G +VLL+NIY+ + W AK+R++M G+QK GCS VE+
Sbjct: 522 EKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNE 581
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F G SHP S+KIYS L+ L +++AAG+VP T+ + D+E++ K L HSEKL
Sbjct: 582 VHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSI-HDVEDDVKVQLLNTHSEKL 640
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL+ T+ I I KNLRVCGDCH A K IS +TGREIIVRD +RFH F +G CSC
Sbjct: 641 AIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSC 700
Query: 601 KDFW 604
D+W
Sbjct: 701 GDYW 704
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 220/414 (53%), Gaps = 2/414 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++G+ + A+ F++ M+++ P + F ++LK C D + G H ++ +G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ F T ++N+Y C + DA +FD +P++++V W +ISGY G + A+ +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G +PDS +IV +L A L +HGYV AG V V+T+LVD+Y+KCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR +FD M + +VSW+SMI GY +G + A+ +F M E ++P T++G L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LG LE G + +++ + S+ + +LI MY+KC R+ A +F+ +++K V
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G + NG V A F +++ I+P+ T V ++ + + + +
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R F L + +VD+ + G + A +L M + I W A++ G H
Sbjct: 361 RRF-LDKNVFVMTALVDMYAKCGAIHTARKLFDMMNAR-HVITWNAMIDGYGTH 412
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/605 (42%), Positives = 375/605 (61%), Gaps = 10/605 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+ +V N I ++ + +E +LP NFT P V+K CAR Q G + H L +K G
Sbjct: 84 IIKCYVENQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIG 142
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV+ SL+N+Y CG + A KVFD + DK+VV W ++I GY G ++ A+ +F
Sbjct: 143 FGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFE 202
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ R D+FS ++ ++ G + +A+ + + RN+ ++++ Y K G
Sbjct: 203 EMPER----DAFSWTVLVDGLSKCGKVESARKLF----DQMPCRNLVSWNAMINGYMKSG 254
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + A +F QMP D+V+W+ MI GY NG +A+ MF+ M + +P + T+V VLS
Sbjct: 255 DFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLS 314
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A + L L G W S+ME+N F + +LGT+LI+MYAKCG + A VFR ++ K
Sbjct: 315 AVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGH 374
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ GL ++G A +F ++ K G++PN F+G+L C HAGLVD+GRQ+F+ M
Sbjct: 375 WTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMM 434
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P +EHYGC+VD+L R+G L+EA I++MP+ PN ++W +LL G R H K D+
Sbjct: 435 NEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIG 494
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E+ ++I + P G Y+LLSN+Y+AS W + +R MM +G +K GCS VE G
Sbjct: 495 EYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGT 554
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIE-EEEKQYFLACHSEK 539
+HEF+VGD SHP +++IY+K+ E+ KLK G VP T VL IE E+EK+ L HSE+
Sbjct: 555 LHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSER 614
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI P IRI KNLRVC DCH KL+SKI REIIVRDN RFH F GSCS
Sbjct: 615 LAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCS 674
Query: 600 CKDFW 604
C D+W
Sbjct: 675 CMDYW 679
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 197/408 (48%), Gaps = 23/408 (5%)
Query: 20 SMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV--H 77
+ R EG L F + CA + QL H+ +K + FV + LL LY
Sbjct: 5 TRRYEGLLELGFA-DQRMGLCAPQEVEQL----HAFSLKTAIFNHPFVSSRLLALYSDPK 59
Query: 78 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
L A +FD I ++++ W II Y+ + I +F L+H L PD+F++ V
Sbjct: 60 INDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCV 118
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI 197
+ C +LG + K IHG + G G +VFV SLV++Y+KCG ++ AR+VFD M +KD+
Sbjct: 119 IKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDV 178
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF 257
V W+S+I GYA G AL +F M + + +V LS C + + A
Sbjct: 179 VLWNSLIDGYARCGEIDIALQLFEEMPERD-AFSWTVLVDGLSKCGKVES------ARKL 231
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
++ N V +I+ Y K G A ++F +M D V WN +++G +NG A
Sbjct: 232 FDQMP-CRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDA 290
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMV 376
+F + K G +P+ T V +L + ++ +GR + M + F L ++ ++
Sbjct: 291 VKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILG--TSLI 348
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
++ + G ++ A + +++ + W A++ G +H +A H L
Sbjct: 349 EMYAKCGCIESALTVFRAI-QKKKVGHWTAIIVGLGIH---GMANHAL 392
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/608 (41%), Positives = 380/608 (62%), Gaps = 8/608 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V + + A+ + M +EG P T+ +LKACA + G H+ I G
Sbjct: 100 MIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGG 159
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D V T+LL +Y CG + +A ++FD++ + +++SWT +I Y GN +EA +
Sbjct: 160 LESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLML 219
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G KP++ + V +L AC G L K +H + +AG +V V T+LV +YAK G
Sbjct: 220 QMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSG 279
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ AR VFD+M +D+VSW+ MI +A +G EA D+F MQ E KP+ + +L+
Sbjct: 280 SIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILN 339
Query: 241 ACASLGALELGVWASSFMERNEFLS----NPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
ACAS GALE W + R+ S + +GT L+ MY+K G + A VF MK +
Sbjct: 340 ACASAGALE---WVKK-IHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVR 395
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ V WNA++SGL+ +G + A VF ++ G++P+ TFV +L C+HAGLVDEGR +
Sbjct: 396 NVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQY 455
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+M++V+ + P + H CMVDLLGR+G+L EA I +M ++P+ WGALL CR +
Sbjct: 456 LAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGN 515
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
+L E V + + L+P N+ YVLLSNIY+ + KW+ + +R+MM ++GI+K G SW+E
Sbjct: 516 VELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIE 575
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
VD +H+FLV D+SHP ++I D++ K+KA G++P T VL + ++K+ + H
Sbjct: 576 VDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSH 635
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEKLA+ +GL+ T P + IR+ KNLRVC DCH A KLISK+ GREIIVRD NRFH F +G
Sbjct: 636 SEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDG 695
Query: 597 SCSCKDFW 604
CSC D+W
Sbjct: 696 VCSCGDYW 703
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 218/408 (53%), Gaps = 18/408 (4%)
Query: 23 NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLA 82
G + +F + VLK C ++ D + H I+K+ ++ + V +LL++Y+ CG L
Sbjct: 21 QRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQ 80
Query: 83 DALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT 142
+A VFD + K+ SW A+I+GY+ + E+A+ +FR + H G++P++ + + +L AC
Sbjct: 81 EARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACA 140
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
L L K +H + G +V V T+L+ +Y KCG++ +ARR+FD + DI+SW+
Sbjct: 141 SLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTV 200
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
MI YA +G KEA + M++E KP T V +L+ACAS GAL+ W + R+
Sbjct: 201 MIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK---WVKR-VHRHA 256
Query: 263 FLSNPVL----GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ L GT L+ MYAK G + A VF MK +D V WN ++ + +G A+
Sbjct: 257 LDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAY 316
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
+F Q++ G +P+ F+ +L C AG ++ ++ + L + +V +
Sbjct: 317 DLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRH-ALDSGLEVDVRVGTALVHM 375
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
+SG +D+A + M + N + W A+++G LA+H L Q
Sbjct: 376 YSKSGSIDDARVVFDRMKVR-NVVSWNAMISG--------LAQHGLGQ 414
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 160/314 (50%), Gaps = 8/314 (2%)
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
L EAI + L RGL DSF V VL C + DL AK +H + ++ +N V
Sbjct: 8 TLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMN 67
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+L+ +Y +CG +++AR VFD + +K SW++MI GY + ++A+ +F M E ++P
Sbjct: 68 NLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQP 127
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
T + +L ACASL AL+ G + + S+ +GT L+ MY KCG + +A ++F
Sbjct: 128 NAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIF 187
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+ + D + W ++ + +G K A+ + Q+E+ G +PN T+V +L C G +
Sbjct: 188 DNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK 247
Query: 351 -EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW----G 405
R +++ L + +V + +SG +D+A + M + + + W G
Sbjct: 248 WVKRVHRHALDAGLELDVRVG--TALVQMYAKSGSIDDARVVFDRMKVR-DVVSWNVMIG 304
Query: 406 ALLAGCRLHKKTDL 419
A R H+ DL
Sbjct: 305 AFAEHGRGHEAYDL 318
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/554 (44%), Positives = 356/554 (64%), Gaps = 2/554 (0%)
Query: 53 HSLIVKAG--LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ ++ G L + K + L C ++ A ++F I + N+ +W +I GY
Sbjct: 60 HAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESE 119
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
N A+ ++R++ ++PD+ + +L A +L D+ + +H G VFV
Sbjct: 120 NPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQN 179
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+LV +YA CG+ E A ++F+ M E+++V+W+S+I GYA NG P EAL +F M ++P
Sbjct: 180 TLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEP 239
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ +TMV +LSACA LGAL LG A +M + N G L+D+YAKCG + QA KVF
Sbjct: 240 DGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVF 299
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
EM++K V W +++ GL++NG+ K A +F +LE+ G+ P+ TFVG+L C+H G+VD
Sbjct: 300 DEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVD 359
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
EG +F M + + P IEHYGCMVDLLGR+G + +AHE I++MPM+PNA+VW LL
Sbjct: 360 EGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGA 419
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
C +H L E QL+ LEP +SG+YVLLSN+Y++ +W+D K+R M +G++K
Sbjct: 420 CTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTP 479
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
G S VE+ +HEF++GD SHP +E+IY KL E+ LK G+VP +VL DIEEEEK+
Sbjct: 480 GHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEEEEKE 539
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L+ HSEK+A+AF LI TA IR+ KNLRVC DCH AIKLISK+ REI+VRD +RF
Sbjct: 540 TALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVRDRSRF 599
Query: 591 HCFIEGSCSCKDFW 604
H F +G CSCKD+W
Sbjct: 600 HHFKDGHCSCKDYW 613
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 198/335 (59%), Gaps = 6/335 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+ ++ A+E Y M P T+PF+LKA A+ D + G + HS+ ++ G
Sbjct: 111 MIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNG 170
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV+ +L+++Y CG+ A K+F+ + ++N+V+W ++I+GY G EA+ +FR
Sbjct: 171 FESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFR 230
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ RG++PD F++V +L+AC +LG L+ + H Y+ + G N+ +L+DLYAKCG
Sbjct: 231 EMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCG 290
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ +A +VFD+M EK +VSW+S+I G A NGF KEAL++F ++R+ L P T VGVL
Sbjct: 291 SIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLY 350
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G ++ G M + E+ P + ++D+ + G + QA + + M +
Sbjct: 351 ACSHCGMVDEGFDYFKRM-KEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPN 409
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
VVW ++ +++G+ +A G + + ++P
Sbjct: 410 AVVWRTLLGACTIHGH--LALGEVARAQLLQLEPK 442
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/614 (41%), Positives = 366/614 (59%), Gaps = 43/614 (7%)
Query: 22 RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYL 81
R L NFT PF LK QL H+ ++K + + ++
Sbjct: 16 RPSTHLLHNFTSPFELK--------QL----HAHLLKTNSPLSSLPLSRVASVCAFNSSF 63
Query: 82 ADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
+ A +F + V W + + + +AI++F RL + PD ++ VL AC
Sbjct: 64 SYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKAC 123
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV--- 198
++L D+ K +HGYV + G N+F+ +V LYA CG + AR+VFD+MP++D++
Sbjct: 124 SRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWN 183
Query: 199 ----------------------------SWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
SW+SMI GYA G KEA+D+F M+ L P
Sbjct: 184 IMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLP 243
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
T+V VL ACA +G L LG F R+ + N + TLIDMY KCG + AC++F
Sbjct: 244 NEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIF 303
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M+++ V W+A+++GL+ +G + A +F ++ G++PN TF+G+L C+H G+V+
Sbjct: 304 DNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVE 363
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+GR++F SM+R + + P IEHYGCMVDL R+G L EAHE I +MP+ PN +VWGALL G
Sbjct: 364 KGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
C++HK LAE L L+P N G YV+LSNIY+ + +W D A++R +M D+G++K
Sbjct: 424 CKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTP 483
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
G S + V+GVV+ F+ GD++HP +E+I+ ++L ++K G+VP T VL D+EE++K+
Sbjct: 484 GWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKE 543
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
FL HSEKLA+ FGLI T P VIRI KNLRVC DCH A+K+IS ++ REI+VRD NRF
Sbjct: 544 KFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRF 603
Query: 591 HCFIEGSCSCKDFW 604
HCF GSCSC D+W
Sbjct: 604 HCFKNGSCSCGDYW 617
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 186/358 (51%), Gaps = 33/358 (9%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
+R F D AI + +R P ++T FVLKAC+R D + G H + K GL
Sbjct: 85 LRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGL 144
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFD-------------------------------D 90
+ F++ +++LY CG + A KVFD +
Sbjct: 145 QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAE 204
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+P++NV SWT++I GY G +EAI++F + GL P+ ++V VL AC +G+L
Sbjct: 205 MPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLG 264
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ IH + N +G +N+ V +L+D+Y KCG +E A R+FD M E+ +VSWS+MI G A++
Sbjct: 265 RRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAH 324
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G ++AL +F M +KP T +G+L AC+ +G +E G + M R+ + +
Sbjct: 325 GRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEH 384
Query: 271 T-TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
++D++++ G + +A + M + VVW A++ G ++ +K+A L K
Sbjct: 385 YGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSK 442
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 34/296 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + AI+ + M + G LP T VL ACA + LG R H ++G
Sbjct: 216 MIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSG 275
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + V +L+++YV CG L DA ++FD++ ++ VVSW+A+I+G G E+A+ +F
Sbjct: 276 YEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFN 335
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++++ G+KP++ + + +L AC+ +G + KGR F + +
Sbjct: 336 KMINTGVKPNAVTFIGILHACSHMGMVE-------------KGRKYFASMT--------- 373
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
R + +P I + M+ ++ G +EA + NM + P +L
Sbjct: 374 ------RDYGIVPR--IEHYGCMVDLFSRAGLLQEAHEFIMNMP---IAPNGVVWGALLG 422
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
C ++L A+ + + + L++ L ++YA+ GR +V + M+D+
Sbjct: 423 GCKVHKNIKLAEEATRHLSKLDPLNDGYY-VVLSNIYAEAGRWEDVARVRKLMRDR 477
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/571 (42%), Positives = 368/571 (64%), Gaps = 3/571 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+LK C + G H+L++ + D ++ +LLNLY CG L A K+FD++ ++
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG--DLSTAKWI 153
VV+WTA+I+GY ++A+ + +L GLKP+ F++ +L A + +G D+ + +
Sbjct: 81 VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
HG G NV+V+ +++D+YA+C ++E+A+ +FD M K+ VSW+++I GYA G
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200
Query: 214 KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
+A +F NM REN+KP ++T VL ACAS+G+LE G W + M + +G TL
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260
Query: 274 IDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+DMYAK G + A KVF + +D V WN++++G S +G KVA F ++ + I PN
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPND 320
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
TF+ +L C+HAGL+DEGR +F+ M + +++ P I HY MVDLLGR+G LD A + I
Sbjct: 321 ITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFIS 379
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWND 453
MP++P A VWGALL CR+HK +L + + L+ G +VLL NIY+ + +WND
Sbjct: 380 EMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWND 439
Query: 454 AAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF 513
AAK+R MM + G++K CSWVE++ VH F+ D++HP +I++ ++++ K+K G+
Sbjct: 440 AAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGY 499
Query: 514 VPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKL 573
VP + HVL ++++E++ L HSEKLALAF L+ T P IRI KN+R+CGDCH A K
Sbjct: 500 VPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKF 559
Query: 574 ISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+SK+ REIIVRD NRFH F +G+CSC+D+W
Sbjct: 560 VSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 168/314 (53%), Gaps = 3/314 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACA--REHDFQLGVRSHSLIVK 58
+I G+ +D Q A+ M G P FT +LKA + D G + H L ++
Sbjct: 87 LITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLR 146
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
G D + +V ++L++Y C +L +A +FD + KN VSW A+I+GY +G ++A +
Sbjct: 147 YGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCL 206
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F +L +KP F+ VL AC +G L KW+H + + G+ FV +L+D+YAK
Sbjct: 207 FSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAK 266
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G++E A++VFD++ ++D+VSW+SM+ GY+ +G K AL F M R + P T + V
Sbjct: 267 SGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCV 326
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L+AC+ G L+ G M++ T++D+ + G + +A + EM K
Sbjct: 327 LTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPT 386
Query: 299 -VVWNAVVSGLSMN 311
VW A++ M+
Sbjct: 387 AAVWGALLGACRMH 400
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/585 (43%), Positives = 369/585 (63%), Gaps = 10/585 (1%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
+RN+ LP+ +F +L++CA + QLG H I+K G + D ++T LL+ Y G
Sbjct: 2 LRND-VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
L A +VF +P ++VV+ A+IS G +EEA N+F + R +S S ++T
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITC 116
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM-PEKDIVS 199
+LGD+++A+ + + ++V +++D Y K + A+ +F M ++ V+
Sbjct: 117 YCKLGDINSARLMF----DCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVT 172
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W++MI Y G A+ MF MQ EN+KP TMV +LSACA LGAL++G W ++
Sbjct: 173 WNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIR 232
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
+ VLG LIDMY KCG + A VF + K+ WN+++ GL MNG + A
Sbjct: 233 TKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIA 292
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
F +EK GI+P+G TFVG+L GC+H+GL+ G+++F+ M V+ L P +EHYGCMVDLL
Sbjct: 293 AFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLL 352
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
GR+G L EA ELI++MPM+PN++V G+LL C++HK T L E V QL+ L+P + GNYV
Sbjct: 353 GRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYV 412
Query: 440 LLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYS 499
LSN+Y++ +W+D R +M +G+ K GCS +EV+ +VHEF+ GD SHP +I +
Sbjct: 413 FLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINA 472
Query: 500 KLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAK 559
LDE+A +LK G VP T +VL DIEEEEK+ + HSE++A+AFGL++T P IR+ K
Sbjct: 473 FLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVK 532
Query: 560 NLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
NLR C DCH A+KLIS REIIVRD RFH F GSCSC D+W
Sbjct: 533 NLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 22/315 (6%)
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+L + P S +L +C G+ + H + + G ++ + T L+D YAK G+
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
++ A+RVF MP +D+V+ ++MI + +G+ +EA ++F NM N + +M+
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERN-SCSWNSMITCYCK 119
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGT----TLIDMYAKCGRMAQACKVFREMKD-K 296
+ + L F NPV +ID Y K ++ A ++F M +
Sbjct: 120 LGDINSARL-----------MFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSAR 168
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ V WN ++S G A +F Q++ ++P T V LL C H G +D G ++
Sbjct: 169 NSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMG-EWI 227
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+ R L + ++D+ + G L+ A ++ + N W +++ G ++ +
Sbjct: 228 HGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLS-RKNIFCWNSIIVGLGMNGR 286
Query: 417 TDLAEHVLNQLIALE 431
E + I +E
Sbjct: 287 ---GEEAIAAFIVME 298
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 5/207 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI +V F AI + M++E PT T +L ACA +G H I
Sbjct: 176 MISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKR 235
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D + +L+++Y CG L A+ VF + KN+ W +II G G EEAI F
Sbjct: 236 LKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFI 295
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+KPD + V +L+ C+ G LS ++ + G V +VDL +
Sbjct: 296 VMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRA 355
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQG 206
G +++A + MP K +SM+ G
Sbjct: 356 GYLKEALELIRAMPMKP----NSMVLG 378
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/604 (41%), Positives = 370/604 (61%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V ++ + A+E M+ G P FT LKACA +LG + HS ++K
Sbjct: 330 VIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMD 389
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D FV L+++Y C L DA F+ +P+K++++W AIISGY EA+++F
Sbjct: 390 MESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFV 449
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ + ++ +L + L + + +HG ++G +++V SL+D Y KC
Sbjct: 450 EMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCS 509
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A R+F++ D+VS++SMI YA G +EAL +F MQ LKP+ + +L+
Sbjct: 510 HVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLN 569
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+L A E G + + F+ + G +L++MYAKCG + A + F E+ ++ V
Sbjct: 570 ACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVS 629
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ GL+ +G+ + A +F Q+ K G+ PN T V +L C HAGLV E + +F SM
Sbjct: 630 WSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESME 689
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+F PM EHY CM+DLLGR+G+++EA EL+ MP E NA VWGALL R+HK +L
Sbjct: 690 ELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELG 749
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
L LEP SG +VLL+NIY+++ KW + A++R +M D ++K G SW+EV
Sbjct: 750 RRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDK 809
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V+ FLVGD SH S++IY+KLDEL+ + AG+VP + L D+E+ EK+ L HSEKL
Sbjct: 810 VYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKL 869
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI T IR+ KNLRVC DCH A K I KI REIIVRD NRFH F +GSCSC
Sbjct: 870 AVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSC 929
Query: 601 KDFW 604
D+W
Sbjct: 930 GDYW 933
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 150/503 (29%), Positives = 252/503 (50%), Gaps = 40/503 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N A+ ++ M G FTF VLKAC+ D ++G + H ++V +G
Sbjct: 128 LISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSG 187
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+ +Y C D+ ++FD+IP++NVVSW A+ S Y+ EA+ +F
Sbjct: 188 FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFY 247
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+KP+ FS+ ++ ACT L D S K IHGY+ + G + F A +LVD+YAK G
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVG 307
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A VF+++ + DIVSW+++I G + ++AL++ M+R + P +T+ L
Sbjct: 308 DLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALK 367
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA +G ELG S + + + S+ + L+DMY+KC + A F + +KD +
Sbjct: 368 ACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIA 427
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS-- 358
WNA++SG S A +F ++ K GI N T +L +V RQ
Sbjct: 428 WNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSV 487
Query: 359 ----MSRVFSLTPMIEHYG------------------------CMVDLLGRSGQLDEAHE 390
S ++ + +I+ YG M+ + GQ +EA +
Sbjct: 488 KSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALK 547
Query: 391 L---IKSMPMEPNAIVWGALLAGC----RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
L ++ M ++P+ V +LL C + L H+L L+ + +GN L N
Sbjct: 548 LFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIF-AGNS--LVN 604
Query: 444 IYSASHKWNDAAKIRSMMGDKGI 466
+Y+ +DA + S + ++GI
Sbjct: 605 MYAKCGSIDDAGRAFSELTERGI 627
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 212/392 (54%), Gaps = 2/392 (0%)
Query: 19 NSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC 78
N + F PT+ ++ +L C + G++ H+ I K+GL D ++ L+NLY C
Sbjct: 45 NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC 104
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
A K+ D+ + ++VSW+A+ISGY G A+ F + G+K + F+ VL
Sbjct: 105 RNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
AC+ + DL K +HG V +G +VFVA +LV +YAKC ++R+FD++PE+++V
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV 224
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
SW+++ Y F EA+ +FY M +KP +++ +++AC L G ++
Sbjct: 225 SWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYL 284
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ + +P L+DMYAK G +A A VF ++K D V WNAV++G ++ + + A
Sbjct: 285 IKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQAL 344
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
+ GQ+++ GI PN T L C GL + GRQ +S+ ++ + + G +VD+
Sbjct: 345 ELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG-LVDM 403
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ L++A +P E + I W A+++G
Sbjct: 404 YSKCDLLEDARMAFNLLP-EKDLIAWNAIISG 434
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/604 (40%), Positives = 370/604 (61%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF N + A+E M++EG P + T VL A A +G H ++AG
Sbjct: 219 IIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAG 278
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ T+L ++Y CG + A +FD + K VVSW +++ GY+ G E+AI +F
Sbjct: 279 FAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFE 338
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L G+ P +I+ L AC LGDL K++H +V++ G ++ V SL+ +Y+KC
Sbjct: 339 KMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCK 398
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +F+ + + VSW++MI GYA NG EAL+ F M+ +KP+ +TMV V+
Sbjct: 399 RVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIP 458
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A L W + R+ N + T L+DMY+KCG + A K+F + D+ +
Sbjct: 459 ALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVIT 518
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G +G + A +F +++K ++PN T++ ++ C+H+GLVDEG + F SM
Sbjct: 519 WNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMK 578
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + L P ++HYG MVDLLGR+G++ EA + I++MP+ P V+GA+L C++HK ++
Sbjct: 579 QDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVG 638
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L L P G +VLL+NIY+++ KW+ A++R M KG++K GCS VE+
Sbjct: 639 EKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNE 698
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F G +HP S++IY+ L+EL ++KAAG+VP T+ +L D+E++ ++ L HSEKL
Sbjct: 699 VHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKL 757
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL+ T+P I + KNLRVCGDCH A K IS +TGREIIVRD RFH F G CSC
Sbjct: 758 AIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSC 817
Query: 601 KDFW 604
D+W
Sbjct: 818 GDYW 821
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/451 (31%), Positives = 236/451 (52%), Gaps = 7/451 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++G+ N + A+ F MR + P + F ++LK C D + G H ++
Sbjct: 118 MLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNS 177
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ F T ++N+Y C + DA K+FD +P++++VSW II+G+ G ++A+ +
Sbjct: 178 FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVL 237
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G +PDS ++V VL A +G L K IHGY AG + V ++T+L D+Y+KCG
Sbjct: 238 RMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCG 297
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E AR +FD M +K +VSW+SM+ GY NG P++A+ +F M E + P T++ L
Sbjct: 298 SVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 357
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LG LE G + F+++ S+ + +LI MY+KC R+ A +F + + V
Sbjct: 358 ACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVS 417
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G + NG V A F +++ G++P+ T V ++ + + +
Sbjct: 418 WNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLII 477
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R L I +VD+ + G + A +L M + + I W A++ G H A
Sbjct: 478 RS-CLDKNIFVTTALVDMYSKCGAIHMARKLF-DMISDRHVITWNAMIDGYGTHGLGRAA 535
Query: 421 EHVLNQLI--ALEPWNSGNYVLLSNIYSASH 449
+ +++ A+EP + LS I + SH
Sbjct: 536 LDLFDKMKKGAVEP---NDITYLSVISACSH 563
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 55 LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEE 114
L++K GL + +T L++L+ G + +A +VF+ I DK + ++ GY +LE
Sbjct: 71 LVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLET 130
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A+ R+ + +KP ++ +L C DL K IHG + NVF T +V+
Sbjct: 131 ALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVN 190
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+YAKC ++ A ++FD+MPE+D+VSW+++I G++ NGF K+AL++ MQ E +P+ T
Sbjct: 191 MYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSIT 250
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+V VL A A +G L +G + R F + T L DMY+KCG + A +F M
Sbjct: 251 LVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMD 310
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
K V WN+++ G NG + A VF ++ + GI P G T + L C G ++ G+
Sbjct: 311 QKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK- 369
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F + +L I ++ + + ++D A ++ ++ + + W A++ G
Sbjct: 370 FVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH-VSWNAMILG 424
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/607 (41%), Positives = 375/607 (61%), Gaps = 3/607 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+ N+ A+ Y M + G P NFT+PFVLKAC ++G + H+L+V G
Sbjct: 95 MIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGG 154
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D +V S+L++Y G + A VFD + +++ SW ++SG++ G A +F
Sbjct: 155 LEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFG 214
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYA 177
+ G D +++ +L+AC + DL K IHGYV E+G+ N F+ S++D+Y
Sbjct: 215 DMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYC 274
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
C ++ AR++F+ + KD+VSW+S+I GY G +AL++F M P+ T++
Sbjct: 275 NCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVIS 334
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
VL+AC + AL LG S++ + ++ N V+GT LI MYA CG + AC+VF EM +K+
Sbjct: 335 VLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKN 394
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+V+G ++G + A +F ++ G+ P+ F +L C+H+GLVDEG++ F
Sbjct: 395 LPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFY 454
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
M+R +S+ P HY C+VDLLGR+G LDEA+ +I++M ++PN VW ALL+ CRLH+
Sbjct: 455 KMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNV 514
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
LA +L L P YV LSNIY+A +W D +R+++ + ++K S+VE+
Sbjct: 515 KLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVEL 574
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
+ +VH+F VGD SH S+ IY+KL +L +LK AG+ P T VL+D+EEE K+ L HS
Sbjct: 575 NKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHS 634
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
E+LALAF LI T P IRI KNLRVCGDCH IK+ISK+T REII+RD RFH F +G
Sbjct: 635 ERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGL 694
Query: 598 CSCKDFW 604
CSC +W
Sbjct: 695 CSCGGYW 701
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 165/314 (52%), Gaps = 4/314 (1%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAG-LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
+L++ ++ H+ + G L + ++ T L Y CG++ A +FD I K
Sbjct: 28 LLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLK 87
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
N W ++I GY + A+ ++ ++LH G KPD+F+ VL AC L + +H
Sbjct: 88 NSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVH 147
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
V G +V+V S++ +Y K G++E AR VFD+M +D+ SW++M+ G+ NG +
Sbjct: 148 ALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEAR 207
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN---EFLSNPVLGT 271
A ++F +M+R+ + T++ +LSAC + L++G ++ RN + N L
Sbjct: 208 GAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMN 267
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
++IDMY C ++ A K+F ++ KD V WN+++SG G A +FG++ G P
Sbjct: 268 SIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVP 327
Query: 332 NGNTFVGLLCGCTH 345
+ T + +L C
Sbjct: 328 DEVTVISVLAACNQ 341
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%)
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
N L T L YA CG M A +F ++ K+ +WN+++ G + N A ++ ++
Sbjct: 57 NTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKML 116
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
G +P+ T+ +L C L + GR+
Sbjct: 117 HFGQKPDNFTYPFVLKACGDLLLREMGRK 145
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/590 (43%), Positives = 375/590 (63%), Gaps = 13/590 (2%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRS---------HSLIVKAGLDCDEFVKTSLLNLYVHC 78
P + + P LK+ ++ L RS H+ +++ G D F+ LL C
Sbjct: 18 PNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKC 77
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
+ A ++F + NV +TA+I G+++ GN +AI ++ R+LH + PD++ + +L
Sbjct: 78 HAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASIL 137
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE---- 194
AC L + +H + G N V +++LY KCG + ARRVF++MPE
Sbjct: 138 KACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVA 197
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
KD V W++MI G+ N AL+ F MQ EN++P +T+V VLSAC+ LGALE+G W
Sbjct: 198 KDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWV 257
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
S+M + E N +G LI+MY++CG + +A VF EMKD+D + +N ++SGLSMNG
Sbjct: 258 HSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKS 317
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
+ A +F + ++P TFVG+L C+H GLVD G + F+SM+R + + P IEHYGC
Sbjct: 318 RQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGC 377
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWN 434
MVDLLGR G+L+EA++LI++M M P+ I+ G LL+ C++HK +L E V L +
Sbjct: 378 MVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQAD 437
Query: 435 SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLS 494
SG YVLLS++Y++S KW +AA++R+ M + G+QK GCS +EV+ +HEFL+GD HP
Sbjct: 438 SGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRK 497
Query: 495 EKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDV 554
E+IY KL+EL L+ G+ P + VL DIE+ EK++ LA HSE+LA+ +GLI+T P V
Sbjct: 498 ERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTV 557
Query: 555 IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IR+ KNLRVC DCH AIKLI+KIT R+++VRD NRFH F G+CSC D+W
Sbjct: 558 IRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 607
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 200/345 (57%), Gaps = 7/345 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GFVS+ + AI+ Y+ M ++ LP N+ +LKAC + + G HS +K G
Sbjct: 101 LIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLG 160
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD----KNVVSWTAIISGYINEGNLEEAI 116
L + V+ ++ LY CG L DA +VF+++P+ K+ V WTA+I G++ + A+
Sbjct: 161 LSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRAL 220
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
FR + ++P+ F+IV VL+AC+QLG L +W+H Y+ + N+FV +L+++Y
Sbjct: 221 EAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMY 280
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
++CG++++A+ VFD+M ++D++++++MI G + NG ++A+++F M L+P T V
Sbjct: 281 SRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFV 340
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGT-TLIDMYAKCGRMAQACKVFREMK- 294
GVL+AC+ G ++ G M R+ + + ++D+ + GR+ +A + R MK
Sbjct: 341 GVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKM 400
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
D ++ ++S M+ +++ V LE G Q + T+V L
Sbjct: 401 TPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRG-QADSGTYVLL 444
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/604 (42%), Positives = 367/604 (60%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ +V N+CF+ +++ ++ MR GF P NFTF VLKAC F +G H K
Sbjct: 217 MVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTS 276
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV L++LY+ G + DAL+VF+++P +V+ W+ +I+ Y EEAI MF
Sbjct: 277 YLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFC 336
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ + P+ F++ +L AC L DL IH +V + G NVFV+ +L+D+YAKCG
Sbjct: 337 RMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCG 396
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
ME + ++F + P VSW+++I GY G ++AL +F +M ++ T VL
Sbjct: 397 RMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLR 456
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA + ALE G S + + N V+G LIDMYAKCG + A VF +++ DQV
Sbjct: 457 ACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVS 516
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++SG S++G A F + + +P+ TFVG+L C++AGL+D G+ +F SM
Sbjct: 517 WNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMV 576
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P EHY CMV LLGRSG LD+A +L+ +P EP+ +VW ALL+ C +H +L
Sbjct: 577 EEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELG 636
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+++ +EP + +VLLSNIY+ + +W + A IR+ M KGI+K G SW+E G
Sbjct: 637 RISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGR 696
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F VGD SHP ++ I L+ L K + G+VP VL D+E+ +K+ L HSE+L
Sbjct: 697 VHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERL 756
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
ALA+GLI T +RI KNLR+C DCH AIKLISKI R+II+RD NRFH F EG CSC
Sbjct: 757 ALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSC 816
Query: 601 KDFW 604
D+W
Sbjct: 817 GDYW 820
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 219/415 (52%), Gaps = 4/415 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+G+ F AI ++ ++ EG F F VLK +LG H+ + K G
Sbjct: 116 LIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLG 175
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FV T+L++ Y CGY A +VFD I K++VSWT +++ Y+ EE++ +F
Sbjct: 176 FDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFS 235
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G KP++F+ VL AC L + K +HG + +FV L+DLY K G
Sbjct: 236 RMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSG 295
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A +VF++MP+ D++ WS MI YA + +EA++MF M+R + P +T+ +L
Sbjct: 296 DVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQ 355
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL L+LG + + N + L+DMYAKCGRM + ++F E + V
Sbjct: 356 ACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVS 415
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SM 359
WN V+ G G + A +F + +C +Q T+ +L C ++ G Q + S+
Sbjct: 416 WNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSV 475
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ ++ + ++D+ + G + +A L+ M E + + W A+++G +H
Sbjct: 476 KTIYDKNTVVGN--ALIDMYAKCGNIKDA-RLVFDMLREHDQVSWNAMISGYSVH 527
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 188/389 (48%), Gaps = 13/389 (3%)
Query: 30 NFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFD 89
+ + +L++C R D G H I+K G D F LLN YV L DA K+FD
Sbjct: 44 TYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFD 103
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG--LKPDSFSIVRVLTACTQLGDL 147
++PD+N VS+ +I GY EAI +F RL G L P FS V L + L
Sbjct: 104 EMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKL 163
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ +H V + G + FV T+L+D Y+ CG E AR+VFD + KD+VSW+ M+ Y
Sbjct: 164 GFS--VHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACY 221
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
N +E+L +F M+ KP +T VL AC L +G + +L
Sbjct: 222 VENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEEL 281
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+G LID+Y K G + A +VF EM D + W+ +++ + + + A +F ++ +
Sbjct: 282 FVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRG 341
Query: 328 GIQPNGNTFVGLLCGCTHAGLVD--EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
+ PN T LL C A LVD G Q + +V L + ++D+ + G++
Sbjct: 342 LVLPNQFTLASLLQAC--ASLVDLQLGNQIHCHVVKV-GLDMNVFVSNALMDMYAKCGRM 398
Query: 386 DEAHELIKSMP----MEPNAIVWGALLAG 410
+ + +L P + N ++ G + AG
Sbjct: 399 ENSLQLFSESPNCTDVSWNTVIVGYVQAG 427
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 145/290 (50%), Gaps = 2/290 (0%)
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+R H + +++ +L +C + GD +T K++H + + G ++F L++ Y K
Sbjct: 33 QRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKY 92
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A ++FD+MP+++ VS+ ++IQGY+ EA+ +F +Q E + + VL
Sbjct: 93 DSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVL 152
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
S +LG + + + F S+ +GT LID Y+ CG A +VF ++ KD V
Sbjct: 153 KLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMV 212
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W +V+ N + + +F ++ G +PN TF +L C + + G+
Sbjct: 213 SWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCA 272
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ L + ++DL +SG +D+A ++ + MP + + I W ++A
Sbjct: 273 FKTSYLEELFVGVE-LIDLYIKSGDVDDALQVFEEMPKD-DVIPWSFMIA 320
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/603 (42%), Positives = 370/603 (61%), Gaps = 8/603 (1%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
+ F + QH ++ + S P+N + + +L++C + G + H+ + + G+
Sbjct: 36 QSFATQLIPQHKVDSFPSS------PSNHYYYASLLESCISAKALEPGKQLHARLCQLGI 89
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ + T L+N Y C L +A +FD IP N+ W +I Y G E AI+++ +
Sbjct: 90 AYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQ 149
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+L GLKPD+F++ VL AC+ L + + IH V +G R+VFV +LVD+YAKCG
Sbjct: 150 MLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGC 209
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ AR VFD++ ++D V W+SM+ YA NG P E+L + M + ++P T+V V+S+
Sbjct: 210 VVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISS 269
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
A + L G F R+ F N + T LIDMYAKCG + AC +F +++K V W
Sbjct: 270 SADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSW 329
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA+++G +M+G A +F ++ K QP+ TFVG L C+ L+DEGR +N M R
Sbjct: 330 NAIITGYAMHGLAVEALDLFERMMK-EAQPDHITFVGALAACSRGRLLDEGRALYNLMVR 388
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+ P +EHY CMVDLLG GQLDEA++LI+ M + P++ VWGALL C+ H +LAE
Sbjct: 389 DCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAE 448
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
L +LI LEP +SGNYV+L+N+Y+ S KW A++R +M DKGI+K CSW+EV V
Sbjct: 449 VALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKV 508
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
+ FL GD SHP S IY++L L ++ AG+VP T V D+EE+EK + HSE+LA
Sbjct: 509 YAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLA 568
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+AFGLI+T P + I KNLR+C DCH AIK ISKIT REI VRD NR+H F G CSC
Sbjct: 569 IAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCG 628
Query: 602 DFW 604
D+W
Sbjct: 629 DYW 631
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 193/340 (56%), Gaps = 5/340 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + N + AI Y+ M G P NFT PFVLKAC+ G H ++++G
Sbjct: 130 LIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSG 189
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+++Y CG + DA VFD I D++ V W ++++ Y G+ +E++++
Sbjct: 190 WERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCC 249
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +G++P ++V V+++ + L + IHG+ G N V T+L+D+YAKCG
Sbjct: 250 EMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCG 309
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A +F+++ EK +VSW+++I GYA +G EALD+F M +E +P++ T VG L+
Sbjct: 310 SVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALA 368
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKD-KD 297
AC+ L+ G + M R+ + NP + T ++D+ CG++ +A + R+M D
Sbjct: 369 ACSRGRLLDEGRALYNLMVRDCRI-NPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPD 427
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
VW A+++ +G V++A +L + +GN +
Sbjct: 428 SGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVI 467
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/636 (39%), Positives = 369/636 (58%), Gaps = 39/636 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + S+ ++ + M G P + FP VLK+CA D LG H I++ G
Sbjct: 77 VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136
Query: 61 LDCDEFVKTSLLNLYVHCGYLADA--------------------------------LKVF 88
LD D + +L+N+Y +L ++ K+F
Sbjct: 137 LDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIF 196
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+ +P+K++VSW II+G G EE + M R + LKPDSF++ VL + D+S
Sbjct: 197 EMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDIS 256
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K IHG G +++VA+SL+D+YAKC + + RVF + E+D +SW+S+I G
Sbjct: 257 RGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCV 316
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
NG E L F M +KP+ Y+ ++ ACA L L LG ++ RN F N
Sbjct: 317 QNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIF 376
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ ++L+DMYAKCG + A ++F M+ +D V W A++ G +++G A +F Q+E G
Sbjct: 377 IASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG 436
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
I+ +L C+H GLVDE ++FNSM+R F + P +EHY + DLLGR+G+L+EA
Sbjct: 437 IK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 489
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
++ I M + P +W LL+ CR+HK D+AE V N+++ ++P N+G Y+LL+NIYSA+
Sbjct: 490 YDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAA 549
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
+W +AAK R+ M GI+K CSW+EV V+ F+ GD SHP EKI ++ L +
Sbjct: 550 RRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELM 609
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
+ G+VP T V D+EEE+K+Y + HSE+LA+ FG+I T IR+ KNLRVC DCH
Sbjct: 610 EKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCH 669
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A K ISKI GREI+VRDN+RFH F G+CSC D+W
Sbjct: 670 TATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 184/386 (47%), Gaps = 34/386 (8%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y H L D+L++F+ I ++W ++I Y + G +++ F +L GL PD
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA-------- 185
VL +C L DL+ + +HGY+ G +++ +L+++Y+K +E++
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 186 ------------------------RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
R++F+ MPEKD+VSW+++I G A NG +E L M
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
M NLKP+ +T+ VL A + G R ++ + ++LIDMYAKC
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
R+A +C+VF + ++D + WN++++G NG F Q+ I+P +F ++
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C H + G+Q ++R I +VD+ + G + A ++ M + +
Sbjct: 349 ACAHLTTLHLGKQLHGYITR-NGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DM 406
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQL 427
+ W A++ GC LH + A + Q+
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQM 432
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/577 (42%), Positives = 356/577 (61%), Gaps = 1/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT + +L++C + G + H+ + AG D + T L+NLY C L+ A +
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD IP N+ W +I GY G E A+ ++ ++ GL PD+F+ VL AC L +
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ IH +V + G ++VFV +L+D+YAKCG + AR VFD++ +D V W+SM+ Y
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAY 252
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+ NG P L + M L+P T+V +SA A AL G R EF S+
Sbjct: 253 SQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHD 312
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ T L+DMYAKCG + A +F + K V WNA+++G +M+G+ A +F ++ +
Sbjct: 313 KVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRV 372
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+P+ TFVG+L C+H GL++EG FF +M R + + P ++HY CMVDLLG SG+LDE
Sbjct: 373 A-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDE 431
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A+ LI M + P++ VWGALL C++H +L E L +LI LEP ++GNYV+LSNIY+
Sbjct: 432 AYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQ 491
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ KW AK+R +M D+ ++K CSW+EV VH FL GD SHPLS++IYS+L+ +
Sbjct: 492 AGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGL 551
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
+K AG+ P+T V D+E++EK + HSE+LA+AFGLI+T P + I KNLR+C DC
Sbjct: 552 MKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDC 611
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H AIK ISKIT REI VRD NR+H F +G CSC D+W
Sbjct: 612 HVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 181/319 (56%), Gaps = 5/319 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ N ++ A++ Y M + G +P NFTFPFVLKACA + G H +V+ G
Sbjct: 147 LIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTG 206
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+++Y CG + A +VFD I ++ V W ++++ Y G+ + +++
Sbjct: 207 WEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCS 266
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ GL+P ++V ++A L + +HG + V T+LVD+YAKCG
Sbjct: 267 EMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCG 326
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR +F+++ K +VSW++MI GYA +G EALD+F M R KP++ T VGVLS
Sbjct: 327 SVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLS 385
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKD-KD 297
AC+ G LE G M R ++ +P + T ++D+ GR+ +A + +MK D
Sbjct: 386 ACSHGGLLEEGWMFFETMIR-DYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPD 444
Query: 298 QVVWNAVVSGLSMNGYVKV 316
VW A+++ ++ V++
Sbjct: 445 SGVWGALLNSCKIHANVEL 463
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 148/289 (51%), Gaps = 4/289 (1%)
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
L P + +L +C + K +H V AG G + +AT LV+LY C ++ AR
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
+FD++P+ +I W+ +I+GYA NG + A+ ++Y M L P+ +T VL ACA+L
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
A+E G + + + + +G LIDMYAKCG + A +VF ++ +D V+WN++++
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLA 250
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SMSRVFSL 365
S NG+ + ++ G++P T V + + +GR+ S + F
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFES 310
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ +VD+ + G + A L + + ++ + W A++ G +H
Sbjct: 311 HDKVK--TALVDMYAKCGSVRVARNLFERLGVK-RVVSWNAMITGYAMH 356
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/604 (40%), Positives = 367/604 (60%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N + A++ M+ G P + T VL A A ++G H +AG
Sbjct: 214 VVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAG 273
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V T++L+ Y CG + A VF + +NVVSW +I GY G EEA F
Sbjct: 274 FEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFL 333
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L G++P + S++ L AC LGDL +++H ++E G +V V SL+ +Y+KC
Sbjct: 334 KMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCK 393
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A VF + K +V+W++MI GYA NG EAL++F MQ ++KP+ +T+V V++
Sbjct: 394 RVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVIT 453
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A L W R N + T LID +AKCG + A K+F M+++ +
Sbjct: 454 ALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVIT 513
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G NG+ + A +F +++ ++PN TF+ ++ C+H+GLV+EG +F SM
Sbjct: 514 WNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMK 573
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L P ++HYG MVDLLGR+G+LD+A + I+ MP++P V GA+L CR+HK +L
Sbjct: 574 ENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELG 633
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E ++L L+P + G +VLL+N+Y+++ W+ A++R+ M KGIQK GCS VE+
Sbjct: 634 EKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNE 693
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F G +HP S++IY+ L+ L ++KAAG+VP T+ + D+EE+ K+ L+ HSE+L
Sbjct: 694 VHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSI-HDVEEDVKEQLLSSHSERL 752
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL+ T I I KNLRVCGDCHEA K IS +TGREIIVRD RFH F G CSC
Sbjct: 753 AIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSC 812
Query: 601 KDFW 604
D+W
Sbjct: 813 GDYW 816
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 138/449 (30%), Positives = 225/449 (50%), Gaps = 43/449 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++G+ N + A+ FY MR + +P + F ++L+ D + G H +++ G
Sbjct: 113 MLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNG 172
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ F T+++NLY C + DA K+F+ +P +++VSW +++GY G A+ +
Sbjct: 173 FQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVL 232
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G KPDS ++V VL A L L + IHGY AG V VAT+++D Y KCG
Sbjct: 233 QMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCG 292
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR VF M +++VSW++MI GYA NG +EA F M E ++P +M+G L
Sbjct: 293 SVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALH 352
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+LG LE G + ++ + + + +LI MY+KC R+ A VF +K K V
Sbjct: 353 ACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVT 412
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC----------------- 343
WNA++ G + NG V A +F +++ I+P+ T V ++
Sbjct: 413 WNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAI 472
Query: 344 ----------------THA--GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
THA G + R+ F+ M +T + M+D G +G
Sbjct: 473 RTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVIT-----WNAMIDGYGTNGHG 527
Query: 386 DEAHELIKSM---PMEPNAIVWGALLAGC 411
EA +L M ++PN I + +++A C
Sbjct: 528 REALDLFNEMQNGSVKPNEITFLSVIAAC 556
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 212/426 (49%), Gaps = 25/426 (5%)
Query: 55 LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEE 114
LI+K G + +T L++L+ + +A +VF+ + K V + ++ GY L +
Sbjct: 66 LIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRD 125
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A+ + R+ + P + +L + DL + IHG V G N+F T++V+
Sbjct: 126 AVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVN 185
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
LYAKC +E A ++F++MP++D+VSW++++ GYA NGF + A+ + MQ KP+ T
Sbjct: 186 LYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSIT 245
Query: 235 MVGVLSACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+V VL A A L AL +G + +F E++ N + T ++D Y KCG + A VF+
Sbjct: 246 LVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVN--VATAMLDTYFKCGSVRSARLVFKG 303
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M ++ V WN ++ G + NG + AF F ++ G++P + +G L C + G ++ G
Sbjct: 304 MSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERG 363
Query: 353 R---QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
R + + F ++ M ++ + + ++D A + ++ + W A++
Sbjct: 364 RYVHRLLDEKKIGFDVSVM----NSLISMYSKCKRVDIAASVFGNLK-HKTVVTWNAMIL 418
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWN--SGNYVLLSNIYSASH-------KWNDAAKIRSM 460
G + + LN ++ + ++ L+S I + + KW IR++
Sbjct: 419 G---YAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTL 475
Query: 461 MGDKGI 466
M DK +
Sbjct: 476 M-DKNV 480
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/606 (41%), Positives = 376/606 (62%), Gaps = 6/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GFV+N A E + MR EG T F V+K CA + + H ++K G
Sbjct: 265 MIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNG 324
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-KNVVSWTAIISGYINEGNLEEAINMF 119
D D +KT+L+ Y C + DA K+F + +NVVSWTAIISGY+ G + A+N+F
Sbjct: 325 SDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLF 384
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G++P+ F+ +LTA + + IH V + + V T+L D Y+K
Sbjct: 385 CQMRREGVRPNHFTYSTILTANAAV----SPSQIHALVVKTNYENSPSVGTALSDSYSKI 440
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+ +A ++F+ + EKDIV+WS+M+ GYA G + A+ +F + +E ++P +T VL
Sbjct: 441 GDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVL 500
Query: 240 SACAS-LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+ACA+ ++E G S ++ F + + + L+ MYAK G + A +VF+ D+D
Sbjct: 501 NACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDL 560
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WN+++SG + +G K + +F ++ ++ +G TF+G++ CTHAGLV+EG+++F+
Sbjct: 561 VSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDL 620
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + + + P +EHY CMVDL R+G L++A +LI MP A +W LLA CR+H
Sbjct: 621 MVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQ 680
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E +LI+L+P +S YVLLSNIY+ + W + AK+R +M K ++K G SW+EV
Sbjct: 681 LGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVK 740
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
F+ GD SHP S++IY KL+EL+ +LK AG+ P T +VL D+EEE K+ L+ HSE
Sbjct: 741 NKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSE 800
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LA+AFGLI T P I+I KNLRVCGDCH IKLISKI GR+I+VRD+NRFH F GSC
Sbjct: 801 RLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSC 860
Query: 599 SCKDFW 604
SC D+W
Sbjct: 861 SCGDYW 866
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 235/417 (56%), Gaps = 10/417 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N + A++ ++ M+ EG P FTF VL A + + GV+ H++++K+G
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD FV S++N+Y ++DA VFD + ++N VSW ++I+G++ G EA +F
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+K V+ C + ++S AK +H V + G ++ + T+L+ Y+KC
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343
Query: 181 NMEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A ++F M +++VSW+++I GY NG A+++F M+RE ++P ++T +L
Sbjct: 344 EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTIL 403
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+A A++ ++ + + + + ++P +GT L D Y+K G +A K+F + +KD V
Sbjct: 404 TANAAVSPSQI----HALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIV 459
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH-AGLVDEGRQFFN- 357
W+A++SG + G ++ A +F QL K G++PN TF +L C V++G+QF +
Sbjct: 460 AWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSC 519
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
S+ FS + +V + + G ++ A+E+ K ++ + + W ++++G H
Sbjct: 520 SIKSGFSNALCVS--SALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMISGYAQH 573
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 201/407 (49%), Gaps = 7/407 (1%)
Query: 5 FVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCD 64
F ND + A+ + +R G + VLK C D +G + H +K G D
Sbjct: 67 FSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVED 126
Query: 65 EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
V TSL+++Y+ + D +VFD++ KNVVSWT++++GY G E+A+ +F ++
Sbjct: 127 VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQL 186
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G+KP+ F+ VL G + +H V ++G +FV S+V++Y+K +
Sbjct: 187 EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSD 246
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
A+ VFD M ++ VSW+SMI G+ +NG EA ++FY M+ E +K V+ CA+
Sbjct: 247 AKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCAN 306
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV-WNA 303
+ + + +N + + T L+ Y+KC + A K+F M VV W A
Sbjct: 307 IKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTA 366
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
++SG NG A +F Q+ + G++PN T+ +L T V + + +
Sbjct: 367 IISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTIL---TANAAVSPSQIHALVVKTNY 423
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+P + + D + G +EA ++ + + E + + W A+L+G
Sbjct: 424 ENSPSVG--TALSDSYSKIGDANEAAKIFELID-EKDIVAWSAMLSG 467
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 175/342 (51%), Gaps = 1/342 (0%)
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
++FD+ P + + ++ + +EA+N+F L G D S+ VL C L
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D K +H + G +V V TSLVD+Y K ++E RVFD+M K++VSW+S++
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GY NG ++AL +F MQ E +KP +T VL A+ GA+E GV + + ++ S
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+G ++++MY+K ++ A VF M++++ V WN++++G NG AF +F ++
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
G++ F ++ C + + +Q + + S + MV + ++
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMV-AYSKCSEI 345
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
D+A +L M N + W A+++G + +TD A ++ Q+
Sbjct: 346 DDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQM 387
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 117/226 (51%), Gaps = 2/226 (0%)
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
++++FD+ P++ + + ++ ++ N KEAL++F ++R + ++ VL C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
L +G + F+ + +GT+L+DMY K + +VF EM+ K+ V W ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
++G NG + A +F Q++ GI+PN TF +L G G V++G Q ++M
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ-VHTMVIKSG 223
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
L I MV++ +S + +A + SM NA+ W +++AG
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAG 268
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/604 (38%), Positives = 368/604 (60%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GF + + EGF P +TF +LK CA + D G H ++K+G
Sbjct: 162 LLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSG 221
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D + SL+N+Y CG A KVF +IP+++VVSWTA+I+G++ EG + +F
Sbjct: 222 INPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFN 280
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L G P+ ++ + +L +C+ L D+ K +H + + N FV T+LVD+YAK
Sbjct: 281 QMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNR 340
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E A +F+++ ++D+ +W+ ++ GYA +G ++A+ F MQRE +KP +T+ LS
Sbjct: 341 FLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLS 400
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C+ + L+ G S + + + + L+DMYAKCG + A VF + +D V
Sbjct: 401 GCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVS 460
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN ++ G S +G A F + G P+ TF+G+L C+H GL++EG++ FNS+S
Sbjct: 461 WNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLS 520
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+++ +TP IEHY CMVD+LGR+G+ E I+ M + N ++W +L C++H +
Sbjct: 521 KIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFG 580
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L LEP NY+LLSN+++A W+D +R++M +G++K GCSWVEV+G
Sbjct: 581 ERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQ 640
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL D SHP +I+ KL +L KL + G+ P TDHVL ++ + EKQ L HSE+L
Sbjct: 641 VHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERL 700
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
ALAF L++T+ + IRI KNLR+CGDCH+ +K IS+IT +E++VRD N FH F GSCSC
Sbjct: 701 ALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSC 760
Query: 601 KDFW 604
++FW
Sbjct: 761 QNFW 764
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 207/404 (51%), Gaps = 3/404 (0%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
Q A++ + MR+ F F ++ A A D G H+ + K G + D + +
Sbjct: 71 LQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNA 130
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
+ +Y+ + + + F + +N+ S ++SG+ + ++ + +LL G +P+
Sbjct: 131 FVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPN 190
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
++ + +L C GDL+ K IHG V ++G + + SLV++YAKCG+ A +VF
Sbjct: 191 MYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFG 250
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
++PE+D+VSW+++I G+ + G+ L +F M E P YT + +L +C+SL ++L
Sbjct: 251 EIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDL 309
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + + +N N +GT L+DMYAK + A +F + +D W +V+G +
Sbjct: 310 GKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQ 369
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+G + A F Q+++ G++PN T L GC+ +D GRQ +SM+ + +
Sbjct: 370 DGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ-LHSMAIKAGQSGDMF 428
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+VD+ + G +++A E++ + + + W ++ G H
Sbjct: 429 VASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTIICGYSQH 471
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 177/355 (49%), Gaps = 3/355 (0%)
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
++K G+ D + +SL+N+YV C L A +V +++P ++V W +S + L+EA
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+ +F + H ++ + F +++A LGD + IH V + G ++ ++ + V +
Sbjct: 75 VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y K ++E + F M +++ S ++++ G+ + + + E +P YT
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+ +L CAS G L G + ++ + L +L+++YAKCG ACKVF E+ +
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+D V W A+++G GY +F Q+ G PN TF+ +L C+ VD G+Q
Sbjct: 255 RDVVSWTALITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + SL +VD+ ++ L++A E I + ++ + W ++AG
Sbjct: 314 HAQIVKN-SLDGNDFVGTALVDMYAKNRFLEDA-ETIFNRLIKRDLFAWTVIVAG 366
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/605 (42%), Positives = 364/605 (60%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI GFV N CF+ +I + M G T VL A A + +LG++ L +K
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G + T L++L+ CG + A +F +I K+++S A+ISG+ G E+++ +F
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ LL G + S +IV ++ + G IHG+ + G + V+T+L +Y +
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
M AR++FD+ EK + SW++MI G NG A+ +F MQ+ N+ P T+ +L
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACA +GAL LG W S ++ N F SN + T LIDMYAKCG + A ++F M +K++V
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEV 300
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG ++G+ + A +F + ++P G TF+ +L C+HAGLV EG F++M
Sbjct: 301 TWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTM 360
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
F P+ EHY CMVD+LGR+GQL +A E IK+MP+EP VWGALL C +HK T+L
Sbjct: 361 VHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNL 420
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A +L L+P N G YVL+SNIYS K+ AA +R + K + K GC+ +E+
Sbjct: 421 AHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQ 480
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V H F GD SHP S+ IY++LD+L K+ AGF T VL D+EEEEK+ + HSEK
Sbjct: 481 VPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEK 540
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI+T P IRI KNLRVC DCH K +SKIT R I+VRD NRFH F +G CS
Sbjct: 541 LAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCS 600
Query: 600 CKDFW 604
C D+W
Sbjct: 601 CGDYW 605
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/604 (42%), Positives = 373/604 (61%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V ++ A++ M + P+ FT LKACA +LG + HS ++K
Sbjct: 260 VIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMD 319
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D FV L+++Y CG L DA VFD +P K+V+ W +IISGY N G EA+++F
Sbjct: 320 MEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFT 379
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GL+ + ++ +L + + +H ++G + +VA SL+D Y KC
Sbjct: 380 NMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCC 439
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E A +VF+ P +D+V+++SMI Y+ G +EAL M+ MQ ++KP+ + + +
Sbjct: 440 LLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFN 499
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+L A E G + + LS+ G +L++MYAKCG + A +F E+ + V
Sbjct: 500 ACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVS 559
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ GL+ +G+ + A +F Q+ K GI PN T V +L C HAGLV E R+FF M
Sbjct: 560 WSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLME 619
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++F +TP EHY CMVD+LGR G+LDEA L+K MP + +A VWGALL R+HK +L
Sbjct: 620 KLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELG 679
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
H L+ LEP SG ++LL+NIY+++ W++ AK+R M + ++K G SW+E+
Sbjct: 680 RHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDK 739
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V+ F+VGD SHP S++IY KLD+L +L +AG+VP + L D+E+ EK+ L HSEKL
Sbjct: 740 VYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKL 799
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI T P IR+ KNLRVC DCH A K ISK+ REIIVRD NRFH F +GSCSC
Sbjct: 800 AVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSC 859
Query: 601 KDFW 604
D+W
Sbjct: 860 GDYW 863
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 220/459 (47%), Gaps = 22/459 (4%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
H + M + G P F+ VL ACA D G++ H ++K G D D F +LL
Sbjct: 171 HRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALL 230
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
++Y G A+ VF +IP ++VSW A+I+G + + A+ + ++ + P F
Sbjct: 231 DMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMF 290
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++ L AC +G + + +H + + + FV L+D+Y+KCG ++ AR VFD M
Sbjct: 291 TLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLM 350
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
P KD++ W+S+I GY++ G+ EA+ +F NM +E L+ T+ +L + A G
Sbjct: 351 PXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTA-------GS 403
Query: 253 WASSFMERNEFLS-------NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
A+ F E+ +S + + +L+D Y KC + A KVF +D V + +++
Sbjct: 404 QANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMI 463
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
+ S G + A ++ +++ I+P+ F L C + ++G+Q + + L
Sbjct: 464 TAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLL 523
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
+ + +V++ + G +D+A + + + W A++ G H A +
Sbjct: 524 SDVFAG-NSLVNMYAKCGSIDDASCIFNEISWR-GIVSWSAMIGGLAQHGHGRKALQLFY 581
Query: 426 QLI--ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMG 462
Q++ + P N++ L ++ SA + + R G
Sbjct: 582 QMLKNGILP----NHITLVSVLSACNHAGLVTEARRFFG 616
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 224/501 (44%), Gaps = 84/501 (16%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+P +L D G+ H+ I++ GL ++ L+NLY C A K+ D
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHARIIRLGL---LGLRNRLVNLYSKCQCFRVARKLVIDSS 109
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRL------------------------------ 122
+ ++VSW+A+ISGY+ G EEA+ + +
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 123 LHR----------GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
+HR G+ P+ FS+ VL AC L D + +HGY+ + G + F A +L
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+D+YAK G E A VF ++P+ DIVSW+++I G + AL + M + P
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+T+ L ACA++G ++LG S + + + + +G LIDMY+KCG + A VF
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDL 349
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL-----------C 341
M KD +VWN+++SG S GY A +F + K G++ N T +L C
Sbjct: 350 MPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFC 409
Query: 342 GCTHAGLVDEGRQF-----------------FNSMSRVFSLTPM--IEHYGCMVDLLGRS 382
H + G Q+ ++VF + P + Y M+ +
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469
Query: 383 GQLDEAHELIKSMP---MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
G +EA ++ M ++P+A ++ +L C +L+ + + I + G
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNAC-----ANLSAYEQGKQIHVHVLKCG--- 521
Query: 440 LLSNIYSASHKWNDAAKIRSM 460
LLS++++ + N AK S+
Sbjct: 522 LLSDVFAGNSLVNMYAKCGSI 542
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/610 (41%), Positives = 364/610 (59%), Gaps = 39/610 (6%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADAL 85
F+ TN + K+ H Q+ H+++ + GLD + L Y G L ++
Sbjct: 27 FISTNRLAVLIDKSKTISHLLQI----HAVLFRHGLDHHPILNFKLQRSYASLGRLDYSV 82
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+F + +V WTAII G+ G E+A+N + ++L +G++P++F+ +L C
Sbjct: 83 ALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP--- 139
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS------ 199
+ K +H + G +++V T L+D+YA+ G++ A+++FD MPEK +VS
Sbjct: 140 -IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLT 198
Query: 200 -------------------------WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
W+ MI GY NG P EAL +F M + KP T
Sbjct: 199 CYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVT 258
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
++ VLSAC LGALE G W S++E N N +GT L+DMY+KCG + A VF ++
Sbjct: 259 VLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID 318
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
DKD V WN+++ G +M+G+ + A +F + + G+ P TF+G+L C H+G V EG
Sbjct: 319 DKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWD 378
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
FN M + + P IEHYGCMV+LLGR+G +++A+EL+K+M +EP+ ++WG LL CRLH
Sbjct: 379 IFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLH 438
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K L E ++ L+ NSG Y+LLSNIY+A W+ A++R+MM D G++K GCS
Sbjct: 439 GKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSS 498
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+EV+ VHEFL G +HP ++IY L+E+ LK+ G+ P TD VL DI E EK+ L
Sbjct: 499 IEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLE 558
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFGLI T P I+I KNLRVC DCHE KLISKITGR+I+VRD NRFH F+
Sbjct: 559 VHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFV 618
Query: 595 EGSCSCKDFW 604
GSCSC D+W
Sbjct: 619 NGSCSCGDYW 628
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 187/353 (52%), Gaps = 41/353 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G + A+ FY M +G P FTF +LK C E G HS VK G
Sbjct: 99 IIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEP----GKALHSQAVKLG 154
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS---------------------- 98
D D +V+T LL++Y G + A ++FD +P+K++VS
Sbjct: 155 FDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFD 214
Query: 99 ---------WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
W +I GY G EA+ +FRR+L KP+ +++ VL+AC QLG L +
Sbjct: 215 GMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALES 274
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+W+H Y+ G NV V T+LVD+Y+KCG++E AR VFD++ +KD+V+W+SMI GYA
Sbjct: 275 GRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAM 334
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+GF +EAL +F +M R L P T +G+LSAC G + G W ++E+ P +
Sbjct: 335 HGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEG-WDIFNKMKDEYGIEPKI 393
Query: 270 G--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFG 319
++++ + G + QA ++ + M + D V+W ++ ++G K+A G
Sbjct: 394 EHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG--KIALG 444
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/604 (41%), Positives = 363/604 (60%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G V N CF +I+ + M +G + T VL A A + ++G+ L +K G
Sbjct: 180 MINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIG 239
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++V T L++LY CG + A +F I +++++ A+ISG+ G E ++ +FR
Sbjct: 240 FGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFR 299
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
LL G + S +IV ++ + G L A IHG+ ++G N V+T+ +Y K
Sbjct: 300 ELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLN 359
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR +FD+ PEK +V+W++MI GY NG + A+ +F M + P T+ +LS
Sbjct: 360 EIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILS 419
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LG+L G W ++ N + T L+DMYAKCG +++A ++F M +K+ V
Sbjct: 420 ACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVT 479
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN ++ G ++GY A ++ ++ G P+ TF+ +L C+HAGLV EG + F++M
Sbjct: 480 WNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMV 539
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P+IEHY CMVD+LGRSGQL++A E IK MP+EP VWG LL C +HK TD+A
Sbjct: 540 NKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIA 599
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+L L+P + G YVLLSNIYS + AA IR ++ + + K GC+ +EV+G
Sbjct: 600 RLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGT 659
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
H F+ GD SH + IY+KL++L K++ G+ T L D+EEEEK+ + HSEKL
Sbjct: 660 PHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKL 719
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLITT P + IRI KNLRVC DCH A K ISKIT R I+VRD NRFH F +G CSC
Sbjct: 720 AIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSC 779
Query: 601 KDFW 604
D+W
Sbjct: 780 GDYW 783
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 229/450 (50%), Gaps = 7/450 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMR-NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++RGF ND +I Y +R N P NFT+ F + AC+ + L + +HS+I
Sbjct: 81 LVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML-LHAHSII--D 137
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G + FV ++L++LY + A KVFD +P+++ V W +I+G + +++I +F
Sbjct: 138 GYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLF 197
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R ++ G++ DS ++ VL A +L +L I + G G +V T L+ LY+KC
Sbjct: 198 REMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKC 257
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ AR +F ++ D++++++MI G+ +NG + ++ +F + + T+VG++
Sbjct: 258 GDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLI 317
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+ G L L F ++ + NP + T +Y K + A +F E +K V
Sbjct: 318 PLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVV 377
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG + NG + A +F ++ K PN T +L C G + G+ + + +
Sbjct: 378 AWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGK-WVHHL 436
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ +L P I +VD+ + G + EA +L SM E N + W ++ G LH
Sbjct: 437 IKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTWNTMIFGYGLHGYGHE 495
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
A + N+++ L +N LS +Y+ SH
Sbjct: 496 ALKLYNEMLHLG-YNPSAVTFLSVLYACSH 524
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/571 (41%), Positives = 364/571 (63%), Gaps = 2/571 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
VL C + + G R H+ ++K + +++T L+ LY C L DA +V D++P++N
Sbjct: 16 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
VVSWTA+ISGY G EA+++F +L G P+ F+ VLT+CT + IH
Sbjct: 76 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
V + ++FV +SL+D+YAK G + +ARRVFD +PE+D+VS +++I GYA G +E
Sbjct: 136 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 195
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
ALD+F +QRE ++ Y T VL+A + L AL+ G S + R + VL +LID
Sbjct: 196 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 255
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQPNGN 334
MY+KCG + + ++F M ++ + WNA++ G S +G + A +F + E+ ++P+
Sbjct: 256 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSV 315
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
TF+ +L GC+H G+ D G + F M ++ P IEHYGC+VDL GR+G+++EA E IK
Sbjct: 316 TFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIK 375
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWND 453
MP EP A +WG+LL CR+H+ + E V +L+ +E N+GNYV+LSN+Y+++ +W+D
Sbjct: 376 KMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDD 435
Query: 454 AAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF 513
+R +M +K + K G SW+E+D +H F D SHP E++++K+ EL+ K+K AG+
Sbjct: 436 VRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGY 495
Query: 514 VPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKL 573
VP VL+D+++E+K+ L HSEKLALAFGLI T +RI KNLR+C DCH K
Sbjct: 496 VPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKF 555
Query: 574 ISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+S++ GRE+ +RD NRFH + G+CSC D+W
Sbjct: 556 LSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 191/341 (56%), Gaps = 4/341 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ A+ + M G P FTF VL +C FQLG + HSL++K
Sbjct: 82 MISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTS 141
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +SLL++Y G + +A +VFD +P+++VVS TAIISGY G EEA+++FR
Sbjct: 142 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFR 201
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RL G++ + + VLTA + L L + +H +V A V + SL+D+Y+KCG
Sbjct: 202 RLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCG 261
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVL 239
++ +RR+FD MPE+ ++SW++M+ GY+ +G +EA+++F M+ EN +KP+ T + VL
Sbjct: 262 SLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 321
Query: 240 SACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DK 296
S C+ G + G ++ +++ F ++D++ + GR+ +A + ++M +
Sbjct: 322 SGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEP 381
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
+W +++ ++ V + V +L + + GN +
Sbjct: 382 TAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVI 422
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/604 (39%), Positives = 368/604 (60%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF N + A+E M++EG P + T VL A A +G H ++AG
Sbjct: 219 IIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAG 278
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ T+L ++Y CG + A +FD + K VVSW +++ GY+ G E+AI +F
Sbjct: 279 FAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFE 338
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L G+ P +I+ L AC LGDL K++H +V++ G ++ V SL+ +Y+KC
Sbjct: 339 KMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCK 398
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +F+ + + VSW++MI GYA NG EAL+ F M+ +KP+ +TMV V+
Sbjct: 399 RVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIP 458
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A L W + R+ N + T L+DMY+KCG + A K+F + D+ +
Sbjct: 459 ALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVIT 518
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G +G + A +F +++K ++PN T++ ++ C+H+GLVDEG + F SM
Sbjct: 519 WNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMK 578
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + L P ++HYG MVDLLGR+G++ EA + I++MP+ P V+GA C++HK ++
Sbjct: 579 QDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVG 638
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L L P G +VLL+NIY+++ KW+ A++R M KG++K GCS VE+
Sbjct: 639 EKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNE 698
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F G +HP S++IY+ L+EL ++KAAG+VP T+ +L D+E++ ++ L HSEKL
Sbjct: 699 VHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKL 757
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL+ T+P I + KNLRVCGDCH A K IS +TGREIIVRD RFH F G CSC
Sbjct: 758 AIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSC 817
Query: 601 KDFW 604
D+W
Sbjct: 818 GDYW 821
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/451 (31%), Positives = 236/451 (52%), Gaps = 7/451 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++G+ N + A+ F MR + P + F ++LK C D + G H ++
Sbjct: 118 MLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNS 177
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ F T ++N+Y C + DA K+FD +P++++VSW II+G+ G ++A+ +
Sbjct: 178 FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVL 237
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G +PDS ++V VL A +G L K IHGY AG + V ++T+L D+Y+KCG
Sbjct: 238 RMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCG 297
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E AR +FD M +K +VSW+SM+ GY NG P++A+ +F M E + P T++ L
Sbjct: 298 SVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 357
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LG LE G + F+++ S+ + +LI MY+KC R+ A +F + + V
Sbjct: 358 ACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVS 417
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G + NG V A F +++ G++P+ T V ++ + + +
Sbjct: 418 WNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLII 477
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R L I +VD+ + G + A +L M + + I W A++ G H A
Sbjct: 478 RS-CLDKNIFVTTALVDMYSKCGAIHMARKLF-DMISDRHVITWNAMIDGYGTHGLGRAA 535
Query: 421 EHVLNQLI--ALEPWNSGNYVLLSNIYSASH 449
+ +++ A+EP + LS I + SH
Sbjct: 536 LDLFDKMKKGAVEP---NDITYLSVISACSH 563
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 55 LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEE 114
L++K GL + +T L++L+ G + +A +VF+ I DK + ++ GY +LE
Sbjct: 71 LVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLET 130
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A+ R+ + +KP ++ +L C DL K IHG + NVF T +V+
Sbjct: 131 ALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVN 190
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+YAKC ++ A ++FD+MPE+D+VSW+++I G++ NGF K+AL++ MQ E +P+ T
Sbjct: 191 MYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSIT 250
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+V VL A A +G L +G + R F + T L DMY+KCG + A +F M
Sbjct: 251 LVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMD 310
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
K V WN+++ G NG + A VF ++ + GI P G T + L C G ++ G+
Sbjct: 311 QKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK- 369
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F + +L I ++ + + ++D A ++ ++ + + W A++ G
Sbjct: 370 FVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH-VSWNAMILG 424
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/571 (41%), Positives = 364/571 (63%), Gaps = 2/571 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
VL C + + G R H+ ++K + +++T L+ LY C L DA +V D++P++N
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 542
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
VVSWTA+ISGY G EA+++F +L G P+ F+ VLT+CT + IH
Sbjct: 543 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 602
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
V + ++FV +SL+D+YAK G + +ARRVFD +PE+D+VS +++I GYA G +E
Sbjct: 603 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 662
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
ALD+F +QRE ++ Y T VL+A + L AL+ G S + R + VL +LID
Sbjct: 663 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 722
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQPNGN 334
MY+KCG + + ++F M ++ + WNA++ G S +G + A +F + E+ ++P+
Sbjct: 723 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSV 782
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
TF+ +L GC+H G+ D G + F M ++ P IEHYGC+VDL GR+G+++EA E IK
Sbjct: 783 TFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIK 842
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWND 453
MP EP A +WG+LL CR+H+ + E V +L+ +E N+GNYV+LSN+Y+++ +W+D
Sbjct: 843 KMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDD 902
Query: 454 AAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF 513
+R +M +K + K G SW+E+D +H F D SHP E++++K+ EL+ K+K AG+
Sbjct: 903 VRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGY 962
Query: 514 VPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKL 573
VP VL+D+++E+K+ L HSEKLALAFGLI T +RI KNLR+C DCH K
Sbjct: 963 VPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKF 1022
Query: 574 ISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+S++ GRE+ +RD NRFH + G+CSC D+W
Sbjct: 1023 LSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 191/341 (56%), Gaps = 4/341 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ A+ + M G P FTF VL +C FQLG + HSL++K
Sbjct: 549 MISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTS 608
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +SLL++Y G + +A +VFD +P+++VVS TAIISGY G EEA+++FR
Sbjct: 609 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFR 668
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RL G++ + + VLTA + L L + +H +V A V + SL+D+Y+KCG
Sbjct: 669 RLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCG 728
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVL 239
++ +RR+FD MPE+ ++SW++M+ GY+ +G +EA+++F M+ EN +KP+ T + VL
Sbjct: 729 SLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 788
Query: 240 SACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DK 296
S C+ G + G ++ +++ F ++D++ + GR+ +A + ++M +
Sbjct: 789 SGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEP 848
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
+W +++ ++ V + V +L + + GN +
Sbjct: 849 TAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVI 889
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 9/248 (3%)
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
S ++ SN KEAL M + L+ E+ VL+ C S A+ G + M +
Sbjct: 449 SPDLKTLCSNRQLKEAL---LEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIK 505
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ L T LI +Y KC + A +V EM +++ V W A++SG S GY A +
Sbjct: 506 TCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHL 565
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F ++ G PN TF +L CT + GRQ +S+ S I ++D+
Sbjct: 566 FVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ-IHSLVIKTSFESHIFVGSSLLDMYA 624
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWN-SGNYV 439
++G++ EA + +P E + + A+++G + + L E L+ L+ NYV
Sbjct: 625 KAGKICEARRVFDGLP-ERDVVSCTAIISG---YAQLGLDEEALDLFRRLQREGMRSNYV 680
Query: 440 LLSNIYSA 447
+++ +A
Sbjct: 681 TYASVLTA 688
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/604 (40%), Positives = 365/604 (60%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V N AIE M++ G +P F +LKACA F LG + H ++KA
Sbjct: 274 LISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKAN 333
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D+++ L+++Y +L DA+KVFD + ++++ W A+ISG + G +EA ++F
Sbjct: 334 ADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFY 393
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L GL + ++ VL + L S + +H + G + V L+D Y KC
Sbjct: 394 GLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCS 453
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A RVF++ DI++ +SMI + + A+ +F M R+ L+P+ + + +L+
Sbjct: 454 CLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLN 513
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL A E G + + + +F+S+ G L+ YAKCG + A F + ++ V
Sbjct: 514 ACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS 573
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ GL+ +G+ K A +FG++ GI PN T +LC C HAGLVDE +++FNSM
Sbjct: 574 WSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMK 633
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+F + EHY CM+DLLGR+G+LD+A EL+ SMP + NA VWGALL R+HK +L
Sbjct: 634 EMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELG 693
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ +L LEP SG +VLL+N Y++S WN+ AK+R +M D I+K SWVEV
Sbjct: 694 KLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDK 753
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F+VGD SHP++++IYSKLDEL + AG++P D L D++ EK+ L+ HSE+L
Sbjct: 754 VHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERL 813
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF L++T P IR+ KNLR+C DCH A K IS I REII+RD NRFH F +G+CSC
Sbjct: 814 AVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSC 873
Query: 601 KDFW 604
D+W
Sbjct: 874 GDYW 877
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 183/341 (53%), Gaps = 4/341 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ + +N + AI+ ++ MR EG F P VLK D QLG + H++ + G
Sbjct: 74 LVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DAQLGAQVHAMAMATG 130
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDI-PDKNVVSWTAIISGYINEGNLEEAINMF 119
D FV +L+ +Y G++ DA +VFD+ ++N VSW ++S Y+ +AI +F
Sbjct: 131 FGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVF 190
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G++P F V+ ACT ++ + +H V G ++VF A +LVD+Y K
Sbjct: 191 GEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKM 250
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ A +F++MP+ D+VSW+++I G NG A+++ M+ L P + + +L
Sbjct: 251 GRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSIL 310
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACA GA +LG FM + S+ +G L+DMYAK + A KVF M +D +
Sbjct: 311 KACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLI 370
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
+WNA++SG S G AF +F L K G+ N T +L
Sbjct: 371 LWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVL 411
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 223/455 (49%), Gaps = 20/455 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ +V ND AI+ + M G PT F F V+ AC + G + H+++V+ G
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG 232
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D F +L+++YV G + A +F+ +PD +VVSW A+ISG + G+ AI +
Sbjct: 233 YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ GL P+ F + +L AC G + IHG++ +A + ++ LVD+YAK
Sbjct: 293 QMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNH 352
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +VFD M +D++ W+++I G + G EA +FY +++E L T+ VL
Sbjct: 353 FLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLK 412
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+ ASL A + E+ F+ + + LID Y KC ++ A +VF E D +
Sbjct: 413 STASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIA 472
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS-- 358
++++ LS + + A +F ++ + G++P+ LL C ++G+Q
Sbjct: 473 VTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532
Query: 359 ----MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
MS F+ ++ Y + G +++A S+P E + W A++ G H
Sbjct: 533 KRQFMSDAFAGNALVYTY-------AKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQH 584
Query: 415 KKTDLAEHVLNQLI--ALEPWNSGNYVLLSNIYSA 447
A + +++ + P N++ ++++ A
Sbjct: 585 GHGKRALELFGRMVDEGINP----NHITMTSVLCA 615
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 184/373 (49%), Gaps = 8/373 (2%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G H+ ++K+G ++ L++ Y C A +VFD+IPD VSW+++++ Y N
Sbjct: 23 GAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
G AI F + G+ + F++ VL + D +H G G +VFV
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFV 137
Query: 169 ATSLVDLYAKCGNMEKARRVFDQM-PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
A +LV +Y G M+ ARRVFD+ E++ VSW+ ++ Y N +A+ +F M
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
++P + V++AC ++ G + + R + + L+DMY K GR+ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+F +M D D V WNA++SG +NG+ A + Q++ G+ PN +L C AG
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 317
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
D GRQ M + + + G +VD+ ++ LD+A ++ M + I+W AL
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDAMKVFDWMSHR-DLILWNAL 375
Query: 408 LAGCRLHKKTDLA 420
++GC + D A
Sbjct: 376 ISGCSHGGRHDEA 388
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/604 (40%), Positives = 365/604 (60%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V N AIE M++ G +P F +LKACA F LG + H ++KA
Sbjct: 181 LISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKAN 240
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D+++ L+++Y +L DA+KVFD + ++++ W A+ISG + G +EA ++F
Sbjct: 241 ADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFY 300
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L GL + ++ VL + L S + +H + G + V L+D Y KC
Sbjct: 301 GLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCS 360
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A RVF++ DI++ +SMI + + A+ +F M R+ L+P+ + + +L+
Sbjct: 361 CLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLN 420
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL A E G + + + +F+S+ G L+ YAKCG + A F + ++ V
Sbjct: 421 ACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS 480
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ GL+ +G+ K A +FG++ GI PN T +LC C HAGLVDE +++FNSM
Sbjct: 481 WSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMK 540
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+F + EHY CM+DLLGR+G+LD+A EL+ SMP + NA VWGALL R+HK +L
Sbjct: 541 EMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELG 600
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ +L LEP SG +VLL+N Y++S WN+ AK+R +M D I+K SWVEV
Sbjct: 601 KLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDK 660
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F+VGD SHP++++IYSKLDEL + AG++P D L D++ EK+ L+ HSE+L
Sbjct: 661 VHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERL 720
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF L++T P IR+ KNLR+C DCH A K IS I REII+RD NRFH F +G+CSC
Sbjct: 721 AVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSC 780
Query: 601 KDFW 604
D+W
Sbjct: 781 GDYW 784
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 172/321 (53%), Gaps = 4/321 (1%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
MR EG F P VLK D QLG + H++ + G D FV +L+ +Y G+
Sbjct: 1 MRAEGVCCNEFALPVVLKCVP---DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 81 LADALKVFDDI-PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
+ DA +VFD+ ++N VSW ++S Y+ +AI +F ++ G++P F V+
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
ACT ++ + +H V G ++VF A +LVD+Y K G ++ A +F++MP+ D+VS
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W+++I G NG A+++ M+ L P + + +L ACA GA +LG FM
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 237
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
+ S+ +G L+DMYAK + A KVF M +D ++WNA++SG S G AF
Sbjct: 238 KANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFS 297
Query: 320 VFGQLEKCGIQPNGNTFVGLL 340
+F L K G+ N T +L
Sbjct: 298 IFYGLRKEGLGVNRTTLAAVL 318
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 222/455 (48%), Gaps = 15/455 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ +V ND AI+ + M G PT F F V+ AC + G + H+++V+ G
Sbjct: 80 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG 139
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D F +L+++YV G + A +F+ +PD +VVSW A+ISG + G+ AI +
Sbjct: 140 YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 199
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ GL P+ F + +L AC G + IHG++ +A + ++ LVD+YAK
Sbjct: 200 QMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNH 259
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +VFD M +D++ W+++I G + G EA +FY +++E L T+ VL
Sbjct: 260 FLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLK 319
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+ ASL A + E+ F+ + + LID Y KC ++ A +VF E D +
Sbjct: 320 STASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIA 379
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS-- 358
++++ LS + + A +F ++ + G++P+ LL C ++G+Q
Sbjct: 380 VTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 439
Query: 359 ----MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
MS F+ ++ Y + G +++A S+P E + W A++ G H
Sbjct: 440 KRQFMSDAFAGNALVYTY-------AKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQH 491
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
A + +++ E N + + S + + +H
Sbjct: 492 GHGKRALELFGRMVD-EGINPNHITMTSVLCACNH 525
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 136/276 (49%), Gaps = 3/276 (1%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM-PEKDIVSWSSMI 204
D +H G G +VFVA +LV +Y G M+ ARRVFD+ E++ VSW+ ++
Sbjct: 22 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 81
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
Y N +A+ +F M ++P + V++AC ++ G + + R +
Sbjct: 82 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 141
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ L+DMY K GR+ A +F +M D D V WNA++SG +NG+ A + Q+
Sbjct: 142 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 201
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ G+ PN +L C AG D GRQ M + + + G +VD+ ++
Sbjct: 202 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHF 260
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
LD+A ++ M + I+W AL++GC + D A
Sbjct: 261 LDDAMKVFDWMS-HRDLILWNALISGCSHGGRHDEA 295
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/577 (42%), Positives = 368/577 (63%), Gaps = 1/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + TF L ACAR D + G AG D FV +SLL+LY G + DA+KV
Sbjct: 106 PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD +P ++ V+W+ +++G+++ G +AI M+RR+ G+K D ++ V+ ACT ++
Sbjct: 166 FDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNV 225
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+HG++ G +V ATSLVD+YAK G ++ A RVF M ++ VSWS+MI G+
Sbjct: 226 RMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A NG EAL +F NMQ ++P+ +V L AC+++G L+LG F+ R F N
Sbjct: 286 AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNC 344
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+LGT IDMY+KCG +A A +F + D+D ++WNA+++ +G + A +F ++ +
Sbjct: 345 ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNET 404
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++P+ TF LL +H+GLV+EG+ +F M F +TP +HY C+VDLL RSG ++E
Sbjct: 405 GMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEE 464
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A +L+ SM EP +W ALL+GC +KK +L E + + ++ L+P + G L+SN+Y+A
Sbjct: 465 ASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAA 524
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ KW+ ++R +M D G +K+ GCS +E+ G H FL+ D SHP E+I SK+ +L +
Sbjct: 525 TKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLE 584
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
++ G++P T+ V D+EEE K+ L+ HSEKLA+AFGL+ T P + I KNLRVCGDC
Sbjct: 585 MRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDC 644
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H+AIK ISKI REI+VRD RFH F +G CSC+D+W
Sbjct: 645 HDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 168/309 (54%), Gaps = 4/309 (1%)
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
G+ A+ +FR L +PDS + L+AC +LGDL + + +AG +VF
Sbjct: 86 RRGSPASALRVFR-ALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVF 144
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
V +SL+ LYA+ G M A +VFD+MP +D V+WS+M+ G+ S G P +A+ M+ M+ +
Sbjct: 145 VCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG 204
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+K + M+GV+ AC + + +G + R+ + V T+L+DMYAK G + AC
Sbjct: 205 VKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVAC 264
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+VF M ++ V W+A++SG + NG A +F ++ GIQP+ V L C++ G
Sbjct: 265 RVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIG 324
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+ GR + R F ++ +D+ + G L A +++ +M + + I+W A+
Sbjct: 325 FLKLGRSVHGFIVRRFDFNCILGTAA--IDMYSKCGSLASA-QMLFNMISDRDLILWNAM 381
Query: 408 LAGCRLHKK 416
+A C H +
Sbjct: 382 IACCGAHGR 390
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 170/311 (54%), Gaps = 7/311 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GFVS AI+ Y MR +G V++AC + ++G H +++ G
Sbjct: 180 MVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHG 239
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D TSL+++Y G L A +VF + +N VSW+A+ISG+ G +EA+ +FR
Sbjct: 240 MRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFR 299
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++PDS ++V L AC+ +G L + +HG++ N + T+ +D+Y+KCG
Sbjct: 300 NMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDF-NCILGTAAIDMYSKCG 358
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+ +F+ + ++D++ W++MI ++G ++AL +F M ++P++ T +LS
Sbjct: 359 SLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLS 418
Query: 241 ACASLGALELG-VWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDKD 297
A + G +E G +W + N F P L+D+ A+ G + +A + MK +
Sbjct: 419 ALSHSGLVEEGKLWFGCMV--NHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEP 476
Query: 298 QV-VWNAVVSG 307
V +W A++SG
Sbjct: 477 TVAIWVALLSG 487
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/640 (39%), Positives = 369/640 (57%), Gaps = 36/640 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR F F A+ + MR G P + FP VLK+C D + G H IV+ G
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 61 LDCDEFVKTSLLNLY---------VHCGYLADAL-------------------------- 85
+DCD + +L+N+Y + G + D +
Sbjct: 136 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV 195
Query: 86 -KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+VF+ +P K+VVS+ II+GY G E+A+ M R + LKPDSF++ VL ++
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
D+ K IHGYV G +V++ +SLVD+YAK +E + RVF ++ +D +SW+S++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GY NG EAL +F M +KP V+ ACA L L LG ++ R F
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
SN + + L+DMY+KCG + A K+F M D+V W A++ G +++G+ A +F ++
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
++ G++PN FV +L C+H GLVDE +FNSM++V+ L +EHY + DLLGR+G+
Sbjct: 436 KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 495
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
L+EA+ I M +EP VW LL+ C +HK +LAE V ++ ++ N G YVL+ N+
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+++ +W + AK+R M KG++K CSW+E+ H F+ GD SHP +KI L +
Sbjct: 556 YASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAV 615
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
+++ G+V T VL D++EE K+ L HSE+LA+AFG+I T P IR+ KN+R+C
Sbjct: 616 MEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRIC 675
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH AIK ISKIT REIIVRDN+RFH F G+CSC D+W
Sbjct: 676 TDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 179/381 (46%), Gaps = 40/381 (10%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
++++Y + L +AL +F + V++W ++I + ++ +A+ F + G PD
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK---------CGN 181
VL +CT + DL + +HG++ G +++ +L+++YAK GN
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 182 ---------------------------MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
++ RRVF+ MP KD+VS++++I GYA +G +
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
+AL M M +LKP+ +T+ VL + + G ++ R S+ +G++L+
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
DMYAK R+ + +VF + +D + WN++V+G NG A +F Q+ ++P
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSR-VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
F ++ C H + G+Q + R F I +VD+ + G + A ++
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA--SALVDMYSKCGNIKAARKIFD 402
Query: 394 SMPMEPNAIVWGALLAGCRLH 414
M + + + W A++ G LH
Sbjct: 403 RMNV-LDEVSWTAIIMGHALH 422
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/297 (18%), Positives = 120/297 (40%), Gaps = 38/297 (12%)
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
A+ ++ +Y + +A +F + +++W S+I+ + +AL F M+
Sbjct: 42 ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM----- 283
P++ VL +C + L G F+ R + G L++MYAK M
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161
Query: 284 ---------------------AQAC----------KVFREMKDKDQVVWNAVVSGLSMNG 312
A+ C +VF M KD V +N +++G + +G
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ A + ++ ++P+ T +L + V +G++ + R + +
Sbjct: 222 MYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK-GIDSDVYIG 280
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+VD+ +S +++++ + + + I W +L+AG + + + A + Q++
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCR-DGISWNSLVAGYVQNGRYNEALRLFRQMVT 336
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/605 (40%), Positives = 368/605 (60%), Gaps = 22/605 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+VSN + + Y M G T VL CA+ LG HSL +K+
Sbjct: 84 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSS 143
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +LL++Y CG L AL+VF+ + ++NVVSWT++I+GY +G + AI + +
Sbjct: 144 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQ 203
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+K D +I +L AC + G L K +H Y+ N+FV +L+D+YAKCG
Sbjct: 204 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCG 263
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ME A VF M KDI+SW++M+ LKP+ TM +L
Sbjct: 264 SMEGANSVFSTMVVKDIISWNTMVG---------------------ELKPDSRTMACILP 302
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL ALE G ++ RN + S+ + L+D+Y KCG + A +F + KD V
Sbjct: 303 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 362
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G M+GY A F ++ GI+P+ +F+ +L C+H+GL+++G +FF M
Sbjct: 363 WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 422
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
F++ P +EHY CMVDLL R+G L +A++ I+++P+ P+A +WGALL GCR++ +LA
Sbjct: 423 NDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELA 482
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V ++ LEP N+G YVLL+NIY+ + KW + ++R +G KG++K GCSW+E+ G
Sbjct: 483 EKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGR 542
Query: 481 VHEFLVGDN-SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V+ F+ G+N SHP S+KI S L ++ K+K G+ P T + L + +E +K+ L HSEK
Sbjct: 543 VNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEK 602
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL+T P+ IR+ KNLRVCGDCHE K +SK T REI++RD+NRFH F +G CS
Sbjct: 603 LAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCS 662
Query: 600 CKDFW 604
C+ FW
Sbjct: 663 CRGFW 667
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 191/369 (51%), Gaps = 30/369 (8%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A ++FD + D++V+SW ++ISGY++ G E + +++++++ G+ D +I+ VL C +
Sbjct: 66 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAK 125
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
G LS K +H ++ R + + +L+D+Y+KCG+++ A RVF++M E+++VSW+SM
Sbjct: 126 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 185
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I GY +G+ A+ + M++E +K + + +L ACA G+L+ G +++ N
Sbjct: 186 IAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 245
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
SN + L+DMYAKCG M A VF M KD + WN +V L
Sbjct: 246 ASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL--------------- 290
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRS 382
+P+ T +L C ++ G++ + R +S + + +VDL +
Sbjct: 291 ------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVAN--ALVDLYVKC 342
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL--IALEPWNSGNYVL 440
G L A L +P + + W ++AG +H + A N++ +EP
Sbjct: 343 GVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP---DEVSF 398
Query: 441 LSNIYSASH 449
+S +Y+ SH
Sbjct: 399 ISILYACSH 407
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 136/274 (49%), Gaps = 22/274 (8%)
Query: 164 RNVFVATSLVDLYAKCGNM--------------------EKARRVFDQMPEKDIVSWSSM 203
+NV++ +V YAK G+ E A +FD++ ++D++SW+SM
Sbjct: 25 KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSM 84
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I GY SNG + L ++ M + + T++ VL CA G L LG S ++ F
Sbjct: 85 ISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSF 144
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
TL+DMY+KCG + A +VF +M +++ V W ++++G + +G+ A + Q
Sbjct: 145 ERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQ 204
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
+EK G++ + +L C +G +D G+ + + + ++ + ++D+ + G
Sbjct: 205 MEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI-KANNMASNLFVCNALMDMYAKCG 263
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
++ A+ + +M ++ + I W ++ + +T
Sbjct: 264 SMEGANSVFSTMVVK-DIISWNTMVGELKPDSRT 296
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/670 (38%), Positives = 382/670 (57%), Gaps = 66/670 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ F +AI + M +E P+ FT VL +CA +G + HS +VK G
Sbjct: 113 IIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLG 172
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
L V TSLLN+Y CG A VFD
Sbjct: 173 LGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFE 232
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLKPDSFSIVRVLTACTQLGDLS 148
+PD+++VSW ++ISGY +G EA+ +F ++L+ LKPD+F++ +L+AC L L+
Sbjct: 233 KMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLN 292
Query: 149 TAKWIHGYVNEA---------------------------------GKGRNVFVATSLVDL 175
K IH Y+ A N+ TSL+D
Sbjct: 293 IGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDG 352
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y K GN++ AR +F+++ ++D+V+W++MI GY NG +AL++F M E +P YT+
Sbjct: 353 YTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTL 412
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+LS +SL LE G + + S P + LI MYAK G + A +VF
Sbjct: 413 AAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNG 472
Query: 296 KDQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
K ++V W +++ L+ +G K A +F ++ G++P+ T+VG+L CTH GLV++GR+
Sbjct: 473 KKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRK 532
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++N M+ V + P + HY CM+DL GR+G L EA+ I+SMP+EP+ I WG+LLA C++H
Sbjct: 533 YYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K DLA+ +L+ ++P NSG Y+ L+N+YSA KW +AA+ R +M D+G++K +G SW
Sbjct: 593 KNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISW 652
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+ + VH F V D HP ++IY + E+ ++K GF+P T+ VL D+EEE K+ L
Sbjct: 653 IHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILK 712
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFGL+ T +RI KNLRVC DCH AIK ISK+ GREIIVRD RFH F
Sbjct: 713 YHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFK 772
Query: 595 EGSCSCKDFW 604
+GSCSC+D+W
Sbjct: 773 DGSCSCRDYW 782
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 209/479 (43%), Gaps = 99/479 (20%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
F +L+ R D G H I+K GL ++ +L+ Y G L A VFD++P
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 93 DKNVVSWTAIISGYINEGNLE-------------------------------EAINMFRR 121
K+ SW +ISGY +GN E AI MF +
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
++ + P F++ VL++C L + IH +V + G G V VATSL+++YAKCG+
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 182 MEKARRVFD-------------------------------QMPEKDIVSWSSMIQGYASN 210
A+ VFD +MP++DIVSW+SMI GY+
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 211 GFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
G+ EAL +F M E +LKP+ +T+ +LSACA+L L +G +++ R E ++ +
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 270 GTTLIDMYAKC---------------------------------GRMAQACKVFREMKDK 296
G LI MYAK G + A ++F +++D+
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
D V W A++ G NG A +F + G +PN T +L + +++ G+Q
Sbjct: 373 DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIH 432
Query: 357 NSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
S + S TP + + ++ + ++G ++ A + + + W +++ H
Sbjct: 433 ASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQH 489
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/605 (40%), Positives = 363/605 (60%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N F AI + MR G +PT F F ++ACA ++G + H L +K G
Sbjct: 77 MISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFG 136
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV ++L ++Y CG + DA KVF+++P K+ VSWTA+I GY G EEA+ F+
Sbjct: 137 IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFK 196
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ + D + L AC L + +H V + G ++FV +L D+Y+K G
Sbjct: 197 KMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAG 256
Query: 181 NMEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ME A VF E +++VS++ +I GY ++ L +F ++R+ ++P +T ++
Sbjct: 257 DMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLI 316
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACA+ ALE G + + + F +P + + L+DMY KCG + QA + F E+ D ++
Sbjct: 317 KACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEI 376
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN++VS +G K A +F ++ G++PN TF+ LL GC+HAGLV+EG +F SM
Sbjct: 377 AWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSM 436
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + + P EHY C++DLLGR+G+L EA E I MP EPNA W + L CR+H ++
Sbjct: 437 DKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEM 496
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ +L+ LEP NSG VLLSNIY+ +W D +R M D ++K+ G SWV+V
Sbjct: 497 GKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGY 556
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
H F D SHP IY KLD L ++KAAG+VP TD V D+++ K+ L HSE+
Sbjct: 557 KTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSER 616
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
+A+AF LI+ I + KNLRVC DCH AIK ISK+TGR+IIVRDN+RFH F +GSCS
Sbjct: 617 IAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCS 676
Query: 600 CKDFW 604
C D+W
Sbjct: 677 CGDYW 681
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 198/376 (52%), Gaps = 5/376 (1%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
V++ A+ + G + H+L++ AG F+ L+N+Y CG L ALK+FD +P +N
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+VSWTA+ISG EAI F + G P F+ + AC LG + K +H
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ G G +FV ++L D+Y+KCG M A +VF++MP KD VSW++MI GY+ G +E
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL F M E + + + + L AC +L A + G S + + F S+ +G L D
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250
Query: 276 MYAKCGRMAQACKVFR-EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
MY+K G M A VF + + ++ V + ++ G ++ VF +L + GI+PN
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
TF L+ C + +++G Q + ++ F P + +VD+ G+ G L++A +
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQAIQAFD 368
Query: 394 SMPMEPNAIVWGALLA 409
+ +P I W +L++
Sbjct: 369 EIG-DPTEIAWNSLVS 383
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 165/372 (44%), Gaps = 41/372 (11%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
D+ ++ V+ + L K +H + AG F+ LV++Y+KCG ++ A ++F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D MP++++VSW++MI G + N EA+ F M+ P + + ACASLG++E
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
+G + S +G+ L DMY+KCG M ACKVF EM KD+V W A++ G S
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM------SRVF 363
G + A F ++ + + + L C GR +S+ S +F
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243
Query: 364 ---SLTPM----------------------IEHYGCMVDLLGRSGQLDEAHEL---IKSM 395
+LT M + Y C++D + Q+++ + ++
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303
Query: 396 PMEPNAIVWGALLAGC----RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKW 451
+EPN + +L+ C L + T L V+ +P+ S +L ++Y
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSS---ILVDMYGKCGLL 360
Query: 452 NDAAKIRSMMGD 463
A + +GD
Sbjct: 361 EQAIQAFDEIGD 372
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/605 (40%), Positives = 363/605 (60%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N F AI + MR G +PT F F ++ACA ++G + H L +K G
Sbjct: 12 MISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFG 71
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV ++L ++Y CG + DA KVF+++P K+ VSWTA+I GY G EEA+ F+
Sbjct: 72 IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFK 131
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ + D + L AC L + +H V + G ++FV +L D+Y+K G
Sbjct: 132 KMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAG 191
Query: 181 NMEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ME A VF E +++VS++ +I GY ++ L +F ++R+ ++P +T ++
Sbjct: 192 DMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLI 251
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACA+ ALE G + + + F +P + + L+DMY KCG + QA + F E+ D ++
Sbjct: 252 KACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEI 311
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN++VS +G K A +F ++ G++PN TF+ LL GC+HAGLV+EG +F SM
Sbjct: 312 AWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSM 371
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + + P EHY C++DLLGR+G+L EA E I MP EPNA W + L CR+H ++
Sbjct: 372 DKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEM 431
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ +L+ LEP NSG VLLSNIY+ +W D +R M D ++K+ G SWV+V
Sbjct: 432 GKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGY 491
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
H F D SHP IY KLD L ++KAAG+VP TD V D+++ K+ L HSE+
Sbjct: 492 KTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSER 551
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
+A+AF LI+ I + KNLRVC DCH AIK ISK+TGR+IIVRDN+RFH F +GSCS
Sbjct: 552 IAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCS 611
Query: 600 CKDFW 604
C D+W
Sbjct: 612 CGDYW 616
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 167/321 (52%), Gaps = 5/321 (1%)
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+P +N+VSWTA+ISG EAI F + G P F+ + AC LG +
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
K +H + G G +FV ++L D+Y+KCG M A +VF++MP KD VSW++MI GY+
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G +EAL F M E + + + + L AC +L A + G S + + F S+ +G
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 271 TTLIDMYAKCGRMAQACKVFR-EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
L DMY+K G M A VF + + ++ V + ++ G ++ VF +L + GI
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEA 388
+PN TF L+ C + +++G Q + ++ F P + +VD+ G+ G L++A
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEQA 298
Query: 389 HELIKSMPMEPNAIVWGALLA 409
+ + +P I W +L++
Sbjct: 299 IQAFDEIG-DPTEIAWNSLVS 318
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/592 (42%), Positives = 366/592 (61%), Gaps = 1/592 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A++ M+ EG P + T VL G H V+ D V T LL+
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF-RRLLHRGLKPDSF 132
+Y C L A K+FD + +N VSW+A+I GY+ ++EA+ +F + +L + P
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPV 313
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++ VL AC +L DLS + +H Y+ + G ++ + +L+ +YAKCG ++ A R FD+M
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEM 373
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
KD VS+S+++ G NG AL +F MQ + P+ TM+GVL AC+ L AL+ G
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 433
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ ++ F ++ ++ LIDMY+KCG+++ A +VF M D V WNA++ G ++G
Sbjct: 434 CSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHG 493
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
A G+F L G++P+ TF+ LL C+H+GLV EGR +F++MSR FS+ P +EH
Sbjct: 494 LGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHC 553
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEP 432
CMVD+LGR+G +DEAH I++MP EP+ +W ALL+ CR+HK +L E V ++ +L P
Sbjct: 554 ICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGP 613
Query: 433 WNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHP 492
++GN+VLLSNIYSA+ +W+DAA IR D G++KI GCSW+E++G+VH F+ GD SH
Sbjct: 614 ESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHL 673
Query: 493 LSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPK 552
+I KL+EL ++K G+ V D+EEEEK+ L HSEKLA+AFG++
Sbjct: 674 QLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAG 733
Query: 553 DVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I + KNLRVCGDCH AIK ++ IT REI VRD NRFH F G+C+C DFW
Sbjct: 734 RPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 234/435 (53%), Gaps = 11/435 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + N F AI+ Y+SM + G P +T+PFVLKAC+ + GV HS G
Sbjct: 80 IIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFG 139
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV T+L++ Y CG L +A ++F + ++VV+W A+I+G G ++A+ +
Sbjct: 140 LESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIM 199
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ P+S +IV VL + L K +HGY V V T L+D+YAKC
Sbjct: 200 QMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQ 259
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLKPEYYTMVGVL 239
+ AR++FD M ++ VSWS+MI GY ++ KEAL++F M ++ + P T+ VL
Sbjct: 260 CLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVL 319
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACA L L G ++ + + + +LG TL+ MYAKCG + A + F EM KD V
Sbjct: 320 RACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSV 379
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS- 358
++A+VSG NG VA +F ++ GI P+ T +G+L C+H + G F S
Sbjct: 380 SFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG---FCSH 436
Query: 359 ---MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
+ R F+ +I ++D+ + G++ A E+ M + + W A++ G +H
Sbjct: 437 GYLIVRGFATDTLI--CNALIDMYSKCGKISFAREVFNRMDRH-DIVSWNAMIIGYGIHG 493
Query: 416 KTDLAEHVLNQLIAL 430
A + + L+AL
Sbjct: 494 LGMEALGLFHDLLAL 508
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 207/413 (50%), Gaps = 9/413 (2%)
Query: 27 LPTNF----TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLA 82
+P F + +L+AC + + H +K + D V L LY+ C +
Sbjct: 1 MPLRFEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVV 60
Query: 83 DALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT 142
A ++FD+IP+ +V+ W II Y G + AI+++ +LH G++P+ ++ VL AC+
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
L + IH + G +VFV T+LVD YAKCG + +A+R+F M +D+V+W++
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
MI G + G +A+ + MQ E + P T+VGVL AL G + R
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRS 240
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
F + V+GT L+DMYAKC + A K+F M +++V W+A++ G + +K A +F
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFD 300
Query: 323 QL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
Q+ K + P T +L C + GR+ + ++ S+ ++ ++ + +
Sbjct: 301 QMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLG-NTLLSMYAK 359
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN--QLIALEP 432
G +D+A M +++ + A+++GC + +A + QL ++P
Sbjct: 360 CGVIDDAIRFFDEMN-PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDP 411
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 162/329 (49%), Gaps = 9/329 (2%)
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
+ +L AC Q L+ AK IH + + + V L LY C + ARR+FD++P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
++ W+ +I+ YA NG A+D++++M ++P YT VL AC+ L A+E GV
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
S + S+ + T L+D YAKCG + +A ++F M +D V WNA+++G S+ G
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
A + Q+++ GI PN +T VG+L A + G+ R ++ G
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG- 250
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI---ALE 431
++D+ + L A ++ M + N + W A++ G A + +Q+I A++
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD 309
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSM 460
P V L ++ A K D ++ R +
Sbjct: 310 P----TPVTLGSVLRACAKLTDLSRGRKL 334
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 256/606 (42%), Positives = 365/606 (60%), Gaps = 43/606 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI+ + N+ AI Y M F P +T+P VLKAC+ GV+ H+ +VK G
Sbjct: 108 MIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHG 167
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMF 119
L D + +S + +Y G L +A ++ DD + + V W A+I GY+ G +E A +F
Sbjct: 168 LGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELF 227
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ PD I + W +++ +++C
Sbjct: 228 EGM------PDRSMI---------------STW-----------------NAMISGFSRC 249
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E AR FD+M E+D +SWS+MI GY G EAL++F+ MQ+E ++P + + VL
Sbjct: 250 GMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVL 309
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACA+LGAL+ G W ++ +RN + VLGT+L+DMYAKCGR+ A +VF +M +K+
Sbjct: 310 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 369
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ GL+M+G + A +F +++ I PN TFVG+L C H GLV +G FNSM
Sbjct: 370 SWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSM 426
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + + P IEHYGC+VDLLGR+G L EA +++ S+P EP VWGALL CR H +L
Sbjct: 427 RKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVEL 486
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD- 478
E V L+ LEP NSG Y LLSNIY+ + +W + ++R +M ++GI+ G S +++
Sbjct: 487 GERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGR 546
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
G VH+F++GD SHP + IY LD++ +L+ G+ P VLFDI+EEEK+ + HSE
Sbjct: 547 GEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSE 606
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA+ FGLI T+P IRI KNLRVC DCH A KLIS++ REIIVRD R+H F G+C
Sbjct: 607 KLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGAC 666
Query: 599 SCKDFW 604
SCKDFW
Sbjct: 667 SCKDFW 672
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/527 (45%), Positives = 348/527 (66%), Gaps = 3/527 (0%)
Query: 81 LADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGL-KPDSFSIVRVL 138
++ A KVF I NV W +I GY GN A +++R + GL +PD+ + ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
A T + D+ + IH V +G G ++V SL+ LYA CG++ A +VFD+MPEKD+V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+W+S+I G+A NG P+EAL ++ M + +KP+ +T+V +LSACA +GAL LG +M
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ N L+D+YA+CGR+ +A +F EM DK+ V W +++ GL++NG+ K A
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 319 GVFGQLEKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
+F +E G+ P TFVG+L C+H G+V EG ++F M + + P IEH+GCMVD
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGN 437
LL R+GQ+ +A+E IKSMPM+PN ++W LL C +H +DLAE Q++ LEP +SG+
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 428
Query: 438 YVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKI 497
YVLLSN+Y++ +W+D KIR M G++K+ G S VEV VHEFL+GD SHP S+ I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 498 YSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRI 557
Y+KL E+ +L++ G+VP +V D+EEEEK+ + HSEK+A+AF LI+T + I +
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 558 AKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLRVC DCH AIKL+SK+ REI+VRD +RFH F GSCSC+D+W
Sbjct: 549 VKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 203/337 (60%), Gaps = 8/337 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRG+ A Y MR G + P T+PF++KA D +LG HS+++++
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G +V+ SLL+LY +CG +A A KVFD +P+K++V+W ++I+G+ G EEA+ ++
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G+KPD F+IV +L+AC ++G L+ K +H Y+ + G RN+ + L+DLYA+C
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGV 238
G +E+A+ +FD+M +K+ VSW+S+I G A NGF KEA+++F M+ E L P T VG+
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-D 295
L AC+ G ++ G M R E+ P + ++D+ A+ G++ +A + + M
Sbjct: 331 LYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 389
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
+ V+W ++ +++G +A F +++ ++PN
Sbjct: 390 PNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPN 424
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/604 (40%), Positives = 372/604 (61%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N + A+E M+ EG P + T +L A A ++G H ++AG
Sbjct: 247 IISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAG 306
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V T+L+++Y CG + A +FD + K VVSW ++I GY+ G+ A+ +F+
Sbjct: 307 FESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQ 366
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ ++ + +++ L AC LGD+ +++H +++ G +V V SL+ +Y+KC
Sbjct: 367 KMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCK 426
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +F+ + K +VSW++MI GYA NG EA+D F MQ +N+KP+ +TMV V+
Sbjct: 427 RVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIP 486
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A L L W + R N + T L+DMYAKCG + A K+F M ++
Sbjct: 487 ALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTT 546
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G +G K A +F +++K I+PN TF+ +L C+H+GLV+EG Q+F SM
Sbjct: 547 WNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMK 606
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + L P ++HYG MVDLLGR+ +L+EA + I+ MP+EP V+GA+L CR+HK +L
Sbjct: 607 KDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELG 666
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E N++ L+P + G +VLL+NIY+ + W+ A++R+ M KGIQK G S VE+
Sbjct: 667 EKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNE 726
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F G SHP ++KIY+ L+ L ++KAAG++P T+ V D+E+ K+ L HSEKL
Sbjct: 727 VHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKL 785
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF L+ T+P I + KNLRVCGDCH A K IS +T REIIVRD RFH F +G+CSC
Sbjct: 786 AIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSC 845
Query: 601 KDFW 604
D+W
Sbjct: 846 GDYW 849
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 221/414 (53%), Gaps = 2/414 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++G+ N A+ F+ MR +G P + F ++LK C D + G H ++ G
Sbjct: 146 MLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNG 205
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ F T ++N+Y C + +A K+FD +P++++V W IISGY G + A+ +
Sbjct: 206 FASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVL 265
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G +PDS +IV +L A +G L + IHGY AG V V+T+LVD+Y+KCG
Sbjct: 266 RMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCG 325
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR +FD+M K +VSW+SMI GY NG P A+++F M E ++ T++G L
Sbjct: 326 SVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALH 385
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LG +E G + +++ E S+ + +LI MY+KC R+ A ++F ++ K V
Sbjct: 386 ACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVS 445
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G + NG + A F +++ I+P+ T V ++ ++ + + +
Sbjct: 446 WNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVI 505
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R L + +VD+ + G + A +L M E + W A++ G H
Sbjct: 506 RT-CLDKNVFVATALVDMYAKCGAVHTARKLFDMMD-ERHVTTWNAMIDGYGTH 557
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 191/356 (53%), Gaps = 2/356 (0%)
Query: 55 LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEE 114
LI+K GL + +T L++L+ G L +A +VF I DK + ++ GY +L++
Sbjct: 99 LIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDD 158
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A++ F R+ + G++P ++ +L C DL K IH + G NVF T +V+
Sbjct: 159 AVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVN 218
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+YAKC +E+A ++FD+MPE+D+V W+++I GYA NGF K AL++ MQ E +P+ T
Sbjct: 219 MYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSIT 278
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+V +L A A +G+L +G + R F S + T L+DMY+KCG + A +F M
Sbjct: 279 IVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMT 338
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
K V WN+++ G NG A +F ++ ++ T +G L C G V++GR
Sbjct: 339 GKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGR- 397
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F + + L + ++ + + ++D A E+ +++ + W A++ G
Sbjct: 398 FVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENL-QHKTLVSWNAMILG 452
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/606 (41%), Positives = 370/606 (61%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+R + + AI+ Y M+ G NFT+PFVLK CA E G H +V+ G
Sbjct: 103 MLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTG 162
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV+ +L+++Y CG + DA +VFD + ++VV WTA+I+ Y +A+ +FR
Sbjct: 163 FGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFR 222
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G D + + V +A QLGD A +HGY G +V V S+V +YAKCG
Sbjct: 223 KMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCG 282
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+E+AR VFD+M E++ +SW+SM+ GY NG P +AL +F MQ P T + ++S
Sbjct: 283 NVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVS 342
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR--EMKDKDQ 298
AC+ LG+ LG +F+ ++ + L ++DMY KCG + A ++F E+ ++D
Sbjct: 343 ACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDV 402
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WN ++SG ++G+ K A +F +++ G++PN TF +L C+HAGL+DEGR+ F
Sbjct: 403 SSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFAD 462
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M+++ S+ P ++HY CMVD+LGR+G L+EA LIK +P P+ VWGALL CR+H T+
Sbjct: 463 MTKL-SVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTE 521
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E N L LEP ++G YVL+SNIY+AS+KW + +R M +G++K S +E
Sbjct: 522 LGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFG 581
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F D S P ++Y K++ LA ++K G+VP VL D+E E+K++ L HSE
Sbjct: 582 TEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSE 641
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA+AFG++ I++ KNLRVC DCH A K IS I GR+IIVRD NRFH F G C
Sbjct: 642 KLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRC 701
Query: 599 SCKDFW 604
SC D+W
Sbjct: 702 SCGDYW 707
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 144/310 (46%), Gaps = 26/310 (8%)
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNV--FVATSLVDLYAKCGNMEKARRVFD---- 190
+L CT L +T K IH ++ G + F+A L+ LY+K G++ AR +FD
Sbjct: 31 LLQCCTSL---TTLKLIHSSLSTRGFLLHTPHFLA-RLIILYSKLGDLHSARTLFDHRHH 86
Query: 191 ------QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
Q P + + +M++ YA+ G EA+D++ MQR + +T VL CAS
Sbjct: 87 HHHGHTQAPNSFLCN--TMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS 144
Query: 245 -LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
LGA+ G + R F S+ + L+DMYAKCG + A +VF M +D V W A
Sbjct: 145 ELGAV-FGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTA 203
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF--NSMSR 361
+++ A +F ++++ G + T + + + G + +GR + +
Sbjct: 204 MITLYEQAERPLKALMLFRKMQEEGFLGDEITAISV---ASAVGQLGDGRMAISVHGYAV 260
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+ + +V + + G ++ A + M E N I W ++L+G + + A
Sbjct: 261 LNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRME-ERNGISWNSMLSGYTQNGRPTDAL 319
Query: 422 HVLNQLIALE 431
+ NQ+ A E
Sbjct: 320 SLFNQMQASE 329
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/600 (42%), Positives = 371/600 (61%), Gaps = 9/600 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ ++SMR PT +FP +KAC+ D G ++H G D FV ++L+
Sbjct: 60 ALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIV 119
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL------HRGL 127
+Y CG L DA KVFD+IP +N+VSWT++I GY GN +A+++F+ LL +
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATM 179
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN--MEKA 185
DS +V V++AC+++ + IH +V + G R V V +L+D YAK G + A
Sbjct: 180 FLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP-EYYTMVGVLSACAS 244
R++FDQ+ +KD VS++S++ YA +G EA D+F + +E + T+ VL A +
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSH 299
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
GAL +G + R + ++GT++IDMY KCGR+ A F MK+K+ W A+
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAM 359
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
++G M+G+ A +F + G++PN TFV +L C+HAGL D G +FN+M F
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFG 419
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ P +EHYGCMVDLLGR+G L +A++LI+ M MEP++I+W +LLA CR+HK +LAE +
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISV 479
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+L L+P N G Y+LLS+IY+ S +W D ++R M ++G+ K G S +E++G VH F
Sbjct: 480 ARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVF 539
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
L+GD HP EKIY L EL KL AG+V T V D++EEEK+ L HSEKLA+AF
Sbjct: 540 LIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAF 599
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
G++ T P + + KNLRVC DCH IKLISKI RE +VRD RFH F +G CSC D+W
Sbjct: 600 GIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 191/373 (51%), Gaps = 18/373 (4%)
Query: 87 VFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+F+ DK +V SW ++I+ G+ EA+ F + L P S + AC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D+ + K H G ++FV+++L+ +Y+ CG +E AR+VFD++P+++IVSW+SMI+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 206 GYASNGFPKEALDMFYNMQRE------NLKPEYYTMVGVLSACASLGALELGVWASSFME 259
GY NG +A+ +F ++ E + + MV V+SAC+ + A L SF+
Sbjct: 151 GYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVI 210
Query: 260 RNEFLSNPVLGTTLIDMYAKCGR--MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ F +G TL+D YAK G +A A K+F ++ DKD+V +N+++S + +G A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 318 FGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
F VF +L K + N T +L +H+G + G+ + + R+ L + ++
Sbjct: 271 FDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSII 329
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWN 434
D+ + G+++ A M N W A++AG +H A + +I + P
Sbjct: 330 DMYCKCGRVETARLAFDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP-- 386
Query: 435 SGNYVLLSNIYSA 447
NY+ ++ +A
Sbjct: 387 --NYITFVSVLAA 397
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/604 (43%), Positives = 367/604 (60%), Gaps = 39/604 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+G + N+ AI Y M P FT+P + KAC + GV+ H+ ++K G
Sbjct: 101 IIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQG 160
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D ++++ + +Y G + A ++ + + +V+ + A+I GY+ G +E A +F
Sbjct: 161 LSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELF- 219
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ D + W NV V+ AKCG
Sbjct: 220 ---------------------WSMEDKNVGSW------------NVMVSG-----MAKCG 241
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E+AR +F++M EK+ +SWS+MI GY G+ KEAL++F MQRE ++P + + VL+
Sbjct: 242 MIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLA 301
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+LGAL+ G W +++ N + VLGT L+DMYAKCGR+ A VF +M+ K+
Sbjct: 302 ACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFT 361
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ GL M+G + A +F +++K +PNG T +G+L C H+G+VDEG + FNSM
Sbjct: 362 WNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSME 421
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V+ + P +EHYGC+VDLLGR+G L EA E++ SMPMEP+A VWGALL CR H +L
Sbjct: 422 EVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELG 481
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V L+ LEP NSG Y LLSNIY+ + +W+D A +R +M ++G++ G S ++ DGV
Sbjct: 482 ERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGV 541
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEF +GD SHP + IY L + +LK GF P T VLFDIEEEEK+ L HSEKL
Sbjct: 542 VHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKL 601
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI T P I + KNLR+C DCH A KLIS++ REIIVRD R+H F G+CSC
Sbjct: 602 AIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSC 661
Query: 601 KDFW 604
KDFW
Sbjct: 662 KDFW 665
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 248/604 (41%), Positives = 365/604 (60%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + NDCF A+EF++ MR GF P NFTF VLKAC +F G H ++K
Sbjct: 118 MIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTN 177
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D +V LL LY CG DA + F D+P +V+ W+ +IS + G E+A+ +F
Sbjct: 178 YERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFC 237
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + P+ F+ VL A + L +K IHG+ +AG +VFV+ +L+ YAKCG
Sbjct: 238 QMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCG 297
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E++ +F+ + +++ VSW+++I Y G + AL +F NM R ++ T +L
Sbjct: 298 CIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILR 357
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+L ALELG+ + + + +G LIDMYAKCG + A +F + +D+V
Sbjct: 358 ACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVS 417
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G SM+G A +F +++ +P+ TFVG+L C++ G +DEG+Q+F SM
Sbjct: 418 WNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMK 477
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + P +EHY CMV L+GRSG LD+A + I+ +P EP+ ++W ALL C +H +L
Sbjct: 478 QDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELG 537
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+++ LEP + ++VLLSNIY+ + +W + A +R M KG++K G SW+E G
Sbjct: 538 RISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGN 597
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F V D SH + I L+ L K + AG+ P + VL D+E++EK+ L HSE+L
Sbjct: 598 VHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERL 657
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
ALAFGL+ IRI KNLR+C DCH IKLISKI GR+IIVRD NRFH F GSCSC
Sbjct: 658 ALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSC 717
Query: 601 KDFW 604
D+W
Sbjct: 718 ADYW 721
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 203/414 (49%), Gaps = 2/414 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ ++ F A E + + EG F F VLK +LG H ++K G
Sbjct: 17 LIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVG 76
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ F+ T+L++ Y G ++ A +VFD+I K++VSWT +I+ Y EA+ F
Sbjct: 77 YGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFS 136
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G KP++F+ VL AC L + K +H V + R+++V L++LY +CG
Sbjct: 137 QMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCG 196
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + A R F MP+ D++ WS MI +A +G ++AL++F M+R + P +T VL
Sbjct: 197 DNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQ 256
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A + +L+L + ++ + L+ YAKCG + Q+ ++F + D++ V
Sbjct: 257 ASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVS 316
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN ++ G + A +F + + +Q T+ +L C ++ G Q +
Sbjct: 317 WNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTA 376
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + ++D+ + G + +A + + + + + W A++ G +H
Sbjct: 377 KTI-YGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLR-DKVSWNAIICGYSMH 428
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 156/322 (48%), Gaps = 2/322 (0%)
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
VFD++P++N VS+ +I GY EA +F RL G + + F VL +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
+ +HG V + G G N F+ T+L+D Y+ G + AR VFD++ KD+VSW+ MI
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
YA N EAL+ F M+ KP +T GVL AC L + G + + + +
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
+G L+++Y +CG A + F +M D + W+ ++S + +G + A +F Q+ +
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLD 386
+ PN TF +L +D + + L+ + ++ + G ++
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKA-GLSTDVFVSNALMACYAKCGCIE 300
Query: 387 EAHELIKSMPMEPNAIVWGALL 408
++ EL +++ + N + W ++
Sbjct: 301 QSMELFEALS-DRNDVSWNTII 321
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/608 (39%), Positives = 377/608 (62%), Gaps = 4/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI F + A++ + M G++P FT V+ ACA LG + H L++K+G
Sbjct: 116 MITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSG 175
Query: 61 LDCDEFVKTSLLNLYVHC---GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE-EAI 116
LD D V SL+++Y C G + DA KVFD +P NV+SWTAII+GY+ G + EAI
Sbjct: 176 LDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAI 235
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F ++ +KP+ F+ VL AC L D+ + ++ V + V SL+ +Y
Sbjct: 236 ELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMY 295
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
++CGNME AR+ FD + EK++VS+++++ YA + +EA ++F ++ +T
Sbjct: 296 SRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFA 355
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
+LS +S+GA+ G S + ++ F SN + LI MY++CG + A +VF EM D
Sbjct: 356 SLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDG 415
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ + W ++++G + +G+ A F ++ + G+ PN T++ +L C+H GL+ EG + F
Sbjct: 416 NVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHF 475
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
SM + P +EHY C+VDLLGRSG L+EA EL+ SMP + +A+V L CR+H
Sbjct: 476 KSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGN 535
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
DL +H ++ +P + Y+LLSN+++++ +W + A+IR M ++ + K GCSW+E
Sbjct: 536 MDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIE 595
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
V+ VH+F VGD SHP +++IY +LD+LA K+K G++P+TD VL D+EEE+K+ +L H
Sbjct: 596 VENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQH 655
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEK+A+A+G I+T+ IR+ KNLRVCGDCH A K S + +EI++RD NRFH F +G
Sbjct: 656 SEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDG 715
Query: 597 SCSCKDFW 604
+CSC D+W
Sbjct: 716 TCSCNDYW 723
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 241/453 (53%), Gaps = 10/453 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + +N+ AI + M GF P + F V +AC+ + + LG ++K G
Sbjct: 13 LISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTG 72
Query: 61 -LDCDEFVKTSLLNLYVHC-GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+ D V +L++++V G L A KVFD +PD+NVV+WT +I+ + G +A+++
Sbjct: 73 YFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDL 132
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++ G PD F++ V++AC ++G LS + H V ++G +V V SLVD+YAK
Sbjct: 133 FLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAK 192
Query: 179 C---GNMEKARRVFDQMPEKDIVSWSSMIQGYA-SNGFPKEALDMFYNMQRENLKPEYYT 234
C G+++ AR+VFD+MP +++SW+++I GY S G +EA+++F M + +KP ++T
Sbjct: 193 CVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFT 252
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
VL ACA+L + LG + + + S +G +LI MY++CG M A K F +
Sbjct: 253 FSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLF 312
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+K+ V +N +V+ + + + AF +F ++E G N TF LL G + G + +G Q
Sbjct: 313 EKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQ 372
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + + + ++ + R G ++ A ++ M + N I W +++ G H
Sbjct: 373 IHSRILKS-GFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISWTSMITGFAKH 430
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A +++ LE S N V + SA
Sbjct: 431 GFATRALETFHKM--LEAGVSPNEVTYIAVLSA 461
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 182/356 (51%), Gaps = 39/356 (10%)
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
+++VSW+A+IS Y N EAI+ F +L G P+ + V AC+ ++S K I
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 154 HGYVNEAGK-GRNVFVATSLVDLYAKC-GNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
G++ + G +V V +L+D++ K G++E A +VFD+MP++++V+W+ MI + G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
F ++A+D+F +M P+ +T+ GV+SACA +G L LG + ++ + +G
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184
Query: 272 TLIDMYAKC---GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV-KVAFGVFGQLEKC 327
+L+DMYAKC G + A KVF M + + W A+++G +G + A +F ++ +
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFF---------------NSMSRVFSLTPMIEH- 371
++PN TF +L C + + G Q + NS+ ++S +E+
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENA 304
Query: 372 --------------YGCMVDLLGRSGQLDEAHEL---IKSMPMEPNAIVWGALLAG 410
Y +V+ +S +EA EL I+ NA + +LL+G
Sbjct: 305 RKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSG 360
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 11/224 (4%)
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
++D+VSWS++I YA+N EA+ F++M P Y GV AC++ + LG
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 254 ASSFMERNEFLSNPV-LGTTLIDMYAKC-GRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
F+ + + + V +G LIDM+ K G + A KVF M D++ V W +++
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SMSRVFSLTPMIE 370
G+ + A +F + G P+ T G++ C GL+ GRQF M L +
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV- 182
Query: 371 HYGC-MVDLLGR---SGQLDEAHELIKSMPMEPNAIVWGALLAG 410
GC +VD+ + G +D+A ++ MP+ N + W A++ G
Sbjct: 183 --GCSLVDMYAKCVADGSVDDARKVFDRMPVH-NVMSWTAIITG 223
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/670 (38%), Positives = 382/670 (57%), Gaps = 66/670 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ F +AI + M +E P+ FT VL +CA +G + HS +VK G
Sbjct: 113 IIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLG 172
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
L V TSLLN+Y CG A VFD
Sbjct: 173 LGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFE 232
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLKPDSFSIVRVLTACTQLGDLS 148
+PD+++VSW ++ISGY +G EA+ +F ++L+ LKPD+F++ +L+AC L L+
Sbjct: 233 KMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLN 292
Query: 149 TAKWIHGYVNEA---------------------------------GKGRNVFVATSLVDL 175
K IH Y+ A N+ TSL+D
Sbjct: 293 IGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDG 352
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y K GN++ AR +F+++ ++D+V+W++MI GY NG +AL++F M E +P YT+
Sbjct: 353 YTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTL 412
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+LS +SL LE G + + S P + LI MYAK G + A +VF
Sbjct: 413 AAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNG 472
Query: 296 KDQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
K ++V W +++ L+ +G K A +F ++ G++P+ T+VG+L CTH GLV++GR+
Sbjct: 473 KKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRK 532
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++N M+ V + P + HY CM+DL GR+G L EA+ I+SMP+EP+ I WG+LLA C++H
Sbjct: 533 YYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K DLA+ +L+ ++P NSG Y+ L+N+YSA KW +AA+ R +M D+G++K +G SW
Sbjct: 593 KNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISW 652
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+ + VH F V D HP ++IY + E+ ++K GF+P T+ VL D+EEE K+ L
Sbjct: 653 IHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILK 712
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFGL+ T +RI KNLRVC DCH AIK ISK+ GREIIVRD RFH F
Sbjct: 713 YHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFK 772
Query: 595 EGSCSCKDFW 604
+GSCSC+D+W
Sbjct: 773 DGSCSCRDYW 782
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 209/479 (43%), Gaps = 99/479 (20%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
F +L+ R D G H I+K GL ++ +L+ Y G L A VFD++P
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 93 DKNVVSWTAIISGYINEGNLE-------------------------------EAINMFRR 121
K+ SW +ISGY +GN E AI MF +
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
++ + P F++ VL++C L + IH +V + G G V VATSL+++YAKCG+
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 182 MEKARRVFD-------------------------------QMPEKDIVSWSSMIQGYASN 210
A+ VFD +MP++DIVSW+SMI GY+
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 211 GFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
G+ EAL +F M E +LKP+ +T+ +LSACA+L L +G +++ R E ++ +
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 270 GTTLIDMYAKC---------------------------------GRMAQACKVFREMKDK 296
G LI MYAK G + A ++F +++D+
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
D V W A++ G NG A +F + G +PN T +L + +++ G+Q
Sbjct: 373 DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIH 432
Query: 357 NSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
S + S TP + + ++ + ++G ++ A + + + W +++ H
Sbjct: 433 ASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQH 489
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/616 (41%), Positives = 376/616 (61%), Gaps = 39/616 (6%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRS---------HSLIVKAGLDCDEFVKTSLLNLYVHC 78
P + + P LK+ ++ L RS H+ +++ G D F+ LL C
Sbjct: 35 PNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKC 94
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
+ A ++F + NV +TA+I G+++ GN EAI ++ R+LH + PD++ + +L
Sbjct: 95 HAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASIL 154
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE---- 194
AC L + +H + G N V +++LY KCG + ARRVF++MPE
Sbjct: 155 KACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVA 214
Query: 195 --------------------------KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
KD V W++MI G+ N AL+ F MQ EN+
Sbjct: 215 STVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENV 274
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+P +T+V VLSAC+ LGALE+G W S+M + E N +G LI+MY++CG + +A
Sbjct: 275 RPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQT 334
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF EMKD+D + +N ++SGLSMNG + A +F + ++P TFVG+L C+H GL
Sbjct: 335 VFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGL 394
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
VD G + F+SM+R + + P IEHYGCMVDLLGR G+L+EA++LI++M M P+ I+ G LL
Sbjct: 395 VDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLL 454
Query: 409 AGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQK 468
+ C++HK +L E V +L +SG YVLLS++Y++S KW +AA++R+ M + G+QK
Sbjct: 455 SACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQK 514
Query: 469 IRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEE 528
GCS +EV+ +HEFL+GD HP E+IY KL+EL L+ G+ P + VL DIE+ E
Sbjct: 515 EPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGE 574
Query: 529 KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNN 588
K++ LA HSE+LA+ +GLI+T P +IR+ KNLRVC DCH AIKLI+KIT R+I+VRD N
Sbjct: 575 KEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRN 634
Query: 589 RFHCFIEGSCSCKDFW 604
RFH F G+CSC D+W
Sbjct: 635 RFHYFENGACSCGDYW 650
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 200/372 (53%), Gaps = 35/372 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GFVS+ + AI+ Y+ M +E LP N+ +LKAC + + G HS +K G
Sbjct: 118 LIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLG 177
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--------------------------- 93
+ V+ ++ LY CG L DA +VF+++P+
Sbjct: 178 FSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSR 237
Query: 94 ---KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
K+ V WTA+I G++ A+ FR + ++P+ F+IV VL+AC+QLG L
Sbjct: 238 VRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG 297
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+W+H Y+ + N+FV +L+++Y++CG++++A+ VFD+M ++D++++++MI G + N
Sbjct: 298 RWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMN 357
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G ++A+++F M L+P T VGVL+AC+ G ++ G M R+ + P +
Sbjct: 358 GKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARD-YRVEPQIE 416
Query: 271 --TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
++D+ + GR+ +A + R MK D ++ ++S M+ +++ V +LE
Sbjct: 417 HYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDR 476
Query: 328 GIQPNGNTFVGL 339
G Q + T+V L
Sbjct: 477 G-QADSGTYVLL 487
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 140/296 (47%), Gaps = 36/296 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GFV N+ A+E + M+ E P FT VL AC++ ++G HS + K
Sbjct: 249 MIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE 308
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ + FV +L+N+Y CG + +A VFD++ D++V+++ +ISG G +AI +FR
Sbjct: 309 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFR 368
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL-YAKC 179
++ R L+P + + V VL AC+ G LVD +
Sbjct: 369 VMVGRRLRPTNVTFVGVLNACSHGG--------------------------LVDFGFEIF 402
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+M + RV E I + M+ G +EA D+ M+ + P++ + +L
Sbjct: 403 HSMARDYRV-----EPQIEHYGCMVDLLGRVGRLEEAYDLIRTMK---MTPDHIMLGTLL 454
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
SAC LELG + +E + ++ L +YA G+ +A +V +MK+
Sbjct: 455 SACKMHKNLELGEQVAKELE-DRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKE 509
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/636 (38%), Positives = 379/636 (59%), Gaps = 32/636 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++R F ++ + Y +R GF F+FP +LKA ++ LG+ H L K G
Sbjct: 86 LLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFG 145
Query: 61 L-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D F++++L+ +Y CG + DA +FD + ++VV+W +I GY + + + ++
Sbjct: 146 FFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLY 205
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G +PD+ + VL+AC G+LS K IH ++ + G + TSLV++YA C
Sbjct: 206 EEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANC 265
Query: 180 GNMEKARRVFDQMP-------------------------------EKDIVSWSSMIQGYA 208
G M AR V+DQ+P EKD+V WS+MI GYA
Sbjct: 266 GAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYA 325
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+ P EAL +F MQR + P+ TM+ V+SACA++GAL W ++ ++N F
Sbjct: 326 ESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLP 385
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ LIDMYAKCG + +A +VF M K+ + W+++++ +M+G A +F ++++
Sbjct: 386 INNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQN 445
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
I+PNG TF+G+L C+HAGLV+EG++FF+SM ++P EHYGCMVDL R+ L +A
Sbjct: 446 IEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKA 505
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
ELI++MP PN I+WG+L++ C+ H + +L E +L+ LEP + G V+LSNIY+
Sbjct: 506 MELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKE 565
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
+W+D +R +M KG+ K + CS +EV+ VH F++ D H S++IY KLD + ++L
Sbjct: 566 KRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQL 625
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
K G+ P+T +L D+EEEEK+ + HSEKLAL +GLI + IRI KNLR+C DCH
Sbjct: 626 KLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCH 685
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+KL+SK+ EI++RD RFH F G CSC+D+W
Sbjct: 686 SFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/605 (40%), Positives = 364/605 (60%), Gaps = 22/605 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+VSN + +E Y M G T VL CA LG HSL +K+
Sbjct: 222 MISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKST 281
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +LL++Y CG L AL+VF+ + ++NVVSWT++I+GY +G + AI + +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQ 341
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+K D + +L AC + G L K +H Y+ N+FV +L+D+Y KCG
Sbjct: 342 QMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCG 401
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M+ A VF M KDI+SW++MI LKP+ TM +L
Sbjct: 402 SMDGANSVFSTMVVKDIISWNTMIG---------------------ELKPDSRTMACILP 440
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL ALE G ++ RN + S+ + L+D+Y KCG + A +F + KD V
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 500
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++SG M+GY A F ++ GI+P+ +F+ +L C+H+GL+++G +FF M
Sbjct: 501 WTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
F++ P +EHY CMVDLL R+G L +A+E I+++P+ P+A +WGALL GCR++ +LA
Sbjct: 561 NDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELA 620
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V ++ LEP N+G YVLL+NIY+ + KW + ++R +G KG++K GCSW+E+ G
Sbjct: 621 EKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGK 680
Query: 481 VHEFLVGDN-SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V+ F+ G+N SHP S+KI S L ++ K+K G+ P T + L + +E +K+ L HSEK
Sbjct: 681 VNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEK 740
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL+ P+ +R+ KNLRVCGDCHE K +SK T REI++RD+NRFH F G CS
Sbjct: 741 LAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCS 800
Query: 600 CKDFW 604
C+ FW
Sbjct: 801 CRGFW 805
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 211/472 (44%), Gaps = 81/472 (17%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ VL+ CA G + HS+I + DE + L++LY CG L + +VFD +
Sbjct: 101 TYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTM 160
Query: 92 PDKNV---------------------------------------------------VSWT 100
KNV +SW
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220
Query: 101 AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
++ISGY++ G E + +++++++ G+ D +I+ VL C G LS K +H ++
Sbjct: 221 SMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
R + + +L+D+Y+KCG+++ A RVF++M E+++VSW+SMI GY +G A+ +
Sbjct: 281 TFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLL 340
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
M++E +K + +L ACA G+L+ G +++ N SN + L+DMY KC
Sbjct: 341 QQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKC 400
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G M A VF M KD + WN ++ L +P+ T +L
Sbjct: 401 GSMDGANSVFSTMVVKDIISWNTMIGEL---------------------KPDSRTMACIL 439
Query: 341 CGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP 399
C ++ G++ + R +S + + +VDL + G L A L +P
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVAN--ALVDLYVKCGVLGLARLLFDMIP-SK 496
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSASH 449
+ + W +++G +H + A N++ +EP +S +Y+ SH
Sbjct: 497 DLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEP---DEVSFISILYACSH 545
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 166/376 (44%), Gaps = 55/376 (14%)
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
D+ V + A I + GNLE A+ + L+ ++S VL C L+ K
Sbjct: 63 DRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTYS--SVLQLCAGSKSLTDGKK 120
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM-------------------- 192
+H + + + LV LYA CG++++ RRVFD M
Sbjct: 121 VHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 193 --------------------PE-----------KDIVSWSSMIQGYASNGFPKEALDMFY 221
PE +D++SW+SMI GY SNG + L+++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK 240
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
M + + T++ VL CA+ G L LG S ++ F TL+DMY+KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCG 300
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
+ A +VF +M +++ V W ++++G + +G A + Q+EK G++ + +L
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILH 360
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C +G +D G+ + + + ++ + ++D+ + G +D A+ + +M ++ +
Sbjct: 361 ACARSGSLDNGKDVHDYI-KANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVK-DI 418
Query: 402 IVWGALLAGCRLHKKT 417
I W ++ + +T
Sbjct: 419 ISWNTMIGELKPDSRT 434
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 256/631 (40%), Positives = 377/631 (59%), Gaps = 42/631 (6%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS----HSLIVKAGLDCDEFV 67
+ A+ Y M G P +TFP +LKA AR H+ +V+ G+ + V
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 68 KTSLLNLYVHCGYLADALKVFD--DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
+SL+ Y G A A + D P V+W A+ISG+ G E+ F +
Sbjct: 61 ASSLVAAYTAGGDGAAARALVGECDTP----VAWNALISGHNRGGRFGESCGSFVDMARA 116
Query: 126 GLKPDSFSIVRVLTACTQ-LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM-- 182
G P + V VL+AC + D+ +HG V +G ++ V +LVD+YA+C +M
Sbjct: 117 GAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGS 176
Query: 183 -----------------------------EKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
++AR +FD+MPE+D VSW++MI GY
Sbjct: 177 AWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARF 236
Query: 214 KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
+EAL+MF MQ N+ + +TMV V++ACA LGALE+G W +M R + +G L
Sbjct: 237 REALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNAL 296
Query: 274 IDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
IDMY+KCG + +A VF+ M +D+ W A++ GL++NGY + A +F ++ + P+
Sbjct: 297 IDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDE 356
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
TF+G+L CTHAGLVD+GR+FF SM +++ P + HYGC++DLLGR+G++ EA + I
Sbjct: 357 VTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTID 416
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWND 453
MPM PN+ +WG LLA CR+H +++ E V +L+ L+P NS Y+LLSNIY+ ++W D
Sbjct: 417 QMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWED 476
Query: 454 AAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF 513
++R + +KGI+K GCS +E+DG++HEF+ GD SHP+S++IYSKL+ + + L G+
Sbjct: 477 VRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGY 536
Query: 514 VPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKL 573
P V ++ E+EK+ L HSEKLA+AF L+++ P VIRI KNLR+C DCH AIKL
Sbjct: 537 FPDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKL 596
Query: 574 ISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IS++ GRE++VRD RFH F G CSCKD+W
Sbjct: 597 ISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 174/346 (50%), Gaps = 34/346 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKA 59
+I G F + + M G PT T+ VL AC + D LG++ H +V +
Sbjct: 93 LISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGS 152
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWT------------------- 100
G+ D V+ +L+++Y C + A KVFD + ++VVSWT
Sbjct: 153 GVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLF 212
Query: 101 ------------AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
A+I GY+ EA+ MFR + + + D F++V V+TAC QLG L
Sbjct: 213 DRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALE 272
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+W+ Y++ G + FV +L+D+Y+KCG++E+A VF M +D +W+++I G A
Sbjct: 273 MGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLA 332
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV-WASSFMERNEFLSNP 267
NG+ +EA++MF+ M R + P+ T +GVL+AC G ++ G + S +E N
Sbjct: 333 VNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNV 392
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNG 312
V +ID+ + G++ +A +M + +W +++ ++G
Sbjct: 393 VHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHG 438
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/592 (42%), Positives = 365/592 (61%), Gaps = 1/592 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A++ M+ EG P + T VL G H V+ D V T LL+
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF-RRLLHRGLKPDSF 132
+Y C L A K+FD + +N VSW+A+I GY+ ++EA+ +F + +L + P
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPV 313
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++ VL AC +L DLS + +H Y+ + G ++ + +L+ +YAKCG ++ A R FD M
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXM 373
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
KD VS+S+++ G NG AL +F MQ + P+ TM+GVL AC+ L AL+ G
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 433
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ ++ F ++ ++ LIDMY+KCG+++ A +VF M D V WNA++ G ++G
Sbjct: 434 CSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHG 493
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
A G+F L G++P+ TF+ LL C+H+GLV EGR +F++MSR FS+ P +EH
Sbjct: 494 LGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHC 553
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEP 432
CMVD+LGR+G +DEAH I++MP EP+ +W ALL+ CR+HK +L E V ++ +L P
Sbjct: 554 ICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGP 613
Query: 433 WNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHP 492
++GN+VLLSNIYSA+ +W+DAA IR D G++KI GCSW+E++G+VH F+ GD SH
Sbjct: 614 ESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHL 673
Query: 493 LSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPK 552
+I KL+EL ++K G+ V D+EEEEK+ L HSEKLA+AFG++
Sbjct: 674 QLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAG 733
Query: 553 DVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I + KNLRVCGDCH AIK ++ IT REI VRD NRFH F G+C+C DFW
Sbjct: 734 RPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/435 (33%), Positives = 232/435 (53%), Gaps = 11/435 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + N F AI+ Y+SM + G P +T+PFVLKAC+ + GV HS G
Sbjct: 80 IIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFG 139
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV T+L++ Y CG L +A ++F + ++VV+W A+I+G G ++A+ +
Sbjct: 140 LESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIM 199
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ P+S +IV VL + L K +HGY V V T L+D+YAKC
Sbjct: 200 QMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQ 259
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLKPEYYTMVGVL 239
+ AR++FD M ++ VSWS+MI GY + KEAL++F M ++ + P T+ VL
Sbjct: 260 CLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVL 319
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACA L L G ++ + + + +LG TL+ MYAKCG + A + F M KD V
Sbjct: 320 RACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSV 379
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS- 358
++A+VSG NG VA +F ++ GI P+ T +G+L C+H + G F S
Sbjct: 380 SFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG---FCSH 436
Query: 359 ---MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
+ R F+ +I ++D+ + G++ A E+ M + + W A++ G +H
Sbjct: 437 GYLIVRGFATDTLI--CNALIDMYSKCGKISFAREVFNRMDRH-DIVSWNAMIIGYGIHG 493
Query: 416 KTDLAEHVLNQLIAL 430
A + + L+AL
Sbjct: 494 LGMEALGLFHDLLAL 508
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 202/400 (50%), Gaps = 5/400 (1%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+AC + + H +K + D V L LY+ C + A ++FD+IP+ +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
V+ W II Y G + AI+++ +LH G++P+ ++ VL AC+ L + IH
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ G +VFV T+LVD YAKCG + +A+R+F M +D+V+W++MI G + G +
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
A+ + MQ E + P T+VGVL AL G + R F + V+GT L+D
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQPNGN 334
MYAKC + A K+F M +++V W+A++ G + +K A +F Q+ K + P
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPV 313
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
T +L C + GR+ + ++ + ++ ++ + + G +D+A
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLG-NTLLSMYAKCGVIDDAIRFFDX 372
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLN--QLIALEP 432
M +++ + A+++GC + +A + QL ++P
Sbjct: 373 MN-PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDP 411
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 162/329 (49%), Gaps = 9/329 (2%)
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
+ +L AC Q L+ AK IH + + + V L LY C + ARR+FD++P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
++ W+ +I+ YA NG A+D++++M ++P YT VL AC+ L A+E GV
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
S + S+ + T L+D YAKCG + +A ++F M +D V WNA+++G S+ G
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
A + Q+++ GI PN +T VG+L A + G+ R ++ G
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG- 250
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI---ALE 431
++D+ + L A ++ M + N + W A++ G A + +Q+I A++
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSM 460
P V L ++ A K D ++ R +
Sbjct: 310 P----TPVTLGSVLRACAKLTDLSRGRKL 334
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 265/674 (39%), Positives = 375/674 (55%), Gaps = 98/674 (14%)
Query: 28 PTNFTFPFVLKACA-REHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLA---- 82
P ++T+P +L+ CA R +F+ G + H+ V +G D D +V+ +L+NLY CG +
Sbjct: 103 PDSYTYPILLQCCAARVSEFE-GRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARR 161
Query: 83 ---------------------------DALKVFDDIPDKN-------------------- 95
+A +VF+ +P++N
Sbjct: 162 VFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKA 221
Query: 96 -------------VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT 142
+VSW+A++S Y EEA+ +F + G+ D +V L+AC+
Sbjct: 222 RRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACS 281
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD------------ 190
++ ++ +W+HG + G V + +L+ LY+ CG + ARR+FD
Sbjct: 282 RVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWN 341
Query: 191 --------------------QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
MPEKD+VSWS+MI GYA + EAL +F MQ ++P
Sbjct: 342 SMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRP 401
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ +V +SAC L L+LG W +++ RN+ N +L TTLIDMY KCG + A +VF
Sbjct: 402 DETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVF 461
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M++K WNAV+ GL+MNG V+ + +F ++K G PN TF+G+L C H GLV+
Sbjct: 462 YAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVN 521
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+GR +FNSM + I+HYGCMVDLLGR+G L EA ELI SMPM P+ WGALL
Sbjct: 522 DGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGA 581
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CR H+ ++ E + +LI L+P + G +VLLSNIY++ W + +IR +M G+ K
Sbjct: 582 CRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTP 641
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
GCS +E +G VHEFL GD +HP I LD +A KLK G+VPTT V DI+EEEK+
Sbjct: 642 GCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKE 701
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L HSEKLA+AFGLIT +P IR+ KNLR+C DCH +KLISK R+I+VRD +RF
Sbjct: 702 TALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRF 761
Query: 591 HCFIEGSCSCKDFW 604
H F G+CSC DFW
Sbjct: 762 HHFKHGACSCMDFW 775
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 172/339 (50%), Gaps = 34/339 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + N+ + A+ + M+ G L AC+R + ++G H L VK G
Sbjct: 241 MVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVG 300
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDD------------------------------ 90
++ +K +L++LY CG + DA ++FDD
Sbjct: 301 VEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLF 360
Query: 91 --IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+P+K+VVSW+A+ISGY EA+ +F+ + G++PD ++V ++ACT L L
Sbjct: 361 YSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLD 420
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
KWIH Y++ NV ++T+L+D+Y KCG +E A VF M EK + +W+++I G A
Sbjct: 421 LGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLA 480
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV-WASSFMERNEFLSNP 267
NG +++L+MF +M++ P T +GVL AC +G + G + +S + ++ +N
Sbjct: 481 MNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANI 540
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
++D+ + G + +A ++ M D W A++
Sbjct: 541 KHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALL 579
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 181/421 (42%), Gaps = 80/421 (19%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD---ALKVF 88
T +L++C F+ + S + GL D + + L+N H L +L++F
Sbjct: 5 TLDSLLQSCKCPRHFKQLL---SQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIF 61
Query: 89 DDIPDKNVVSWTAIISGYIN-EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
+ + + N +W I+ ++ + + +A+ ++ L KPDS++ +L C
Sbjct: 62 NHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSE 121
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ +H + +G +V+V +L++LYA CG++ ARRVF++ P D+VSW++++ GY
Sbjct: 122 FEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGY 181
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
G +EA +F M ERN SN
Sbjct: 182 VQAGEVEEAERVFEGMP----------------------------------ERNTIASN- 206
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREM--KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
++I ++ + G + +A ++F + +++D V W+A+VS N + A +F +++
Sbjct: 207 ----SMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMK 262
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGR----------------------QFFNSMSRVF 363
G+ + V L C+ V+ GR ++S +
Sbjct: 263 GSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIV 322
Query: 364 SLTPMIEHYGCMVDLLG---------RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + G ++DL+ R G + +A L SMP E + + W A+++G H
Sbjct: 323 DARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMP-EKDVVSWSAMISGYAQH 381
Query: 415 K 415
+
Sbjct: 382 E 382
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/604 (41%), Positives = 367/604 (60%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N C A + M+ EGF+P + T+ +L ++ H V+ G
Sbjct: 306 MIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVG 365
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D V ++ +++Y+ CG + DA +FD + +NV +W A+I G + EA+++F
Sbjct: 366 LVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFL 425
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G PD+ + V +L+A L K +H Y +AG ++ V +LV +YAKCG
Sbjct: 426 QMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCG 484
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N A++VFD M E+++ +W+ MI G A +G EA +F M RE + P+ T V +LS
Sbjct: 485 NTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILS 544
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACAS GALE S +S+ +G L+ MYAKCG + A +VF +M ++D
Sbjct: 545 ACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYS 604
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++ GL+ +G A +F +++ G +PNG +FV +L C+HAGLVDEGR+ F S++
Sbjct: 605 WTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLT 664
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + P +EHY CMVDLLGR+GQL+EA I +MP+EP WGALL C + ++A
Sbjct: 665 QDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMA 724
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + + L+P ++ YVLLSNIY+A+ W +RSMM +GI+K G SW+EVD
Sbjct: 725 EFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQ 784
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H F+VGD SHP S++IY+KL +L +LKA G+VP T VL + ++E K+ L HSEKL
Sbjct: 785 IHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKL 844
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+ +GL+ T ++ IR+ KNLRVC DCH A K ISK+TGREI+ RD RFH F +G CSC
Sbjct: 845 AIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSC 904
Query: 601 KDFW 604
D+W
Sbjct: 905 GDYW 908
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/417 (33%), Positives = 219/417 (52%), Gaps = 4/417 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A++ Y+ MR EG P T+ +LKAC + G + H+ I+++G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V+T+L+N+YV CG + DA +FD + ++NV+SWT +I G + G +EA + F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G P+S++ V +L A G L K +H + AG ++ V +LV +YAK G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ AR VFD M E+DI SW+ MI G A +G +EA +F M+R P T + +L+
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 241 ACA--SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
A A S GALE + F+S+ +G LI MYAKCG + A VF M D+D
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ WNA++ GL+ NG AF +F ++++ G P+ T++ LL G + ++
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKH 360
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
V L + V + R G +D+A + + + N W A++ G K
Sbjct: 361 AVEV-GLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGGVAQQK 415
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 219/451 (48%), Gaps = 6/451 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLG--VRSHSLIVK 58
MI G + Q A + M G LP T+ +L A A L H K
Sbjct: 203 MIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGK 262
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
AG D V +L+++Y CG + DA VFD + D++V+SW A+I G G EA +
Sbjct: 263 AGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTI 322
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++ G PDS + + +L G K +H + E G ++ V ++ V +Y +
Sbjct: 323 FLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIR 382
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG+++ A+ +FD++ +++ +W++MI G A +EAL +F M+RE P+ T V +
Sbjct: 383 CGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNI 442
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
LSA ALE S+ + L + +G L+ MYAKCG A +VF +M +++
Sbjct: 443 LSANVGEEALEWVKEVHSY-AIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNV 501
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
W ++SGL+ +G AF +F Q+ + GI P+ T+V +L C G ++ ++ +S
Sbjct: 502 TTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKE-VHS 560
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ L + +V + + G +D+A + M +E + W ++ G H +
Sbjct: 561 HAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQHGRGL 619
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
A + ++ LE + Y ++ + + SH
Sbjct: 620 DALDLFVKM-KLEGFKPNGYSFVAVLSACSH 649
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/603 (41%), Positives = 371/603 (61%), Gaps = 4/603 (0%)
Query: 5 FVSNDCFQHAIEFYNSMRNEGFLP---TNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
F + F H++ + + + F P T++ + +L++C G + H+ G+
Sbjct: 19 FPFSQSFYHSLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGI 78
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
++ + T L++LY L +A +FD IP +N+ W +I GY G + AI ++ +
Sbjct: 79 AYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHK 138
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+L GL+PD+F++ VL AC+ L + + IH YV ++G R++FV +L+D+YAKCG
Sbjct: 139 MLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGC 198
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ A RVFD++ +D V W+SM+ YA NG P E++ + M ++P T+V V+S+
Sbjct: 199 VMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISS 258
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
A + L G F R+ F SN + T LIDMYAKCG + A +F +++K V W
Sbjct: 259 SADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSW 318
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA+++G +M+G A +F ++ K +P+ TFVG+L C+ L+DEGR +N M R
Sbjct: 319 NAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVR 377
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+ +TP ++HY CM+DLLG GQLDEA++LI++M ++P++ VWGALL C++H +LAE
Sbjct: 378 DYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAE 437
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
L +LI LEP +SGNYV+L+N+Y+ S KW K+R +M DK I+K CSW+EV V
Sbjct: 438 LALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKV 497
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
+ FL GD SH S+ IY++L L + AG+ P T V D+EE+EK + HSE+LA
Sbjct: 498 YAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLA 557
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+AFGLI+T+P + I KNLR+C DCH AIK ISKI REI VRD NR+H F G CSC
Sbjct: 558 IAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCG 617
Query: 602 DFW 604
D W
Sbjct: 618 DHW 620
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 197/339 (58%), Gaps = 3/339 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ N +AI Y+ M + G P NFT PFVLKAC+ G H ++K+G
Sbjct: 119 LIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSG 178
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+++Y CG + DA +VFD I ++ V W ++++ Y G+ +E+I++ R
Sbjct: 179 WERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCR 238
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++P ++V V+++ + L + IHG+ G N V T+L+D+YAKCG
Sbjct: 239 EMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCG 298
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A +F+++ EK +VSW+++I GYA +G ALD+F M++E+ +P++ T VGVL+
Sbjct: 299 SVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLA 357
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMKDK-DQ 298
AC+ L+ G + M R+ ++ V T +ID+ CG++ +A + R M K D
Sbjct: 358 ACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDS 417
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
VW A+++ ++G V++A +L + +GN +
Sbjct: 418 GVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVI 456
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/606 (39%), Positives = 372/606 (61%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ + N+ F+ A+ ++ + + P NFT P V+KACA D LG H + K
Sbjct: 178 IVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKM 237
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALK-VFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
L D FV +L+ +Y CG + +A+K VFD + K V SW A++ GY + +A+++
Sbjct: 238 DLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDL 297
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ ++ GL PD F+I +L AC+++ L + IHG+ G + F+ SL+ LY
Sbjct: 298 YLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYIC 357
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG A+ +FD M + +VSW+ MI GY+ NG P EA+++F M + ++P ++ V
Sbjct: 358 CGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCV 417
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
AC+ L AL LG F + + + +++IDMYAK G + + ++F +++KD
Sbjct: 418 CGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDV 477
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WN +++G ++G K A +F ++ + G++P+ TF G+L C+HAGLV++G ++FN
Sbjct: 478 ASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQ 537
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + ++ P +EHY C+VD+LGR+G++D+A LI+ MP +P++ +W +LL+ CR+H
Sbjct: 538 MLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLG 597
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E V N+L+ LEP NYVL+SN+++ S KW+D ++R M D G+QK GCSW+EV
Sbjct: 598 LGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVG 657
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
G VH FL+GD P E++ L K+ + G+ P T VL D+EEE+K L HSE
Sbjct: 658 GKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSE 717
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA++FGL+ TA +R+ KNLR+CGDCH A K ISK+ R+I+VRDN RFH F +G C
Sbjct: 718 KLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGIC 777
Query: 599 SCKDFW 604
SC D+W
Sbjct: 778 SCGDYW 783
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 209/398 (52%), Gaps = 5/398 (1%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFV-KTSLLNLYVHCGYLADALKVFDDIPDK 94
+L+AC + D ++G R H ++ + C++FV T ++ +Y CG +D+ VFD + K
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
N+ W AI+S Y E+A+++F L+ KPD+F++ V+ AC L DL + I
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA-RRVFDQMPEKDIVSWSSMIQGYASNGF 212
HG + +VFV +L+ +Y KCG +E+A +RVFD M K + SW++++ GYA N
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
P++ALD++ M L P+++T+ +L AC+ + +L G F RN +P +G +
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS 350
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+ +Y CG+ A +F M+ + V WN +++G S NG A +F Q+ GIQP
Sbjct: 351 LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPY 410
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
+ + C+ + G++ + + LT I ++D+ + G + + +
Sbjct: 411 EIAIMCVCGACSQLSALRLGKE-LHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIF 469
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
+ E + W ++AG +H + A + +++ L
Sbjct: 470 DRL-REKDVASWNVIIAGYGIHGRGKEALELFEKMLRL 506
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/603 (40%), Positives = 363/603 (60%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
I G V + QHA+E M++ G +P FT +LKACA F LG + H +VKA
Sbjct: 275 ISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANA 334
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
D D ++ L+++Y G L DA KVFD IP +++V W A+ISG + EA+++F R
Sbjct: 335 DSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCR 394
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ G + ++ VL + L +S + +H + G + V L+D Y KC
Sbjct: 395 MRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDC 454
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ A RVF++ DI++++SMI + ++A+ +F M R+ L P+ + + +L+A
Sbjct: 455 LNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNA 514
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
CASL A E G + + + +F+S+ G L+ YAKCG + A F + +K V W
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSW 574
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
+A++ GL+ +G+ K A VF ++ I PN T +LC C HAGLVDE +++FNSM
Sbjct: 575 SAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+F + EHY CM+DLLGR+G+LD+A EL+ SMP + NA VWGALLA R+H+ +L
Sbjct: 635 MFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGR 694
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
+L LEP SG +VLL+N Y+++ W+D AK+R +M D ++K SWVE+ V
Sbjct: 695 LAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKV 754
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
H F+VGD SHP + IY+KLDEL + AG+VP + L D+++ EK+ L+ HSE+LA
Sbjct: 755 HTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLA 814
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+AF LI+T IR+ KNLR+C DCH A K IS I REII+RD NRFH F +G+CSC+
Sbjct: 815 VAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCR 874
Query: 602 DFW 604
D+W
Sbjct: 875 DYW 877
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 229/453 (50%), Gaps = 16/453 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ +V ND HA++ + M G P F F V+ AC D + G + H+++++ G
Sbjct: 173 LMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTG 232
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D F +L+++Y G + A VF +P+ +VVSW A ISG + G+ + A+ +
Sbjct: 233 YDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLL 292
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ GL P+ F++ +L AC G + + IHG++ +A + ++A LVD+YAK G
Sbjct: 293 QMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHG 352
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A++VFD +P++D+V W+++I G + EAL +F M++E T+ VL
Sbjct: 353 LLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLK 412
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+ ASL A+ + E+ FLS+ + LID Y KC + A +VF + D +
Sbjct: 413 STASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIA 472
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS-- 358
+ ++++ LS + + A +F ++ + G+ P+ LL C ++G+Q
Sbjct: 473 FTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532
Query: 359 ----MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
MS VF+ ++ Y + G +++A +P E + W A++ G H
Sbjct: 533 KRQFMSDVFAGNALVYTY-------AKCGSIEDADLAFSGLP-EKGVVSWSAMIGGLAQH 584
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A V ++++ + S N++ ++++ A
Sbjct: 585 GHGKRALDVFHRMV--DEHISPNHITMTSVLCA 615
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 184/355 (51%), Gaps = 4/355 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ + +N + A+ + SMR+ F P VLK CA + F G + H+L + G
Sbjct: 74 LVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAGF--GTQLHALAMATG 130
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
L D FV +L+ +Y G++ +A VFD+ ++N VSW ++S Y+ A+ +F
Sbjct: 131 LGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVF 190
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G++P+ F V+ ACT DL + +H V G ++VF A +LVD+Y+K
Sbjct: 191 GEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKL 250
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ A VF ++PE D+VSW++ I G +G + AL++ M+ L P +T+ +L
Sbjct: 251 GDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSIL 310
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACA GA LG FM + S+ + L+DMYAK G + A KVF + +D V
Sbjct: 311 KACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLV 370
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+WNA++SG S A +F ++ K G N T +L + + RQ
Sbjct: 371 LWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQ 425
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 191/379 (50%), Gaps = 9/379 (2%)
Query: 34 PFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD 93
P + + A + Q G H+ ++K+GL + LL+ Y C A +VFD+IPD
Sbjct: 9 PLLTRYAATQSLLQ-GAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEIPD 65
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
VSW+++++ Y N +A+ FR + ++ + F ++ V+ C D +
Sbjct: 66 PCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEF-VLPVVLKCAP--DAGFGTQL 122
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGF 212
H G G ++FVA +LV +Y G +++AR VFD+ E++ VSW+ ++ Y N
Sbjct: 123 HALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDR 182
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
A+ +F M ++P + V++AC LE G + + R + +
Sbjct: 183 CSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANA 242
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+DMY+K G + A VF ++ + D V WNA +SG ++G+ + A + Q++ G+ PN
Sbjct: 243 LVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPN 302
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
T +L C +G + GRQ M + + + +G +VD+ + G LD+A ++
Sbjct: 303 VFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFG-LVDMYAKHGLLDDAKKVF 361
Query: 393 KSMPMEPNAIVWGALLAGC 411
+P + + ++W AL++GC
Sbjct: 362 DWIP-QRDLVLWNALISGC 379
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI D + AI+ + M +G P F +L ACA ++ G + H+ ++K
Sbjct: 476 MITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D F +L+ Y CG + DA F +P+K VVSW+A+I G G+ + A+++F
Sbjct: 536 FMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFH 595
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAKC 179
R++ + P+ ++ VL AC G + AK + E G R ++DL +
Sbjct: 596 RMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRA 655
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G ++ A + + MP + + W +++
Sbjct: 656 GKLDDAMELVNSMPFQTNAAVWGALL 681
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 25/255 (9%)
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
V L+ Y+KC A +VF E+ D V W+++V+ S N + A G F + C
Sbjct: 38 VFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSC 97
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
++ N +L AG G Q ++++ L I +V + G G +DE
Sbjct: 98 SVRCNEFVLPVVLKCAPDAGF---GTQL-HALAMATGLGGDIFVANALVAMYGGFGFVDE 153
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYVLLSNIY 445
A + E N + W L++ + + A V +++ ++P N + + N
Sbjct: 154 ARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQP-NEFGFSCVVNAC 212
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ S K+ +M+ G K + VD +YSKL ++
Sbjct: 213 TGSRDLEAGRKVHAMVIRTGYDKDVFTANALVD------------------MYSKLGDIR 254
Query: 506 TKLKAAGFVPTTDHV 520
G VP TD V
Sbjct: 255 MAAVVFGKVPETDVV 269
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/635 (39%), Positives = 376/635 (59%), Gaps = 32/635 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ D + A+ + M G P++ T V+ ACA+ D +G R + I + G
Sbjct: 203 LICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELG 262
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L ++ + +L+++Y+ CG + A ++FD+ D+N+V + I+S Y +G EA+ +
Sbjct: 263 LKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILD 322
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L +G +PD +++ ++A QL DL K HGYV G + ++D+Y KCG
Sbjct: 323 EMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCG 382
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNG-----------FPK--------------- 214
E A RVFD M K +VSW+S+ G+ NG P+
Sbjct: 383 KPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQ 442
Query: 215 -----EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+A+++F MQ E +K + TM+G+ SAC LGA EL W +++E+N + L
Sbjct: 443 KSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRL 502
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
T L+DM+A+CG A +VF +M ++D W A + ++M G + A G+F Q+ G+
Sbjct: 503 NTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGV 562
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+P+ FV +L C+H G V++G F+ M ++P IEHYGCMVDLLGR+G L EA
Sbjct: 563 KPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAF 621
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+LIKSMPMEPN +VWG+LLA CR+HK ++A + ++ L P +G +VLLSNIY+++
Sbjct: 622 DLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAG 681
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
KW D A++R + +KG++K+ G S V+V+GV+HEF GD SHP I L E+ +
Sbjct: 682 KWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFS 741
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
AG +P +VL D++E+EK+Y L+ HSEKLA+AFGLI T IR+ KNLR+C DCH
Sbjct: 742 DAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHS 801
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K+ S I REIIVRDNNRFH F +G CSC D+W
Sbjct: 802 FAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/505 (29%), Positives = 251/505 (49%), Gaps = 48/505 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ S + AI Y M G P ++TFPFVL C + F G++ H +VK G
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMG 161
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D F++ L++ Y CG++ KVF+ + ++NVVSWT++I GY +EA+++F
Sbjct: 162 LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFF 221
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++P S ++V V++AC +L DL + + Y+ E G N + +LVD+Y KCG
Sbjct: 222 EMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCG 281
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+R+FD+ ++++V +++++ YA G +EAL + M ++ +P+ TM+ +S
Sbjct: 282 AIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAIS 341
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A L L G ++ RN +G +IDMY KCG+ AC+VF M +K V
Sbjct: 342 ASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVS 401
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++ +G NG V+ A+ VF Q+ + N + ++ G L ++ + F M
Sbjct: 402 WNSLTAGFIRNGDVESAWEVFNQIP----ERNAVFWNTMISGLVQKSLFEDAIELFREMQ 457
Query: 361 ----RVFSLTPM---------------------IEHYG---------CMVDLLGRSGQLD 386
+ +T M IE G +VD+ R G
Sbjct: 458 GEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQ 517
Query: 387 EAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYVLLSNI 444
A ++ M E + W A + + + A + NQ++ ++P + VL +
Sbjct: 518 SAMQVFNKMT-ERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKP----DVVLFVQV 572
Query: 445 YSA-SH--KWNDAAKIRSMMGDKGI 466
+A SH + I S+M D GI
Sbjct: 573 LTACSHGGQVEQGLHIFSLMEDHGI 597
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 193/399 (48%), Gaps = 45/399 (11%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCG------YLADALKVF--DDIPDKNVVSWTAIIS 104
H I K GLD T L+N Y A ++F D D + ++I
Sbjct: 45 HCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSLIR 104
Query: 105 GYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR 164
GY + G EAI ++ R+L G+ P+ ++ VL+ CT++ +HG V + G
Sbjct: 105 GYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEE 164
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+VF+ L+ YA+CG+M+ +VF+ M E+++VSW+S+I GYA PKEA+ +F+ M
Sbjct: 165 DVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMV 224
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
++P TMV V+SACA L L++G +++ N V+ L+DMY KCG +
Sbjct: 225 EAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAID 284
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT--------- 335
A ++F E D++ V++N ++S + G + A + ++ + G +P+ T
Sbjct: 285 AAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASA 344
Query: 336 -----FVGLLCGCTHAGLVDEGRQFFNSMS-----------------RVFSL--TPMIEH 371
F G +C H ++ G + ++S+ RVF L +
Sbjct: 345 QLVDLFYGKVC---HGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVS 401
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + R+G ++ A E+ +P E NA+ W +++G
Sbjct: 402 WNSLTAGFIRNGDVESAWEVFNQIP-ERNAVFWNTMISG 439
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/605 (40%), Positives = 370/605 (61%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI V +D F A Y M+ +G +P T V A H G +SL+
Sbjct: 178 MIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRV 237
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D V S +N++ + G L DA ++F+D+ D++VV+W +I+ Y+ N EA+ +F
Sbjct: 238 MESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFG 297
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RL G+K + + V +L T L L+ K IH V EAG R+V VAT+L+ LY +C
Sbjct: 298 RLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCE 357
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+A ++F M KD+++W+ M YA NGF KEAL +F MQ E +P T+V VL
Sbjct: 358 APGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLD 417
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CA L AL+ G S + N F V+ T LI+MY KCG+MA+A VF +M +D +V
Sbjct: 418 TCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILV 477
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN+++ + +GY +F Q++ G + + +FV +L +H+G V +G Q+F +M
Sbjct: 478 WNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAML 537
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP-MEPNAIVWGALLAGCRLHKKTDL 419
+ FS+TP E YGC+VDLLGR+G++ EA +++ + P+ I+W LL CR H KTD
Sbjct: 538 QDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQ 597
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A+ Q++ +P +SG YV+LSN+Y+A+ W+ ++R +M +G++K G S +E+
Sbjct: 598 AKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILN 657
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VHEFL GD SHP IY++LD L ++++AAG++P T +L D+E+E K+ L HSE+
Sbjct: 658 RVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSER 717
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL++T P +R+ KNLRVC DCH A K ISK+ GREI+VRD +RFH F +G CS
Sbjct: 718 LAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCS 777
Query: 600 CKDFW 604
CKD+W
Sbjct: 778 CKDYW 782
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 214/428 (50%), Gaps = 4/428 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + A+ + M+ E +PT T+ +L ACA + G+ H I++ G
Sbjct: 77 MIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQG 136
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV T+L+N+Y CG + A F + ++VVSWTA+I+ + A ++R
Sbjct: 137 FEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYR 196
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+ P+ ++ V A LS K+I+ V+ +V V S ++++ G
Sbjct: 197 RMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAG 256
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ ARR+F+ M ++D+V+W+ +I Y N EA+ +F +Q++ +K T V +L+
Sbjct: 257 LLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLN 316
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
SL +L G ++ + + V+ T L+ +Y +C QA K+F +M KD +
Sbjct: 317 VYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVIT 376
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS-M 359
W + + NG+ K A +F +++ G +P T V +L C H + +GRQ + +
Sbjct: 377 WTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHII 436
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
F + ++E ++++ G+ G++ EA + + M + + +VW ++L H D
Sbjct: 437 ENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKMA-KRDILVWNSMLGAYAQHGYYDE 493
Query: 420 AEHVLNQL 427
+ NQ+
Sbjct: 494 TLQLFNQM 501
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 157/315 (49%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADAL 85
F P F +L+ C+ + G R H + G + + V L+ +Y CG + +A
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+VF+ + K+V +WT +I Y +G+ + A+ MF ++ + P + V +L AC
Sbjct: 61 QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
L IHG + + G +VFV T+L+++Y KCG++ A F ++ +D+VSW++MI
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
+ A ++ MQ + + P T+ V +A L G + S + S
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMES 240
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ + + ++M+ G + A ++F +M D+D V WN V++ N A +FG+L+
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQ 300
Query: 326 KCGIQPNGNTFVGLL 340
+ GI+ N TFV +L
Sbjct: 301 QDGIKANDITFVLML 315
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 145/283 (51%), Gaps = 2/283 (0%)
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
KPD+ V +L C+ ++ + +H +V + G +N V L+ +YA+CG++ +A+
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
+VF+ + KD+ +W+ MI Y G AL MFY MQ E++ P T V +L+ACAS
Sbjct: 61 QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
+L+ G+ + + F + +GT LI+MY KCG + A F+ ++ +D V W A+++
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
+ +A ++ +++ G+ PN T + + EG+ F S+ +
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGK-FIYSLVSSRVME 239
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ +++ G +G L +A L + M ++ + + W ++
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVIT 281
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/607 (40%), Positives = 381/607 (62%), Gaps = 3/607 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N + A++ ++ M+ EG P FTF VL A + + GV+ H++++K+G
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD FV S++N+Y ++DA VFD + ++N VSW ++I+G++ G EA +F
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+K V+ C + ++S AK +H V + G ++ + T+L+ Y+KC
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343
Query: 181 NMEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGV 238
++ A ++F M +++VSW+++I GY NG A+++F M+RE ++P +T V
Sbjct: 344 EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSV 403
Query: 239 LSACAS-LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
L+ACA+ ++E G S ++ F + + + L+ MYAK G + A +VF+ D+D
Sbjct: 404 LNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRD 463
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WN+++SG + +G K + +F ++ ++ +G TF+G++ CTHAGLV+EG+++F+
Sbjct: 464 LVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFD 523
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
M + + + P +EHY CMVDL R+G L++A +LI MP A +W LLA CR+H
Sbjct: 524 LMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNV 583
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
L E +LI+L+P +S YVLLSNIY+ + W + AK+R +M K ++K G SW+EV
Sbjct: 584 QLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEV 643
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
F+ GD SHP S++IY KL+EL+ +LK AG+ P T +VL D+EEE K+ L+ HS
Sbjct: 644 KNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHS 703
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
E+LA+AFGLI T P I+I KNLRVCGDCH IKLISKI GR+I+VRD+NRFH F GS
Sbjct: 704 ERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGS 763
Query: 598 CSCKDFW 604
CSC D+W
Sbjct: 764 CSCGDYW 770
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 210/414 (50%), Gaps = 7/414 (1%)
Query: 5 FVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCD 64
F ND + A+ + +R G + VLK C D +G + H +K G D
Sbjct: 67 FSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVED 126
Query: 65 EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
V TSL+++Y+ + D +VFD++ KNVVSWT++++GY G E+A+ +F ++
Sbjct: 127 VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQL 186
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G+KP+ F+ VL G + +H V ++G +FV S+V++Y+K +
Sbjct: 187 EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSD 246
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
A+ VFD M ++ VSW+SMI G+ +NG EA ++FY M+ E +K V+ CA+
Sbjct: 247 AKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCAN 306
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV-WNA 303
+ + + +N + + T L+ Y+KC + A K+F M VV W A
Sbjct: 307 IKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTA 366
Query: 304 VVSGLSMNGYVKVAFGVFGQLEK-CGIQPNGNTFVGLLCGCTH-AGLVDEGRQFFN-SMS 360
++SG NG A +F Q+ + G++PN TF +L C V++G+QF + S+
Sbjct: 367 IISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIK 426
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
FS + +V + + G ++ A+E+ K ++ + + W ++++G H
Sbjct: 427 SGFSNALCVS--SALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMISGYAQH 477
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 175/342 (51%), Gaps = 1/342 (0%)
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
++FD+ P + + ++ + +EA+N+F L G D S+ VL C L
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D K +H + G +V V TSLVD+Y K ++E RVFD+M K++VSW+S++
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GY NG ++AL +F MQ E +KP +T VL A+ GA+E GV + + ++ S
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+G ++++MY+K ++ A VF M++++ V WN++++G NG AF +F ++
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
G++ F ++ C + + +Q + + S + MV + ++
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMV-AYSKCSEI 345
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
D+A +L M N + W A+++G + +TD A ++ Q+
Sbjct: 346 DDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQM 387
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 117/226 (51%), Gaps = 2/226 (0%)
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
++++FD+ P++ + + ++ ++ N KEAL++F ++R + ++ VL C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
L +G + F+ + +GT+L+DMY K + +VF EM+ K+ V W ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
++G NG + A +F Q++ GI+PN TF +L G G V++G Q ++M
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ-VHTMVIKSG 223
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
L I MV++ +S + +A + SM NA+ W +++AG
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAG 268
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/605 (41%), Positives = 363/605 (60%), Gaps = 22/605 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+VSN + + Y M G T VL CA LG HSL +K+
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +LL++Y CG L AL+VF+ + ++NVVSWT++I+GY +G + AI + +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQ 341
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+K D +I +L AC + G L K +H Y+ N+FV +L+D+YAKCG
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCG 401
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ME A VF M KDI+SW++MI LKP+ TM VL
Sbjct: 402 SMEAANSVFSTMVVKDIISWNTMIG---------------------ELKPDSRTMACVLP 440
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL ALE G ++ RN + S+ + L+D+Y KCG + A +F + KD V
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 500
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G M+GY A F ++ GI+P+ +F+ +L C+H+GL+++G +FF M
Sbjct: 501 WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
F++ P +EHY CMVDLL R+G L +A+E I+++P+ P+A +WGALL GCR + +LA
Sbjct: 561 NDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELA 620
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V ++ LEP NSG YVLL+NIY+ + KW + ++R +G +G++K GCSW+E+ G
Sbjct: 621 EKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGK 680
Query: 481 VHEFLVGDN-SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V+ F+ G+N SHP S+ I S L ++ K+K G P T + L + +E +K+ L HSEK
Sbjct: 681 VNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEK 740
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL+T P+ IR+ KNLRVCGDCHE K +SK T REI++RD NRFH F +G CS
Sbjct: 741 LAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCS 800
Query: 600 CKDFW 604
C+ FW
Sbjct: 801 CRGFW 805
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 215/472 (45%), Gaps = 81/472 (17%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD-------- 83
T+ VL+ CA F G + HS+I + DE + L++ Y CG L +
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 84 -------------------------------------------ALKVFDDIPDKNVVSWT 100
A ++FD + D++V+SW
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220
Query: 101 AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
++ISGY++ G E + +++++++ G+ D +I+ VL C G LS K +H ++
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
R + + +L+D+Y+KCG+++ A RVF++M E+++VSW+SMI GY +G A+ +
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLL 340
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
M++E +K + + +L ACA G+L+ G +++ N SN + L+DMYAKC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKC 400
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G M A VF M KD + WN ++ L +P+ T +L
Sbjct: 401 GSMEAANSVFSTMVVKDIISWNTMIGEL---------------------KPDSRTMACVL 439
Query: 341 CGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP 399
C ++ G++ + R +S + + +VDL + G L A L +P
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVAN--ALVDLYVKCGVLGLARLLFDMIP-SK 496
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSASH 449
+ + W ++AG +H + A N++ +EP +S +Y+ SH
Sbjct: 497 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP---DEVSFISILYACSH 545
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 164/376 (43%), Gaps = 55/376 (14%)
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
D V + A I + G+LE A+ + L+ ++S VL C L + K
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETKTYS--SVLQLCAGLKSFTDGKK 120
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM-------------------- 192
+H + G + + LV YA CG++++ RRVFD M
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 193 --------------------PE-----------KDIVSWSSMIQGYASNGFPKEALDMFY 221
PE +D++SW+SMI GY SNG + L ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
M + + T++ VL CA+ G L LG S ++ F TL+DMY+KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
+ A +VF +M +++ V W ++++G + +G A + Q+EK G++ + +L
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C +G +D G+ + + + ++ + ++D+ + G ++ A+ + +M ++ +
Sbjct: 361 ACARSGSLDNGKDVHDYI-KANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK-DI 418
Query: 402 IVWGALLAGCRLHKKT 417
I W ++ + +T
Sbjct: 419 ISWNTMIGELKPDSRT 434
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/577 (40%), Positives = 363/577 (62%), Gaps = 1/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + +L C + G H+ I + + D + +LN+Y CG L +A +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD +P K++VSWT +ISGY G EA+ +F ++LH G +P+ F++ +L A
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSD 222
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ +H + + G NV V +SL+D+YA+ +M +A+ +F+ + K++VSW+++I G+
Sbjct: 223 HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH 282
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A G + + +F M R+ +P ++T V +ACAS G+LE G W + + ++
Sbjct: 283 ARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIA 342
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+G TLIDMYAK G + A KVFR + +D V WN+++SG + +G A +F Q+ K
Sbjct: 343 YIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKA 402
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+QPN TF+ +L C+H+GL+DEG+ +F M + + + H+ +VDLLGR+G+L+E
Sbjct: 403 KVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNE 461
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A++ I+ MP++P A VWGALL CR+HK DL + Q+ L+P +SG +VLLSNIY++
Sbjct: 462 ANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYAS 521
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ + +DAAK+R MM + G++K CSWVE++ VH F+ D+SHP+ E+I ++++ K
Sbjct: 522 AGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGK 581
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
+K G+VP T HVLF + +++++ L HSEKLALAF ++ T P IRI KN+R+CGDC
Sbjct: 582 IKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDC 641
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A K S++ GREIIVRD NRFH F+ G CSC+D+W
Sbjct: 642 HSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 182/333 (54%), Gaps = 3/333 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + A+ + M + GF P FT +LKA G + H+ +K G
Sbjct: 177 LISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYG 236
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V +SLL++Y ++ +A +F+ + KNVVSW A+I+G+ +G E + +F
Sbjct: 237 YDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFL 296
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L +G +P F+ V TAC G L KW+H +V ++G ++ +L+D+YAK G
Sbjct: 297 QMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSG 356
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A++VF ++ ++DIVSW+S+I GYA +G EAL +F M + ++P T + VL+
Sbjct: 357 SIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLT 416
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ-V 299
AC+ G L+ G + M++++ + T++D+ + GR+ +A K EM K
Sbjct: 417 ACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAA 476
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
VW A++ M + + GV+ + + P+
Sbjct: 477 VWGALLGSCRM--HKNMDLGVYAAEQIFELDPH 507
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 160/302 (52%), Gaps = 2/302 (0%)
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
L+P+ ++L CT L L + IH ++ + ++ + ++++YAKCG++E+A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
+FD+MP KD+VSW+ +I GY+ +G EAL +F M +P +T+ +L A +
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
+ G +F + + N +G++L+DMYA+ M +A +F + K+ V WNA+++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G + G + +F Q+ + G +P T+ + C +G +++G+ + +
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG-Q 339
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
P+ ++D+ +SG + +A ++ + + ++ + + W ++++G H A + Q
Sbjct: 340 PIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLFEQ 398
Query: 427 LI 428
++
Sbjct: 399 ML 400
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+L+PE +L+ C L L+ G + ++ + F + VL +++MYAKCG + +A
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
+F +M KD V W ++SG S +G A +F ++ G QPN T LL
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219
Query: 347 GLVDEGRQFFNSMSRVFSLT---PMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
GRQ FSL M H G ++D+ R + EA + S+ + N +
Sbjct: 220 PSDHHGRQL-----HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVV 273
Query: 403 VWGALLAGCRLHKKTDLAEHVLNQLIAL 430
W AL+AG H + EHV+ + +
Sbjct: 274 SWNALIAG---HARKGEGEHVMRLFLQM 298
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/627 (40%), Positives = 375/627 (59%), Gaps = 36/627 (5%)
Query: 14 AIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
AI++YN R++ + P V KACA D R H ++ G D + +L+
Sbjct: 61 AIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALI 120
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
++Y C A VF+ +P ++V+SWT++ S Y+N G L EA+ FR++ G +P+S
Sbjct: 121 DMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSV 180
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++ +L ACT L DL + + +HG+V G G NVFV+++LV++YA C ++ +A+ VFD M
Sbjct: 181 TVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSM 240
Query: 193 PEKDIVSWSSMIQGY-----------------------------------ASNGFPKEAL 217
+D VSW+ +I Y NG ++AL
Sbjct: 241 SRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKAL 300
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
++ MQ KP T+ VL AC +L +L G ++ R+ F + T L+ MY
Sbjct: 301 EVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMY 360
Query: 278 AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
AKCG + + +VF M +D V WN ++ SM+G + A +F ++ G++PN TF
Sbjct: 361 AKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFT 420
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
G+L GC+H+ LVDEG F+SMSR S+ P +H+ CMVD+L R+G+L+EA+E IK MP+
Sbjct: 421 GVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPI 480
Query: 398 EPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKI 457
EP A WGALL GCR++K +L N+L +E N GNYVLLSNI ++ W++A++
Sbjct: 481 EPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASET 540
Query: 458 RSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTT 517
R +M D+G+ K GCSW++V VH F+VGD S+ S++IY LD + K++ AG++P T
Sbjct: 541 RKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNT 600
Query: 518 DHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKI 577
D VL D+++EEK+ L HSEKLA+AFG++ + IR+ KNLR+CGDCH AIK ++KI
Sbjct: 601 DFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKI 660
Query: 578 TGREIIVRDNNRFHCFIEGSCSCKDFW 604
G +IIVRD+ RFH F +G CSC+DFW
Sbjct: 661 VGVKIIVRDSLRFHHFRDGLCSCQDFW 687
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 144/290 (49%), Gaps = 1/290 (0%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKP 129
+ +Y + G L A +FD IP ++ +WT +IS G EAI + H+ ++P
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
D ++ V AC L D+ AK +H G +V + +L+D+Y KC E AR VF
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
+ MP +D++SW+SM Y + G +EAL F M +P T+ +L AC L L+
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G F+ RN N + + L++MYA C + QA VF M +D V WN +++
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+N + VFG++ G+ N ++ ++ GC G ++ + + M
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRM 306
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 164/344 (47%), Gaps = 37/344 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M +V+ + A+ + M G P + T +L AC D + G H +V+ G
Sbjct: 150 MASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNG 209
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY-------------- 106
+ + FV ++L+N+Y C + A VFD + ++ VSW +I+ Y
Sbjct: 210 MGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFG 269
Query: 107 ---------------------INEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+ G E+A+ + R+ + G KP+ +I VL ACT L
Sbjct: 270 RMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLE 329
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
L K IHGY+ +++ T+LV +YAKCG++E +RRVF M ++D VSW++MI
Sbjct: 330 SLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMII 389
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
+ +G +EAL +F M ++P T GVLS C+ ++ G+ M R+ +
Sbjct: 390 ATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVE 449
Query: 266 -NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSG 307
+ + ++D+ ++ GR+ +A + ++M + W A++ G
Sbjct: 450 PDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 15/269 (5%)
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
+A + +Y+ G++++AR +FD++P+ D+ +W+ +I +G EA+ + + + +N
Sbjct: 13 LALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKN 72
Query: 228 -LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
++P+ ++ V ACASL + R F S+ +LG LIDMY KC A
Sbjct: 73 CVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGA 132
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
VF M +D + W ++ S G ++ A G F ++ G +PN T +L CT
Sbjct: 133 RLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDL 192
Query: 347 GLVDEGRQFFNSMSR------VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
+ GR+ + R VF + ++ Y + + R QL + SM +
Sbjct: 193 KDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSI--RQAQL-----VFDSMSRR-D 244
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+ W L+ L+K+ + V ++++
Sbjct: 245 TVSWNVLITAYFLNKECEKGLSVFGRMMS 273
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 117/250 (46%), Gaps = 7/250 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G + N + A+E + M+N GF P T VL AC + G + H I +
Sbjct: 286 VIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHW 345
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D T+L+ +Y CG L + +VF + ++ VSW +I GN EEA+ +FR
Sbjct: 346 FFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFR 405
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN-EAGKGRNVFVATSLVDLYAKC 179
++ G++P+S + VL+ C+ + I ++ + + + +VD+ ++
Sbjct: 406 EMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRA 465
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPEYYTM 235
G +E+A +MP E +W +++ G Y + + A + + ++ +N P Y +
Sbjct: 466 GRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDN--PGNYVL 523
Query: 236 VGVLSACASL 245
+ + A L
Sbjct: 524 LSNILVSAKL 533
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/605 (40%), Positives = 369/605 (60%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI V +D F A Y M+ +G +P T V A + G + L+
Sbjct: 177 MIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGV 236
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D V S +N++ + G L DA ++F+D+ D++VV+W +I+ Y+ N EA+ +F
Sbjct: 237 MESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFG 296
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RL G+K + + V +L T L L+ K IH V EAG R+ VAT+L+ LY +C
Sbjct: 297 RLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCE 356
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+A ++F M KD+++W+ M YA NGF KEAL +F MQ E +P T+V VL
Sbjct: 357 APGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLD 416
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CA L AL+ G S + N F V+ T LI+MY KCG+MA+A VF +M +D +V
Sbjct: 417 TCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILV 476
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN+++ + +GY +F Q++ G++ + +FV +L +H+G V +G Q+F +M
Sbjct: 477 WNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAML 536
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP-MEPNAIVWGALLAGCRLHKKTDL 419
+ FS+TP E YGC+VDLLGR+G++ EA +++ + P+ I+W LL CR H KTD
Sbjct: 537 QDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQ 596
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A+ Q++ +P +SG YV+LSN+Y+A+ W+ ++R +M +G++K G S +E+
Sbjct: 597 AKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILN 656
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VHEFL GD SHP IY++LD L ++++AAG++P T +L D+E+E K+ L HSE+
Sbjct: 657 RVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSER 716
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI+T P +R+ KNLRVC DCH A K ISK+ GREI+VRD +RFH F +G CS
Sbjct: 717 LAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCS 776
Query: 600 CKDFW 604
CKD+W
Sbjct: 777 CKDYW 781
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 215/428 (50%), Gaps = 4/428 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + A+ + M+ E +PT T+ +L ACA + G+ H I++ G
Sbjct: 76 MIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQG 135
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV T+L+N+Y CG + A F + ++VVSWTA+I+ + A ++R
Sbjct: 136 FEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYR 195
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+ P+ ++ V A LS K+++G V+ +V V S V+++ G
Sbjct: 196 RMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAG 255
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ ARR+F+ M ++D+V+W+ +I Y N EA+ +F +Q++ +K T V +L+
Sbjct: 256 LLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLN 315
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
SL +L G ++ + + V+ T L+ +Y +C QA K+F +M KD +
Sbjct: 316 VYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVIT 375
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS-M 359
W + + NG+ K A +F +++ G +P T V +L C H + +GRQ + +
Sbjct: 376 WTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHII 435
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
F + ++E ++++ G+ G++ EA + + M + + +VW ++L H D
Sbjct: 436 ENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKMA-KRDILVWNSMLGAYAQHGYYDE 492
Query: 420 AEHVLNQL 427
+ NQ+
Sbjct: 493 TLQLFNQM 500
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 155/313 (49%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P F +L+ C+ + G R H + G + + V L+ +Y CG + +A +V
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F+ + K+V +WT +I Y +G+ + A+ MF ++ + P + V +L AC L
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
IHG + + G +VFV T+L+++Y KCG++ A F ++ +D+VSW++MI
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 181
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+ A ++ MQ + + P T+ V +A L G + + S+
Sbjct: 182 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDV 241
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ + ++M+ G + A ++F +M D+D V WN V++ N A +FG+L++
Sbjct: 242 RVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQD 301
Query: 328 GIQPNGNTFVGLL 340
G++ N TFV +L
Sbjct: 302 GVKANDITFVLML 314
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 144/282 (51%), Gaps = 2/282 (0%)
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
KPD+ V +L C+ ++ + +H +V + G +N V L+ +YA+CG++ +A++
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
VF+ + KD+ +W+ MI Y G AL MFY MQ E++ P T V +L+ACAS +
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
L+ G+ + + F + +GT LI+MY KCG + A F+ ++ +D V W A+++
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
+ +A ++ +++ G+ PN T + + EG+ F + +
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGK-FVYGLVSSGVMES 239
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ V++ G +G L +A L + M ++ + + W ++
Sbjct: 240 DVRVMNSAVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVIT 280
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/507 (46%), Positives = 329/507 (64%), Gaps = 31/507 (6%)
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
PD+F+ VL AC +L D+ K IHG + G G N+F+ +++LY CG M A +
Sbjct: 8 PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLL 67
Query: 189 FDQMPEKDIV-------------------------------SWSSMIQGYASNGFPKEAL 217
F++MP++D V SW+SMI G+ G P EA+
Sbjct: 68 FEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAI 127
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
D+F ++ E ++P T+V VL+ACA LG L+LG + ++ F N + TLIDMY
Sbjct: 128 DLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMY 187
Query: 278 AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
KCG + A +VF EM+++ V W+A+++GL+M+G + A +F ++ K G++PNG TF+
Sbjct: 188 VKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFI 247
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
GLL C+H GL+DEGR+FF SM+ + + P IEHYGC+VDL R+G L+EAHE I SMP+
Sbjct: 248 GLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPI 307
Query: 398 EPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKI 457
+PN +VWGALL GC++HK DLAE + L L+P N G YV++SNIY+ + +W DAA++
Sbjct: 308 KPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARV 367
Query: 458 RSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTT 517
R +M D+G++K G S + V+GVVHEF+ GD +HP +E I D+L K+K G+ P T
Sbjct: 368 RKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAPKT 427
Query: 518 DHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKI 577
VL D+EE+EK+ FL HSEKLA+ FGL+TT IRI KNLRVC DCH A+K+IS I
Sbjct: 428 SVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKIISGI 487
Query: 578 TGREIIVRDNNRFHCFIEGSCSCKDFW 604
REIIVRD NRFHCF +G CSC+DFW
Sbjct: 488 VSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 176/331 (53%), Gaps = 35/331 (10%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
MR LP FT FVLKAC + D G H L K G + F++ +LNLY CG
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 81 LADALKVFDDIP-------------------------------DKNVVSWTAIISGYINE 109
+ DA+ +F+ +P +KNV SWT++ISG++
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
G EAI++F +L ++P+ ++V VL AC LGDL + +H Y ++G RNV V
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
+L+D+Y KCG +E ARRVF +M E+ +VSWS+MI G A +G +EAL +F M + +K
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK 240
Query: 230 PEYYTMVGVLSACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
P T +G+L AC+ +G ++ G +AS + G ++D++++ G + +A
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYG-CVVDLFSRAGLLEEAH 299
Query: 288 KVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
+ M K + VVW A++ G ++ + +A
Sbjct: 300 EFILSMPIKPNGVVWGALLGGCKVHKNIDLA 330
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 2/208 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GFV AI+ + + +E P T VL ACA D LG H K+G
Sbjct: 113 MISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSG 172
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V +L+++YV CG L +A +VF ++ ++ VVSW+A+I+G G EEA+ +F
Sbjct: 173 FKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFS 232
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G+KP+ + + +L AC+ +G + ++ + G + +VDL+++
Sbjct: 233 EMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRA 292
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMIQG 206
G +E+A MP K + V W +++ G
Sbjct: 293 GLLEEAHEFILSMPIKPNGVVWGALLGG 320
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/592 (40%), Positives = 358/592 (60%), Gaps = 1/592 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A E Y MR++G T+ +L AC+ + G HS I + G D + +L++
Sbjct: 314 AFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALIS 373
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG L A ++F +P ++++SW AII+GY + EA+ +++++ G+KP +
Sbjct: 374 MYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVT 433
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+ +L+AC + K IH + +G N +A +L+++Y +CG++ +A+ VF+
Sbjct: 434 FLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQ 493
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
+D++SW+SMI G+A +G + A +F MQ E L+P+ T VLS C + ALELG
Sbjct: 494 ARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQ 553
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ + + LG LI+MY +CG + A VF ++ +D + W A++ G + G
Sbjct: 554 IHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGE 613
Query: 314 VKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
A +F Q++ G +P +G+TF +L C HAGLV EG Q F+SM + + P IEHY
Sbjct: 614 DMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHY 673
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEP 432
GC+V LLGR+ + EA LI MP P+A VW LL CR+H LAEH N + L
Sbjct: 674 GCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNA 733
Query: 433 WNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHP 492
N Y+LLSN+Y+A+ +W+D AKIR +M +GI+K G SW+EVD ++HEF+ D SHP
Sbjct: 734 RNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHP 793
Query: 493 LSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPK 552
+ +IY++L L+ +++ AG+ P T HVL D+ + ++ L HSE+LA+A+GLI T P
Sbjct: 794 ETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPG 853
Query: 553 DVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI KNLR+CGDCH A K ISK+ GREII RD+NRFH F G CSC+D+W
Sbjct: 854 TPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 209/395 (52%), Gaps = 2/395 (0%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
+ M +EG P T+ +L A G R H L V+ GL+ D V T+L+ + V
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVR 136
CG + A + F I D++VV + A+I+ G+ EA + R+ G+ + + +
Sbjct: 276 RCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLS 335
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
+L AC+ L K IH +++E G +V + +L+ +YA+CG++ KAR +F MP++D
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASS 256
++SW+++I GYA EA+ ++ MQ E +KP T + +LSACA+ A G
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
+ R+ SN L L++MY +CG + +A VF + +D + WN++++G + +G +
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A+ +F +++ ++P+ TF +L GC + ++ G+Q ++ L + ++
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNALI 574
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
++ R G L +A + S+ + + W A++ GC
Sbjct: 575 NMYIRCGSLQDARNVFHSL-QHRDVMSWTAMIGGC 608
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 219/425 (51%), Gaps = 4/425 (0%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ A + + M+N GF+P T+ +L AC + + G + HS I+KAG D V+ SL
Sbjct: 110 KKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSL 169
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
L++Y CG L A +VF I ++VVS+ ++ Y + ++E + +F ++ G+ PD
Sbjct: 170 LSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDK 229
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+ + +L A T L K IH E G ++ V T+LV + +CG+++ A++ F
Sbjct: 230 VTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKG 289
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+ ++D+V ++++I A +G EA + +Y M+ + + T + +L+AC++ ALE G
Sbjct: 290 IADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAG 349
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
S + + S+ +G LI MYA+CG + +A ++F M +D + WNA+++G +
Sbjct: 350 KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARR 409
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
A ++ Q++ G++P TF+ LL C ++ +G+ + R +
Sbjct: 410 EDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHL 468
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--A 429
++++ R G L EA + + + I W +++AG H + A + ++
Sbjct: 469 ANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQNEE 527
Query: 430 LEPWN 434
LEP N
Sbjct: 528 LEPDN 532
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 208/379 (54%), Gaps = 2/379 (0%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ +L+ C R+ R H+ +V+AG+ D F+ L+N+YV C + DA +VF ++
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
P ++V+SW ++IS Y +G ++A +F + + G P+ + + +LTAC +L K
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
IH + +AG R+ V SL+ +Y KCG++ +AR+VF + +D+VS+++M+ YA
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
+ KE L +F M E + P+ T + +L A + L+ G S+ +GT
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
L+ M +CG + A + F+ + D+D VV+NA+++ L+ +G+ AF + ++ G+
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
N T++ +L C+ + ++ G+ + +S + ++ ++ + R G L +A EL
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISED-GHSSDVQIGNALISMYARCGDLPKAREL 387
Query: 392 IKSMPMEPNAIVWGALLAG 410
+MP + + I W A++AG
Sbjct: 388 FYTMP-KRDLISWNAIIAG 405
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 170/321 (52%), Gaps = 5/321 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + A+ Y M++EG P TF +L ACA + G H I+++G
Sbjct: 402 IIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSG 461
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + + +L+N+Y CG L +A VF+ ++V+SW ++I+G+ G+ E A +F+
Sbjct: 462 IKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQ 521
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + L+PD+ + VL+ C L K IHG + E+G +V + +L+++Y +CG
Sbjct: 522 EMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCG 581
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK-PEYYTMVGVL 239
+++ AR VF + +D++SW++MI G A G +A+++F+ MQ E + P+ T +L
Sbjct: 582 SLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSIL 641
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DK 296
SAC G + G S ME +E+ P + L+ + + R +A + +M
Sbjct: 642 SACNHAGLVLEGYQIFSSME-SEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPP 700
Query: 297 DQVVWNAVVSGLSMNGYVKVA 317
D VW ++ ++G + +A
Sbjct: 701 DAAVWETLLGACRIHGNIALA 721
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 156/290 (53%), Gaps = 2/290 (0%)
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
R + D + V +L CT+ L AK IH + EAG G ++F++ L+++Y KC ++
Sbjct: 21 RPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLD 80
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
A +VF +MP +D++SW+S+I YA GF K+A +F MQ P T + +L+AC S
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
LE G S + + + +P + +L+ MY KCG + +A +VF + +D V +N +
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTM 200
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
+ + YVK G+FGQ+ GI P+ T++ LL T ++DEG++ + ++
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR-IHKLTVEEG 259
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
L I +V + R G +D A + K + + + +V+ AL+A H
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALIAALAQH 308
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/605 (41%), Positives = 357/605 (59%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF N F+ +I + M + G + T VL A A +++LG+ L K G
Sbjct: 185 MISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKG 244
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D +V T L++LY CG +FD I +++S+ A+ISGY E A+ +FR
Sbjct: 245 LHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFR 304
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
LL G + +S ++V ++ L ++ I + G V+T+L +Y +
Sbjct: 305 ELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLN 364
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR++FD+ PEK + SW++MI GY NG A+ +F M + L P T+ +LS
Sbjct: 365 EVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILS 423
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LGAL +G W ++ SN + T L+DMYAKCG + +A ++F M DK+ V
Sbjct: 424 ACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT 483
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+++G ++G+ K A +F ++ + GI P G TF+ +L C+H+GLV EG + F+SM+
Sbjct: 484 WNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMA 543
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ PM EHY CMVD+LGR+GQL A E I+ MP+EP VWGALL C +HK T++A
Sbjct: 544 NNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA 603
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+L L+P N G YVLLSNIYS + AA +R ++ + + K GC+ +E+D
Sbjct: 604 NVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQ 663
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF-VPTTDHVLFDIEEEEKQYFLACHSEK 539
+ F GD SHP + I+ L++L K++ AG+ T L D+E+EEK+ + HSEK
Sbjct: 664 QYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEK 723
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI+T P IRI KNLRVC DCH A K ISKIT R I+VRD NRFH F G CS
Sbjct: 724 LAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICS 783
Query: 600 CKDFW 604
C D+W
Sbjct: 784 CGDYW 788
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 221/450 (49%), Gaps = 5/450 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRGF N + +I Y +R L P NFT+ F + A +R D ++GV H+ +
Sbjct: 83 LIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD 142
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G+ + FV +++++LY A KVFD +P+++ V W +ISG+ E++I +F
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L GL DS ++ VLTA +L + I ++ G +V+V T L+ LY+KC
Sbjct: 203 VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC 262
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G K R +FDQ+ + D++S+++MI GY N + A+ +F + + T+VG++
Sbjct: 263 GKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
L+L + + + P + T L +Y + + A ++F E +K
Sbjct: 323 PVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLA 382
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG + NG A +F ++ + PN T +L C G + G+ + + +
Sbjct: 383 SWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGK-WVHGL 440
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ L + +VD+ + G + EA +L M ++ N + W A++ G LH
Sbjct: 441 IKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGYGLHGHGKE 499
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
A + +++ +G LS +Y+ SH
Sbjct: 500 ALKLFYEMLQSGIPPTG-VTFLSILYACSH 528
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENL 228
T L + G + R++F+++ + D+ ++ +I+G++ NG PK ++ ++ ++++ NL
Sbjct: 50 TKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNL 109
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+P+ +T +SA + L +GV + + SN +G+ ++D+Y K R A K
Sbjct: 110 RPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARK 169
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG- 347
VF M ++D V+WN ++SG S N Y + + VF + G+ + T +L
Sbjct: 170 VFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQE 229
Query: 348 -LVDEGRQFFNSM----SRVFSLTPMIEHYG-CMVDLLGRS--GQLDEAHELIKSMPMEP 399
+ G Q S S V+ LT +I Y C GR Q+D +P
Sbjct: 230 YRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQID-----------QP 278
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQLIAL-EPWNSGNYVLLSNIY 445
+ I + A+++G + +T+ A + +L+A + NS V L +Y
Sbjct: 279 DLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVY 325
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/605 (41%), Positives = 357/605 (59%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF N F+ +I + M + G + T VL A A +++LG+ L K G
Sbjct: 185 MISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKG 244
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D +V T L++LY CG +FD I +++S+ A+ISGY E A+ +FR
Sbjct: 245 LHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFR 304
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
LL G + +S ++V ++ L ++ I + G V+T+L +Y +
Sbjct: 305 ELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLN 364
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR++FD+ PEK + SW++MI GY NG A+ +F M + L P T+ +LS
Sbjct: 365 EVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILS 423
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LGAL +G W ++ SN + T L+DMYAKCG + +A ++F M DK+ V
Sbjct: 424 ACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT 483
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+++G ++G+ K A +F ++ + GI P G TF+ +L C+H+GLV EG + F+SM+
Sbjct: 484 WNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMA 543
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ PM EHY CMVD+LGR+GQL A E I+ MP+EP VWGALL C +HK T++A
Sbjct: 544 NNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA 603
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+L L+P N G YVLLSNIYS + AA +R ++ + + K GC+ +E+D
Sbjct: 604 NVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQ 663
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF-VPTTDHVLFDIEEEEKQYFLACHSEK 539
+ F GD SHP + I+ L++L K++ AG+ T L D+E+EEK+ + HSEK
Sbjct: 664 QYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEK 723
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI+T P IRI KNLRVC DCH A K ISKIT R I+VRD NRFH F G CS
Sbjct: 724 LAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICS 783
Query: 600 CKDFW 604
C D+W
Sbjct: 784 CGDYW 788
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 222/450 (49%), Gaps = 5/450 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRGF N + +I Y +R + L P NFT+ F + A +R D ++GV H+ +
Sbjct: 83 LIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD 142
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G+ + FV +++++LY A KVFD +P+++ V W +ISG+ E++I +F
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L GL DS ++ VLTA +L + I ++ G +V+V T L+ LY+KC
Sbjct: 203 VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC 262
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G K R +FDQ+ + D++S+++MI GY N + A+ +F + + T+VG++
Sbjct: 263 GKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
L+L + + + P + T L +Y + + A ++F E +K
Sbjct: 323 PVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLA 382
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG + NG A +F ++ + PN T +L C G + G+ + + +
Sbjct: 383 SWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGK-WVHGL 440
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ L + +VD+ + G + EA +L M ++ N + W A++ G LH
Sbjct: 441 IKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGYGLHGHGKE 499
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
A + +++ +G LS +Y+ SH
Sbjct: 500 ALKLFYEMLQSGIPPTG-VTFLSILYACSH 528
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 140/287 (48%), Gaps = 22/287 (7%)
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NL 228
T L + G + R++F+++ + D+ ++ +I+G++ NG PK ++ ++ +++++ NL
Sbjct: 50 TKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNL 109
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+P+ +T +SA + L +GV + + SN +G+ ++D+Y K R A K
Sbjct: 110 RPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARK 169
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG- 347
VF M ++D V+WN ++SG S N Y + + VF + G+ + T +L
Sbjct: 170 VFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQE 229
Query: 348 -LVDEGRQFFNSM----SRVFSLTPMIEHYG-CMVDLLGRS--GQLDEAHELIKSMPMEP 399
+ G Q S S V+ LT +I Y C GR Q+D +P
Sbjct: 230 YRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQID-----------QP 278
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQLIAL-EPWNSGNYVLLSNIY 445
+ I + A+++G + +T+ A + +L+A + NS V L +Y
Sbjct: 279 DLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVY 325
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/570 (42%), Positives = 361/570 (63%), Gaps = 1/570 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L++C + G + H ++ +GL D + T L++LY CG + A ++FD +P +N
Sbjct: 68 ILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRN 127
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
V W +I Y EG E A+ ++R ++ G++PD+F+ VL AC L DL T + +H
Sbjct: 128 VFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQ 187
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
V+ G++VFV +VD+YAKCG ++ AR VFD + +D V W+SMI Y NG P E
Sbjct: 188 RVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPME 247
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL + +M + P T+V +SA A AL G F R F L T+L+D
Sbjct: 248 ALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVD 307
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE-KCGIQPNGN 334
MYAK G + A +F ++ ++ V WNA++ G M+G+ A +F +++ + P+
Sbjct: 308 MYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNI 367
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
TFVG+L C H G+V+E ++FF M +S+ P ++HY C++D+LG +G+ +EA++LIK
Sbjct: 368 TFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKG 427
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDA 454
M +EP++ +WGALL GC++HK +L E L +LI LEP ++GNYV LSNIY+ S KW A
Sbjct: 428 MSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKA 487
Query: 455 AKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFV 514
A++R +M ++G++KI CSW+E+ G H FLVGD SHP S++IY +L+ L + AG+V
Sbjct: 488 ARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYV 547
Query: 515 PTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLI 574
P V +++++EK+ + HSE+LA+AFGLI+T P + + KNLRVC DCH IKLI
Sbjct: 548 PDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLI 607
Query: 575 SKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
S+I REII+RD NR+H F+ G CSCKD+W
Sbjct: 608 SQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 167/323 (51%), Gaps = 9/323 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + + A+ Y M G P NFT+P VLKACA D + G H +
Sbjct: 134 LIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTR 193
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV ++++Y CG + DA VFD I ++ V W ++I+ Y G EA+ + R
Sbjct: 194 WGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCR 253
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ P ++V ++A L + +HG+ G G + TSLVD+YAK G
Sbjct: 254 DMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSG 313
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVL 239
++ AR +F+Q+ ++++VSW++MI GY +G EAL +F M+ + + P+ T VGVL
Sbjct: 314 WVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVL 373
Query: 240 SACASLGALELGVWASSF--MERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK- 294
SAC G +E A F + N + P + T +ID+ GR +A + + M
Sbjct: 374 SACNHGGMVEE---AKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSI 430
Query: 295 DKDQVVWNAVVSGLSMNGYVKVA 317
+ D +W A+++G ++ V++
Sbjct: 431 EPDSGIWGALLNGCKIHKNVELG 453
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/558 (43%), Positives = 347/558 (62%), Gaps = 35/558 (6%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G L A VF+ IP+ + +II GY N+ +AI ++ ++ +GL PD F+ +
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
+C G L K +H + + G + ++ +L+++Y+ CG + AR+VFD+M K +V
Sbjct: 86 KSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 142
Query: 199 SWSSMIQGYASNGFP--------------------------------KEALDMFYNMQRE 226
SW++MI YA P +EAL +F MQ
Sbjct: 143 SWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 202
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+K + TM +L AC LGALELG W ++E+ + + LGT L+DMYAKCG + A
Sbjct: 203 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 262
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
+VF+EM +KD + W A++ GL+M G A +F +++ ++P+ TFVG+L C+HA
Sbjct: 263 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHA 322
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
GLV+EG +FNSM + + P IEHYGCMVD+LGR+G++ EA +LI++MPM P+ V
Sbjct: 323 GLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVG 382
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
LL+ CR+H +AE QLI L+P N G YVLLSNIYS+ W A K+R +M ++ I
Sbjct: 383 LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 442
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
+K GCS +EV GVVHEF+ GD SHP S +IY LD++ +LK+AG+VP VLFD++E
Sbjct: 443 KKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDE 502
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
+EK+ L+ HSEKLA+AFGL++T P IR+ KNLRVC DCH A+K IS++ REIIVRD
Sbjct: 503 KEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRD 562
Query: 587 NNRFHCFIEGSCSCKDFW 604
NRFH F +GSCSC+DFW
Sbjct: 563 RNRFHHFTKGSCSCRDFW 580
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 201/375 (53%), Gaps = 42/375 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ + + + AI FY M +G P FTFP + K+C + G + H K G
Sbjct: 49 IIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLG 105
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTA------------------- 101
D +++ +L+N+Y +CG L A KVFD + +K+VVSW
Sbjct: 106 FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFR 165
Query: 102 -------------IISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+I+G++ + + EEA+++F + G+K D ++ +L ACT LG L
Sbjct: 166 RMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALE 225
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
KW+H Y+ + +V + T+LVD+YAKCG++E A RVF +MPEKD+++W+++I G A
Sbjct: 226 LGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLA 285
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
G +AL++F+ MQ +KP+ T VGVL+AC+ G + G+ + M N++ P
Sbjct: 286 MCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMP-NKYGIQPS 344
Query: 269 LG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ ++DM + GR+A+A + + M D V ++S ++G + VA QL
Sbjct: 345 IEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLI 404
Query: 326 KCGIQP-NGNTFVGL 339
+ + P NG T+V L
Sbjct: 405 E--LDPKNGGTYVLL 417
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/606 (42%), Positives = 364/606 (60%), Gaps = 43/606 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI+ + N+ AI Y M P +T+P VLKAC+ GV+ H+ +VK G
Sbjct: 109 MIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHG 168
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMF 119
L D + +S + +Y G L +A ++ DD + + V W A+I GY+ G +E A +F
Sbjct: 169 LGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELF 228
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ PD I + W +++ +++C
Sbjct: 229 EGM------PDRSMI---------------STW-----------------NAMISGFSRC 250
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E AR FD+M E+D +SWS+MI GY G EAL++F+ MQ+E ++P + + VL
Sbjct: 251 GMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVL 310
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACA+LGAL+ G W ++ +RN + VLGT+L+DMYAKCGR+ A +VF +M +K+
Sbjct: 311 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 370
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ GL+M+G + A +F +++ I PN TFVG+L C H GLV +G FNSM
Sbjct: 371 SWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLVQKGLTIFNSM 427
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + + P IEHYGC+VDLLGR+G L EA +++ S+P EP VWGALL CR H +L
Sbjct: 428 RKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVEL 487
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD- 478
E V L+ LEP NSG Y LLSNIY+ + +W + ++R +M ++GI+ G S +++
Sbjct: 488 GERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGR 547
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
G VH+F++GD SHP + IY LD++ +L+ G+ P VLFDI+EEEK+ + HSE
Sbjct: 548 GEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSE 607
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA+ FGLI T+P IRI KNLRVC DCH A KLIS++ REIIVRD R+H F G+C
Sbjct: 608 KLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGAC 667
Query: 599 SCKDFW 604
SCKDFW
Sbjct: 668 SCKDFW 673
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/605 (40%), Positives = 364/605 (60%), Gaps = 22/605 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+VSN + + Y M G T VL CA LG HSL +K+
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +LL++Y CG L AL+VF+ + ++NVVSWT++I+GY +G + AI + +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQ 341
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+K D +I +L AC + G L K +H Y+ N+FV +L+D+YAKCG
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCG 401
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ME A VF M KDI+SW++MI LKP+ TM VL
Sbjct: 402 SMEAANSVFSTMVVKDIISWNTMIG---------------------ELKPDSRTMACVLP 440
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL ALE G ++ RN + S+ + L+D+Y KCG + A +F + KD V
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 500
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G M+GY A F ++ GI+P+ +F+ +L C+H+GL+++G +FF M
Sbjct: 501 WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
F++ P +EHY CMVDLL R+G L +A+E ++++P+ P+A +WGALL GCR + +LA
Sbjct: 561 NDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELA 620
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V ++ LEP N+G YVLL+NIY+ + KW + ++R +G +G++K GCSW+E+ G
Sbjct: 621 EKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGK 680
Query: 481 VHEFLVGDN-SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V+ F+ G+N SHP S+ I S L ++ K+K G P T + L + +E +K+ L HSEK
Sbjct: 681 VNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEK 740
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL+T P+ IR+ KNLRVCGDCHE K +SK T REI++RD+NRFH F +G CS
Sbjct: 741 LAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCS 800
Query: 600 CKDFW 604
C+ FW
Sbjct: 801 CRGFW 805
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 214/472 (45%), Gaps = 81/472 (17%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD-------- 83
T+ VL+ CA F G + HS+I + D + L++ Y CG L +
Sbjct: 101 TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 84 -------------------------------------------ALKVFDDIPDKNVVSWT 100
A ++FD + D++V+SW
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220
Query: 101 AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
++ISGY++ G E + +++++++ G+ D +I+ VL C G LS K +H ++
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
R + + +L+D+Y+KCG+++ A RVF++M E+++VSW+SMI GY +G A+ +
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLL 340
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
M++E +K + + +L ACA G+L+ G +++ N SN + L+DMYAKC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKC 400
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G M A VF M KD + WN ++ L +P+ T +L
Sbjct: 401 GSMEAANSVFSTMVVKDIISWNTMIGEL---------------------KPDSRTMACVL 439
Query: 341 CGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP 399
C ++ G++ + R +S + + +VDL + G L A L +P
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVAN--ALVDLYVKCGVLGLARLLFDMIP-SK 496
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSASH 449
+ + W ++AG +H + A N++ +EP +S +Y+ SH
Sbjct: 497 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP---DEVSFISILYACSH 545
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 163/376 (43%), Gaps = 55/376 (14%)
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
D V + A I + G+LE A+ + L+ ++ VL C L + K
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETKTYG--SVLQLCAGLKSFTDGKK 120
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM-------------------- 192
+H + G + + LV YA CG++++ RRVFD M
Sbjct: 121 VHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 193 --------------------PE-----------KDIVSWSSMIQGYASNGFPKEALDMFY 221
PE +D++SW+SMI GY SNG + L ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
M + + T++ VL CA+ G L LG S ++ F TL+DMY+KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
+ A +VF +M +++ V W ++++G + +G A + Q+EK G++ + +L
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C +G +D G+ + + + ++ + ++D+ + G ++ A+ + +M ++ +
Sbjct: 361 ACARSGSLDNGKDVHDYI-KANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK-DI 418
Query: 402 IVWGALLAGCRLHKKT 417
I W ++ + +T
Sbjct: 419 ISWNTMIGELKPDSRT 434
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/604 (42%), Positives = 369/604 (61%), Gaps = 38/604 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + N F AI+ Y+SM + G P +T+PFVLKAC+ + GV HS G
Sbjct: 80 IIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFG 139
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV T+L++ Y CG L +A ++F + ++VV+W A+I+G G ++A+ +
Sbjct: 140 LESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIM 199
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ P+S +IV VL C L LYA
Sbjct: 200 QMQEEGICPNSSTIVGVLPTCQCL------------------------------LYA--- 226
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
R++FD M ++ VSWS+MI GY ++ KEALD+F MQ + P+ TM+GVL
Sbjct: 227 -----RKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLP 281
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+ L AL+ G + ++ F ++ ++ LIDMY+KCG+++ A +VF M D V
Sbjct: 282 ACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVS 341
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G ++G A G+F L G++P+ TF+ LL C+H+GLV EGR +F++MS
Sbjct: 342 WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMS 401
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R FS+ P +EH CMVD+LGR+G +DEAH I++MP EP+ +W ALL+ CR+HK +L
Sbjct: 402 RDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELG 461
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V ++ +L P ++GN+VLLSNIYSA+ +W+DAA IR D G++KI GCSW+E++G+
Sbjct: 462 EEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGI 521
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F+ GD SH +I KL+EL ++K G+ V D+EEEEK+ L HSEKL
Sbjct: 522 VHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKL 581
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFG++ I + KNLRVCGDCH AIK ++ IT REI VRD NRFH F G+C+C
Sbjct: 582 AIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNC 641
Query: 601 KDFW 604
DFW
Sbjct: 642 GDFW 645
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 116/209 (55%)
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
+ +L AC Q L+ AK IH + + + V L LY C + ARR+FD++P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
++ W+ +I+ YA NG A+D++++M ++P YT VL AC+ L A+E GV
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
S + S+ + T L+D YAKCG + +A ++F M +D V WNA+++G S+ G
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
A + Q+++ GI PN +T VG+L C
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTC 220
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/604 (40%), Positives = 370/604 (61%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + N ++ +++ +N MR G+ P NFT LK+C F +G H +K
Sbjct: 208 MVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGC 267
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FV +LL LY G + DA ++F+++P +++ W+ +I+ Y +EA+++F
Sbjct: 268 YDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFL 327
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ + P++F+ VL AC L K IH V + G NVFV+ +++D+YAKCG
Sbjct: 328 RMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCG 387
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E + ++F+++P+++ V+W+++I GY G + A+++F +M +++P T VL
Sbjct: 388 EIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLR 447
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A ASL ALE G+ S + + + V+ +LIDMYAKCGR+ A F +M +D+V
Sbjct: 448 ASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVS 507
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G SM+G A +F ++ +PN TFVG+L C++AGL+ +G+ F SMS
Sbjct: 508 WNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMS 567
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + P IEHY CMV LLGR G+ DEA +LI + +P+ +VW ALL C +HKK DL
Sbjct: 568 KDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLG 627
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
++ +EP + +VLLSN+Y+ + +W++ A +R M K ++K G SWVE GV
Sbjct: 628 RVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGV 687
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F VGD SHP + I + L+ L K + AG+VP + VL D++++EK+ L HSE+L
Sbjct: 688 VHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERL 747
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
ALA+GLI T IRI KNLR+C DCH +KLISK+ REI++RD NRFH F G CSC
Sbjct: 748 ALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSC 807
Query: 601 KDFW 604
D+W
Sbjct: 808 GDYW 811
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 216/415 (52%), Gaps = 4/415 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+ +G+ + F A+ F + EG F F +LK L H+ + K G
Sbjct: 107 LAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLG 166
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV T+L++ Y G + A VFDDI K++VSWT +++ Y EE++ +F
Sbjct: 167 HHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFN 226
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G KP++F+I L +C L + K +HG + ++FV +L++LYAK G
Sbjct: 227 QMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSG 286
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A+R+F++MP+ D++ WS MI YA + KEALD+F M++ ++ P +T VL
Sbjct: 287 EIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQ 346
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACAS +L+LG S + + SN + ++D+YAKCG + + K+F E+ D++ V
Sbjct: 347 ACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVT 406
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SM 359
WN ++ G G + A +F + + +QP T+ +L ++ G Q + ++
Sbjct: 407 WNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTI 466
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+++ ++ ++D+ + G++++A M + + + W A++ G +H
Sbjct: 467 KTMYNKDTVVA--NSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMH 518
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 186/363 (51%), Gaps = 4/363 (1%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G H I+K G D F + LLN YV L DA K+FD++P N +S+ + GY
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW-IHGYVNEAGKGRNVF 167
+ +A++ R+ G + + F +L + DL+ W +H V + G + F
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSM-DLAHLCWTLHACVYKLGHHADAF 172
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
V T+L+D Y+ GN++ AR VFD + KD+VSW+ M+ YA N F +E+L +F M+
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
KP +T+ G L +C L A +G + + + +G L+++YAK G + A
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
++F EM D + W+ +++ + + K A +F ++ + + PN TF +L C +
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+D G+Q + + + F L + ++D+ + G+++ + +L + +P + N + W +
Sbjct: 353 SLDLGKQIHSCVLK-FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP-DRNDVTWNTI 410
Query: 408 LAG 410
+ G
Sbjct: 411 IVG 413
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 135/287 (47%), Gaps = 15/287 (5%)
Query: 130 DSFSIVRVLTACTQLG-DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
DS S +L + G D K +H ++ + G ++F L++ Y + +++ A ++
Sbjct: 33 DSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKL 92
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD+MP+ + +S+ ++ QGY+ + +AL + +E + + +L S+
Sbjct: 93 FDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLA 152
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
L + + + ++ +GT LID Y+ G + A VF ++ KD V W +V+
Sbjct: 153 HLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACY 212
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF--SLT 366
+ N + + + +F Q+ G +PN T G L C G + FN V +L
Sbjct: 213 AENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCL-------GLEAFNVGKSVHGCALK 265
Query: 367 PMIEH---YG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+H G +++L +SG++ +A L + MP + + I W ++A
Sbjct: 266 GCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMP-KTDLIPWSLMIA 311
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/577 (42%), Positives = 367/577 (63%), Gaps = 1/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + TF L ACAR D + G AG D FV +SLL+LY G + DA+KV
Sbjct: 106 PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F +P ++ V+W+ +++G+++ G +AI M+RR+ G+K D ++ V+ ACT ++
Sbjct: 166 FVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNV 225
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+HG++ G +V ATSLVD+YAK G ++ A RVF M ++ VSWS+MI G+
Sbjct: 226 RMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A NG EAL +F NMQ ++P+ +V L AC+++G L+LG F+ R F N
Sbjct: 286 AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNC 344
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+LGT IDMY+KCG +A A +F + D+D ++WNA+++ +G + A +F ++ +
Sbjct: 345 ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNET 404
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++P+ TF LL +H+GLV+EG+ +F M F +TP +HY C+VDLL RSG ++E
Sbjct: 405 GMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEE 464
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A +L+ SM EP +W ALL+GC +KK +L E + + ++ L+P + G L+SN+Y+A
Sbjct: 465 ASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAA 524
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ KW+ ++R +M D G +K+ GCS +E+ G H F++ D SHP E+I SK+ +L +
Sbjct: 525 TKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLE 584
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
++ G++P T+ V D+EEE K+ L+ HSE+LA+AFGL+ T P + I KNLRVCGDC
Sbjct: 585 MRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDC 644
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H+AIK ISKI REI+VRD RFH F +G CSC+D+W
Sbjct: 645 HDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 167/309 (54%), Gaps = 4/309 (1%)
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
G+ A+ +FR L +PDS + L+AC +LGDL + + +AG +VF
Sbjct: 86 RRGSPASALRVFR-ALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVF 144
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
V +SL+ LYA+ G M A +VF +MP +D V+WS+M+ G+ S G P +A+ M+ M+ +
Sbjct: 145 VCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG 204
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+K + M+GV+ AC + + +G + R+ + V T+L+DMYAK G + AC
Sbjct: 205 VKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVAC 264
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+VF M ++ V W+A++SG + NG A +F ++ GIQP+ V L C++ G
Sbjct: 265 RVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIG 324
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+ GR + R F ++ +D+ + G L A +++ +M + + I+W A+
Sbjct: 325 FLKLGRSVHGFIVRRFDFNCILG--TAAIDMYSKCGSLASA-QMLFNMISDRDLILWNAM 381
Query: 408 LAGCRLHKK 416
+A C H +
Sbjct: 382 IACCGAHGR 390
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 170/311 (54%), Gaps = 7/311 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GFVS AI+ Y MR +G V++AC + ++G H +++ G
Sbjct: 180 MVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHG 239
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D TSL+++Y G L A +VF + +N VSW+A+ISG+ G +EA+ +FR
Sbjct: 240 MRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFR 299
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++PDS ++V L AC+ +G L + +HG++ N + T+ +D+Y+KCG
Sbjct: 300 NMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDF-NCILGTAAIDMYSKCG 358
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+ +F+ + ++D++ W++MI ++G ++AL +F M ++P++ T +LS
Sbjct: 359 SLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLS 418
Query: 241 ACASLGALELG-VWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDKD 297
A + G +E G +W + N F P L+D+ A+ G + +A + MK +
Sbjct: 419 ALSHSGLVEEGKLWFGRMV--NHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEP 476
Query: 298 QV-VWNAVVSG 307
V +W A++SG
Sbjct: 477 TVAIWVALLSG 487
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 250/620 (40%), Positives = 367/620 (59%), Gaps = 55/620 (8%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDK 94
+KAC + + + H+ +VK G D + T +L L + + AL VFD +P++
Sbjct: 22 IKACKSMRELK---QVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPER 78
Query: 95 NVVSWTAIISGYINEGNLE-EAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKW 152
N +W +I + +A+ +F ++L ++P+ F+ VL AC + L+ K
Sbjct: 79 NCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQ 138
Query: 153 IHG--------------------YV---------------------------NEAGKGRN 165
+HG YV +E G+ N
Sbjct: 139 VHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFN 198
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-Q 224
V + +VD YA+ GN++ AR +FD+M ++ +VSW+ MI GYA NGF KEA+++F+ M Q
Sbjct: 199 VVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQ 258
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
++ P T+V VL A + LG LELG W + E+N+ + VLG+ L+DMYAKCG +
Sbjct: 259 MGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIE 318
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
+A +VF + + + WNAV+ GL+M+G F ++EKCGI P+ T++ +L C+
Sbjct: 319 KAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACS 378
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
HAGLVDEGR FFN M L P IEHYGCMVDLLGR+G L+EA ELI +MPM+P+ ++W
Sbjct: 379 HAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIW 438
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
ALL ++HK + L+ + P +SG YV LSN+Y++S W+ A +R MM D
Sbjct: 439 KALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDM 498
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
I+K GCSW+E+DGV+HEFLV D+SH ++ I+S L+E++ KL G +P T VL +
Sbjct: 499 DIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQVLLKM 558
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
+E+ K+ L HSEK+A+AFGLI+T PK + I KNLR+C DCH ++KLISK+ R+I++
Sbjct: 559 DEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKLISKMYERKIVI 618
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD RFH F GSCSC D+W
Sbjct: 619 RDRKRFHHFEHGSCSCMDYW 638
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 174/346 (50%), Gaps = 60/346 (17%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD---- 83
P FTFP VLKACA G + H L++K GL DEFV T+LL +YV CG + D
Sbjct: 115 PNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVL 174
Query: 84 -------------------------------------------ALKVFDDIPDKNVVSWT 100
A ++FD + ++VVSW
Sbjct: 175 FYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWN 234
Query: 101 AIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE 159
+ISGY G +EAI +F R++ G + P+ ++V VL A ++LG L KW+H Y +
Sbjct: 235 VMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEK 294
Query: 160 AGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDM 219
+ + ++LVD+YAKCG++EKA +VF+++P+ ++++W+++I G A +G + +
Sbjct: 295 NKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNY 354
Query: 220 FYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT------L 273
M++ + P T + +LSAC+ G ++ G SF N+ +++ L +
Sbjct: 355 LSRMEKCGISPSDVTYIAILSACSHAGLVDEG---RSFF--NDMVNSVGLKPKIEHYGCM 409
Query: 274 IDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVAF 318
+D+ + G + +A ++ M K D V+W A++ M+ +K+
Sbjct: 410 VDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGM 455
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 3/207 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+ N ++ AIE ++ M G LP T VL A +R +LG H K
Sbjct: 236 MISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKN 295
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ D+ + ++L+++Y CG + A++VF+ +P NV++W A+I G G + N
Sbjct: 296 KIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYL 355
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAK 178
R+ G+ P + + +L+AC+ G + + + + VN G + +VDL +
Sbjct: 356 SRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGR 415
Query: 179 CGNMEKARRVFDQMPEK-DIVSWSSMI 204
G +E+A + MP K D V W +++
Sbjct: 416 AGYLEEAEELILNMPMKPDDVIWKALL 442
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 241/611 (39%), Positives = 380/611 (62%), Gaps = 7/611 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKAC--AREHDFQLGVRSHSLIVK 58
M++G+V + A + ++ G P F+ +L C A D +LG + H + VK
Sbjct: 255 MLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVK 314
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+GLD D V SL+N+Y G A +VF+D+ +++SW ++IS EE++N+
Sbjct: 315 SGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNL 374
Query: 119 FRRLLHRGLKPDSFSIVRVL-----TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLV 173
F LLH GLKPD F++ + AC L L K IH + +AG ++ V + ++
Sbjct: 375 FIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGIL 434
Query: 174 DLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
D+Y KCG+M A VF+ + D V+W+SMI G NG +AL +++ M++ + P+ Y
Sbjct: 435 DMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEY 494
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T ++ A + + ALE G + + + + +S+P +GT+L+DMYAKCG + A ++F++M
Sbjct: 495 TFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM 554
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
++ +WNA++ GL+ +G + A +F ++ GI+P+ +F+G+L C+HAGL E
Sbjct: 555 NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAY 614
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
++ +SM + + P IEHY C+VD LGR+G + EA ++I++MP + +A + ALL CR+
Sbjct: 615 EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRI 674
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
+ + V +L ALEP++S YVLLSNIY+A+++W+D R MM K ++K G S
Sbjct: 675 QGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFS 734
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
W++V ++H F+V D SHP ++ IY K++E+ ++ G+VP T+ VL D+E+EEK+ L
Sbjct: 735 WIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSL 794
Query: 534 ACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF 593
HSEKLA+A+GLI+T IR+ KNLRVCGDCH AIK ISK+ REI++RD NRFH F
Sbjct: 795 YYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHF 854
Query: 594 IEGSCSCKDFW 604
+G CSC D+W
Sbjct: 855 RDGVCSCGDYW 865
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 229/466 (49%), Gaps = 13/466 (2%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
Q + + +R T T VLK C H +K GL+ D FV +L
Sbjct: 165 QEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGAL 224
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+N+Y CG + DA +FD + +++VV W ++ GY+ G +EA +F GL+PD
Sbjct: 225 VNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDE 284
Query: 132 FSIVRVLTACTQLG--DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
FS+ +L C G DL K +HG ++G +V VA SLV++Y+K G AR VF
Sbjct: 285 FSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVF 344
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL-----SACAS 244
+ M D++SW+SMI A + +E++++F ++ E LKP+++T+ + AC
Sbjct: 345 NDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGC 404
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
L L+ G + + F S+ + + ++DMY KCG M A VF + D V W ++
Sbjct: 405 LVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSM 464
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
+SG NG A ++ ++ + + P+ TF L+ + +++GRQ ++ ++
Sbjct: 465 ISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDC 524
Query: 365 LT-PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
++ P + +VD+ + G +++A+ L K M + N +W A+L G H + A ++
Sbjct: 525 VSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAEEAVNL 581
Query: 424 LNQLIA--LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
+ + +EP +LS A + SM D GI+
Sbjct: 582 FKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIE 627
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 213/406 (52%), Gaps = 18/406 (4%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+ H+ LG +H+ IV +G D F+ +LL +Y CG L+ A +VFD P+++
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 96 VVSWTAIISGYI-----NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+V+W AI+ Y N+GN +E +++FR L ++ VL C G L A
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ +HGY + G +VFV+ +LV++Y+KCG M AR +FD M E+D+V W+ M++GY
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA--LELGVWASSFMERNEFLSNPV 268
G KEA +F R L+P+ +++ +L+ C G LELG ++ S+
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS 322
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ +L++MY+K G A +VF +MK D + WN+++S + + + + +F L G
Sbjct: 323 VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG 382
Query: 329 IQPNGNTFVGLL-------CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++P+ T + CGC L+D+G+Q + + + + G ++D+ +
Sbjct: 383 LKPDHFTLASITLATAAKACGCL--VLLDQGKQIHAHAIKAGFDSDLHVNSG-ILDMYIK 439
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
G + A ++ + P+ + W ++++GC + D A + +++
Sbjct: 440 CGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM 484
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/616 (41%), Positives = 375/616 (60%), Gaps = 39/616 (6%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRS---------HSLIVKAGLDCDEFVKTSLLNLYVHC 78
P + + P LK+ ++ L RS H+ +++ G D F+ LL C
Sbjct: 35 PNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKC 94
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
+ A ++F + NV +TA+I G+++ GN +AI ++ R+LH + PD++ + +L
Sbjct: 95 HAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASIL 154
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE---- 194
AC L + +H + G N V +++LY KCG + ARRVF++MPE
Sbjct: 155 KACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVA 214
Query: 195 --------------------------KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
KD V W++MI G+ N AL+ F MQ EN+
Sbjct: 215 STVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENV 274
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+P +T+V VLSAC+ LGALE+G W S+M + E N +G LI+MY++CG + +A
Sbjct: 275 RPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQT 334
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF EMKD+D + +N ++SGLSMNG + A +F + ++P TFVG+L C+H GL
Sbjct: 335 VFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGL 394
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
VD G + F+SM+R + + P IEHYGCMVDLLGR G+L+EA++LI++M M P+ I+ G LL
Sbjct: 395 VDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLL 454
Query: 409 AGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQK 468
+ C++HK +L E V L +SG YVLLS++Y++S KW +AA++R+ M + G+QK
Sbjct: 455 SACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQK 514
Query: 469 IRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEE 528
GCS +EV+ +HEFL+GD HP E+IY KL+EL L+ G+ P + VL DIE+ E
Sbjct: 515 EPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGE 574
Query: 529 KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNN 588
K++ LA HSE+LA+ +GLI+T P VIR+ KNLRVC DCH AIKLI+KIT R+++VRD N
Sbjct: 575 KEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRN 634
Query: 589 RFHCFIEGSCSCKDFW 604
RFH F G+CSC D+W
Sbjct: 635 RFHYFENGACSCGDYW 650
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 200/371 (53%), Gaps = 33/371 (8%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GFVS+ + AI+ Y+ M ++ LP N+ +LKAC + + G HS +K G
Sbjct: 118 LIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLG 177
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--------------------------- 93
L + V+ ++ LY CG L DA +VF+++P+
Sbjct: 178 LSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSR 237
Query: 94 ---KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
K+ V WTA+I G++ + A+ FR + ++P+ F+IV VL+AC+QLG L
Sbjct: 238 VRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG 297
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+W+H Y+ + N+FV +L+++Y++CG++++A+ VFD+M ++D++++++MI G + N
Sbjct: 298 RWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMN 357
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G ++A+++F M L+P T VGVL+AC+ G ++ G M R+ + +
Sbjct: 358 GKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEH 417
Query: 271 T-TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
++D+ + GR+ +A + R MK D ++ ++S M+ +++ V LE G
Sbjct: 418 YGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRG 477
Query: 329 IQPNGNTFVGL 339
Q + T+V L
Sbjct: 478 -QADSGTYVLL 487
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 138/296 (46%), Gaps = 36/296 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GFV N+ A+E + M+ E P FT VL AC++ ++G HS + K
Sbjct: 249 MIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE 308
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ + FV +L+N+Y CG + +A VFD++ D++V+++ +ISG G +AI +FR
Sbjct: 309 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFR 368
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ R L+P + + V VL AC+ G + K H + G + +VDL +
Sbjct: 369 VMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRV 428
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E EA D+ M+ + P++ + +L
Sbjct: 429 GRLE-------------------------------EAYDLIRTMK---MTPDHIMLGTLL 454
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
SAC LELG + +E + ++ L +YA G+ +A +V +MK+
Sbjct: 455 SACKMHKNLELGEQVAKVLE-DRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKE 509
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/604 (40%), Positives = 365/604 (60%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N + A+E N M E P+ T VL A + ++G H ++AG
Sbjct: 207 IVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAG 266
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + T+L+++Y CG L A +FD + ++NVVSW ++I Y+ N +EA+ +F+
Sbjct: 267 FDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQ 326
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L G+KP S++ L AC LGDL ++IH E RNV V SL+ +Y KC
Sbjct: 327 KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCK 386
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +F ++ + IVSW++MI G+A NG P EAL+ F MQ +KP+ +T V V++
Sbjct: 387 EVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVIT 446
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A L W + RN N + T L+DMYAKCG + A +F M ++
Sbjct: 447 AIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTT 506
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G +G K A +F +++K I+PNG TF+ ++ C+H+GLV+ G + F+ M
Sbjct: 507 WNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMK 566
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+S+ P ++HYG MVDLLGR+G+L+EA + I MP++P V+GA+L C++HK + A
Sbjct: 567 ENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA 626
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V +L L P + G +VLL+NIY A+ W ++R M +G++K GCS VE+
Sbjct: 627 EKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNE 686
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F G +HP S+KIY+ L++L ++K AG+VP T+ +L +E++ K+ L+ HSEKL
Sbjct: 687 VHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKL 745
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A++FGL+ T I + KNLRVC DCH A K IS +TGREIIVRD RFH F G+CSC
Sbjct: 746 AISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSC 805
Query: 601 KDFW 604
D+W
Sbjct: 806 GDYW 809
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 217/421 (51%), Gaps = 16/421 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++GF A++F+ MR++ P + F ++LK C E + ++G H L+VK+G
Sbjct: 106 MLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D F T L N+Y C + +A KVFD +P++++VSW I++GY G A+ M
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVN 225
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ LKP +IV VL A + L + K IHGY AG V +AT+LVD+YAKCG
Sbjct: 226 LMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCG 285
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ AR +FD M E+++VSW+SMI Y N PKEA+ +F M E +KP +++G L
Sbjct: 286 SLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALH 345
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LG LE G + E N + +LI MY KC + A +F +++ + V
Sbjct: 346 ACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVS 405
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G + NG A F Q++ ++P+ T+V ++ + + +
Sbjct: 406 WNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 465
Query: 361 R------VFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
R VF T +++ Y C ++ R LI M E + W A++ G
Sbjct: 466 RNCLDKNVFVTTALVDMYAKCGAIMIAR---------LIFDMMSERHVTTWNAMIDGYGT 516
Query: 414 H 414
H
Sbjct: 517 H 517
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 190/356 (53%), Gaps = 2/356 (0%)
Query: 55 LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEE 114
LI K GL + +T L++L+ G + +A +VF+ I K V + ++ G+ +L++
Sbjct: 59 LIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDK 118
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A+ F R+ ++P ++ +L C +L K IHG + ++G ++F T L +
Sbjct: 119 ALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+YAKC + +AR+VFD+MPE+D+VSW++++ GY+ NG + AL+M M ENLKP + T
Sbjct: 179 MYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFIT 238
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+V VL A ++L + +G + R F S + T L+DMYAKCG + A +F M
Sbjct: 239 IVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGML 298
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+++ V WN+++ N K A +F ++ G++P + +G L C G ++ GR
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR- 357
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F + +S L + ++ + + ++D A + + + W A++ G
Sbjct: 358 FIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKL-QSRTIVSWNAMILG 412
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/628 (39%), Positives = 378/628 (60%), Gaps = 37/628 (5%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
I FY +R+ G F+F +LKA ++ G+ H + K CD FV+T ++
Sbjct: 95 TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMD 154
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG + A VFD++ ++VV+W +I Y G ++EA +F + + PD
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNE-----------------AGKG------------- 163
+ +++AC + G++ + I+ ++ E AG G
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 164 -RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
RN+FV+T++V Y+KCG ++ A+ +FDQ +KD+V W++MI Y + +P+EAL +F
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M +KP+ +M V+SACA+LG L+ W S + N S + LI+MYAKCG
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ VF +M ++ V W+++++ LSM+G A +F ++++ ++PN TFVG+L G
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
C+H+GLV+EG++ F SM+ +++TP +EHYGCMVDL GR+ L EA E+I+SMP+ N +
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514
Query: 403 VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMG 462
+WG+L++ CR+H + +L + +++ LEP + G VL+SNIY+ +W D IR +M
Sbjct: 515 IWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVME 574
Query: 463 DKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLF 522
+K + K +G S ++ +G HEFL+GD H S +IY+KLDE+ +KLK AG+VP VL
Sbjct: 575 EKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLV 634
Query: 523 DIEEEEKQYFLACHSEKLALAFGLITTAPKD------VIRIAKNLRVCGDCHEAIKLISK 576
D+EEEEK+ + HSEKLAL FGL+ ++ VIRI KNLRVC DCH KL+SK
Sbjct: 635 DVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSK 694
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ REIIVRD RFHC+ G CSC+D+W
Sbjct: 695 VYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 110/244 (45%), Gaps = 5/244 (2%)
Query: 185 ARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
A VF +P + + ++ ++ + + P+ + + ++ + + ++ + +L A +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+ AL G+ + L +P + T +DMYA CGR+ A VF EM +D V WN
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
++ G V AF +F +++ + P+ ++ C G + R + + +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL--IE 240
Query: 364 SLTPMIEH-YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ M H +V + +G +D A E + M + N V A+++G + D A+
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVSGYSKCGRLDDAQV 299
Query: 423 VLNQ 426
+ +Q
Sbjct: 300 IFDQ 303
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/577 (42%), Positives = 367/577 (63%), Gaps = 1/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + TF L ACAR D + G AG D FV +SLL+LY G + DA+KV
Sbjct: 106 PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F +P ++ V+W+ +++G+++ G +AI M+RR+ G+K D ++ V+ ACT ++
Sbjct: 166 FVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNV 225
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+HG++ G +V ATSLVD+YAK G ++ A RVF M ++ VSWS+MI G+
Sbjct: 226 RMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A NG EAL +F NMQ ++P+ +V L AC+++G L+LG F+ R F N
Sbjct: 286 AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNC 344
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+LGT IDMY+KCG +A A +F + D+D ++WNA+++ +G + A +F ++ +
Sbjct: 345 ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNET 404
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++P+ TF LL +H+GLV+EG+ +F M F +TP +HY C+VDLL RSG ++E
Sbjct: 405 GMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEE 464
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A +L+ SM EP +W ALL+GC +KK +L E + + ++ L+P + G L+SN+Y+A
Sbjct: 465 ASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAA 524
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ KW+ ++R +M D G +K+ GCS +E+ G H F++ D SHP E+I SK+ +L +
Sbjct: 525 TKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLE 584
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
++ G++P T+ V D+EEE K+ L+ HSE+LA+AFGL+ T P + I KNLRVCGDC
Sbjct: 585 MRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDC 644
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H+AIK ISKI REI+VRD RFH F +G CSC+D+W
Sbjct: 645 HDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 168/311 (54%), Gaps = 4/311 (1%)
Query: 106 YINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+ G+ A+ +FR L +PDS + L+AC +LGDL + + +AG +
Sbjct: 84 HSRRGSPASALRVFR-ALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
VFV +SL+ LYA+ G M A +VF +MP +D V+WS+M+ G+ S G P +A+ M+ M+
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
+ +K + M+GV+ AC + + +G + R+ + V T+L+DMYAK G +
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
AC+VF M ++ V W+A++SG + NG A +F ++ GIQP+ V L C++
Sbjct: 263 ACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSN 322
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
G + GR + R F ++ +D+ + G L A +++ +M + + I+W
Sbjct: 323 IGFLKLGRSVHGFIVRRFDFNCILGT--AAIDMYSKCGSLASA-QMLFNMISDRDLILWN 379
Query: 406 ALLAGCRLHKK 416
A++A C H +
Sbjct: 380 AMIACCGAHGR 390
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 170/311 (54%), Gaps = 7/311 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GFVS AI+ Y MR +G V++AC + ++G H +++ G
Sbjct: 180 MVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHG 239
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D TSL+++Y G L A +VF + +N VSW+A+ISG+ G +EA+ +FR
Sbjct: 240 MRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFR 299
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++PDS ++V L AC+ +G L + +HG++ N + T+ +D+Y+KCG
Sbjct: 300 NMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDF-NCILGTAAIDMYSKCG 358
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+ +F+ + ++D++ W++MI ++G ++AL +F M ++P++ T +LS
Sbjct: 359 SLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLS 418
Query: 241 ACASLGALELG-VWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDKD 297
A + G +E G +W + N F P L+D+ A+ G + +A + MK +
Sbjct: 419 ALSHSGLVEEGKLWFGRMV--NHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEP 476
Query: 298 QV-VWNAVVSG 307
V +W A++SG
Sbjct: 477 TVAIWVALLSG 487
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/605 (41%), Positives = 376/605 (62%), Gaps = 26/605 (4%)
Query: 23 NEGFLPTNFT-----FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVH 77
N G P N F +L+ C +H+ Q+ ++ I++ D FV LL + +
Sbjct: 20 NSGTKPKNTPNRRRHFISLLQNC--KHNNQIP-PIYAKIIRNHHHQDPFVVFELLRVCSN 76
Query: 78 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
+ A K+F + NV +TA+I G + + I+++ ++++ L PDS+++ V
Sbjct: 77 LNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSV 136
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI 197
L AC L + +H V + G N + L++LY KCG E ARRVFD+MPE+D+
Sbjct: 137 LKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDV 196
Query: 198 VS------------------WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
V+ W++MI G NG AL++F NMQRE++ P T+V VL
Sbjct: 197 VASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVL 256
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SAC+ LGAL+LG W S+M+++ N +G LI+MY++CG + +A +VF +MK+K+ +
Sbjct: 257 SACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVI 316
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+N+++ G +++G A +F L K G P+ TFVG+L C+H GL + G + F+SM
Sbjct: 317 TYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSM 376
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
++ + + P IEHYGCMVDLLGR G+L+EA+ I+ M + P+ ++ GALL+ C++H +L
Sbjct: 377 AKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLEL 436
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE V L+A + +SG Y+LLSN YS+S KW +AA++R+ M ++GI+K GCS +EV+
Sbjct: 437 AERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNN 496
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+HEFL+GD HP EKIY KL+EL L+ G+ P T+ VL DIE+ EK++ LA HSE+
Sbjct: 497 EIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYTPATEVVLHDIEKSEKEWALAIHSER 556
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+ +GLI+T P +R+ KNLRVC DCH IKLIS IT R+I+VRD NRFH F G CS
Sbjct: 557 LAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKLISNITRRKIVVRDRNRFHHFENGVCS 616
Query: 600 CKDFW 604
C D+W
Sbjct: 617 CGDYW 621
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 233/473 (49%), Gaps = 47/473 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V + + I Y M N +P ++ VLKAC + G HS ++K G
Sbjct: 101 LIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLG 160
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS------------------WTAI 102
L + ++ L+ LY CG DA +VFD++P+++VV+ WTA+
Sbjct: 161 LSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAM 220
Query: 103 ISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK 162
I G + G A+ +FR + + P+ +IV VL+AC++LG L +W+ Y+++
Sbjct: 221 IDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRI 280
Query: 163 GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
N FV +L+++Y++CG++++A+RVF+QM EK++++++SMI G+A +G EA+++F
Sbjct: 281 ELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRG 340
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT-TLIDMYAKCG 281
+ ++ P T VGVL+AC+ G ELG M ++ + + ++D+ + G
Sbjct: 341 LIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLG 400
Query: 282 RMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
R+ +A R MK D V+ A++S ++G +++A V L C +G T++ L
Sbjct: 401 RLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSG-TYILLS 459
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
+ +G E + +M + + GC +E N
Sbjct: 460 NAYSSSGKWKEAAEVRTNMRE----EGIEKEPGC--------------------SSIEVN 495
Query: 401 AIVWGALLAGCRLHKKTDLAEHV--LNQLIALEPWNSGNYVLLSNIYSASHKW 451
+ LL R +K + + + LNQ++ LE + V+L +I + +W
Sbjct: 496 NEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYTPATEVVLHDIEKSEKEW 548
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/604 (40%), Positives = 365/604 (60%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V N AIE M+ G +P FT +LKAC+ F LG + H ++KA
Sbjct: 274 LISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKAN 333
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D+++ L+++Y +L DA KVFD + ++++ A+ISG + G +EA+++F
Sbjct: 334 ADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFY 393
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L GL + ++ VL + L ST + +H + G + V L+D Y KC
Sbjct: 394 ELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCS 453
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A RVF++ DI++ +SMI + + A+ +F M R+ L+P+ + + +L+
Sbjct: 454 CLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLN 513
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL A E G + + + +F+S+ G L+ YAKCG + A F + ++ V
Sbjct: 514 ACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS 573
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ GL+ +G+ K A +FG++ GI PN T +LC C HAGLVDE +++FNSM
Sbjct: 574 WSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMK 633
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+F + EHY CM+DLLGR+G+LD+A EL+ SMP + NA +WGALL R+HK +L
Sbjct: 634 EMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELG 693
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ +L LEP SG +VLL+N Y+++ WN+ AK+R +M D I+K SW+EV
Sbjct: 694 KLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDK 753
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F+VGD SHP++++IY+KL EL + AGFVP D L D++ EK+ L+ HSE+L
Sbjct: 754 VHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERL 813
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF L++T P IR+ KNLR+C DCH A K ISKI REII+RD NRFH F +G+CSC
Sbjct: 814 AVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSC 873
Query: 601 KDFW 604
D+W
Sbjct: 874 GDYW 877
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 226/455 (49%), Gaps = 15/455 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ +V ND AI+ + M G PT F F V+ AC + + G + H+++V+ G
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D F +L+++Y+ G + A +F+ +PD +VVSW A+ISG + G+ AI +
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + GL P+ F++ +L AC+ G + IHG++ +A + ++ LVD+YAK
Sbjct: 293 QMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNH 352
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR+VFD M +D++ +++I G + G EAL +FY +++E L T+ VL
Sbjct: 353 FLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLK 412
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+ ASL A + + F+ + + LID Y KC ++ A +VF E D +
Sbjct: 413 STASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIA 472
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS-- 358
++++ LS + + A +F ++ + G++P+ LL C ++G+Q
Sbjct: 473 CTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532
Query: 359 ----MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
MS F+ ++ Y + G +++A S+P E + W A++ G H
Sbjct: 533 KRQFMSDAFAGNALVYTY-------AKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQH 584
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
A + +++ E N + + S + + +H
Sbjct: 585 GHGKRALELFGRMVD-EGINPNHITMTSVLCACNH 618
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 183/341 (53%), Gaps = 4/341 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ + +N + AI+ ++ MR EG F P VLK D +LG + H++ + G
Sbjct: 74 LVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DARLGAQVHAMAMATG 130
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDI-PDKNVVSWTAIISGYINEGNLEEAINMF 119
D FV +L+ +Y G++ DA +VF++ ++N VSW ++S Y+ +AI +F
Sbjct: 131 FGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVF 190
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G++P F V+ ACT ++ + +H V G ++VF A +LVD+Y K
Sbjct: 191 GEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKM 250
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ A +F++MP+ D+VSW+++I G NG A+++ M+ L P +T+ +L
Sbjct: 251 GRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSIL 310
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+ GA +LG FM + S+ +G L+DMYAK + A KVF M +D +
Sbjct: 311 KACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLI 370
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
+ NA++SG S G A +F +L K G+ N T +L
Sbjct: 371 LCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 187/380 (49%), Gaps = 8/380 (2%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G H+ ++K+G + L++ Y C A +VFD+IPD VSW+++++ Y N
Sbjct: 23 GAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
G AI F + G+ + F++ VL + D +H G G +VFV
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFV 137
Query: 169 ATSLVDLYAKCGNMEKARRVFDQM-PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
A +LV +Y G M+ ARRVF++ E++ VSW+ ++ Y N +A+ +F M
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
++P + V++AC +E G + + R + + L+DMY K GR+ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+F +M D D V WNA++SG +NG+ A + Q++ G+ PN T +L C+ AG
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
D GRQ M + + + G +VD+ ++ LD+A ++ M + I+ AL
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDARKVFDWM-FHRDLILCNAL 375
Query: 408 LAGCRLHKKTDLAEHVLNQL 427
++GC + D A + +L
Sbjct: 376 ISGCSHGGRHDEALSLFYEL 395
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/604 (40%), Positives = 365/604 (60%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V N AIE M+ G +P FT +LKAC+ F LG + H ++KA
Sbjct: 274 LISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKAN 333
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D+++ L+++Y +L DA KVFD + ++++ A+ISG + G +EA+++F
Sbjct: 334 ADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFY 393
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L GL + ++ VL + L ST + +H + G + V L+D Y KC
Sbjct: 394 ELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCS 453
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A RVF++ DI++ +SMI + + A+ +F M R+ L+P+ + + +L+
Sbjct: 454 CLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLN 513
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL A E G + + + +F+S+ G L+ YAKCG + A F + ++ V
Sbjct: 514 ACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS 573
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ GL+ +G+ K A +FG++ GI PN T +LC C HAGLVDE +++FNSM
Sbjct: 574 WSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMK 633
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+F + EHY CM+DLLGR+G+LD+A EL+ SMP + NA +WGALL R+HK +L
Sbjct: 634 EMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELG 693
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ +L LEP SG +VLL+N Y+++ WN+ AK+R +M D I+K SW+EV
Sbjct: 694 KLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDK 753
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F+VGD SHP++++IY+KL EL + AGFVP D L D++ EK+ L+ HSE+L
Sbjct: 754 VHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERL 813
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF L++T P IR+ KNLR+C DCH A K ISKI REII+RD NRFH F +G+CSC
Sbjct: 814 AVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSC 873
Query: 601 KDFW 604
D+W
Sbjct: 874 GDYW 877
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 226/455 (49%), Gaps = 15/455 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ +V ND AI+ + M G PT F F V+ AC + + G + H+++V+ G
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D F +L+++Y+ G + A +F+ +PD +VVSW A+ISG + G+ AI +
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + GL P+ F++ +L AC+ G + IHG++ +A + ++ LVD+YAK
Sbjct: 293 QMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNH 352
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR+VFD M +D++ +++I G + G EAL +FY +++E L T+ VL
Sbjct: 353 FLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLK 412
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+ ASL A + + F+ + + LID Y KC ++ A +VF E D +
Sbjct: 413 STASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIA 472
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS-- 358
++++ LS + + A +F ++ + G++P+ LL C ++G+Q
Sbjct: 473 CTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532
Query: 359 ----MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
MS F+ ++ Y + G +++A S+P E + W A++ G H
Sbjct: 533 KRQFMSDAFAGNALVYTY-------AKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQH 584
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
A + +++ E N + + S + + +H
Sbjct: 585 GHGKRALELFGRMVD-EGINPNHITMTSVLCACNH 618
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 183/341 (53%), Gaps = 4/341 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ + +N + AI+ ++ MR EG F P VLK D +LG + H++ + G
Sbjct: 74 LVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DARLGAQVHAMAMATG 130
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDI-PDKNVVSWTAIISGYINEGNLEEAINMF 119
D FV +L+ +Y G++ DA +VF++ ++N VSW ++S Y+ +AI +F
Sbjct: 131 FGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVF 190
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G++P F V+ ACT ++ + +H V G ++VF A +LVD+Y K
Sbjct: 191 GEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKM 250
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ A +F++MP+ D+VSW+++I G NG A+++ M+ L P +T+ +L
Sbjct: 251 GRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSIL 310
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+ GA +LG FM + S+ +G L+DMYAK + A KVF M +D +
Sbjct: 311 KACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLI 370
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
+ NA++SG S G A +F +L K G+ N T +L
Sbjct: 371 LCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 186/380 (48%), Gaps = 8/380 (2%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G H+ ++K+G + L++ Y C A + FD+IPD VSW+++++ Y N
Sbjct: 23 GAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
G AI F + G+ + F++ VL + D +H G G +VFV
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFV 137
Query: 169 ATSLVDLYAKCGNMEKARRVFDQM-PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
A +LV +Y G M+ ARRVF++ E++ VSW+ ++ Y N +A+ +F M
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
++P + V++AC +E G + + R + + L+DMY K GR+ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+F +M D D V WNA++SG +NG+ A + Q++ G+ PN T +L C+ AG
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
D GRQ M + + + G +VD+ ++ LD+A ++ M + I+ AL
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDARKVFDWM-FHRDLILCNAL 375
Query: 408 LAGCRLHKKTDLAEHVLNQL 427
++GC + D A + +L
Sbjct: 376 ISGCSHGGRHDEALSLFYEL 395
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/636 (38%), Positives = 377/636 (59%), Gaps = 32/636 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++R + + I Y+++R F F+FP +LKA ++ F G+ H L K
Sbjct: 91 LLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKL 150
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D F++T L+ +Y C + DA +FD + + V+W II GY G+ ++A+ +F
Sbjct: 151 GFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLF 210
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +KPDS + VL+AC G+LS + IH +V + G + + T+L+++YA C
Sbjct: 211 EDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANC 270
Query: 180 GNMEKARRV-------------------------------FDQMPEKDIVSWSSMIQGYA 208
G M+ AR++ FDQM E+D+V WS+MI GYA
Sbjct: 271 GAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYA 330
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+ P+EAL +F M ++ P+ TM+ V+SAC+ +GAL W ++++R+ F
Sbjct: 331 ESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALS 390
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ LIDMYAKCG + +A +VF M K+ + W+++++ +M+G A +F ++++
Sbjct: 391 VNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVN 450
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
I+PNG TF+G+L C HAGLV+EG + F+SM ++P EHYGCMVDL R+ L +A
Sbjct: 451 IEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKA 510
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
ELI++MP PN I+WG+L++ C++H + +L E +L+ LEP + G V+LSNIY+
Sbjct: 511 IELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKE 570
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
+WND IR M KGI K + S +E++ VH F++ D H S++IY KLDE+ +KL
Sbjct: 571 KRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKL 630
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
K G+ P+T +L D+EEE+K+ + HSEKLA+ +GLI+ + IRI KNLR+C DCH
Sbjct: 631 KLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIRIVKNLRICEDCH 690
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+KL+SK+ EI+VRD RFH G CSC+D+W
Sbjct: 691 SFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 112/243 (46%), Gaps = 5/243 (2%)
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLG 246
VF Q+P + +++ + + FP++ + +++N++ N + ++ +L A + +
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
A G+ + F+ +P + T LI MYA C R+ A +F +M D V WN ++
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS-RVFSL 365
G NG+ A +F + ++P+ +L C HAG + GR + +++
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
++ ++++ G +D A ++ + + IV A+L+G A + +
Sbjct: 256 DSHLQ--TALINMYANCGAMDLARKIYDGLS-SKHLIVSTAMLSGYAKLGMVKDARFIFD 312
Query: 426 QLI 428
Q+I
Sbjct: 313 QMI 315
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/602 (40%), Positives = 374/602 (62%), Gaps = 10/602 (1%)
Query: 7 SNDCFQ----HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLD 62
+N C Q A+ ++M G T+ ++K C+ Q G R H I G +
Sbjct: 28 ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE 87
Query: 63 CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL 122
FV +LLN+YV L +A +FD++P++NVVSWT +IS Y N+ N ++A+ +
Sbjct: 88 PKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLN-DKALKCLILM 146
Query: 123 LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
G++P+ F+ VL AC L +L + +H + + G +VFV ++L+D+Y+K ++
Sbjct: 147 FREGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDL 203
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
+ A VFD+MP +D+V W+S+I G+A N EAL++F M+R + T+ VL AC
Sbjct: 204 DNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRAC 263
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
L LELG + + F + +L LIDMY KCG + A F M +KD + W+
Sbjct: 264 TGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWS 321
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
+V+GL+ NGY + A +F +++ G +PN T +G+L C+HAGLV++G +F SM ++
Sbjct: 322 TMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKL 381
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
F + P EHYGC++DLLGR+G+LDEA +LI M EP+++ W LL CR+H+ DLA +
Sbjct: 382 FGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIY 441
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
++I LEP ++G Y+LLSNIY+ + +W D A++R M ++GI+K GCSW+EVD +H
Sbjct: 442 AAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIH 501
Query: 483 EFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
F++GD SHP E+I +L++L ++ G+VP T+ VL D+E E+K+ L HSEKLA+
Sbjct: 502 VFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAI 561
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
FGL+ + + +RI KNLR+CGDCH K++S++ R I++RD R+H F +G CSC D
Sbjct: 562 MFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGD 621
Query: 603 FW 604
+W
Sbjct: 622 YW 623
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 8/208 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF N A+ + M+ GFL T VL+AC +LG + H ++K
Sbjct: 224 IIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK-- 281
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D + +L+++Y CG L DA F + +K+V+SW+ +++G G +A+ +F
Sbjct: 282 FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFE 341
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE---AGKGRNVFVATSLVDLYA 177
+ G +P+ +++ VL AC+ G + + + + GR + L+DL
Sbjct: 342 SMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHY--GCLIDLLG 399
Query: 178 KCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ G +++A ++ +M E D V+W +++
Sbjct: 400 RAGRLDEAVKLIHEMECEPDSVTWRTLL 427
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/605 (40%), Positives = 366/605 (60%), Gaps = 22/605 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+VSN + + Y M G T VL CA LG HSL +K+
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +LL++Y CG L AL+VF+ + ++NVVSWT++I+GY +G + AI + +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQ 341
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+K D +I +L AC + G L K +H Y+ N+FV +L+D+YAKCG
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCG 401
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ME A VF M KDI+SW++M+ LKP+ TM +L
Sbjct: 402 SMEGANSVFSTMVVKDIISWNTMVG---------------------ELKPDSRTMACILP 440
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL ALE G ++ RN + S+ + L+D+Y KCG + A +F + KD V
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 500
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G M+GY A F ++ GI+P+ +F+ +L C+H+GL+++G +FF M
Sbjct: 501 WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
F++ P +EHY CMVDLL R+G L +A++ I+++P+ P+A +WGALL GCR++ +LA
Sbjct: 561 NDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELA 620
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V ++ LEP N+G YVLL+NIY+ + K + ++R +G KG++K GCSW+E+ G
Sbjct: 621 EKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGR 680
Query: 481 VHEFLVGDN-SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V+ F+ G+N SHP S+KI S L ++ K+K G+ P T + L + +E +K+ L HSEK
Sbjct: 681 VNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEK 740
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL+T P+ IR+ KNLRVCGDCHE K +SK T REI++RD+NRFH F +G CS
Sbjct: 741 LAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCS 800
Query: 600 CKDFW 604
C+ FW
Sbjct: 801 CRGFW 805
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 213/472 (45%), Gaps = 81/472 (17%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ VL+ CA G + HS+I + DE + L++ Y CG L + +VFD +
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 92 PDKNV---------------------------------------------------VSWT 100
KNV +SW
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220
Query: 101 AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
++ISGY++ G E + +++++++ G+ D +I+ VL C G LS K +H ++
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
R + + +L+D+Y+KCG+++ A RVF++M E+++VSW+SMI GY +G+ A+ +
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILL 340
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
M++E +K + + +L ACA G+L+ G +++ N SN + L+DMYAKC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKC 400
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G M A VF M KD + WN +V L +P+ T +L
Sbjct: 401 GSMEGANSVFSTMVVKDIISWNTMVGEL---------------------KPDSRTMACIL 439
Query: 341 CGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP 399
C ++ G++ + R +S + + +VDL + G L A L +P
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVAN--ALVDLYVKCGVLGLARLLFDMIP-SK 496
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSASH 449
+ + W ++AG +H + A N++ +EP +S +Y+ SH
Sbjct: 497 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP---DEVSFISILYACSH 545
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 165/376 (43%), Gaps = 55/376 (14%)
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
D V + A I + G+LE A+ + L+ ++ VL C L L+ K
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETKTYG--SVLQLCAGLKSLTDGKK 120
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM-------------------- 192
+H + G + + LV YA CG++++ RRVFD M
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 193 --------------------PE-----------KDIVSWSSMIQGYASNGFPKEALDMFY 221
PE +D++SW+SMI GY SNG + L ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
M + + T++ VL CA+ G L LG S ++ F TL+DMY+KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
+ A +VF +M +++ V W ++++G + +G+ A + Q+EK G++ + +L
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILH 360
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C +G +D G+ + + + ++ + ++D+ + G ++ A+ + +M ++ +
Sbjct: 361 ACARSGSLDNGKDVHDYI-KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DI 418
Query: 402 IVWGALLAGCRLHKKT 417
I W ++ + +T
Sbjct: 419 ISWNTMVGELKPDSRT 434
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/600 (42%), Positives = 372/600 (62%), Gaps = 9/600 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ ++SMR PT +FP +KAC+ D G ++H G D FV ++L+
Sbjct: 60 ALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIV 119
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL------HRGL 127
+Y CG L DA KVFD+IP +N+VSWT++I GY GN +A+++F+ LL +
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN--MEKA 185
DS +V V++AC+++ + IH +V + G R V V +L+D YAK G + A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP-EYYTMVGVLSACAS 244
R++FDQ+ +KD VS++S++ YA +G EA ++F + + + T+ VL A +
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
GAL +G + R + ++GT++IDMY KCGR+ A K F MK+K+ W A+
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM 359
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
++G M+G+ A +F + G++PN TFV +L C+HAGL EG ++FN+M F
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ P +EHYGCMVDLLGR+G L +A++LI+ M M+P++I+W +LLA CR+HK +LAE +
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISV 479
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+L L+ N G Y+LLS+IY+ + +W D ++R +M ++G+ K G S +E++G VH F
Sbjct: 480 ARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVF 539
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
L+GD HP EKIY L EL KL AG+V T V D++EEEK+ L HSEKLA+AF
Sbjct: 540 LIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAF 599
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
G++ T P + + KNLRVC DCH IKLISKI RE +VRD RFH F +G CSC D+W
Sbjct: 600 GIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 200/393 (50%), Gaps = 27/393 (6%)
Query: 87 VFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+F+ DK +V SW ++I+ G+ EA+ F + L P S + AC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D+ + K H G ++FV+++L+ +Y+ CG +E AR+VFD++P+++IVSW+SMI+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 206 GYASNGFPKEALDMFYNM------QRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
GY NG +A+ +F ++ + + + +V V+SAC+ + A L SF+
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 260 RNEFLSNPVLGTTLIDMYAKCGR--MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ F +G TL+D YAK G +A A K+F ++ DKD+V +N+++S + +G A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 318 FGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
F VF +L K + N T +L +H+G + G+ + + R+ L + ++
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSII 329
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWN 434
D+ + G+++ A + M N W A++AG +H A + +I + P
Sbjct: 330 DMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP-- 386
Query: 435 SGNYVLLSNIYSA-SH--------KWNDAAKIR 458
NY+ ++ +A SH +W +A K R
Sbjct: 387 --NYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/623 (41%), Positives = 370/623 (59%), Gaps = 44/623 (7%)
Query: 22 RNEGFLPTN---FTFPFV--LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN--- 73
+N ++PT +P + L +C D + H+ + G+ D FV + +L+
Sbjct: 22 QNPPWIPTPQLLCKYPILRHLSSCKTLKDL---TQIHAQTITTGIFSDNFVASRILSFAA 78
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK-PDSF 132
L H G + A +F I ++ +I Y N +A+ + + + PD
Sbjct: 79 LSPH-GSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVH 137
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA------- 185
+ +L AC+++ L + IH +V + G V V+ LV +YA CG +E A
Sbjct: 138 TFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRT 197
Query: 186 ------------------------RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
RR+F+ MP++D+VSWS MI GY KE L +F
Sbjct: 198 PECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQ 257
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
+M E ++P +V LSACA LGA+E G W +MER LGT LIDMY+KCG
Sbjct: 258 DMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCG 317
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
+ +A +VF +MK+K+ + W+A+++GL++NG K A +F Q+E G++PN TF+G+L
Sbjct: 318 SVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILN 377
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C+H+ LVDEG FF+SM+ ++ L P H+ CMVDL GR+G LD+A +IKSMP +PN+
Sbjct: 378 ACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNS 437
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMM 461
+WGALL CR+H T+L E V +L+ L+P + G YVLLSNIY+A +W+ A++R MM
Sbjct: 438 AIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMM 497
Query: 462 GDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVL 521
++ + K GCS++++ +HEF+ GD+SHP E IY+KL E++ +LKAAG+ P T VL
Sbjct: 498 RERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVL 557
Query: 522 FDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGRE 581
D++EEEK+ L HSEKLA+AFGLI T P IRI KNLRVC DCH A KLISKI RE
Sbjct: 558 LDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNRE 617
Query: 582 IIVRDNNRFHCFIEGSCSCKDFW 604
IIVRD RFH F +GSCSC DFW
Sbjct: 618 IIVRDRCRFHHFRDGSCSCMDFW 640
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 209/438 (47%), Gaps = 52/438 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHS----- 54
+IR + + A+ FY+ M + P TFP +LKAC+ +LG HS
Sbjct: 106 LIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKL 165
Query: 55 --------------------LIVKAGL------DCDEFVKTSLLNLYVHCGYLADALKVF 88
LI AGL +CD ++ Y+ CG A ++F
Sbjct: 166 GWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMF 225
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+ +PD++VVSW+ +I+GY+ E +E + +F+ ++ ++P+ +V L+AC LG +
Sbjct: 226 EAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAME 285
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+WI Y+ V + T+L+D+Y+KCG++E+A VF +M EK++++WS+MI G A
Sbjct: 286 QGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLA 345
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV-WASSFMERNEFLSNP 267
NG K+AL++F M+ + +KP T +G+L+AC+ ++ G + S N
Sbjct: 346 INGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNA 405
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
++D+Y + G + QA V + M K + +W A+++ ++G ++ V +L +
Sbjct: 406 HHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLE 465
Query: 327 CGIQPN-GNTFV---GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
+ PN G +V + C V E R+ R S TP GC LG
Sbjct: 466 --LDPNHGGRYVLLSNIYAACGRWDRVAELRRMMR--ERQVSKTP-----GCSFIDLG-- 514
Query: 383 GQLDEAHELIKSMPMEPN 400
D HE + P
Sbjct: 515 ---DTIHEFVAGDSSHPQ 529
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/577 (40%), Positives = 363/577 (62%), Gaps = 2/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + +L C + G H+ I + + D + +LN+Y CG L +A +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD +P K++VSWT +ISGY G EA+ +F ++LH G +P+ F++ +L A
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSD 222
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ +H + + G NV V +SL+D+YA+ +M +A+ +F+ + K++VSW+++I G+
Sbjct: 223 HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH 282
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A G + + +F M R+ +P ++T VL ACAS G+LE G W + + ++
Sbjct: 283 ARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIA 341
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+G TLIDMYAK G + A KVFR + +D V WN+++SG + +G A +F Q+ K
Sbjct: 342 YIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKA 401
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+QPN TF+ +L C+H+GL+DEG+ +F M + + + H+ +VDLLGR+G+L+E
Sbjct: 402 KVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNE 460
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A++ I+ MP++P A VWGALL CR+HK DL + Q+ L+P +SG +VLLSNIY++
Sbjct: 461 ANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYAS 520
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ + +DAAK+R MM + G++K CSWVE++ VH F+ D+SHP+ E+I ++++ K
Sbjct: 521 AGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGK 580
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
+K G+VP T HVLF + +++++ L HSEKLALAF ++ T P IRI KN+R+CGDC
Sbjct: 581 IKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDC 640
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A K S++ GREIIVRD NRFH F+ G CSC+D+W
Sbjct: 641 HSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 182/333 (54%), Gaps = 4/333 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + A+ + M + GF P FT +LKA G + H+ +K G
Sbjct: 177 LISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYG 236
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V +SLL++Y ++ +A +F+ + KNVVSW A+I+G+ +G E + +F
Sbjct: 237 YDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFX 296
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L +G +P F+ VL AC G L KW+H +V ++G ++ +L+D+YAK G
Sbjct: 297 QMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSG 355
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A++VF ++ ++DIVSW+S+I GYA +G EAL +F M + ++P T + VL+
Sbjct: 356 SIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLT 415
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ-V 299
AC+ G L+ G + M++++ + T++D+ + GR+ +A K EM K
Sbjct: 416 ACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAA 475
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
VW A++ M + + GV+ + + P+
Sbjct: 476 VWGALLGACRM--HKNMDLGVYAAEQIFELDPH 506
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 161/302 (53%), Gaps = 3/302 (0%)
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
L+P+ ++L CT L L + IH ++ + ++ + ++++YAKCG++E+A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
+FD+MP KD+VSW+ +I GY+ +G EAL +F M +P +T+ +L A +
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
+ G +F + + N +G++L+DMYA+ M +A +F + K+ V WNA+++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G + G + +F Q+ + G +P T+ +L C +G +++G+ + +
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGG-Q 338
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
P+ ++D+ +SG + +A ++ + + ++ + + W ++++G H A + Q
Sbjct: 339 PIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLFEQ 397
Query: 427 LI 428
++
Sbjct: 398 ML 399
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+L+PE +L+ C L L+ G + ++ + F + VL +++MYAKCG + +A
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
+F +M KD V W ++SG S +G A +F ++ G QPN T LL
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219
Query: 347 GLVDEGRQFFNSMSRVFSLT---PMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
GRQ FSL M H G ++D+ R + EA + S+ + N +
Sbjct: 220 PSDHHGRQL-----HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVV 273
Query: 403 VWGALLAGCRLHKKTDLAEHVL 424
W AL+AG H + EHV+
Sbjct: 274 SWNALIAG---HARKGEGEHVM 292
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/608 (40%), Positives = 369/608 (60%), Gaps = 43/608 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG N F+ ++ + M P T PFVLK+ A D LG H ++K G
Sbjct: 109 LIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLG 168
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN----VVSWTAIISGYINEGNLEEAI 116
L+ D FV+ SL+++YV G L L++FD+ P +N ++ W +I+G
Sbjct: 169 LEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLING----------- 217
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
C ++GDLS A + EA RN SL++ +
Sbjct: 218 ------------------------CCKVGDLSKA----ASLFEAMPERNAGSWNSLINGF 249
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+ G++++AR +F QMPEK++VSW++MI G++ NG ++AL MF+ M E ++P T+V
Sbjct: 250 VRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVV 309
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
L AC +GAL++G +++ N F N +GT L+DMYAKCG + A +VF E K K
Sbjct: 310 SALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGK 369
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
D + W+ ++ G +++G A F +++ GI P+ F+ +L C+H+G VD+G FF
Sbjct: 370 DLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFF 429
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
SM +S+ P ++HY +VDLLGR+G+LDEA I+SMP+ P+ ++WGAL CR HK
Sbjct: 430 ESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKN 489
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
++AE +L+ LEP + G+YV LSN+Y+A +W D ++R++M ++G++K G S++E
Sbjct: 490 IEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIE 549
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
V+G VH F+ GD++H +E+I KL+E+ K G++P T VL +IEEEEK+ L H
Sbjct: 550 VEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSH 609
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEKLALAFGLI+TAP IRI KNLRVCGDCH +K SK++ REII+RD RFH F +G
Sbjct: 610 SEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDG 669
Query: 597 SCSCKDFW 604
+CSC D+W
Sbjct: 670 TCSCGDYW 677
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/674 (37%), Positives = 374/674 (55%), Gaps = 70/674 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F F HA+ ++ M G +P N P +KACA + + H + +G
Sbjct: 85 LIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSG 144
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FV++SL+++Y+ C + DA +VFD + + +VVSW+A+++ Y +G ++EA +F
Sbjct: 145 FDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFS 204
Query: 121 RL----------------------------------LH-RGLKPDSFSIVRVLTACTQLG 145
+ +H RG +PD +I VL A L
Sbjct: 205 EMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLE 264
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI-------- 197
DL IHGYV + G + V+++L+D+Y KC + +VFDQM D+
Sbjct: 265 DLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIF 324
Query: 198 ---------------------------VSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
VSW+SMI + NG EAL++F MQ +KP
Sbjct: 325 GLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKP 384
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
T+ +L AC ++ AL G A F R ++ +G+ LIDMYAKCGR+ + F
Sbjct: 385 NSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICF 444
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+ K+ V WNAV++G +M+G K A +F +++ G +P+ +F +L C+ +GL +
Sbjct: 445 DGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTE 504
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
EG +FNSMS + + +EHY CMV LL R+G+L++A+ +I+ MP+ P+A VWGALL+
Sbjct: 505 EGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSS 564
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CR+H L E +L LEP N GNY+LLSNIY++ WN+ ++R MM +KG++K
Sbjct: 565 CRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNP 624
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
GCSW+EV VH L GD SHP +I KLD+L+ ++K G+ P + VL D+EE++K+
Sbjct: 625 GCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKE 684
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L HSEKLA+ FGL+ T P +++ KNLR+CGDCH IK IS REI VRD NRF
Sbjct: 685 QILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRF 744
Query: 591 HCFIEGSCSCKDFW 604
H F EG+CSC D+W
Sbjct: 745 HHFKEGACSCGDYW 758
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 200/444 (45%), Gaps = 70/444 (15%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
++H+ I+K GL D + T LL+ Y + ADA V D +P+ NV S++ +I +
Sbjct: 34 QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFH 93
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
A++ F ++L RGL PD+ + + AC L L A+ +HG + +G + FV +
Sbjct: 94 QFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQS 153
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS---------------------------- 202
SLV +Y KC + A RVFD+M E D+VSWS+
Sbjct: 154 SLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQP 213
Query: 203 -------MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
MI G+ +G EA+ MF +M +P+ T+ VL A L L +G+
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
++ + +S+ + + LIDMY KC ++ +VF +M D NA + GLS NG V+
Sbjct: 274 GYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM---------------- 359
+ +F QL+ G++ N ++ ++ C+ G E + F M
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLL 393
Query: 360 --------------SRVFSLTPMIE---HYG-CMVDLLGRSGQLDEAHELIKSMPMEPNA 401
+ FSL I + G ++D+ + G++ + +P + N
Sbjct: 394 PACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTK-NL 452
Query: 402 IVWGALLAGCRLHKKTDLAEHVLN 425
+ W A++AG +H K A + +
Sbjct: 453 VCWNAVIAGYAMHGKAKEAMEIFD 476
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%)
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
LS + H ++ + G + +AT L+ YA A V D +PE ++ S+S++I
Sbjct: 27 ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
++ AL F M L P+ + + ACA L AL+ + F
Sbjct: 87 YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
S+ + ++L+ MY KC ++ A +VF M + D V W+A+V+ + G V A +F ++
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
G+QPN ++ G++ G H+GL E F M
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 270/698 (38%), Positives = 379/698 (54%), Gaps = 95/698 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACA-REHDFQLGVRSHSLIVKA 59
M++G++ + AI Y M N+T+P + ++C+ R +F G ++K
Sbjct: 97 MMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFD-GKCIQDHVLKV 155
Query: 60 GLDCDEFVKTSLLNL-------------------------------YVHCGYLADALKVF 88
G D D +++ +L+N+ YV G + +A V+
Sbjct: 156 GFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVY 215
Query: 89 DDIPDKNV-------------------------------VSWTAIISGYINEGNLEEAIN 117
D +P++NV VSW+A+IS Y EEA+
Sbjct: 216 DRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALI 275
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+F+ + G+ D ++ VL+AC++L + T K +HG V + G V + +L+ +Y+
Sbjct: 276 LFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYS 335
Query: 178 -------------------------------KCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
KCG +EKAR +FD MP+KD VSWS+MI G
Sbjct: 336 SCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISG 395
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
YA E L +F MQ E KP+ +V V+SAC L AL+ G W +++ +N N
Sbjct: 396 YAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKIN 455
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
+LGTTLI+MY K G + A +VF+ +++K WNA++ GL+MNG V + F ++++
Sbjct: 456 IILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKE 515
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLD 386
G+ PN TFV +L C H GLVDEG + FNSM + + P I+HYGCMVDLLGR+G L
Sbjct: 516 HGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLK 575
Query: 387 EAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYS 446
EA ELI+SMPM P+ WGALL C+ + + E + +L+ L P + G VLLSNIY+
Sbjct: 576 EAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYA 635
Query: 447 ASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELAT 506
+ W D ++R MM G+ K GCS +E G VHEFL GD +HP +E I LDE+A
Sbjct: 636 SKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAK 695
Query: 507 KLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
KLK G+ P T V DI+EEEK+ L HSEKLA+AFGLI P IRI KNLR+C D
Sbjct: 696 KLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICND 755
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CH A KLISK REI+VRD +RFH F +GSCSC D+W
Sbjct: 756 CHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 194/459 (42%), Gaps = 81/459 (17%)
Query: 27 LPTNFTFPFV---LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLA- 82
L T P + L+ C F + S ++ +G D F + LL ++
Sbjct: 20 LKPTLTLPILETHLQKCQNIKQFN---QILSQMILSGFFKDSFAASRLLKFSTELPFINI 76
Query: 83 -DALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
+ ++F I + N ++ GY+ + +AI +++ +L + D+++ + +C
Sbjct: 77 NQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSC 136
Query: 142 T-QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
+ +L + K I +V + G +V++ +L+++YA CGN+ AR+VFD D+VSW
Sbjct: 137 SIRLAEFD-GKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSW 195
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+SM+ GY G +EA D++ M ER
Sbjct: 196 NSMLAGYVLVGNVEEAKDVYDRMP----------------------------------ER 221
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
N SN ++I ++ K G + +ACK+F EMK KD V W+A++S N + A +
Sbjct: 222 NVIASN-----SMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALIL 276
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR----------------------QFFNS 358
F ++ GI + + +L C+ +V G+ ++S
Sbjct: 277 FKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSS 336
Query: 359 MSRVFSLTPMIEHYGC--------MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
V + + C M+ + G++++A L SMP + N + W A+++G
Sbjct: 337 CEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDN-VSWSAMISG 395
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+ VL Q + +E +L+S I + +H
Sbjct: 396 YAQQDRFT-ETLVLFQEMQIEGTKPDETILVSVISACTH 433
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/605 (40%), Positives = 362/605 (59%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ N + A+ M+ E G P T VL ACA H+ V+
Sbjct: 297 LVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRG 356
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D V T++L++Y CG + A KVFD + D+N VSW A+I GY G+ EA+ +F
Sbjct: 357 GFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALF 416
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+R++ G+ S++ L AC +LG L + +H + G NV V +L+ +Y KC
Sbjct: 417 KRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKC 476
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ A +VFD++ K VSW++MI G NG ++A+ +F MQ EN+KP+ +T+V ++
Sbjct: 477 KRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSII 536
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A A + W + R + + T LIDMYAKCGR++ A +F +D+ +
Sbjct: 537 PALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVI 596
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ G +G KVA +F +++ G PN TF+ +L C+HAGLVDEG+++F+SM
Sbjct: 597 TWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSM 656
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ L P +EHYG MVDLLGR+G+L EA I+ MPMEP V+GA+L C+LHK +L
Sbjct: 657 KEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVEL 716
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE ++ LEP +VLL+NIY+ + W D A++R+ M KG+QK G S V++
Sbjct: 717 AEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKN 776
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F G +H ++ IY++L +L ++KA G+VP TD + D+E++ K L HSEK
Sbjct: 777 EIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEK 835
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GLI TAP I+I KNLRVC DCH A KLIS +TGREII+RD RFH F +G CS
Sbjct: 836 LAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCS 895
Query: 600 CKDFW 604
C D+W
Sbjct: 896 CGDYW 900
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 211/428 (49%), Gaps = 4/428 (0%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+R S + A+ + +M G P TF +LK CA D G H+ + G
Sbjct: 196 LRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARG 255
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + T+L N+Y C DA +VFD +P ++ V+W A+++GY G E A+ M
Sbjct: 256 LSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVV 315
Query: 121 RLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ G +PD+ ++V VL AC L + +H + G V V+T+++D+Y KC
Sbjct: 316 RMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKC 375
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ AR+VFD M +++ VSW++MI+GYA NG EAL +F M E + +++ L
Sbjct: 376 GAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAAL 435
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC LG L+ G + R SN + LI MY KC R A +VF E+ K +V
Sbjct: 436 HACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRV 495
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ G + NG + A +F +++ ++P+ T V ++ + R + +
Sbjct: 496 SWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQAR-WIHGY 554
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
S L + ++D+ + G++ A L S + + I W A++ G H +
Sbjct: 555 SIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNS-ARDRHVITWNAMIHGYGSHGSGKV 613
Query: 420 AEHVLNQL 427
A + ++
Sbjct: 614 AVELFEEM 621
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 160/320 (50%), Gaps = 4/320 (1%)
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G P + +L C DL+T + +H + G AT+L ++YAKC A
Sbjct: 220 GSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDA 279
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACAS 244
RRVFD+MP +D V+W++++ GYA NG + A+ M MQ E+ +P+ T+V VL ACA
Sbjct: 280 RRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACAD 339
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
AL +F R F + T ++D+Y KCG + A KVF M+D++ V WNA+
Sbjct: 340 AQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAM 399
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
+ G + NG A +F ++ G+ + + L C G +DEGR+ + R+
Sbjct: 400 IKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRI-G 458
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
L + ++ + + + D A ++ + + + W A++ GC + ++ A +
Sbjct: 459 LESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTR-VSWNAMILGCTQNGSSEDAVRLF 517
Query: 425 NQLIALEPWNSGNYVLLSNI 444
+++ LE ++ L+S I
Sbjct: 518 SRM-QLENVKPDSFTLVSII 536
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/605 (40%), Positives = 360/605 (59%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N F AI + MR G +PT F F ++ACA ++G + H L +K G
Sbjct: 77 MISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFG 136
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV ++L ++Y CG + DA KVF+++P K+ VSWTA+I GY G EEA+ F+
Sbjct: 137 IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFK 196
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ + D + L AC L + +H V + G ++FV +L D+Y+K G
Sbjct: 197 KMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAG 256
Query: 181 NMEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ME A VF E +++VS++ +I GY ++ L +F ++R+ ++P +T ++
Sbjct: 257 DMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLI 316
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACA+ ALE G + + + F +P + + L+DMY KCG + A + F E+ D ++
Sbjct: 317 KACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEI 376
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN++VS +G K A F ++ G++PN TF+ LL GC+HAGLV+EG +F SM
Sbjct: 377 AWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSM 436
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + + P EHY C++DLLGR+G+L EA E I MP EPNA W + L CR+H ++
Sbjct: 437 DKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEM 496
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ +L+ LEP NSG VLLSNIY+ +W D +R M D ++K+ G SWV+V
Sbjct: 497 GKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGY 556
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
H F D SH IY KLD L ++KAAG+VP TD V D+++ K+ L HSE+
Sbjct: 557 KTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSER 616
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
+A+AF LI+ I + KNLRVC DCH AIK ISK+TGR+IIVRDN+RFH F +GSCS
Sbjct: 617 IAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCS 676
Query: 600 CKDFW 604
C D+W
Sbjct: 677 CGDYW 681
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 197/376 (52%), Gaps = 5/376 (1%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
V++ A+ + G + H+L++ AG F+ L+N+Y CG L ALK+FD +P +N
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+VSWTA+ISG EAI F + G P F+ + AC LG + K +H
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ G G +FV ++L D+Y+KCG M A +VF++MP KD VSW++MI GY+ G +E
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL F M E + + + + L AC +L A + G S + + F S+ +G L D
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250
Query: 276 MYAKCGRMAQACKVFR-EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
MY+K G M A VF + + ++ V + ++ G ++ VF +L + GI+PN
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
TF L+ C + +++G Q + ++ F P + +VD+ G+ G L+ A +
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEHAIQAFD 368
Query: 394 SMPMEPNAIVWGALLA 409
+ +P I W +L++
Sbjct: 369 EIG-DPTEIAWNSLVS 383
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 165/372 (44%), Gaps = 41/372 (11%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
D+ ++ V+ + L K +H + AG F+ LV++Y+KCG ++ A ++F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D MP++++VSW++MI G + N EA+ F M+ P + + ACASLG++E
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
+G + S +G+ L DMY+KCG M ACKVF EM KD+V W A++ G S
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM------SRVF 363
G + A F ++ + + + L C GR +S+ S +F
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243
Query: 364 ---SLTPM----------------------IEHYGCMVDLLGRSGQLDEAHEL---IKSM 395
+LT M + Y C++D + Q+++ + ++
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303
Query: 396 PMEPNAIVWGALLAGC----RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKW 451
+EPN + +L+ C L + T L V+ +P+ S +L ++Y
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSS---ILVDMYGKCGLL 360
Query: 452 NDAAKIRSMMGD 463
A + +GD
Sbjct: 361 EHAIQAFDEIGD 372
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/608 (40%), Positives = 370/608 (60%), Gaps = 4/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G N A+ + M EG T VL C D L + H VK G
Sbjct: 141 MLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHG 200
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + FV +++++Y G L + KVFD + +++V+W +IISG+ G + A+ MF
Sbjct: 201 LDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFC 260
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-KGRNVFVATSLVDLYAKC 179
+ G+ PD +++ + +A Q GD+ + +H Y+ G ++ ++VD+YAK
Sbjct: 261 GMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKL 320
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGV 238
+E A+R+FD MP +D VSW+++I GY NG EA+ ++ +MQ+ E LKP T V V
Sbjct: 321 SKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSV 380
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L A + LGAL+ G + + + +GT +ID+YAKCG++ +A +F + +
Sbjct: 381 LPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRST 440
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WNAV+SG+ ++G+ A +F Q+++ GI P+ TFV LL C+HAGLVD+GR FFN
Sbjct: 441 GPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNM 500
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + + P+ +HY CMVD+ GR+GQLD+A + I++MP++P++ +WGALL CR+H +
Sbjct: 501 MQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVE 560
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
+ + L L+P N G YVL+SN+Y+ KW+ ++RS++ + +QK G S +EV
Sbjct: 561 MGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVK 620
Query: 479 GVVHEFLVGD--NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
V+ F G+ N HP E+I +L +L K+++ G+VP VL D+EE+EK+ L H
Sbjct: 621 RSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNH 680
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SE+LA+AFG+I T P+ + I KNLRVCGDCH A K ISKIT REIIVRD+NRFH F +G
Sbjct: 681 SERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDG 740
Query: 597 SCSCKDFW 604
CSC DFW
Sbjct: 741 YCSCGDFW 748
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 211/400 (52%), Gaps = 8/400 (2%)
Query: 31 FTFPFVLKACAREHDFQLGVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALKVFD 89
FTFP +L+A + H+ ++ GL D F +L++ Y+ G + DA + FD
Sbjct: 72 FTFPPLLRAAQGP---GTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFD 128
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
++ ++V +W A++SG EA+ +F R++ G+ D+ ++ VL C LGD +
Sbjct: 129 EMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRAL 188
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
A +H Y + G +FV +++D+Y K G +E+ R+VFD M +D+V+W+S+I G+
Sbjct: 189 ALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQ 248
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF-LSNPV 268
G A++MF M+ + P+ T++ + SA A G + G +M R + + + +
Sbjct: 249 GGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDII 308
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC- 327
G ++DMYAK ++ A ++F M +D V WN +++G NG A V+ ++K
Sbjct: 309 AGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHE 368
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++P TFV +L +H G + +G + +++S L + C++DL + G+LDE
Sbjct: 369 GLKPIQGTFVSVLPAYSHLGALQQGTR-MHALSIKTGLNLDVYVGTCVIDLYAKCGKLDE 427
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
A L + P W A+++G +H A + +Q+
Sbjct: 428 AMLLFEQTPRRSTG-PWNAVISGVGVHGHGAKALSLFSQM 466
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/607 (41%), Positives = 374/607 (61%), Gaps = 4/607 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF N A+ + M+ E T +L CA+ +D GV H ++K G
Sbjct: 219 MISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHG 278
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV +L+N+Y G L DA +VFD + +++VSW +II+ Y + A+ F+
Sbjct: 279 LESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFK 338
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR-NVFVATSLVDLYAKC 179
+L G++PD ++V + + QL D + +HG+V ++ + +LV++YAK
Sbjct: 339 EMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKL 398
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVG 237
G+++ AR VF+Q+P +D++SW+++I GYA NG EA+D YNM E + P T V
Sbjct: 399 GSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDA-YNMMEEGRTIVPNQGTWVS 457
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+L A + +GAL+ G+ + +N + + T LIDMY KCGR+ A +F E+ +
Sbjct: 458 ILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQET 517
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WNA++S L ++G+ + A +F + G++ + TFV LL C+H+GLVDE + F+
Sbjct: 518 SVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFD 577
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
+M + + + P ++HYGCMVDL GR+G L++A+ L+ +MP++ +A +WG LLA CR+H
Sbjct: 578 TMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNA 637
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
+L ++L+ ++ N G YVLLSNIY+ KW A K+RS+ D+G++K G S V V
Sbjct: 638 ELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVV 697
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
VV F G+ SHP +IY +L L K+K+ G+VP VL D+EE+EK+ L HS
Sbjct: 698 GSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHS 757
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
E+LA+ FG+I+T PK IRI KNLRVCGDCH A K ISKIT REIIVRD+NRFH F +G
Sbjct: 758 ERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGI 817
Query: 598 CSCKDFW 604
CSC D+W
Sbjct: 818 CSCGDYW 824
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 230/438 (52%), Gaps = 20/438 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+ +V ++ +++ + + G P +TFP VLKAC D G + H ++K
Sbjct: 120 MVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKM 176
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G + D +V SL++LY G + A KVF D+P ++V SW A+ISG+ GN+ EA+ +
Sbjct: 177 GFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVL 236
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ +K D+ ++ +L C Q D+ +H YV + G +VFV+ +L+++Y+K
Sbjct: 237 DRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKF 296
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ A+RVFD M +D+VSW+S+I Y N P AL F M ++P+ T+V +
Sbjct: 297 GRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLA 356
Query: 240 SACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
S L +G F+ R +L + V+G L++MYAK G + A VF ++ +D
Sbjct: 357 SIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDV 416
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+ WN +++G + NG A + +E+ I PN T+V +L +H G + +G +
Sbjct: 417 ISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHG 476
Query: 358 SMSR------VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ + VF T C++D+ G+ G+L++A L +P E ++ W A+++
Sbjct: 477 RLIKNCLFLDVFVAT-------CLIDMYGKCGRLEDAMSLFYEIPQE-TSVPWNAIISSL 528
Query: 412 RLHKKTDLAEHVLNQLIA 429
+H + A + + A
Sbjct: 529 GIHGHGEKALQLFKDMRA 546
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 216/453 (47%), Gaps = 27/453 (5%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
F V ++C + + + H+L++ G D + T L+ LY G L+ + F I
Sbjct: 54 FNLVFRSCT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAK 151
KN+ SW +++S Y+ G ++++ LL G++PD ++ VL AC L D +
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GE 167
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+H +V + G +V+VA SL+ LY++ G +E A +VF MP +D+ SW++MI G+ NG
Sbjct: 168 KMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNG 227
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
EAL + M+ E +K + T+ +L CA + GV ++ ++ S+ +
Sbjct: 228 NVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSN 287
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
LI+MY+K GR+ A +VF M+ +D V WN++++ N A G F ++ G++P
Sbjct: 288 ALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRP 347
Query: 332 NGNTFVGLLCGCTHAGLVDE--GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+ T V L L D GR + R L I +V++ + G +D A
Sbjct: 348 DLLTVVSL--ASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCAR 405
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW-----NSGNYVLLSNI 444
+ + +P + I W L+ G + + LA ++ +E N G +V +
Sbjct: 406 AVFEQLPSR-DVISWNTLITG---YAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPA 461
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
YS KI + I+ C +++V
Sbjct: 462 YSHVGALQQGMKIHGRL-------IKNCLFLDV 487
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 167/358 (46%), Gaps = 30/358 (8%)
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
V +CT +++ AK +H + GK ++V + T LV LYA G++ + F + K+
Sbjct: 57 VFRSCT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYN-MQRENLKPEYYTMVGVLSACASLGALE-LGVWA 254
I SW+SM+ Y G ++++D + ++P++YT VL AC SL E + W
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCW- 172
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
+ + F + + +LI +Y++ G + A KVF +M +D WNA++SG NG V
Sbjct: 173 ---VLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNV 229
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH--- 371
A V +++ ++ + T +L C + V G + ++ + +E
Sbjct: 230 AEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGG-----VLVHLYVIKHGLESDVF 284
Query: 372 -YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL--I 428
++++ + G+L +A + M + + + W +++A + A ++ +
Sbjct: 285 VSNALINMYSKFGRLQDAQRVFDGMEVR-DLVSWNSIIAAYEQNDDPVTALGFFKEMLFV 343
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLV 486
+ P + + + ++ S + +D R++ G + C W+EVD V+ LV
Sbjct: 344 GMRP----DLLTVVSLASIFGQLSDRRIGRAVHG-----FVVRCRWLEVDIVIGNALV 392
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/600 (42%), Positives = 372/600 (62%), Gaps = 9/600 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ ++SMR PT +FP +KAC+ D G ++H G D FV ++L+
Sbjct: 60 ALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIV 119
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL------HRGL 127
+Y CG L DA KVFD+IP +++VSWT++I GY GN +A+++F+ LL +
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN--MEKA 185
DS +V V++AC+++ + IH +V + G R V V +L+D YAK G + A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP-EYYTMVGVLSACAS 244
R++FDQ+ +KD VS++S++ YA +G EA ++F + + + T+ VL A +
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
GAL +G + R + ++GT++IDMY KCGR+ A K F MK+K+ W A+
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM 359
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
++G M+G+ A +F + G++PN TFV +L C+HAGL EG ++FN+M F
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ P +EHYGCMVDLLGR+G L +A++LI+ M M+P++I+W +LLA CR+HK +LAE +
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISV 479
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+L L+ N G Y+LLS+IY+ + +W D ++R +M ++G+ K G S +E++G VH F
Sbjct: 480 ARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVF 539
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
L+GD HP EKIY L EL KL AG+V T V D++EEEK+ L HSEKLA+AF
Sbjct: 540 LIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAF 599
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
G++ T P + + KNLRVC DCH IKLISKI RE +VRD RFH F +G CSC D+W
Sbjct: 600 GIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 200/393 (50%), Gaps = 27/393 (6%)
Query: 87 VFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+F+ DK +V SW ++I+ G+ EA+ F + L P S + AC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D+ + K H G ++FV+++L+ +Y+ CG +E AR+VFD++P++DIVSW+SMI+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIR 150
Query: 206 GYASNGFPKEALDMFYNM------QRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
GY NG +A+ +F ++ + + + +V V+SAC+ + A L SF+
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 260 RNEFLSNPVLGTTLIDMYAKCGR--MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ F +G TL+D YAK G +A A K+F ++ DKD+V +N+++S + +G A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 318 FGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
F VF +L K + N T +L +H+G + G+ + + R+ L + ++
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSII 329
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWN 434
D+ + G+++ A + M N W A++AG +H A + +I + P
Sbjct: 330 DMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP-- 386
Query: 435 SGNYVLLSNIYSA-SH--------KWNDAAKIR 458
NY+ ++ +A SH +W +A K R
Sbjct: 387 --NYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/553 (44%), Positives = 350/553 (63%), Gaps = 3/553 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ +V G D + LL Y + DA +FD + ++ +W+ ++ G+ G+
Sbjct: 23 HAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDH 82
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
FR LL G+ PD++++ V+ C DL + IH V + G + FV SL
Sbjct: 83 AGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASL 142
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS-NGFPKEALDMFYNMQRENLKPE 231
VD+YAKC +E A+R+F++M KD+V+W+ MI YA N + E+L +F M+ E + P+
Sbjct: 143 VDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAY--ESLVLFDRMREEGVVPD 200
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
MV V++ACA LGA+ +A+ ++ RN F + +LGT +IDMYAKCG + A +VF
Sbjct: 201 KVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFD 260
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
MK+K+ + W+A+++ +G K A +F + C I PN TFV LL C+HAGL++E
Sbjct: 261 RMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEE 320
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G +FFNSM ++ P ++HY CMVDLLGR+G+LDEA LI++M +E + +W ALL C
Sbjct: 321 GLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGAC 380
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
R+H K +LAE N L+ L+P N G+YVLLSNIY+ + KW AK R MM + ++KI G
Sbjct: 381 RIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPG 440
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
+W+EVD ++F VGD SHP S++IY L L KL+ AG+VP TD VL D+EEE KQ
Sbjct: 441 WTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQE 500
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L HSEKLA+AFGLI + IRI+KNLRVCGDCH K++S I R IIVRD NRFH
Sbjct: 501 MLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRFH 560
Query: 592 CFIEGSCSCKDFW 604
F +G+CSC D+W
Sbjct: 561 HFNDGTCSCGDYW 573
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 178/295 (60%), Gaps = 3/295 (1%)
Query: 25 GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA 84
G P N+T PFV++ C D Q+G H +++K GL D FV SL+++Y C + DA
Sbjct: 96 GVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDA 155
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
++F+ + K++V+WT +I Y + N E++ +F R+ G+ PD ++V V+ AC +L
Sbjct: 156 QRLFERMLSKDLVTWTVMIGAY-ADCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKL 214
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
G + A++ + Y+ G +V + T+++D+YAKCG++E AR VFD+M EK+++SWS+MI
Sbjct: 215 GAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMI 274
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV-WASSFMERNEF 263
Y +G K+A+D+F+ M + P T V +L AC+ G +E G+ + +S E +
Sbjct: 275 AAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAV 334
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
+ T ++D+ + GR+ +A ++ M +KD+ +W+A++ ++ +++A
Sbjct: 335 RPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELA 389
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 143/303 (47%), Gaps = 12/303 (3%)
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ +H +V G +++ +A L+ YA+ ++ A +FD + +D +WS M+ G+A
Sbjct: 20 RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G F + R + P+ YT+ V+ C L++G + ++ LS+ +
Sbjct: 80 GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS-MNGYVKVAFGVFGQLEKCGI 329
+L+DMYAKC + A ++F M KD V W ++ + N Y + +F ++ + G+
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLV--LFDRMREEGV 197
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEA 388
P+ V ++ C G + R + + R FSL ++ M+D+ + G ++ A
Sbjct: 198 VPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILG--TAMIDMYAKCGSVESA 255
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYVLLSNIYS 446
E+ M E N I W A++A H + A + + ++ A+ P +S +Y+
Sbjct: 256 REVFDRMK-EKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILP---NRVTFVSLLYA 311
Query: 447 ASH 449
SH
Sbjct: 312 CSH 314
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 157/319 (49%), Gaps = 13/319 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + ++ ++ ++ MR EG +P V+ ACA+ ++ IV+ G
Sbjct: 173 MIGAYADCNAYE-SLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNG 231
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + T+++++Y CG + A +VFD + +KNV+SW+A+I+ Y G ++AI++F
Sbjct: 232 FSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFH 291
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L + P+ + V +L AC+ G + ++ + E +V T +VDL +
Sbjct: 292 MMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRA 351
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPEYYTM 235
G +++A R+ + M EKD WS+++ ++ ++A + +Q +N P +Y +
Sbjct: 352 GRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQN--PGHYVL 409
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+ + A A G E M + + P G T I++ K + + + + K+
Sbjct: 410 LSNIYAKA--GKWEKVAKFRDMMTQRKLKKIP--GWTWIEVDNKTYQFSVGDRSHPQSKE 465
Query: 296 KDQVVWNAVVSGLSMNGYV 314
+++ +++ L M GYV
Sbjct: 466 IYEMLM-SLIKKLEMAGYV 483
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/605 (40%), Positives = 363/605 (60%), Gaps = 4/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPF-VLKACAREHDFQLGVRSHSLIVKA 59
MI G+ N+ + +I+ + + NE + T +L A A + +LG++ HSL K
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G ++V T ++LY CG + A +F + ++V++ A+I GY + G E ++++F
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ L+ G K S ++V ++ G L IHGY ++ + V+T+L +Y+K
Sbjct: 311 KELMLSGAKLKSSTLVSLVPVS---GHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKL 367
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+E AR++FD+ PEK + SW++MI GY NG ++A+ +F MQ P T+ +L
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCIL 427
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACA LGAL LG W + +F S+ + T LI MYAKCG +A+A ++F M K++V
Sbjct: 428 SACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEV 487
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN ++SG ++G+ + A +F ++ GI P TF+ +L C+HAGLV EG + FNSM
Sbjct: 488 TWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ P ++HY C+VD+LGR+G L A + I++MP++P VW LL CR+HK T+L
Sbjct: 548 IHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNL 607
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A V +L L+P N G +VLLSNI+SA + AA +R + + K G + +E+
Sbjct: 608 ARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGE 667
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
H F GD SHP + I+ KL++L K++ AG+ P T+ L D+EEEE++ + HSE+
Sbjct: 668 TPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSER 727
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI T P IRI KNLRVC DCH A KLISKIT R I+VRD NRFH F +G CS
Sbjct: 728 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCS 787
Query: 600 CKDFW 604
C D+W
Sbjct: 788 CGDYW 792
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 217/455 (47%), Gaps = 16/455 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++RGF N+ ++ + +R L P + T+ F + A + D + G H +
Sbjct: 89 LMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVD 148
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D + + ++++ +Y + DA KVFD +P+K+ + W +ISGY E+I +F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 120 RRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
R L++ + D+ +++ +L A +L +L IH + G + +V T + LY+K
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSK 268
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG ++ A +F + DIV++++MI GY SNG + +L +F + K + T+V +
Sbjct: 269 CGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSL 328
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+ G L L + ++ FLS+ + T L +Y+K + A K+F E +K
Sbjct: 329 VPVS---GHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WNA++SG + NG + A +F +++ PN T +L C G + G+ + +
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGK-WVHD 444
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH---- 414
+ R I ++ + + G + EA L MP + N + W +++G LH
Sbjct: 445 LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMP-KKNEVTWNTMISGYGLHGHGQ 503
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+ + +LN IA P L +Y+ SH
Sbjct: 504 EALTIFSEMLNSGIAPTP-----VTFLCVLYACSH 533
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 173/365 (47%), Gaps = 13/365 (3%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
++H+ IV G D + T L G + A +F + +V + ++ G+
Sbjct: 38 QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 111 NLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+ ++ +F L LKP+S + ++A + D IHG G + +
Sbjct: 98 SPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLG 157
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-L 228
+++V +Y K +E AR+VFD+MPEKD + W++MI GY N E++ +F ++ E+
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+ + T++ +L A A L L LG+ S + S+ + T I +Y+KCG++ A
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMAST 277
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+FRE + D V +NA++ G + NG +++ +F +L G + +T V L+ H L
Sbjct: 278 LFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLML 337
Query: 349 VDEGRQF---FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
+ + N +S T + Y + ++ DE+ E KS+P W
Sbjct: 338 IYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPE--KSLPS------WN 389
Query: 406 ALLAG 410
A+++G
Sbjct: 390 AMISG 394
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/605 (40%), Positives = 375/605 (61%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+V CF A + + M G P+ T +++AC + +LG H ++ G
Sbjct: 202 IIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLG 261
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D V TS +++Y G + A VF +P +N+VSW A+ISG + G + E+ ++F
Sbjct: 262 LGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFH 321
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RL+ D +IV +L C+Q L+T K +HG + + N+ ++T++VDLY+KCG
Sbjct: 322 RLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFES-NLILSTAIVDLYSKCG 380
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++++A VF++M ++++++W++M+ G A NG ++AL +F MQ E + T V ++
Sbjct: 381 SLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVH 440
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQV 299
+CA LG+L+ G + R F + V T L+DMYAKCG++ A ++F KD V
Sbjct: 441 SCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVV 500
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+WN++++G M+G+ A G++ ++ + G++PN TF+ LL C+H+ LV++G FNSM
Sbjct: 501 LWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSM 560
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R ++ P+ +HY C+VDLL R+G+ +EA LI+ MP +P V ALL+GCR HK +L
Sbjct: 561 ERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINL 620
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
++L+AL+ N G Y++LSNIY+ + +W+ IR +M ++G++K G S VE
Sbjct: 621 GIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGN 680
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F GDNSHP E+IY L+ L + ++ +G+VP T VL D++EE K L HSE+
Sbjct: 681 WVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSER 740
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL+TT +IRI KNLRVCGDCH K ISKI REIIVRD NRFH F G CS
Sbjct: 741 LAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECS 800
Query: 600 CKDFW 604
C D+W
Sbjct: 801 CGDYW 805
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/474 (30%), Positives = 257/474 (54%), Gaps = 10/474 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G++ + ++ +E + MR+ + + F LKACA D+++G+ S V+ G
Sbjct: 101 MLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKG 160
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ + FV +S+++ V G + +A +VFD +P+K+VV W +II GY+ G + A +F
Sbjct: 161 MEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFF 220
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+KP ++ ++ AC +G+L K +HGYV G G ++ V TS VD+Y+K G
Sbjct: 221 EMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMG 280
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E AR VF +MP +++VSW++MI G NG E+ D+F+ + R + + T+V +L
Sbjct: 281 DIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQ 340
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C+ +L G R+ F SN +L T ++D+Y+KCG + QA VF MKD++ +
Sbjct: 341 GCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVIT 399
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ GL+ NG+ + A +F Q+++ GI N TFV L+ C H G + GR +
Sbjct: 400 WTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLF 459
Query: 361 RV---FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
R+ F + M +VD+ + G+++ A + + + ++W +++ G +H
Sbjct: 460 RLGFAFDIVNMT----ALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHG 515
Query: 418 DLAEHVLNQLI--ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKI 469
A + +++I L+P + LLS + + SM D I+ I
Sbjct: 516 YQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPI 569
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 188/398 (47%), Gaps = 4/398 (1%)
Query: 52 SHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGN 111
+H+ I+ L D+FV T L+ Y L A VFD + A++ GY+ G
Sbjct: 51 THAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGR 110
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
E + +F + R L+ DS S L AC D I E G +N FV +S
Sbjct: 111 YRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSS 170
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
++ K G + +A+RVFD MP KD+V W+S+I GY G A +F+ M +KP
Sbjct: 171 MISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPS 230
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
TM ++ AC +G L+LG ++ ++ ++ T+ +DMY+K G + A VF
Sbjct: 231 PITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFY 290
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
+M ++ V WNA++SG NG V +F +F +L + + T V LL GC+ +
Sbjct: 291 KMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLAT 350
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G+ R F ++ +VDL + G L +A + M + N I W A+L G
Sbjct: 351 GKILHGCAIRSFESNLILS--TAIVDLYSKCGSLKQATFVFNRMK-DRNVITWTAMLVGL 407
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+ + A + Q+ E + + +S ++S +H
Sbjct: 408 AQNGHAEDALRLFAQMQE-EGIAANSVTFVSLVHSCAH 444
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 2/266 (0%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
+L K H + + FVAT LV Y+ ++E AR VFDQ + + ++M+
Sbjct: 44 NLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLC 103
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GY +G +E L++F M+ NL+ + + L ACAS E+G+ S
Sbjct: 104 GYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEK 163
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
N +G+++I K G++ +A +VF M +KD V WN+++ G G VAF +F ++
Sbjct: 164 NRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMH 223
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
GI+P+ T L+ C G + G+ + + L I VD+ + G +
Sbjct: 224 GSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGL-GLGNDILVLTSFVDMYSKMGDI 282
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGC 411
+ A + MP N + W A+++GC
Sbjct: 283 ESARWVFYKMPTR-NLVSWNAMISGC 307
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/640 (37%), Positives = 366/640 (57%), Gaps = 36/640 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+ + A E Y M G P TF +L +C G R HS I + G
Sbjct: 229 IIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERG 288
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG-----NLEEA 115
L+ D V +L+ +Y C + +A ++FD + ++V+SW+A+I+GY G +++E
Sbjct: 289 LETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEV 348
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-------------- 161
+ R+ G+ P+ + + +L ACT G L + IH +++ G
Sbjct: 349 FQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNM 408
Query: 162 -----------------KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
+NV TS + +Y KCG++ A +VF +MP +++VSW+ MI
Sbjct: 409 YAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMI 468
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GYA NG + ++ +M+ E +P+ T++ +L AC +L LE G + +
Sbjct: 469 AGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLE 528
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
S+ V+ T+LI MY+KCG++A+A VF +M ++D V WNA+++G +G A +F ++
Sbjct: 529 SDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRM 588
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
K + PN T ++ C+ AGLV EGR+ F M F +TP +HYGCMVDLLGR+G+
Sbjct: 589 LKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGR 648
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
L EA E I+SMP EP+ VW ALL C+ H LAE + ++ LEP + Y+ LSNI
Sbjct: 649 LQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNI 708
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+ + +W+D+ K+R +M D+G++K RG S +E+DG +H F+ D +HP + I+++L+ L
Sbjct: 709 YAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETL 768
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
++K AG+ P VL D+++ +K+ L HSEKLA+A+GL+ T IRI KNLRVC
Sbjct: 769 TKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVC 828
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
GDCH A K ISKI REI+ RD NRFH F G+CSC DFW
Sbjct: 829 GDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 243/487 (49%), Gaps = 48/487 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + N+ A + + M + P TF +LKAC + G + H+++ G
Sbjct: 128 MIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMG 187
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D V T+L+ +Y CG ++ A +VF + ++NVVSWTAII L EA ++
Sbjct: 188 METDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYE 247
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L G+ P++ + V +L +C L+ + IH +++E G ++ VA +L+ +Y KC
Sbjct: 248 QMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCN 307
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP-KEALD----MFYNMQRENLKPEYYTM 235
++++AR +FD+M ++D++SWS+MI GYA +G+ KE++D + M+RE + P T
Sbjct: 308 SVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTF 367
Query: 236 VGVLSACASLGALELG------------------------VWAS--SFMERNEFLS---- 265
+ +L AC + GALE G ++A S E + S
Sbjct: 368 MSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMAN 427
Query: 266 -NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
N V T+ + MY KCG ++ A KVF EM ++ V WN +++G + NG + F + +
Sbjct: 428 KNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSM 487
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ G QP+ T + +L C ++ G+ ++ + L ++ + + GQ
Sbjct: 488 KAEGFQPDRVTVITILEACGALAGLERGK-LVHAEAVKLGLESDTVVATSLIGMYSKCGQ 546
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLH----KKTDLAEHVLNQLIALEPWNSGNYVL 440
+ EA + M + + W A+LAG H + DL + +L + + S N +
Sbjct: 547 VAEARTVFDKMS-NRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERV------SPNEIT 599
Query: 441 LSNIYSA 447
L+ + SA
Sbjct: 600 LTAVISA 606
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 212/405 (52%), Gaps = 9/405 (2%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
+ AI+ ++ G L + T+ V++ CA+ F+ G H + + G++ D ++ S
Sbjct: 37 LREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNS 96
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+N Y +A A +VF + ++VV+W+++I+ Y + +A + F R+ ++P+
Sbjct: 97 LINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPN 156
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ + +L AC L + IH V G +V VAT+L+ +Y+KCG + A VF
Sbjct: 157 RITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFH 216
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M E+++VSW+++IQ A + EA +++ M + + P T V +L++C + AL
Sbjct: 217 KMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNR 276
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G S + ++ ++ LI MY KC + +A ++F M +D + W+A+++G +
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQ 336
Query: 311 NGY-----VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FS 364
+GY + F + ++ + G+ PN TF+ +L CT G +++GRQ +S+V F
Sbjct: 337 SGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFE 396
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
L ++ + ++ + G + EA ++ M N + W + L+
Sbjct: 397 LDRSLQ--TAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFLS 438
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 158/301 (52%), Gaps = 2/301 (0%)
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
G L EAI + + RGL +S + V+ C + K +H ++E G ++++
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
SL++ Y+K ++ A +VF +M +D+V+WSSMI YA N P +A D F M N++
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P T + +L AC + LE G + ++ ++ + T LI MY+KCG ++ AC+V
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEV 214
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F +M +++ V W A++ + + + AF ++ Q+ + GI PN TFV LL C +
Sbjct: 215 FHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEAL 274
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ GR+ + +S T MI ++ + + + EA E+ M + + I W A++A
Sbjct: 275 NRGRRIHSHISERGLETDMIV-ANALITMYCKCNSVQEAREIFDRMS-KRDVISWSAMIA 332
Query: 410 G 410
G
Sbjct: 333 G 333
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 124/259 (47%), Gaps = 5/259 (1%)
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G +EA+ + +++ L T V+ CA E G ++ + LG
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
+LI+ Y+K +A A +VFR M +D V W+++++ + N + AF F ++ I+
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
PN TF+ +L C + ++++GR+ +++ + + + ++ + + G++ A E
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKI-HTIVKAMGMETDVAVATALITMYSKCGEISVACE 213
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYVLLSNIYSAS 448
+ M E N + W A++ H+K + A + Q++ + P N+ +V L N +
Sbjct: 214 VFHKMT-ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISP-NAVTFVSLLNSCNTP 271
Query: 449 HKWNDAAKIRSMMGDKGIQ 467
N +I S + ++G++
Sbjct: 272 EALNRGRRIHSHISERGLE 290
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/625 (40%), Positives = 371/625 (59%), Gaps = 32/625 (5%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ A+ Y M G +P +TFP +LKA AR H+ +VK G+ + V TSL
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+ Y G A A + + V W A+ISG+ EA F + G P
Sbjct: 85 VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTP 144
Query: 132 FSIVRVLTACTQ-LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ V VL+AC + GD+ +HG V +G ++ V +LVD+YA+C +ME A ++FD
Sbjct: 145 VTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFD 204
Query: 191 -------------------------------QMPEKDIVSWSSMIQGYASNGFPKEALDM 219
+MPE+D VSW++MI GY +EAL+M
Sbjct: 205 GMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEM 264
Query: 220 FYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK 279
F MQ N+ + +TMV V++ACA LGALE+G W +M R + +G LIDMY+K
Sbjct: 265 FREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSK 324
Query: 280 CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
CG + +A VF++M +D+ W A++ GL++NGY + A +F ++ P+ TF+G+
Sbjct: 325 CGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGV 384
Query: 340 LCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP 399
L CTHAGLVD+GR+FF SM +++ P + HYGC++DL GR+G++ EA + I MPM P
Sbjct: 385 LTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTP 444
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRS 459
N+ +WG LLA CR+H +++ E V +L+ ++P NS Y LLSNIY+ ++W D ++R
Sbjct: 445 NSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRH 504
Query: 460 MMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDH 519
+ +KGI+K GCS +E++G++HEF+ GD SHP+S++IY KL+ + L G+ P
Sbjct: 505 TIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTE 564
Query: 520 VLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITG 579
V ++ EEEKQ L HSEKLA+AF L+++ P VIRI KNLR+C DCH AIKLIS++ G
Sbjct: 565 VFVEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYG 624
Query: 580 REIIVRDNNRFHCFIEGSCSCKDFW 604
RE++VRD RFH F G CSCKD+W
Sbjct: 625 REVVVRDRTRFHHFRHGFCSCKDYW 649
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 34/282 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V F+ A+E + M+ FT V+ ACA+ ++G + + G
Sbjct: 248 MIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQG 307
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+++Y CG + AL VF D+ ++ +WTAII G G EEAI MF
Sbjct: 308 IKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFH 367
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R++ PD + + VLTACT G + KGR F++
Sbjct: 368 RMIGVSETPDEVTFIGVLTACTHAGLVD-------------KGREFFLSM---------- 404
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
R ++ P ++V + +I + G EALD M + P +L+
Sbjct: 405 -----RETYNIAP--NVVHYGCIIDLFGRAGKITEALDAIDQMP---MTPNSTIWGTLLA 454
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
AC G E+G + + + + N + T L ++YAKC R
Sbjct: 455 ACRVHGNSEIGELVTERLLQMD-PENSTVYTLLSNIYAKCNR 495
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/527 (45%), Positives = 348/527 (66%), Gaps = 3/527 (0%)
Query: 81 LADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVL 138
++ A KVF I NV W +I GY GN A++++R + G ++PD+ + +L
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLL 128
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
A ++ D+ + IH V +G G ++V SL+ LYA CG++ A +VFD+MPEKD+V
Sbjct: 129 KAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+W+S+I G+A NG P+EAL ++ M + +KP+ +T+V +LSACA +GAL LG +M
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYM 248
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ N L+D+YA+CGR+ +A +F EM DK+ V W +++ GL++NG K A
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAI 308
Query: 319 GVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
+F +E K G+ P TFVG+L C+H G+V EG ++F MS + + P IEH+GCMVD
Sbjct: 309 ELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVD 368
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGN 437
LL R+GQ+ +A+E I MPM+PN ++W LL C +H +DLAE +++ LEP +SG+
Sbjct: 369 LLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGD 428
Query: 438 YVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKI 497
YVLLSN+Y++ +W+D KIR M G++K+ G S VEV VHEFL+GD SHP ++ I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMI 488
Query: 498 YSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRI 557
Y+KL E+ +L+ G+VP +V D+EEEEK+ L HSEK+A+AF LI+T + IR+
Sbjct: 489 YAKLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRV 548
Query: 558 AKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNL+VC DCH AIKL+SK+ REI+VRD +RFH F GSCSC+D+W
Sbjct: 549 VKNLKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 204/337 (60%), Gaps = 8/337 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRG+ A+ Y MR GF+ P T+PF+LKA + D +LG HS+++++
Sbjct: 91 LIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRS 150
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G +V+ SLL+LY +CG +A A KVFD +P+K++V+W ++I+G+ G EEA+ ++
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G+KPD F+IV +L+AC ++G L+ K H Y+ + G RN+ + L+DLYA+C
Sbjct: 211 TEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVGV 238
G +E+A+ +FD+M +K+ VSW+S+I G A NG KEA+++F NM+ +E L P T VG+
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGI 330
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-D 295
L AC+ G ++ G M E+ P + ++D+ A+ G++ +A + +M
Sbjct: 331 LYACSHCGMVKEGFEYFRRMS-EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQ 389
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
+ V+W ++ +++G +A +++ ++PN
Sbjct: 390 PNVVIWRTLLGACTVHGDSDLA--ELARMKILQLEPN 424
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/595 (40%), Positives = 365/595 (61%), Gaps = 4/595 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
AI+ + M G+ P FT V+ ACA LG + HS ++ GL D V L+N
Sbjct: 255 AIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLIN 314
Query: 74 LYVHC---GYLADALKVFDDIPDKNVVSWTAIISGYINEGNL-EEAINMFRRLLHRGLKP 129
+Y C G + A K+FD I D NV SWTA+I+GY+ +G EEA+++FR ++ + P
Sbjct: 315 MYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIP 374
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
+ F+ L AC L L + + + + G VA SL+ +YA+ G ++ AR+ F
Sbjct: 375 NHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAF 434
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D + EK+++S++++I YA N +EAL++F ++ + + +T +LS AS+G +
Sbjct: 435 DILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIG 494
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + + ++ N + LI MY++CG + A +VF +M+D++ + W ++++G +
Sbjct: 495 KGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFA 554
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G+ A +F ++ + G++PN T++ +L C+H GLV+EG + F SM + P +
Sbjct: 555 KHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRM 614
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
EHY CMVD+LGRSG L EA + I SMP + +A+VW L CR+H +L +H +I
Sbjct: 615 EHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIE 674
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
EP + Y+LLSN+Y+++ KW++ + IR M +K + K GCSWVEV+ VH+F VGD
Sbjct: 675 QEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDT 734
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
SHP + +IY +L L+ K+K G+VP D VL D+EEE+K+ L HSEK+A+AFGLI+T
Sbjct: 735 SHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLIST 794
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ IR+ KNLR+CGDCH AIK IS TGREIIVRD NRFH +G CSC ++W
Sbjct: 795 SKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 214/422 (50%), Gaps = 12/422 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ F +N+ A+ + M G+ P + F +AC+ +G +VK G
Sbjct: 139 MVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTG 198
Query: 61 -LDCDEFVKTSLLNLYVHC-GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
L D V L++++V G L A KVF+ +P++N V+WT +I+ + G EAI++
Sbjct: 199 YLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDL 258
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++ G +PD F++ V++AC + L + +H G + V L+++YAK
Sbjct: 259 FLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAK 318
Query: 179 C---GNMEKARRVFDQMPEKDIVSWSSMIQGYASN-GFPKEALDMFYNMQRENLKPEYYT 234
C G+M AR++FDQ+ + ++ SW++MI GY G+ +EALD+F M ++ P ++T
Sbjct: 319 CSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFT 378
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
L ACA+L AL +G + + F S + +LI MYA+ GR+ A K F +
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILF 438
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+K+ + +N V+ + N + A +F ++E G+ + TF LL G G + +G Q
Sbjct: 439 EKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQ 498
Query: 355 FFNSMSRVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+RV + C ++ + R G ++ A ++ + M + N I W +++ G
Sbjct: 499 IH---ARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFA 554
Query: 413 LH 414
H
Sbjct: 555 KH 556
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 172/320 (53%), Gaps = 5/320 (1%)
Query: 1 MIRGFVSNDCF-QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+V + + A++ + M +P +FTF LKACA ++G + + VK
Sbjct: 346 MITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKL 405
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G V SL+++Y G + DA K FD + +KN++S+ +I Y N EEA+ +F
Sbjct: 406 GFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G+ +F+ +L+ +G + + IH V ++G N V +L+ +Y++C
Sbjct: 466 NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRC 525
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+E A +VF+ M +++++SW+S+I G+A +GF +AL++F+ M E ++P T + VL
Sbjct: 526 GNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVL 585
Query: 240 SACASLGALELGVWA--SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK- 296
SAC+ +G + G W S + + ++D+ + G +++A + M K
Sbjct: 586 SACSHVGLVNEG-WKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKA 644
Query: 297 DQVVWNAVVSGLSMNGYVKV 316
D +VW + ++G +++
Sbjct: 645 DALVWRTFLGACRVHGNLEL 664
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 209/430 (48%), Gaps = 11/430 (2%)
Query: 6 VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
++N AI M ++G P T+ LK C R F +G H + ++ L D
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDI-PDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
SL++LY CG A +F + ++++SW+A++S + N A+ F ++
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAKC-GNM 182
G P+ + AC+ +S I G+V + G +V V L+D++ K G++
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
A +VF++MPE++ V+W+ MI G+ EA+D+F M +P+ +T+ GV+SAC
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISAC 281
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC---GRMAQACKVFREMKDKDQV 299
A++ L LG S R+ + +G LI+MYAKC G M A K+F ++ D +
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341
Query: 300 VWNAVVSG-LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
W A+++G + GY + A +F + + PN TF L C + + G Q F
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Query: 359 MSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
++ FS + + ++ + RSG++D+A + + E N I + ++ + +
Sbjct: 402 AVKLGFSSVNCVAN--SLISMYARSGRIDDARKAFDIL-FEKNLISYNTVIDAYAKNLNS 458
Query: 418 DLAEHVLNQL 427
+ A + N++
Sbjct: 459 EEALELFNEI 468
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/608 (39%), Positives = 372/608 (61%), Gaps = 4/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHD---FQLGVRSHSLIV 57
MI + N+ AI + + +G P FT VL+AC+ + F LG + H +
Sbjct: 966 MISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAI 1025
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
K G+ D FV T+L++LY G + +A + D ++ SW AI+ GYI +A+
Sbjct: 1026 KCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALE 1085
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
F + G+ D ++ + A L +L K I Y + G +++V++ ++D+Y
Sbjct: 1086 HFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYI 1145
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCG+M A +F ++ D V+W++MI GY NG AL +++ M+ ++P+ YT
Sbjct: 1146 KCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFAT 1205
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
++ A + L ALE G + + + ++ + +GT+L+DMY KCG + A +VFR+M +
Sbjct: 1206 LIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK 1265
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WNA++ GL+ +G+V A +F ++ GIQP+ TF+G+L C+H+GL E ++F+
Sbjct: 1266 VVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFD 1325
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
+M + + +TP IEHY C+VD LGR+G++ EA +I SMP + +A ++ ALL CR
Sbjct: 1326 AMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDA 1385
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
+ A+ V ++L+AL+P +S YVLLSNIY+AS +W+D R+MM K ++K G SW++V
Sbjct: 1386 ETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDV 1445
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAG-FVPTTDHVLFDIEEEEKQYFLACH 536
VH F+V D SHP + IY K+++L +++ G +VP TD L D+EEEEK+ L H
Sbjct: 1446 KNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYH 1505
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEKLA+AFGLI+T P IR+ KNLRVCGDCH AIK ISK+T REI++RD NRFH F G
Sbjct: 1506 SEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNG 1565
Query: 597 SCSCKDFW 604
+CSC D+W
Sbjct: 1566 TCSCGDYW 1573
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 209/414 (50%), Gaps = 13/414 (3%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
AI+ + ++ + T +L A D LG + H+L++K+ V SL+N
Sbjct: 878 AIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMN 937
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE-EAINMFRRLLHRGLKPDSF 132
+Y G + A K F + P+ +++SW +IS Y + NLE EAI FR LL GLKPD F
Sbjct: 938 MYSKAGVVYAAEKTFINSPELDLISWNTMISSYA-QNNLEMEAICTFRDLLRDGLKPDQF 996
Query: 133 SIVRVLTACTQLGD----LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
++ VL AC+ GD + +H Y + G + FV+T+L+DLY+K G M++A +
Sbjct: 997 TLASVLRACST-GDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFL 1055
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
+ D+ SW++++ GY + ++AL+ F M + + T+ + A L L
Sbjct: 1056 LHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINL 1115
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+ G ++ + F ++ + + ++DMY KCG M A ++F E+ D+V W ++SG
Sbjct: 1116 KQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGY 1175
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
NG A V+ + G+QP+ TF L+ + +++G+Q + V L
Sbjct: 1176 IENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIH---ANVVKLDYS 1232
Query: 369 IEHY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++H+ +VD+ + G + +A+ + + M + + W A+L G H D A
Sbjct: 1233 LDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHVDEA 1285
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 185/413 (44%), Gaps = 30/413 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++ +V N A+ F+++ GF P V+ D + H+ VKA
Sbjct: 789 MLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGV--NSDVSNNRKRHAEQVKAY 846
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
A+K+F N+ +W ++ +++ G + AI+ F+
Sbjct: 847 -----------------------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFK 883
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
LL + DS ++V +L+A DL + IH V ++ V V+ SL+++Y+K G
Sbjct: 884 TLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAG 943
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A + F PE D++SW++MI YA N EA+ F ++ R+ LKP+ +T+ VL
Sbjct: 944 VVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLR 1003
Query: 241 ACASLGALE---LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
AC++ E LG + + +++ + T LID+Y+K G+M +A + D D
Sbjct: 1004 ACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFD 1063
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
WNA++ G + + A F + + GI + T + + +G+Q
Sbjct: 1064 LASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ-IQ 1122
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + + ++D+ + G + A EL + P+ + W +++G
Sbjct: 1123 AYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISG 1174
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 170/372 (45%), Gaps = 36/372 (9%)
Query: 45 DFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIIS 104
D +LG R+H+ IV +G D ++ +L+ +Y CG L A +VFD D+++V+W +I++
Sbjct: 626 DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685
Query: 105 GYIN--EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL-----GDLSTAKWIHGYV 157
Y + + E + FR L L+ FSI R+ A G + ++ +HGY
Sbjct: 686 AYAQFADSSYENVLEGFR--LFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743
Query: 158 NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G ++FV+ +LV++Y K G + +AR +FD+MPE+D V W+ M++ Y N F EAL
Sbjct: 744 VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
F R P++ + V+ S + +N + Y
Sbjct: 804 RFFSAFHRSGFXPDFSNLHCVIGGVNS-----------------DVSNNRKRHAEQVKAY 846
Query: 278 AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
A K+F + + WN ++ G + A F L + I + T V
Sbjct: 847 --------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLV 898
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
+L A +D G Q +++ S P++ ++++ ++G + A + + P
Sbjct: 899 IILSAAVGADDLDLGEQ-IHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP- 956
Query: 398 EPNAIVWGALLA 409
E + I W +++
Sbjct: 957 ELDLISWNTMIS 968
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 172/408 (42%), Gaps = 35/408 (8%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
+R GF T T +LK C Q+ H VK G + D FV +L+N+Y G
Sbjct: 708 LREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGL 767
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
+ A +FD +P+++ V W ++ Y+ +EA+ F G PD FS + +
Sbjct: 768 VGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPD-FSNLHCVIG 826
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
D+S + H V YA ++F +I +W
Sbjct: 827 GVN-SDVSNNRKRHA---------------EQVKAYAM--------KMFPFDQGSNIFAW 862
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+ + + G A+D F + R + + T+V +LSA L+LG + + +
Sbjct: 863 NKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIK 922
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ F + +L++MY+K G + A K F + D + WN ++S + N A
Sbjct: 923 SSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICT 982
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF-FNSMSRVFSLTPMIEH----YGCM 375
F L + G++P+ T +L C+ DEG F S V+++ I + +
Sbjct: 983 FRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSFVSTAL 1039
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG-CRLHKKTDLAEH 422
+DL + G++DEA E + + + W A++ G + +K EH
Sbjct: 1040 IDLYSKGGKMDEA-EFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEH 1086
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
++ L+LG A + + + L + L LI MY+KCG + A +VF + D+D V WN+
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 304 VVSGLSM---NGYVKV--AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+++ + + Y V F +FG L + G T LL C +G V
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 359 MSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
++ F L + G +V++ + G + +A L MP E +A++W +L
Sbjct: 743 AVKIGFELDLFVS--GALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVML 790
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/605 (40%), Positives = 379/605 (62%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+V F +I+ + M G P+ T +LKAC + ++G+ +HS ++ G
Sbjct: 217 IIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALG 276
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV TSL+++Y + G A VFD + ++++SW A+ISGY+ G + E+ +FR
Sbjct: 277 MGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFR 336
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RL+ G DS ++V ++ C+Q DL + +H + ++ ++T++VD+Y+KCG
Sbjct: 337 RLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCG 396
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++A VF +M +K++++W++M+ G + NG+ ++AL +F MQ E + T+V ++
Sbjct: 397 AIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVH 456
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR-EMKDKDQV 299
CA LG+L G + R+ + + V+ + LIDMYAKCG++ A K+F E KD +
Sbjct: 457 CCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVI 516
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+ N+++ G M+G+ + A GV+ ++ + ++PN TFV LL C+H+GLV+EG+ F+SM
Sbjct: 517 LCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSM 576
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R + P +HY C+VDL R+G+L+EA EL+K MP +P+ V ALL+GCR HK T++
Sbjct: 577 ERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNM 636
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ ++LI+L+ NSG YV+LSNIY+ + KW IR +M +G++KI G S +EV
Sbjct: 637 GIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGN 696
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V+ F D+SHP IY L+ L +++A G++P T VL D+ E K L HSE+
Sbjct: 697 KVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSER 756
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL++T +I+I KNLRVC DCH K ISKI REIIVRD NRFH F+ G CS
Sbjct: 757 LAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCS 816
Query: 600 CKDFW 604
C DFW
Sbjct: 817 CNDFW 821
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 144/444 (32%), Positives = 229/444 (51%), Gaps = 6/444 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF+ N + M + ++T F LKAC D ++G+ V+ G
Sbjct: 116 MIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRG 175
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+V +S++N V GYLADA KVFD +P+K+VV W +II GY+ +G E+I MF
Sbjct: 176 FHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFL 235
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ GL+P ++ +L AC Q G H YV G G +VFV TSLVD+Y+ G
Sbjct: 236 EMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLG 295
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A VFD M + ++SW++MI GY NG E+ +F + + + T+V ++
Sbjct: 296 DTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIR 355
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C+ LE G S + R E S+ VL T ++DMY+KCG + QA VF M K+ +
Sbjct: 356 GCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVIT 415
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ GLS NGY + A +F Q+++ + N T V L+ C H G + +GR
Sbjct: 416 WTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFI 475
Query: 361 RV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R ++ +I ++D+ + G++ A +L + + I+ +++ G +H
Sbjct: 476 RHGYAFDAVIT--SALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRY 533
Query: 420 AEHVLNQLIA--LEPWNSGNYVLL 441
A V +++I L+P N +V L
Sbjct: 534 ALGVYSRMIEERLKP-NQTTFVSL 556
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 176/358 (49%), Gaps = 2/358 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ I+K + + F+ L+ +Y G+L A VFD A+I+G++
Sbjct: 67 HAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQH 126
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
E +FR + ++ +S++ + L ACT L D I G +++V +S+
Sbjct: 127 MEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSM 186
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
V+ K G + A++VFD MPEKD+V W+S+I GY G E++ MF M L+P
Sbjct: 187 VNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSP 246
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
TM +L AC G ++G+ A S++ ++ + T+L+DMY+ G A VF
Sbjct: 247 VTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDS 306
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M + + WNA++SG NG + ++ +F +L + G + T V L+ GC+ ++ G
Sbjct: 307 MCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENG 366
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
R + + R L + +VD+ + G + +A + M + N I W A+L G
Sbjct: 367 RILHSCIIRK-ELESHLVLSTAIVDMYSKCGAIKQATIVFGRMG-KKNVITWTAMLVG 422
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 14/266 (5%)
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
K IH + + F+A L+ +Y+ G + AR VFDQ + ++MI G+ N
Sbjct: 64 KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
E +F M +++ YT + L AC L E+G+ R F + +G
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
+++++ K G +A A KVF M +KD V WN+++ G G + +F ++ G++
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSM------SRVFSLTPMIEHYGCMVDLLGRSGQ 384
P+ T LL C +GL G + + + VF LT +VD+ G
Sbjct: 244 PSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTS-------LVDMYSNLGD 296
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAG 410
A + SM + I W A+++G
Sbjct: 297 TGSAALVFDSM-CSRSLISWNAMISG 321
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/605 (41%), Positives = 373/605 (61%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GFV N + A++FY+ MR+ G P ++ A AR + G++ H+ +K G
Sbjct: 354 MLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNG 413
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D V SL+++Y + +FD +PDK+VVSWT II+G+ G+ A+ +FR
Sbjct: 414 LDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFR 473
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ D I +L AC+ L +S+ K IH Y+ G ++ + +VD+Y +CG
Sbjct: 474 EVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECG 532
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N++ A R+F+ + KD+VSW+SMI Y NG EAL++F+ M+ ++P+ ++V +LS
Sbjct: 533 NVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILS 592
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A ASL AL+ G F+ R F+ L +TL+DMYA+CG + ++ VF +++KD V+
Sbjct: 593 AAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVL 652
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++++ M+G + A +F ++E I P+ FV +L C+H+GL++EGR+F SM
Sbjct: 653 WTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMK 712
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L P EHY C+VDLLGR+ L+EA++ +K M +EP A VW ALL C++H +L
Sbjct: 713 YEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELG 772
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L+ ++P N GNYVL+SN+YSA +W D +R M G++K GCSW+EV
Sbjct: 773 EIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNK 832
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKL-KAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F+ D SHP S +IYSKL ++ KL K G+V T VL + +EEEK L HSE+
Sbjct: 833 VHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSER 892
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+G++TT +RI KNLRVCGDCH KLISK RE+++RD NRFH F G CS
Sbjct: 893 LAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCS 952
Query: 600 CKDFW 604
C D W
Sbjct: 953 CGDVW 957
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 5/415 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI +V+N ++E Y MR G TFP +LKAC D + G H L +K G
Sbjct: 151 MIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEG 210
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMF 119
FV S++ +Y C L A ++FD +P+K +VVSW ++IS Y + G EA+ +F
Sbjct: 211 YVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLF 270
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ L P++++ V L AC + +IH V ++ NVFVA +L+ +YA+
Sbjct: 271 GEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARF 330
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G M +A +F M + D +SW+SM+ G+ NG EAL ++ M+ KP+ ++ ++
Sbjct: 331 GKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISII 390
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+A A G G+ ++ +N S+ +G +L+DMYAK M +F +M DKD V
Sbjct: 391 AASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVV 450
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W +++G + NG A +F +++ GI + +L C+ L+ ++ + +
Sbjct: 451 SWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYI 510
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R L+ ++ G +VD+ G G +D A + + + + + + W ++++ C +H
Sbjct: 511 IRK-GLSDLVLQNG-IVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS-CYVH 561
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 206/410 (50%), Gaps = 6/410 (1%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHS-LIVKAGL 61
RG V N+ FQ + + + F + + VL+ C + G + H+ +I L
Sbjct: 53 RGSV-NEAFQSLTDLFANQSPSQF-SLDEAYSSVLELCGSKKALSEGQQVHAHMITSNAL 110
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
F+ T L+ +Y CG L DA K+FD +P K + +W A+I Y+ G ++ ++R
Sbjct: 111 FNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYRE 170
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ G+ D+ + +L AC L D +HG + G VFVA S+V +Y KC +
Sbjct: 171 MRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCND 230
Query: 182 MEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ AR++FD+MPEK D+VSW+SMI Y+SNG EAL +F MQ+ +L P YT V L
Sbjct: 231 LNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQ 290
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC ++ G++ + + ++ + N + LI MYA+ G+M +A +F M D D +
Sbjct: 291 ACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTIS 350
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN+++SG NG A + ++ G +P+ + ++ +G G Q ++ +
Sbjct: 351 WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQ-IHAYA 409
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
L ++ +VD+ + + + MP + + + W ++AG
Sbjct: 410 MKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAG 458
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 213/415 (51%), Gaps = 5/415 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + SN A+ + M+ P +TF L+AC + G+ H+ ++K+
Sbjct: 253 MISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSS 312
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +L+ +Y G + +A +F ++ D + +SW +++SG++ G EA+ +
Sbjct: 313 YYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYH 372
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G KPD +++ ++ A + G+ IH Y + G ++ V SLVD+YAK
Sbjct: 373 EMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFC 432
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M+ +FD+MP+KD+VSW+++I G+A NG AL++F +Q E + + + +L
Sbjct: 433 SMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILL 492
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+ L + S++ R LS+ VL ++D+Y +CG + A ++F ++ KD V
Sbjct: 493 ACSGLKLISSVKEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVS 551
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++S NG A +F +++ G++P+ + V +L + +G++ +
Sbjct: 552 WTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLI 611
Query: 361 RV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R F L + +VD+ R G L+++ + + + ++W +++ +H
Sbjct: 612 RKGFVLEGSLA--STLVDMYARCGTLEKSRNVFNFI-RNKDLVLWTSMINAYGMH 663
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/608 (39%), Positives = 372/608 (61%), Gaps = 4/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHD---FQLGVRSHSLIV 57
MI + N+ AI + + +G P FT VL+AC+ + F LG + H +
Sbjct: 966 MISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAI 1025
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
K G+ D FV T+L++LY G + +A + D ++ SW AI+ GYI +A+
Sbjct: 1026 KCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALE 1085
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
F + G+ D ++ + A L +L K I Y + G +++V++ ++D+Y
Sbjct: 1086 HFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYI 1145
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCG+M A +F ++ D V+W++MI GY NG AL +++ M+ ++P+ YT
Sbjct: 1146 KCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFAT 1205
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
++ A + L ALE G + + + ++ + +GT+L+DMY KCG + A +VFR+M +
Sbjct: 1206 LIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK 1265
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WNA++ GL+ +G+V A +F ++ GIQP+ TF+G+L C+H+GL E ++F+
Sbjct: 1266 VVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFD 1325
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
+M + + +TP IEHY C+VD LGR+G++ EA +I SMP + +A ++ ALL CR
Sbjct: 1326 AMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDA 1385
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
+ A+ V ++L+AL+P +S YVLLSNIY+AS +W+D R+MM K ++K G SW++V
Sbjct: 1386 ETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDV 1445
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAG-FVPTTDHVLFDIEEEEKQYFLACH 536
VH F+V D SHP + IY K+++L +++ G +VP TD L D+EEEEK+ L H
Sbjct: 1446 KNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYH 1505
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEKLA+AFGLI+T P IR+ KNLRVCGDCH AIK ISK+T REI++RD NRFH F G
Sbjct: 1506 SEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNG 1565
Query: 597 SCSCKDFW 604
+CSC D+W
Sbjct: 1566 TCSCGDYW 1573
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 209/414 (50%), Gaps = 13/414 (3%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
AI+ + ++ + T +L A D LG + H+L++K+ V SL+N
Sbjct: 878 AIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMN 937
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE-EAINMFRRLLHRGLKPDSF 132
+Y G + A K F + P+ +++SW +IS Y + NLE EAI FR LL GLKPD F
Sbjct: 938 MYSKAGVVYAAEKTFINSPELDLISWNTMISSYA-QNNLEMEAICTFRDLLRDGLKPDQF 996
Query: 133 SIVRVLTACTQLGD----LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
++ VL AC+ GD + +H Y + G + FV+T+L+DLY+K G M++A +
Sbjct: 997 TLASVLRACST-GDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFL 1055
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
+ D+ SW++++ GY + ++AL+ F M + + T+ + A L L
Sbjct: 1056 LHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINL 1115
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+ G ++ + F ++ + + ++DMY KCG M A ++F E+ D+V W ++SG
Sbjct: 1116 KQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGY 1175
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
NG A V+ + G+QP+ TF L+ + +++G+Q + V L
Sbjct: 1176 IENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIH---ANVVKLDYS 1232
Query: 369 IEHY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++H+ +VD+ + G + +A+ + + M + + W A+L G H D A
Sbjct: 1233 LDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHVDEA 1285
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 185/413 (44%), Gaps = 30/413 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++ +V N A+ F+++ GF P V+ D + H+ VKA
Sbjct: 789 MLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGV--NSDVSNNRKRHAEQVKAY 846
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
A+K+F N+ +W ++ +++ G + AI+ F+
Sbjct: 847 -----------------------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFK 883
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
LL + DS ++V +L+A DL + IH V ++ V V+ SL+++Y+K G
Sbjct: 884 TLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAG 943
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A + F PE D++SW++MI YA N EA+ F ++ R+ LKP+ +T+ VL
Sbjct: 944 VVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLR 1003
Query: 241 ACASLGALE---LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
AC++ E LG + + +++ + T LID+Y+K G+M +A + D D
Sbjct: 1004 ACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFD 1063
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
WNA++ G + + A F + + GI + T + + +G+Q
Sbjct: 1064 LASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ-IQ 1122
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + + ++D+ + G + A EL + P+ + W +++G
Sbjct: 1123 AYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISG 1174
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 170/372 (45%), Gaps = 36/372 (9%)
Query: 45 DFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIIS 104
D +LG R+H+ IV +G D ++ +L+ +Y CG L A +VFD D+++V+W +I++
Sbjct: 626 DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685
Query: 105 GYIN--EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL-----GDLSTAKWIHGYV 157
Y + + E + FR L L+ FSI R+ A G + ++ +HGY
Sbjct: 686 AYAQFADSSYENVLEGFR--LFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743
Query: 158 NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G ++FV+ +LV++Y K G + +AR +FD+MPE+D V W+ M++ Y N F EAL
Sbjct: 744 VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
F R P++ + V+ S + +N + Y
Sbjct: 804 RFFSAFHRSGFFPDFSNLHCVIGGVNS-----------------DVSNNRKRHAEQVKAY 846
Query: 278 AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
A K+F + + WN ++ G + A F L + I + T V
Sbjct: 847 --------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLV 898
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
+L A +D G Q +++ S P++ ++++ ++G + A + + P
Sbjct: 899 IILSAAVGADDLDLGEQ-IHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP- 956
Query: 398 EPNAIVWGALLA 409
E + I W +++
Sbjct: 957 ELDLISWNTMIS 968
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 172/408 (42%), Gaps = 35/408 (8%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
+R GF T T +LK C Q+ H VK G + D FV +L+N+Y G
Sbjct: 708 LREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGL 767
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
+ A +FD +P+++ V W ++ Y+ +EA+ F G PD FS + +
Sbjct: 768 VGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPD-FSNLHCVIG 826
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
D+S + H V YA ++F +I +W
Sbjct: 827 GVN-SDVSNNRKRHA---------------EQVKAYAM--------KMFPFDQGSNIFAW 862
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+ + + G A+D F + R + + T+V +LSA L+LG + + +
Sbjct: 863 NKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIK 922
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ F + +L++MY+K G + A K F + D + WN ++S + N A
Sbjct: 923 SSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICT 982
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF-FNSMSRVFSLTPMIEH----YGCM 375
F L + G++P+ T +L C+ DEG F S V+++ I + +
Sbjct: 983 FRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSFVSTAL 1039
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG-CRLHKKTDLAEH 422
+DL + G++DEA E + + + W A++ G + +K EH
Sbjct: 1040 IDLYSKGGKMDEA-EFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEH 1086
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
++ L+LG A + + + L + L LI MY+KCG + A +VF + D+D V WN+
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 304 VVSGLSM---NGYVKV--AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+++ + + Y V F +FG L + G T LL C +G V
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 359 MSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
++ F L + G +V++ + G + +A L MP E +A++W +L
Sbjct: 743 AVKIGFELDLFVS--GALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVML 790
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/604 (40%), Positives = 365/604 (60%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G N C A + M+ EG +P + T+ +L + H V+ G
Sbjct: 495 MMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETG 554
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D V ++ +++Y+ CG + DA +FD + ++V +W A+I G + EA+++F
Sbjct: 555 LISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFL 614
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G PD+ + + +L+A L K +H + +AG ++ V +LV Y+KCG
Sbjct: 615 QMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCG 673
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N++ A++VFD M E+++ +W+ MI G A +G +A F M RE + P+ T V +LS
Sbjct: 674 NVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILS 733
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACAS GALE + +S+ +G L+ MYAKCG + A VF +M ++D
Sbjct: 734 ACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFS 793
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++ GL+ +G A F +++ G +PNG ++V +L C+HAGLVDEGR+ F SM+
Sbjct: 794 WTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMT 853
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + P +EHY CMVDLLGR+G L+EA I +MP+EP+ WGALL C + ++A
Sbjct: 854 QDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMA 913
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + + L+P ++ YVLLSNIY+A+ KW +RSMM KGI+K G SW+EVD
Sbjct: 914 EFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNR 973
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H F+VGD SHP S++IY++L++L +LKA G+VP T VL + ++E K+ L HSEKL
Sbjct: 974 IHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKL 1033
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+ +GL+ T KD IR+ KNLRVC DCH A K ISKITGREI+ RD RFH F +G CSC
Sbjct: 1034 AIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSC 1093
Query: 601 KDFW 604
D+W
Sbjct: 1094 GDYW 1097
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 223/415 (53%), Gaps = 10/415 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A+ Y+ MR E P T+ +LKAC + + G + H+ I+++G
Sbjct: 190 MIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSG 249
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V+T+L+N+YV CG + DA +FD + ++NV+SWT +I G + G +EA ++F
Sbjct: 250 FQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFL 309
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G P+S++ V +L A G L K +H + AG ++ V +LV +YAK G
Sbjct: 310 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 369
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL- 239
+++ AR VFD M E+DI SW+ MI G A +G +EA +F MQR P T + +L
Sbjct: 370 SIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILN 429
Query: 240 -SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
SA AS ALE E F+S+ +G LI MYAKCG + A VF M D+D
Sbjct: 430 ASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDV 489
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ WNA++ GL+ NG AF VF Q+++ G+ P+ T++ LL TH + ++ N
Sbjct: 490 ISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLL--NTHGS--TDALEWVNE 545
Query: 359 MSRVFSLTPMIEHY---GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + T +I + + + R G +D+A L + + + W A++ G
Sbjct: 546 VHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVR-HVTTWNAMIGG 599
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 206/389 (52%), Gaps = 2/389 (0%)
Query: 23 NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLA 82
+G +F++ +L+ C ++ D L + H I+K+G++ + +V LL +Y+ CG L
Sbjct: 111 QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQ 170
Query: 83 DALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT 142
A +VFD + KN+ WT +I GY G+ E+A+ ++ ++ +P+ + + +L AC
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
+L K IH ++ ++G +V V T+LV++Y KCG++E A+ +FD+M E++++SW+
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
MI G A G +EA +F MQRE P YT V +L+A AS GALE S
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAG 350
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
+ +G L+ MYAK G + A VF M ++D W ++ GL+ +G + AF +F
Sbjct: 351 LALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFL 410
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVD-EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
Q+++ G PN T++ +L A E + + + + ++ + +
Sbjct: 411 QMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAK 470
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G +D+A + M + + I W A++ G
Sbjct: 471 CGSIDDARLVFDGM-CDRDVISWNAMMGG 498
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 201/422 (47%), Gaps = 13/422 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLG----VRSHSLI 56
MI G + Q A + M+ G LP T+ +L A A L V H+
Sbjct: 392 MIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHA-- 449
Query: 57 VKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
+AG D + +L+++Y CG + DA VFD + D++V+SW A++ G G EA
Sbjct: 450 EEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAF 509
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F ++ GL PDS + + +L L +H + E G + V ++ + +Y
Sbjct: 510 TVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMY 569
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+CG+++ AR +FD++ + + +W++MI G A +EAL +F MQRE P+ T +
Sbjct: 570 IRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFI 629
Query: 237 GVLSACASLGALELGVWASSFMER--NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+LSA ALE W + L + +G L+ Y+KCG + A +VF +M
Sbjct: 630 NILSANVDEEALE---WVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMV 686
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+++ W ++ GL+ +G AF F Q+ + GI P+ T+V +L C G ++ ++
Sbjct: 687 ERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKE 746
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
N L + +V + + G +D+A + M +E + W ++ G H
Sbjct: 747 VHNHAVSA-GLVSDLRVGNALVHMYAKCGSIDDARSVFDDM-VERDVFSWTVMIGGLAQH 804
Query: 415 KK 416
+
Sbjct: 805 GR 806
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 168/304 (55%), Gaps = 2/304 (0%)
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
++A+ M + + +G+ DSFS V +L C + D+ AK +H + ++G +N++VA L
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ +Y +CG ++ AR+VFD++ +K+I W++MI GYA G ++A+ ++ M++E +P
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
T + +L AC L+ G + + ++ F S+ + T L++MY KCG + A +F +
Sbjct: 220 ITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDK 279
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M +++ + W ++ GL+ G + AF +F Q+++ G PN T+V +L AG ++
Sbjct: 280 MVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWV 339
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
++ +S + L + +V + +SG +D+A + M E + W ++ G
Sbjct: 340 KE-VHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMT-ERDIFSWTVMIGGLA 397
Query: 413 LHKK 416
H +
Sbjct: 398 QHGR 401
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/561 (43%), Positives = 343/561 (61%), Gaps = 35/561 (6%)
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
Y G L ++ +F + +V WTAII G+ G E+A+N + ++L +G++P++F+
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
+L C + K +H + G +++V T L+D+YA+ G++ A+++FD MPE
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 195 KDIVS-------------------------------WSSMIQGYASNGFPKEALDMFYNM 223
K +VS W+ MI GY NG P EAL +F M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
+ KP T++ VLSAC LGALE G W S++E N N +GT L+DMY+KCG +
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
A VF ++ DKD V WN+++ G +M G+ + A +F + + G+ P TF+G+L C
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
H+G V EG FN M + + P IEHYGCMV+LLGR+G +++A+EL+K+M +EP+ ++
Sbjct: 315 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 374
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGD 463
WG LL CRLH K L E ++ L+ NSG Y+LLSNIY+A W+ A++R+MM D
Sbjct: 375 WGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKD 434
Query: 464 KGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
G++K GCS +EV+ VHEFL G +HP ++IY L+E+ LK+ G+ P TD VL D
Sbjct: 435 SGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHD 494
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
I E EK+ L HSEKLA+AFGLI T P I+I KNLRVC DCHE KLISKITGR+I+
Sbjct: 495 IGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIV 554
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
VRD NRFH F+ GSCSC D+W
Sbjct: 555 VRDRNRFHHFVNGSCSCGDYW 575
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 186/353 (52%), Gaps = 41/353 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G + A+ FY M +G P FTF +LK C E G HS VK G
Sbjct: 46 IIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEP----GKALHSQAVKLG 101
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS---------------------- 98
D D +V+T LL++Y G + A ++FD +P+K++VS
Sbjct: 102 FDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFD 161
Query: 99 ---------WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
W +I GY G EA+ +FRR+L KP+ +++ VL+AC QLG L +
Sbjct: 162 GMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALES 221
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+W+H Y+ G NV V T+LVD+Y+KCG++E AR VFD++ +KD+V+W+SMI GYA
Sbjct: 222 GRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAM 281
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
GF +EAL +F +M R L P T +G+LSAC G + G W ++E+ P +
Sbjct: 282 XGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEG-WDIFNKMKDEYGIEPKI 340
Query: 270 G--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFG 319
++++ + G + QA ++ + M + D V+W ++ ++G K+A G
Sbjct: 341 EHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG--KIALG 391
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/585 (41%), Positives = 359/585 (61%), Gaps = 33/585 (5%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNL--YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
HS I++ GL D ++ G L AL+VFD IP + + I GY+
Sbjct: 40 HSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQ 99
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
I M+ R+LH+ + P+ F+ ++ AC + K IH +V + G G + F
Sbjct: 100 LARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLN 159
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF-----------PK----- 214
+L+ +Y ++E+ARRVFD MP++D+VSW+S+I GY+ GF P+
Sbjct: 160 NLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVS 219
Query: 215 ---------------EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
EA +F M+ EN+ + + +LSAC LGALE G W ++E
Sbjct: 220 WNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIE 279
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
++ + L TT+IDMY KCG + +A +VF E+ K WN ++ GL+M+G + A
Sbjct: 280 KSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIE 339
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F ++E+ + P+G TFV +L C H+GLV+EG+ +F M+ V L P +EH+GCMVDLL
Sbjct: 340 LFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLL 399
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
GR+G L+EA +LI MP+ P+A V GAL+ CR+H T+L E + ++I LEP NSG YV
Sbjct: 400 GRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYV 459
Query: 440 LLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYS 499
LL+N+Y+++ +W D AK+R +M D+G++K G S +E + V EF+ G +HP +++IY+
Sbjct: 460 LLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYA 519
Query: 500 KLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAK 559
KLDE+ +++ G+VP TD VL DI+EEEK+ L HSEKLA+AFGL+ T P + +RI+K
Sbjct: 520 KLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISK 579
Query: 560 NLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
NLR+C DCH+A KLISK+ REII+RD NRFH F G CSCKD+W
Sbjct: 580 NLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 183/352 (51%), Gaps = 47/352 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+ RG++ ++ I Y+ M ++ P FT+P +++AC ++ + G + H+ ++K G
Sbjct: 91 IFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFG 150
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISG--------------- 105
D F +L+++YV+ L A +VFD++P ++VVSWT++I+G
Sbjct: 151 FGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFE 210
Query: 106 ----------------YINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
Y+ L EA +F R+ + D F +L+ACT LG L
Sbjct: 211 LMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQ 270
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
KWIHGY+ ++G + +AT+++D+Y KCG +EKA VF+++P+K I SW+ MI G A
Sbjct: 271 GKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAM 330
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+G + A+++F M+RE + P+ T V VLSACA G +E G +M VL
Sbjct: 331 HGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYM-------TEVL 383
Query: 270 GTT--------LIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNG 312
G ++D+ + G + +A K+ EM + D V A+V ++G
Sbjct: 384 GLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHG 435
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/606 (39%), Positives = 376/606 (62%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF N A+E ++ MR + + T +L C + D GV H +K G
Sbjct: 211 MISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLG 270
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV +L+N+Y G L A +F+ + +++VSW ++++ + A+ ++
Sbjct: 271 LEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYN 330
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE-AGKGRNVFVATSLVDLYAKC 179
++ G+ PD ++V + + +LG+ +++ IHG+V ++ + +++D+YAK
Sbjct: 331 KMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKL 390
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGV 238
G ++ AR+VF+ +P KD++SW+S+I GY+ NG EA+D++ +M+ P T V +
Sbjct: 391 GFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSI 450
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L+A + LGAL+ G+ A + +N + + T L+DMY KCG++A A +F E+ +
Sbjct: 451 LTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSS 510
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WNA++S ++GY A +F +++ G++P+ TFV LL C+H+GLVDEG+ F
Sbjct: 511 VSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQL 570
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + + P ++HYGCMVDL GR+G L++A +K+MP+ P+ VWGALL CR+H+ +
Sbjct: 571 MQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVE 630
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L V + L+ +E N G YVLLSNIY+ W ++RS+ D+G++K G S +EVD
Sbjct: 631 LVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVD 690
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
+ F G+ +HP E+IYS+L L K+K+ G+VP + VL D+E++EK+ L HSE
Sbjct: 691 KKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSE 750
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LA+AFG+I+T PK ++I KNLRVCGDCH A K ISKIT REIIVRD+NRFH F +G C
Sbjct: 751 RLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVC 810
Query: 599 SCKDFW 604
SC D+W
Sbjct: 811 SCGDYW 816
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 222/417 (53%), Gaps = 8/417 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI + F A++ +N + FL ++ +TFP V++AC D G + H L++K
Sbjct: 112 MISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKL 168
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G +CD ++ S ++ Y G+++ A +FD++ +++ +W A+ISG+ G + EA+ +F
Sbjct: 169 GFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVF 228
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ + + DS +I +L C QL D+ + IH Y + G ++FV +L+++YAK
Sbjct: 229 DEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKF 288
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + A +F+QM +DIVSW+S++ + N P AL ++ M + P+ T+V +
Sbjct: 289 GELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLA 348
Query: 240 SACASLGALELGVWASSFMERN-EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
S A LG F+ R FL + LG +IDMYAK G + A KVF + KD
Sbjct: 349 SVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDV 408
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+ WN++++G S NG A V+ + G PN T+V +L + G + +G +
Sbjct: 409 ISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHG 468
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + F L I C+VD+ G+ G+L +A L +P + +++ W A+++ LH
Sbjct: 469 QLIKNF-LYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQ-SSVSWNAIISCHGLH 523
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 184/379 (48%), Gaps = 8/379 (2%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
F + C + H L + H+L+V +G F+ L+N Y G + A FD I
Sbjct: 46 FNRIFLYCTKVH---LAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQ 102
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAK 151
K+V +W ++IS Y G+ A++ F L L+ D ++ V+ AC G+L +
Sbjct: 103 TKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGR 159
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+H V + G +V++A S + Y++ G + A +FD M +DI +W++MI G+ NG
Sbjct: 160 KVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNG 219
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
EAL++F M+ +++ + T+ +L C L + GV + + + +
Sbjct: 220 KVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCN 279
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
LI+MYAK G + A +F +MK +D V WN++++ N +A GV+ ++ G+ P
Sbjct: 280 ALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVP 339
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ T V L G R ++R I ++D+ + G +D A ++
Sbjct: 340 DLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKV 399
Query: 392 IKSMPMEPNAIVWGALLAG 410
+ +P++ + I W +L+ G
Sbjct: 400 FEGLPVK-DVISWNSLITG 417
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 146/297 (49%), Gaps = 17/297 (5%)
Query: 136 RVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
R+ CT++ AK +H + +GK +++F++ L++ YA G++ AR FDQ+ K
Sbjct: 48 RIFLYCTKV---HLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTK 104
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYN-MQRENLKPEYYTMVGVLSACASLGALELGVWA 254
D+ +W+SMI YA G A+D F + L+ ++YT V+ AC G L+ G
Sbjct: 105 DVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKV 161
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
+ + F + + + I Y++ G ++ AC +F M +D WNA++SG +NG V
Sbjct: 162 HCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKV 221
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH--Y 372
A VF ++ + + T LL C + G + V+++ +E +
Sbjct: 222 AEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISG-----VLIHVYAIKLGLEFDLF 276
Query: 373 GC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
C ++++ + G+L A + M + + + W +LLA +KK +A V N++
Sbjct: 277 VCNALINMYAKFGELRSAETIFNQMKVR-DIVSWNSLLAAFEQNKKPVIALGVYNKM 332
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/640 (38%), Positives = 380/640 (59%), Gaps = 36/640 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+V + A+E Y+ M++E G P FTF +L CA + + G + H+ +++A
Sbjct: 449 LLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRA 508
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ + V+T L+++Y CG L A ++F+ + ++N SW ++I GY G +EA+ +F
Sbjct: 509 NITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLF 568
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+++ G+KPD FS+ +L++C L D + +H ++ + LVD+YAKC
Sbjct: 569 KQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKC 628
Query: 180 GNMEKARRVFDQMPEKDIVS-------------------------------WSSMIQGYA 208
G+M+ A +V+DQ +KD++ W+S++ GYA
Sbjct: 629 GSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYA 688
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS-NP 267
+ G KE+ + F M +++ + TMV +++ C+SL ALE G S + + F++ +
Sbjct: 689 NKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSV 748
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
VL T L+DMY+KCG + +A VF M K+ V WNA++SG S +G K A ++ ++ K
Sbjct: 749 VLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKK 808
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G+ PN TF+ +L C+H GLV+EG + F SM +++ EHY CMVDLLGR+G+L++
Sbjct: 809 GMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLED 868
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E ++ MP+EP WGALL CR+HK D+ +L L+P N G YV++SNIY+A
Sbjct: 869 AKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAA 928
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +W + IR MM KG++K G SW+E++ + F G +HP +E+IY+ L L +
Sbjct: 929 AGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQ 988
Query: 508 LKAAGFVPTTDHVLF---DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
K G++P T +L DI+EEE++ +L HSE+LAL+ GLI+ K IR+ KNLR+C
Sbjct: 989 SKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRIC 1048
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
GDCH A K ISKITGR II RD NRFH F G CSC D+W
Sbjct: 1049 GDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 253/481 (52%), Gaps = 19/481 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS-HSLIVKA 59
MI + D + + Y MR G FTFP V+KAC D GVR S +VKA
Sbjct: 146 MILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMG-GVRQLQSSVVKA 204
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL+C+ FV +L++ Y G++ DA+ D+I +VV+W A+I+GY+ + EEA +F
Sbjct: 205 GLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIF 264
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+L G+ PD+F+ L C L K +H + G + FV +L+D+YAKC
Sbjct: 265 DRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKC 324
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ E +VFD+M E++ V+W+S+I A G +AL +F MQ K + + +L
Sbjct: 325 DDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSIL 384
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A A L + G + RN S+ +LG+ L+DMY+KCG + +A +VFR + ++++V
Sbjct: 385 MASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEV 444
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+NA+++G G + A ++ ++ + GIQP+ TF LL C + ++GRQ
Sbjct: 445 SYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAH 504
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ R ++T I +V + G+L+ A E+ M E NA W +++ G + + +T
Sbjct: 505 LIRA-NITKNIIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQ 562
Query: 419 LAEHVLN--QLIALEPWNSGNYVLLSNIYSASHKWNDAAK--------IRSMMGDKGIQK 468
A + QL ++P + LS++ S+ +D+ K +R+ M ++GI +
Sbjct: 563 EALRLFKQMQLNGIKP----DCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ 618
Query: 469 I 469
+
Sbjct: 619 V 619
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 222/436 (50%), Gaps = 33/436 (7%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
F A+ + M+ G+ F +L A A D G H +V+ L+ D + ++
Sbjct: 358 FNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSA 417
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLKP 129
L+++Y CG + +A +VF + ++N VS+ A+++GY+ EG EEA+ ++ + G++P
Sbjct: 418 LVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQP 477
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
D F+ +LT C + + + IH ++ A +N+ V T LV +Y++CG + A+ +F
Sbjct: 478 DQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIF 537
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
++M E++ SW+SMI+GY NG +EAL +F MQ +KP+ +++ +LS+C SL +
Sbjct: 538 NRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQ 597
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV-------------------- 289
G +F+ RN +L L+DMYAKCG M A KV
Sbjct: 598 KGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFV 657
Query: 290 -----------FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
F +M+ ++ +WN++++G + G K +F F ++ + I+ + T V
Sbjct: 658 NSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVT 717
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
++ C+ ++ G Q + + + + + +VD+ + G + +A + +M +
Sbjct: 718 IVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGK 777
Query: 399 PNAIVWGALLAGCRLH 414
N + W A+++G H
Sbjct: 778 -NIVSWNAMISGYSKH 792
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 197/383 (51%), Gaps = 9/383 (2%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD---ALKVFD 89
+ +++ C + FQ G H+ ++ G + D ++ T +L LY G L D A K+F+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
++P++N+ +W +I Y + E + ++ R+ G D F+ V+ AC + D+
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGG 193
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ + V +AG N+FV +LVD YA+ G M+ A D++ +V+W+++I GY
Sbjct: 194 VRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVK 253
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+EA +F M + + P+ +T L C +L + + G S + F + +
Sbjct: 254 ILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFV 313
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
G LIDMYAKC KVF EM +++QV WN+++S + G+ A +F ++++ G
Sbjct: 314 GNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGY 373
Query: 330 QPNGNTFVGLLCGCTHAGLVD--EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+ N +L AGL D +GR+ + R L I +VD+ + G ++E
Sbjct: 374 KSNRFNLGSILMAS--AGLADIGKGRELHGHLVRNL-LNSDIILGSALVDMYSKCGMVEE 430
Query: 388 AHELIKSMPMEPNAIVWGALLAG 410
AH++ +S+ +E N + + ALLAG
Sbjct: 431 AHQVFRSL-LERNEVSYNALLAG 452
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/581 (42%), Positives = 367/581 (63%), Gaps = 4/581 (0%)
Query: 28 PTNFT-FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALK 86
P N + + +L++C + G + H+ ++ +G D + T L++LY CG+++ A +
Sbjct: 65 PYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARR 124
Query: 87 VFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQL 144
VFD++P++ NV W +I Y +G E AI ++R +L G +KPD+F+ VL AC L
Sbjct: 125 VFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAAL 184
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
DLS + +H V +VFV T L+D+YAKCG M++A VF+ +D W+SMI
Sbjct: 185 LDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMI 244
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
NG P EAL + NM E + P T+V +SA A AL G + R F
Sbjct: 245 AACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFG 304
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
S L T+L+DMYAK G + A +F ++ ++ + WNA++ G M+G+ AF +F ++
Sbjct: 305 SQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRM 364
Query: 325 E-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
+ + P+ TFVG+L C H G+V E ++ F+ M V+S+ P ++HY C+VD+LG SG
Sbjct: 365 RSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSG 424
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
+ EA ++IK M ++P++ +WGALL GC++HK +LAE L +LI LEP ++GNYVLLSN
Sbjct: 425 RFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSN 484
Query: 444 IYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDE 503
IY+ S KW +AA++R +M ++G++KI CSW+E+ G H FLVGD SHP S+ IY +L+
Sbjct: 485 IYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELER 544
Query: 504 LATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRV 563
L + G+VP T V ++E++EK+ + HSE+LA+AFGLI+T P+ + + KNLRV
Sbjct: 545 LEGLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRV 604
Query: 564 CGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
C DCH IKLIS+I REII+RD NR+H F+ G CSCKD W
Sbjct: 605 CEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 172/339 (50%), Gaps = 6/339 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR + + + AIE Y +M G + P NFT+P VLKACA D G H +++
Sbjct: 141 LIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRT 200
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D FV T L+++Y CG + +A VF+D ++ W ++I+ G EA+ +
Sbjct: 201 NWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLC 260
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R + G+ P ++V ++A L + +HGY G G + TSL+D+YAK
Sbjct: 261 RNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKS 320
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGV 238
G + A +F+Q+ ++++SW++MI G+ +G A ++F M+ E + P++ T VGV
Sbjct: 321 GWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGV 380
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK 296
LSAC G ++ M + P + T L+D+ GR +A V + M K
Sbjct: 381 LSACNHGGMVQEAKEVFDLMV-TVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVK 439
Query: 297 -DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
D +W A+++G ++ V++A +L + + GN
Sbjct: 440 PDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGN 478
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/609 (40%), Positives = 365/609 (59%), Gaps = 44/609 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG +N F +AI + M G P T+PFVLK+ A +LG+ H +I++ G
Sbjct: 150 LIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCG 209
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-----NVVSWTAIISGYINEGNLEEA 115
++ D FV+ SL+++YV L A KVFD+ P++ + + W +I G G++++A
Sbjct: 210 IELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKA 269
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+ +F+ + K NV +T L+D
Sbjct: 270 VKLFKAM--------------------------------------PKKENVSWST-LIDG 290
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
+AK G+M++A +FDQMPEK++VSW++M+ G++ NG ++AL MF M E ++P +T+
Sbjct: 291 FAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTI 350
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
V LSACA +G LE G+ +++ N LGT L+DMYAKCG + A +VF E +
Sbjct: 351 VSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQ 410
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
K W ++ G +++G+ + A F Q+ GI+P+ F+ LL C H+G VD G F
Sbjct: 411 KSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNF 470
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F+SM + + P ++HY +VD+LGRSGQL EA I+ MPM P+ ++WGAL CR HK
Sbjct: 471 FDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHK 530
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
KT +A+ LN+L+ LEP ++GNY+ LSN Y+A +W DA ++R +M ++G+ K G S +
Sbjct: 531 KTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCI 590
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
EV+G VH F+ GD+ H S+ I KL+E+ G++P T+ VL ++E+EEK+ L
Sbjct: 591 EVEGQVHRFVSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGS 650
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
H EKLALAF LI T+P IRI KNL+VCGDCH +K SKI+ REI++RD RFH F +
Sbjct: 651 HGEKLALAFALICTSPGMTIRIVKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKD 710
Query: 596 GSCSCKDFW 604
GSCSC+D W
Sbjct: 711 GSCSCRDHW 719
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 27/281 (9%)
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IH + + + T L+ + ++ + VF+ K++ +++++I+G +N
Sbjct: 100 IHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSH 159
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
A+ F M R +KP+ T VL + A L + ELG+ + R + + +
Sbjct: 160 FFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVS 219
Query: 273 LIDMYAKCGRMAQACKVFREMKDK-----DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L+DMY K ++ A KVF E ++ ++WN ++ G G +K A +F + K
Sbjct: 220 LVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPK- 278
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
++ L+ G G +D + F+ M + + MVD R+G ++
Sbjct: 279 ---KENVSWSTLIDGFAKNGDMDRAMELFDQMPE-----KNVVSWTTMVDGFSRNGDSEK 330
Query: 388 AHELIKSMPME---PNAIV----------WGALLAGCRLHK 415
A + M E PNA G L AG R+HK
Sbjct: 331 ALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHK 371
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/605 (40%), Positives = 366/605 (60%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ +V N + AI+F+ M GF P + +L A G H+ VK
Sbjct: 336 MLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQR 395
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D + +L+++Y+ C + + +VFD + K+ VSWT II+ Y EAI FR
Sbjct: 396 LDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFR 455
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
G+K D + +L AC+ L +S K +H Y G ++ + ++D+Y +CG
Sbjct: 456 TAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECG 514
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A +F+ + +KDIV+W+SM+ +A NG EA+ +F M ++P+ +VG+L
Sbjct: 515 EVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILG 574
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A L +L G F+ R +F + ++L+DMY+ CG M A KVF E K KD V+
Sbjct: 575 AIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVL 634
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A+++ M+G+ K A +F ++ + G+ P+ +F+ LL C+H+ LVDEG+ + + M
Sbjct: 635 WTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMV 694
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L P EHY C+VDLLGRSGQ +EA++ IKSMP+EP ++VW ALL CR+HK +LA
Sbjct: 695 SKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELA 754
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
++L+ LEP N GNYVL+SN+++ KWN+ +IR+ M ++G++K CSW+E+
Sbjct: 755 MIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNT 814
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAG-FVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F D+SH S+ I+ KL E+ KL+ G +V T VL D+ EEEK L HSE+
Sbjct: 815 VHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSER 874
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA++FGLI+TA +RIAKNLRVCGDCHE KL+SK+ REI+VRD NRFH F G+CS
Sbjct: 875 LAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCS 934
Query: 600 CKDFW 604
C DFW
Sbjct: 935 CGDFW 939
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 205/400 (51%), Gaps = 9/400 (2%)
Query: 14 AIEFYNSMRNE----GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKT 69
A+ Y +MR G P T VLKAC E D + G H L VK+GLD V
Sbjct: 143 AVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVAN 202
Query: 70 SLLNLYVHCGYLADALKVFDDIPD-KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+L+ +Y CG L AL+VF+ + D ++V SW + ISG + G EA+++FRR+ G
Sbjct: 203 ALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFS 262
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
+S++ V VL C +L L+ + +H + + G N+ +L+ +YA+CG ++ A RV
Sbjct: 263 MNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI-QCNALLVMYARCGWVDSALRV 321
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F ++ +KD +SW+SM+ Y N EA+D F M + P++ +V +LSA LG L
Sbjct: 322 FREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRL 381
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
G ++ + S+ + TL+DMY KC + + +VF M+ KD V W +++
Sbjct: 382 INGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACY 441
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+ + A G F +K GI+ + +L C+ + +Q + R L +
Sbjct: 442 AQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLI 501
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
+++ ++D+ G G++ A + + M + + + W +++
Sbjct: 502 LKNR--IIDIYGECGEVCYALNIFE-MLDKKDIVTWTSMV 538
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 174/345 (50%), Gaps = 14/345 (4%)
Query: 20 SMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE---FVKTSLLNLYV 76
S R PT+ + +VL A G + H+ V G D+ F+ T LL +Y
Sbjct: 46 SARGRAPPPTDH-YGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYG 104
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR----GLKPDSF 132
CG L DA ++FD +P + V SW A+I ++ G EA+ ++R + G PD
Sbjct: 105 KCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGC 164
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++ VL AC GD +HG ++G R+ VA +LV +YAKCG ++ A RVF+ M
Sbjct: 165 TLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWM 224
Query: 193 PE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+ +D+ SW+S I G NG EALD+F MQ + YT VGVL CA L L G
Sbjct: 225 RDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHG 284
Query: 252 --VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
+ A+ EF + L+ MYA+CG + A +VFRE+ DKD + WN+++S
Sbjct: 285 RELHAALLKCGTEF---NIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYV 341
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
N A FG++ + G P+ V LL H G + GR+
Sbjct: 342 QNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGRE 386
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK-- 326
L T L+ MY KCGR+ A ++F M + WNA++ +G A GV+ +
Sbjct: 95 LATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASE 154
Query: 327 --CGIQPNGNTFVGLLCGCTHAGLVDEGR--QFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
G P+G T +L C G +GR + ++ L +V + +
Sbjct: 155 PVAGAAPDGCTLASVLKACGAEG---DGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKC 211
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G LD A + + M + W + ++GC
Sbjct: 212 GLLDSALRVFEWMRDGRDVASWNSAISGC 240
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/605 (40%), Positives = 362/605 (59%), Gaps = 4/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPF-VLKACAREHDFQLGVRSHSLIVKA 59
MI G+ N+ + +I+ + + NE + T +L A A + +LG++ HSL K
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G ++V T ++LY CG + +F + ++V++ A+I GY + G E ++++F
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ L+ G + S ++V ++ G L IHGY ++ + V+T+L +Y+K
Sbjct: 311 KELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKL 367
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+E AR++FD+ PEK + SW++MI GY NG ++A+ +F MQ+ P T+ +L
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCIL 427
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACA LGAL LG W + +F S+ + T LI MYAKCG +A+A ++F M K++V
Sbjct: 428 SACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV 487
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN ++SG ++G + A +F ++ GI P TF+ +L C+HAGLV EG + FNSM
Sbjct: 488 TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ P ++HY CMVD+LGR+G L A + I++M +EP + VW LL CR+HK T+L
Sbjct: 548 IHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNL 607
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A V +L L+P N G +VLLSNI+SA + AA +R + + K G + +E+
Sbjct: 608 ARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGE 667
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
H F GD SHP ++IY KL++L K++ AG+ P T+ L D+EEEE++ + HSE+
Sbjct: 668 TPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSER 727
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI T P IRI KNLRVC DCH KLISKIT R I+VRD NRFH F +G CS
Sbjct: 728 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCS 787
Query: 600 CKDFW 604
C D+W
Sbjct: 788 CGDYW 792
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 217/455 (47%), Gaps = 16/455 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++RGF N+ ++ + +R L P + T+ F + A + D + G H V
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D + + ++++ +Y + DA KVFD +P+K+ + W +ISGY E+I +F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 120 RRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
R L++ + D+ +++ +L A +L +L IH + G + +V T + LY+K
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSK 268
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG ++ +F + + DIV++++MI GY SNG + +L +F + + T+V +
Sbjct: 269 CGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+ G L L + ++ FLS+ + T L +Y+K + A K+F E +K
Sbjct: 329 VPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WNA++SG + NG + A +F +++K PN T +L C G + G+ + +
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK-WVHD 444
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ R I ++ + + G + EA L M + N + W +++G LH +
Sbjct: 445 LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISGYGLHGQ-- 501
Query: 419 LAEHVLNQLIALEPWNSG----NYVLLSNIYSASH 449
+ LN I E NSG L +Y+ SH
Sbjct: 502 -GQEALN--IFYEMLNSGITPTPVTFLCVLYACSH 533
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 174/365 (47%), Gaps = 13/365 (3%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
++H+ I+ G D + T L G + A +F + +V + ++ G+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 111 NLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+ ++++F L LKP+S + ++A + D + IHG G + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-L 228
+++V +Y K +E AR+VFD+MPEKD + W++MI GY N E++ +F ++ E+
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+ + T++ +L A A L L LG+ S + S+ + T I +Y+KCG++
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+FRE + D V +NA++ G + NG +++ +F +L G + +T V L+ H L
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 349 VDEGRQF---FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
+ + N +S T + Y + ++ DE+ E KS+P W
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE--KSLPS------WN 389
Query: 406 ALLAG 410
A+++G
Sbjct: 390 AMISG 394
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/604 (39%), Positives = 363/604 (60%), Gaps = 2/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + A++ + + + P FT +L AC F LG + HS ++++G
Sbjct: 219 MITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSG 278
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D FV +L+++Y + ++ K+F+ + NV+SWTA+ISGY+ +EAI +F
Sbjct: 279 LASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFC 338
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+LH + P+ F+ VL AC L D K +HG + G V SL+++YA+ G
Sbjct: 339 NMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSG 398
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
ME AR+ F+ + EK+++S+++ A E+ + + ++ + +T +LS
Sbjct: 399 TMECARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLS 456
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A +G + G + + ++ F +N + LI MY+KCG A +VF +M ++ +
Sbjct: 457 GAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVIT 516
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++SG + +G+ A +F ++ + G++PN T++ +L C+H GL+DE + FNSM
Sbjct: 517 WTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMH 576
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
S++P +EHY CMVDLLGRSG L EA E I SMP + +A+VW L CR+H+ T L
Sbjct: 577 YNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLG 636
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
EH +++ EP + Y+LLSN+Y++ +W+D A +R M K + K G SW+EVD
Sbjct: 637 EHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQ 696
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH+F VGD SHP + KIY +LDELA K+K G++P TD VL D+E+E+K+ +L HSEK+
Sbjct: 697 VHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKI 756
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+ LI+T IR+ KNLRVCGDCH AIK IS +TGREI+VRD NRFH +G CSC
Sbjct: 757 AVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSC 816
Query: 601 KDFW 604
D+W
Sbjct: 817 NDYW 820
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 197/390 (50%), Gaps = 8/390 (2%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG-LDCDEFVKTSLLNLYVHCGY-LADAL 85
P + F +L++C+ F G+ + ++K G D V +L++++ G + A
Sbjct: 143 PNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSAR 202
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
VFD + KN+V+WT +I+ Y G L++A+++F RLL PD F++ +L+AC +L
Sbjct: 203 MVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELE 262
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
S K +H +V +G +VFV +LVD+YAK +E +R++F+ M +++SW+++I
Sbjct: 263 FFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALIS 322
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GY + +EA+ +F NM ++ P +T VL ACASL +G + +
Sbjct: 323 GYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLST 382
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+G +LI+MYA+ G M A K F + +K+ + +N + +F ++E
Sbjct: 383 INCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVE 440
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQ 384
G+ + T+ LL G G + +G Q + + F I + ++ + + G
Sbjct: 441 HTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINN--ALISMYSKCGN 498
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ A ++ M N I W ++++G H
Sbjct: 499 KEAALQVFNDMGYR-NVITWTSIISGFAKH 527
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 183/363 (50%), Gaps = 8/363 (2%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI--P 92
+LKAC R + +LG H ++ +GL D + SL+ LY CG +AL +F ++
Sbjct: 44 LLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHH 103
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG---LKPDSFSIVRVLTACTQLGDLST 149
+++VSW+AIIS + N A+ F +L + P+ + +L +C+ +T
Sbjct: 104 KRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163
Query: 150 AKWIHGYVNEAGK-GRNVFVATSLVDLYAKCG-NMEKARRVFDQMPEKDIVSWSSMIQGY 207
I ++ + G +V V +L+D++ K G +++ AR VFD+M K++V+W+ MI Y
Sbjct: 164 GLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRY 223
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+ G +A+D+F + P+ +T+ +LSAC L LG S++ R+ S+
Sbjct: 224 SQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDV 283
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+G TL+DMYAK + + K+F M + + W A++SG + + A +F +
Sbjct: 284 FVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHG 343
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+ PN TF +L C G+Q ++ L+ + ++++ RSG ++
Sbjct: 344 HVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKL-GLSTINCVGNSLINMYARSGTMEC 402
Query: 388 AHE 390
A +
Sbjct: 403 ARK 405
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 147/338 (43%), Gaps = 46/338 (13%)
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
L A+ D ++ + ++ I GNLE + +L+ GL DS
Sbjct: 24 LRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDS--------- 74
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM--PEKDIV 198
+ SL+ LY+KCG+ E A +F M ++D+V
Sbjct: 75 --------------------------VLLNSLITLYSKCGDWENALSIFRNMGHHKRDLV 108
Query: 199 SWSSMIQGYASNGFPKEALDMFYNM---QRENLKPEYYTMVGVLSACASLGALELGVWAS 255
SWS++I +A+N AL F +M R + P Y +L +C++ G+
Sbjct: 109 SWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIF 168
Query: 256 SFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACK-VFREMKDKDQVVWNAVVSGLSMNGY 313
+F+ + + + V +G LIDM+ K G Q+ + VF +M+ K+ V W +++ S G
Sbjct: 169 AFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGL 228
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
+ A +F +L P+ T LL C G+Q + + R + + G
Sbjct: 229 LDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF--VG 286
Query: 374 C-MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
C +VD+ +S ++ + ++ +M + N + W AL++G
Sbjct: 287 CTLVDMYAKSAAVENSRKIFNTM-LHHNVMSWTALISG 323
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/605 (41%), Positives = 374/605 (61%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GFV N + A++FY+ MR+ G P ++ A AR + G++ H+ +K G
Sbjct: 390 MLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNG 449
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D V SL+++Y + +FD +PDK+VVSWT II+G+ G+ A+ +FR
Sbjct: 450 LDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFR 509
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ D I +L AC+ L +S+ K IH Y+ G ++ + +VD+Y +CG
Sbjct: 510 EVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECG 568
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N++ A R+F+ + KD+VSW+SMI Y NG EAL++F+ M+ ++P+ ++V +LS
Sbjct: 569 NVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILS 628
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A ASL AL+ G F+ R F+ L +TL+DMYA+CG + ++ VF +++KD V+
Sbjct: 629 AAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVL 688
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++++ M+G + A +F ++E I P+ FV +L C+H+GL++EGR+F SM
Sbjct: 689 WTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMK 748
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L P EHY C+VDLLGR+ L+EA++ +K M +EP A VW ALL C++H +L
Sbjct: 749 YEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELG 808
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L+ ++P N GNYVL+SN+Y+A +W D ++R M G++K GCSW+EV
Sbjct: 809 EIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNK 868
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKL-KAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F+ D SHP S +IYSKL ++ KL K G+V T VL + +EEEK L HSE+
Sbjct: 869 VHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSER 928
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+G++TT +RI KNLRVCGDCH KLISK RE+++RD NRFH F G CS
Sbjct: 929 LAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCS 988
Query: 600 CKDFW 604
C D W
Sbjct: 989 CGDVW 993
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 5/415 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI +V+N ++E Y MR G TFP +LKAC D + G H L +K G
Sbjct: 187 MIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEG 246
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMF 119
FV S++ +Y C L A ++FD +P+K +VVSW ++IS Y + G EA+ +F
Sbjct: 247 YVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLF 306
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ L P++++ V L AC + +IH V ++ NVFVA +L+ +YA+
Sbjct: 307 GEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARF 366
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G M +A +F M + D +SW+SM+ G+ NG EAL ++ M+ KP+ ++ ++
Sbjct: 367 GKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISII 426
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+A A G G+ ++ +N S+ +G +L+DMYAK M +F +M DKD V
Sbjct: 427 AASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVV 486
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W +++G + NG A +F +++ GI + +L C+ L+ ++ + +
Sbjct: 487 SWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYI 546
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R L+ ++ G +VD+ G G +D A + + + + + + W ++++ C +H
Sbjct: 547 IRK-GLSDLVLQNG-IVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS-CYVH 597
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 206/410 (50%), Gaps = 6/410 (1%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHS-LIVKAGL 61
RG V N+ FQ + + + F + + VL+ C + G + H+ +I L
Sbjct: 89 RGSV-NEAFQSLTDLFANQSPSQF-SLDEAYSSVLELCGSKKALSEGQQVHAHMITSNAL 146
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
F+ T L+ +Y CG L DA K+FD +P K + +W A+I Y+ G ++ ++R
Sbjct: 147 FNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYRE 206
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ G+ D+ + +L AC L D +HG + G VFVA S+V +Y KC +
Sbjct: 207 MRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCND 266
Query: 182 MEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ AR++FD+MPEK D+VSW+SMI Y+SNG EAL +F MQ+ +L P YT V L
Sbjct: 267 LNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQ 326
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC ++ G++ + + ++ + N + LI MYA+ G+M +A +F M D D +
Sbjct: 327 ACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTIS 386
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN+++SG NG A + ++ G +P+ + ++ +G G Q ++ +
Sbjct: 387 WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQ-IHAYA 445
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
L ++ +VD+ + + + MP + + + W ++AG
Sbjct: 446 MKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAG 494
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 214/415 (51%), Gaps = 5/415 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + SN A+ + M+ P +TF L+AC + G+ H+ ++K+
Sbjct: 289 MISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSS 348
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +L+ +Y G + +A +F ++ D + +SW +++SG++ G EA+ +
Sbjct: 349 YYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYH 408
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G KPD +++ ++ A + G+ IH Y + G ++ V SLVD+YAK
Sbjct: 409 EMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFC 468
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M+ +FD+MP+KD+VSW+++I G+A NG AL++F +Q E + + + +L
Sbjct: 469 SMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILL 528
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+ L + S++ R + LS+ VL ++D+Y +CG + A ++F ++ KD V
Sbjct: 529 ACSGLKLISSVKEIHSYIIR-KGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVS 587
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++S NG A +F +++ G++P+ + V +L + +G++ +
Sbjct: 588 WTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLI 647
Query: 361 RV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R F L + +VD+ R G L+++ + + + ++W +++ +H
Sbjct: 648 RKGFVLEGSLA--STLVDMYARCGTLEKSRNVFNFI-RNKDLVLWTSMINAYGMH 699
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/587 (41%), Positives = 361/587 (61%), Gaps = 35/587 (5%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVH----CGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
H+ +++ + CD F + L+ V + A ++F I + N+ + A+I G+
Sbjct: 37 HAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHSG 96
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
N ++A + + + +GL PD+ + ++ +CT+L +S HG++ + G ++V+V
Sbjct: 97 SKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYV 156
Query: 169 ATSLVDLYA-------------------------------KCGNMEKARRVFDQMPEKDI 197
SLV +YA KCG++E AR++FDQMPEK++
Sbjct: 157 QNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNL 216
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF 257
V+WS+MI GYA N +A+++F +Q + ++ MV V+S+CA LGALELG A +
Sbjct: 217 VTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDY 276
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ +N N +LGT L+DMYA+CG + +A VF ++ ++D + W A+++GL+M+GY + +
Sbjct: 277 VVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERS 336
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
F + + G+ P TF +L C+H GLV+ G Q F SM R + P +EHYGCMVD
Sbjct: 337 LKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVD 396
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGN 437
LLGR+G+L+EA + MP++PNA VWGALL CR+HK ++ E V LI L P +SG
Sbjct: 397 LLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGY 456
Query: 438 YVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKI 497
YVLLSNIY+ + +W ++R MM KG++K G S +E+DG VH+F +GD+SHP +KI
Sbjct: 457 YVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKI 516
Query: 498 YSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRI 557
+E+ +++AAG+ T LFDI+EEEK+ L HSEKLA+AFG++ + IRI
Sbjct: 517 ERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRI 576
Query: 558 AKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLRVC DCH A KLISK+ GRE+IVRD NRFH F +G CSC D+W
Sbjct: 577 VKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 181/339 (53%), Gaps = 35/339 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG + A FY + +G LP N TFPF++K+C + H +G ++H I+K G
Sbjct: 90 MIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHG 149
Query: 61 LDCDEFVKTSLLNLYV-------------------------------HCGYLADALKVFD 89
+ D +V+ SL+++Y CG + A K+FD
Sbjct: 150 FEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFD 209
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+P+KN+V+W+ +ISGY + ++A+ +F+ L +G++ + +V V+++C LG L
Sbjct: 210 QMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALEL 269
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ H YV + G N+ + T+LVD+YA+CG+++KA VF+ +PE+D +SW+++I G A
Sbjct: 270 GERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAM 329
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+G+ + +L F M L P T VLSAC+ G +E G M+R+ + P L
Sbjct: 330 HGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRV-EPRL 388
Query: 270 GT--TLIDMYAKCGRMAQACKVFREMKDKDQV-VWNAVV 305
++D+ + G++ +A + +M K VW A++
Sbjct: 389 EHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALL 427
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/635 (38%), Positives = 372/635 (58%), Gaps = 32/635 (5%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
I G+ + A+ Y M + + N TF +L C++ LG + + I+K G
Sbjct: 109 ISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFG 168
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV----------------------- 97
D FV + L+++Y G + DA + FD++P++NVV
Sbjct: 169 FGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFC 228
Query: 98 --------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
SWT +I+G + G EA++MFR + G D F+ VLTAC L L
Sbjct: 229 GLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGE 288
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
K IH YV NVFV ++LVD+Y+KC +++ A VF +MP+K+++SW++M+ GY
Sbjct: 289 GKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQ 348
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
NGF +EA+ +F+ MQR ++P+ +T+ V+S+CA+L +LE G + +S +
Sbjct: 349 NGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITV 408
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
LI +Y KCG + ++F EM +D+V W A+++G + G G+F ++ G+
Sbjct: 409 SNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGL 468
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+P+G TF+G+L C+ AGLV++G Q+F SM + + P+++H C++DLLGR+G+L+EA
Sbjct: 469 KPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEAR 528
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
I +MP P+ + W LL+ CR+H ++ + + LIALEP N +YVLLS++Y++
Sbjct: 529 NFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKG 588
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
KW+ A++R M DK ++K G SW++ G VH F D S P +IY++L++L K+
Sbjct: 589 KWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMI 648
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
G+VP VL D+EE EK L HSEKLA+AFGLI P IR+ KNLRVCGDCH
Sbjct: 649 EEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHN 708
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A K ISKIT REI+VRD RFH F +G+CSC DFW
Sbjct: 709 ATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 225/502 (44%), Gaps = 67/502 (13%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +LK C + + H LI+K + F+ +L+ Y G LA A VFD IP
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 93 DKNVVSWTAI-------------------------------ISGYINEGNLEEAINMFRR 121
N+ SW I ISGY N G+ +A+ +++
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 122 LLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L + + + +L C++ + + I+G + + G G +VFV + LVD+Y K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 181 NMEKARRVFDQMPEKDIV-------------------------------SWSSMIQGYAS 209
+ A+R FD+MPE+++V SW+ MI G
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
NG +EALDMF M+ + +T VL+AC SL AL G +++ R + N +
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
G+ L+DMY+KC + A VF+ M K+ + W A++ G NG+ + A +F ++++ G+
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+P+ T ++ C + ++EG Q F+ + V L I ++ L G+ G + +H
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALITLYGKCGSTENSH 426
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEPWNSGNYVLLSNIYSA 447
L M + + + W ALLAG K + + +++A L+P +LS A
Sbjct: 427 RLFTEMNIR-DEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRA 485
Query: 448 SHKWNDAAKIRSMMGDKGIQKI 469
SM+ + GI I
Sbjct: 486 GLVEKGLQYFESMIKEHGIMPI 507
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 168/319 (52%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + N + A++ + MR GF FTF VL AC G + H+ +++
Sbjct: 241 MITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTD 300
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV ++L+++Y C + A VF +P KNV+SWTA++ GY G EEA+ +F
Sbjct: 301 HKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFF 360
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++PD F++ V+++C L L H +G + V+ +L+ LY KCG
Sbjct: 361 EMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCG 420
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ E + R+F +M +D VSW++++ GYA G E + +F M LKP+ T +GVLS
Sbjct: 421 STENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLS 480
Query: 241 ACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G +E G+ + S ++ + + T +ID+ + GR+ +A M D
Sbjct: 481 ACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDV 540
Query: 299 VVWNAVVSGLSMNGYVKVA 317
V W ++S ++G +++
Sbjct: 541 VGWATLLSSCRVHGDMEIG 559
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/544 (45%), Positives = 343/544 (63%), Gaps = 34/544 (6%)
Query: 95 NVVSWTAIISGYINEGNLEEAINMF--RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
N+ ++ A++ + I+ F + +L PD ++ VL AC L + +
Sbjct: 89 NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCG-------------------------------N 181
+H +V + G N+FV SLVDLY K G
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLS 240
++KAR VFD M EK++VSWS+MI GYA N +A+++F MQ E L P T+V VLS
Sbjct: 209 VDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLS 268
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LGAL+LG W F+ RN+ LG L DMYAKCG + +A VF EM ++D +
Sbjct: 269 ACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVIS 328
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+ ++ GL+M GY AF F ++ + G++PN +F+GLL CTHAGLVD+G ++F+ M
Sbjct: 329 WSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMP 388
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+V+ +TP IEHYGC+VDLL R+G+LD+A LI SMPM+PN IVWGALL GCR++K +
Sbjct: 389 QVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERG 448
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V+ +++ L+ +SG+ V L+N+Y++ + +DAA R M D K GCSW+E++
Sbjct: 449 ERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNS 508
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V+EF +GD+SHP S +IYS + EL K+K AG+ P TD V+ +I+EEEK+ L+ HSEKL
Sbjct: 509 VYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKL 568
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
ALAFGLI T+ IRI KNLRVC DCH+AIK+ISKI REI+VRD +RFH F +G CSC
Sbjct: 569 ALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCSC 628
Query: 601 KDFW 604
D+W
Sbjct: 629 NDYW 632
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 175/353 (49%), Gaps = 56/353 (15%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPT-----NFTFPFVLKACAREHDFQLGVRSHSL 55
+++ F ++ + I ++N N+ LP +TF VLKACA G + H
Sbjct: 96 LLKAFSQHNAWHTTISYFN---NQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCF 152
Query: 56 IVKAGLDCDEFVKTSLLNLY--VHCGYLADAL---------------------------- 85
+ K G + + FV+ SL++LY V C +A L
Sbjct: 153 VTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKA 212
Query: 86 -KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQ 143
VFD + +KN+VSW+ +ISGY +AI +FR++ H G L P+ ++V VL+AC
Sbjct: 213 RMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAH 272
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
LG L KWIH ++ +F+ +L D+YAKCG + +A+ VF +M E+D++SWS +
Sbjct: 273 LGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSII 332
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I G A G+ EA + F M + L+P + +G+L+AC G ++ G+ M +
Sbjct: 333 IMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQ--- 389
Query: 264 LSNPVLGTT--------LIDMYAKCGRMAQACKVFREMKDKDQV-VWNAVVSG 307
V G T ++D+ ++ GR+ QA + M + V VW A++ G
Sbjct: 390 ----VYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 438
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 128/303 (42%), Gaps = 39/303 (12%)
Query: 167 FVATSLVDLYAKCGNMEKARRVFDQ-MPEKDIVSWSSMIQGYASNGFPKEALDMFYN--M 223
+A + + + GN+ + +F+ + +I +++++++ ++ + + F N +
Sbjct: 59 IIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLV 118
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
P+ YT VL ACA L + G F+ + SN + +L+D+Y K G
Sbjct: 119 LPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCN 178
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF-GQLEK---------------- 326
A K+F EM +D V WN ++SG +G V A VF G +EK
Sbjct: 179 CIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNE 238
Query: 327 ---------------CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G+ PN T V +L C H G +D G+ + + R + +
Sbjct: 239 KYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGK-WIHRFIRRNKIEVGLFL 297
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--A 429
+ D+ + G + EA + M E + I W ++ G ++ + A + ++I
Sbjct: 298 GNALADMYAKCGCVLEAKGVFHEM-HERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDG 356
Query: 430 LEP 432
LEP
Sbjct: 357 LEP 359
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/573 (42%), Positives = 360/573 (62%), Gaps = 1/573 (0%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ VL++C G + H ++ +GL D + T L++LY CG + A ++FD +P
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
+NV W +I Y +G E AI ++R ++ G++PD+F+ L AC L DL T +
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGRE 184
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+H V G ++FV LVD+YAKCG ++ AR VFD++ +D V W+SMI Y NG
Sbjct: 185 VHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGR 244
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
P EAL + +M + P T+V +SA A AL G F R F L T+
Sbjct: 245 PMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTS 304
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE-KCGIQP 331
L+DMYAK G + A +F ++ ++ V WNA++ G M+G+ A +F ++ + + P
Sbjct: 305 LVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTP 364
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ TFVG+L C H G+V E ++FF M V+S+ P ++H+ C+VD+LG +G+ +EA++L
Sbjct: 365 DNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDL 424
Query: 392 IKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKW 451
IK MPM+P++ +WGALL GC++HK +L E L +LI LEP ++GNYVLLSNIY+ S KW
Sbjct: 425 IKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKW 484
Query: 452 NDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAA 511
AA++R +M ++G++KI GCSW+E+ G H FLVGD SHP S +IY +L+ L + A
Sbjct: 485 EKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDA 544
Query: 512 GFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAI 571
G++P T V D+ ++EK+ + HSE+LA+AFGLI+T + + KNLRVC DCH I
Sbjct: 545 GYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVI 604
Query: 572 KLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KLIS+I REII+RD NR+H F+ G CSCKD+W
Sbjct: 605 KLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 174/346 (50%), Gaps = 21/346 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + + + AI+ Y M + G P NFT+P LKACA D + G H ++
Sbjct: 134 LIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTH 193
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV L+++Y CG + DA VFD I ++ V W ++I+ Y G EA+++ R
Sbjct: 194 WGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCR 253
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ P ++V ++A L + +HG+ G R + TSLVD+YAK G
Sbjct: 254 DMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSG 313
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVL 239
++ AR +F+Q+ ++++VSW++MI GY +G EAL +F M+ E + P+ T VGVL
Sbjct: 314 WVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVL 373
Query: 240 SACASLGALELGVWASSFMERNEFLS--------NPVLG--TTLIDMYAKCGRMAQACKV 289
SAC G ++ E EF P + T L+D+ GR +A +
Sbjct: 374 SACNHGGMVK---------EAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDL 424
Query: 290 FREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+ M D +W A+++G ++ V++ +L + + GN
Sbjct: 425 IKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGN 470
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/640 (37%), Positives = 364/640 (56%), Gaps = 36/640 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+ + A E Y M G P TF +L +C G R HS I + G
Sbjct: 251 IIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERG 310
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG-----NLEEA 115
L+ D V +L+ +Y C + DA + FD + ++V+SW+A+I+GY G +L+E
Sbjct: 311 LETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEV 370
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-------------- 161
+ R+ G+ P+ + + +L AC+ G L + IH +++ G
Sbjct: 371 FQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNM 430
Query: 162 -----------------KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
+ +NV SL+ +Y KCG++ A +VF +M +++VSW+ MI
Sbjct: 431 YAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMI 490
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GYA +G + ++ +M+ E +P+ T++ +L AC +L ALE G + +
Sbjct: 491 AGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLE 550
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
S+ V+ T+LI MY+KCG + +A VF ++ ++D V WNA+++G +G A +F ++
Sbjct: 551 SDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRM 610
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
K + PN TF ++ C AGLV EGR+ F M F + P +HYGCMVDLLGR+G+
Sbjct: 611 LKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGR 670
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
L EA E I+ MP EP+ VW ALL C+ H LAE + ++ LEP N+ YV LSNI
Sbjct: 671 LQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNI 730
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+ + +W+D+ K+R +M DKG++K RG S +E+DG +H F+ D +HP + I+++L+ L
Sbjct: 731 YAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEML 790
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
++K AG+ P VL D++E +K+ L HSEKLA+A+GL+ T P IRI KNLRVC
Sbjct: 791 TKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVC 850
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
GDCH A K ISKI REI+ RD NRFH F G+CSC DFW
Sbjct: 851 GDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 232/468 (49%), Gaps = 42/468 (8%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + N+ A + + M++ P TF +LKAC + H+++ +G
Sbjct: 150 MIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASG 209
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D V T+L+ +Y CG ++ A ++F + ++NVVSWTAII L EA ++
Sbjct: 210 METDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYE 269
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L G+ P++ + V +L +C L+ + IH +++E G +V VA +L+ +Y KC
Sbjct: 270 KMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCN 329
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP-KEALD----MFYNMQRENLKPEYYTM 235
++ AR FD+M ++D++SWS+MI GYA +G+ KE+LD + M+RE + P T
Sbjct: 330 CIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTF 389
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA--------- 286
+ +L AC+ GALE G + + + F S+ L T + +MYAKCG + +A
Sbjct: 390 MSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMEN 449
Query: 287 ---------------C-------KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
C KVF EM ++ V WN +++G + +G + F + +
Sbjct: 450 KNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSM 509
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ G QP+ T + +L C ++ G+ ++ + L ++ + + G+
Sbjct: 510 KVEGFQPDRVTIISILEACGALSALERGK-LVHAEAVKLGLESDTVVATSLIGMYSKCGE 568
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLH----KKTDLAEHVLNQLI 428
+ EA + + + + W A+LAG H + DL + +L + +
Sbjct: 569 VTEARTVFDKIS-NRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERV 615
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 210/404 (51%), Gaps = 9/404 (2%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
+ AI+ ++ G L + T+ +++ CA+ F+ G H + + GL D ++ S
Sbjct: 59 LKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNS 118
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+N Y G +A +VF + ++VV+W+++I+ Y + +A + F R+ ++P+
Sbjct: 119 LINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPN 178
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ + +L AC L A+ IH V +G +V VAT+L+ +Y+KCG + A +F
Sbjct: 179 RITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQ 238
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M E+++VSW+++IQ A + EA +++ M + + P T V +L++C + AL
Sbjct: 239 KMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNR 298
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G S + ++ V+ LI MY KC + A + F M +D + W+A+++G +
Sbjct: 299 GRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQ 358
Query: 311 NGY-----VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FS 364
+GY + F + ++ + G+ PN TF+ +L C+ G +++GRQ +S+V F
Sbjct: 359 SGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFE 418
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
++ + ++ + G + EA ++ M N + W +LL
Sbjct: 419 SDRSLQ--TAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLL 459
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 239/542 (44%), Gaps = 81/542 (14%)
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
G L+EAI + + RGL +S + ++ C +L K +H ++E G ++++
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
SL++ Y+K G++ +VF +M +D+V+WSSMI YA N P +A D F M+ N++
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P T + +L AC + LE + ++ + ++ + T LI MY+KCG ++ AC++
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEI 236
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F++MK+++ V W A++ + + + AF ++ ++ + GI PN TFV LL C +
Sbjct: 237 FQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEAL 296
Query: 350 DEGRQFFNSMSR------VFSLTPMIEHY------------------------GCMVDLL 379
+ GR+ + +S V +I Y M+
Sbjct: 297 NRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGY 356
Query: 380 GRSG-----QLDEAHELIKSMPME---PNAIVWGALLAGCRLHKKTDLAEHVLNQL--IA 429
+SG LDE +L++ M E PN + + ++L C +H + + ++ +
Sbjct: 357 AQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVG 416
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
E S + N+Y+ +A ++ S M +K + +W + + GD
Sbjct: 417 FESDRSLQTAIF-NMYAKCGSIYEAEQVFSKMENKNV-----VAWASL--LTMYIKCGDL 468
Query: 490 SHPLSEKIYSKLD------------------------ELATKLKAAGFVPTTDHVLFDIE 525
+ +EK++S++ EL + +K GF P ++ +E
Sbjct: 469 TS--AEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILE 526
Query: 526 E----EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGRE 581
+ H+E + L T +I + CG+ EA + KI+ R+
Sbjct: 527 ACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSK---CGEVTEARTVFDKISNRD 583
Query: 582 II 583
+
Sbjct: 584 TV 585
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/604 (40%), Positives = 356/604 (58%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G V N C+ +++ + M +G + T VL A A + ++G+ L +K G
Sbjct: 175 MITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLG 234
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D++V T L++++ C + A +F I ++VS+ A+ISG+ G E A+ FR
Sbjct: 235 FHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFR 294
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
LL G + S ++V ++ + G L A I G+ ++G V+T+L +Y++
Sbjct: 295 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLN 354
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR++FD+ EK + +W++MI GYA +G + A+ +F M P T+ +LS
Sbjct: 355 EIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILS 414
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LGAL G ++ N + T LIDMYAKCG +++A ++F +K+ V
Sbjct: 415 ACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVT 474
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN ++ G ++GY A +F ++ G QP+ TF+ +L C+HAGLV EG + F++M
Sbjct: 475 WNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMV 534
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P+ EHY CMVD+LGR+GQL++A E I+ MP+EP VWG LL C +HK T+LA
Sbjct: 535 NKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLA 594
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+L L+P N G YVLLSNIYS + AA +R + + + K GC+ +EV+G
Sbjct: 595 RVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGT 654
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
H F+ GD SH + IY+KL+EL K++ G+ T L D+EEEEK+ HSEKL
Sbjct: 655 PHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKL 714
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLITT P IRI KNLRVC DCH A K ISKIT R I+VRD NRFH F +G CSC
Sbjct: 715 AIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSC 774
Query: 601 KDFW 604
D+W
Sbjct: 775 GDYW 778
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 228/451 (50%), Gaps = 10/451 (2%)
Query: 1 MIRGF-VSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
+I+GF S D +I FY + +N P NFT+ F + A D LG+ H+ V
Sbjct: 77 LIKGFSFSPDA--SSISFYTHLLKNTTLSPDNFTYAFAISASP---DDNLGMCLHAHAVV 131
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
G D + FV ++L++LY +A A KVFD +PD++ V W +I+G + ++++ +
Sbjct: 132 DGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQV 191
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F+ ++ +G++ DS ++ VL A ++ ++ I + G + +V T L+ +++K
Sbjct: 192 FKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSK 251
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
C +++ AR +F + + D+VS++++I G++ NG + A+ F + + TMVG+
Sbjct: 252 CEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGL 311
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+ + G L L F ++ + P + T L +Y++ + A ++F E +K
Sbjct: 312 IPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTV 371
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WNA++SG + +G ++A +F ++ PN T +L C G + G+ +
Sbjct: 372 AAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKS-VHQ 430
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ + +L I ++D+ + G + EA +L + E N + W ++ G LH D
Sbjct: 431 LIKSKNLEQNIYVSTALIDMYAKCGNISEASQLF-DLTSEKNTVTWNTMIFGYGLHGYGD 489
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
A + N+++ L + + LS +Y+ SH
Sbjct: 490 EALKLFNEMLHL-GFQPSSVTFLSVLYACSH 519
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/605 (38%), Positives = 368/605 (60%), Gaps = 4/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + F+ AI Y M E P+ TF VL AC+ G + H+LI G
Sbjct: 194 MIAAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRKIHALISSRG 250
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D ++ +LL +Y C L DA K+F +P ++VVSW+A+I+ + +EAI +
Sbjct: 251 TELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYS 310
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++P+ ++ VL AC +GDL + +H + G + T+LVDLY G
Sbjct: 311 KMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYG 370
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG-VL 239
++++AR +FDQ+ +D W+ +I GY+ G L+++ M+ P + V+
Sbjct: 371 SLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVI 430
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACASLGA A S +E + +S+ VL T+L++MY++ G + A +VF +M +D +
Sbjct: 431 SACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTL 490
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W +++G + +G +A G++ ++E G +P+ TF+ +L C+HAGL ++G+Q F S+
Sbjct: 491 AWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISI 550
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+++ P I HY C++DLL R+G+L +A ELI +MP+EPN + W +LL R+HK
Sbjct: 551 QSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKR 610
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A H Q+ L+P + +YVLLSN+++ + A +R+ M +G++K RG SW+EV
Sbjct: 611 ATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVAD 670
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+HEF VGDNSHP ++I+++L L+ K+K AG+VP ++ VL D+ E+EK+ L HSEK
Sbjct: 671 QIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEK 730
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI TAP +RI LR+C DCH A+K IS I REIIVRD++RFH F +G CS
Sbjct: 731 LAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCS 790
Query: 600 CKDFW 604
C D+W
Sbjct: 791 CGDYW 795
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 221/454 (48%), Gaps = 17/454 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIV-KA 59
M+ + N ++ A++ Y M P + VL ACA + G HS I
Sbjct: 95 MLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTK 151
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL D ++ SLL +Y CG L DA ++F+ + ++V SW A+I+ Y G+ EEAI ++
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLY 211
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ ++P + VL+AC+ LG L + IH ++ G ++ + +L+ +YA+C
Sbjct: 212 EDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARC 268
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A ++F ++P +D+VSWS+MI +A EA++ + MQ E ++P YYT VL
Sbjct: 269 KCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVL 328
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACAS+G L G + N + V GT L+D+Y G + +A +F +++++D+
Sbjct: 329 LACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEG 388
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG-LLCGCTHAGLVDEGRQFFNS 358
+W ++ G S G+ ++ +++ P ++ C G + RQ +
Sbjct: 389 LWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSD 448
Query: 359 MSRVFSLTPMIEHY---GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
+ MI + +V++ R G L+ A ++ M + + W L+AG H
Sbjct: 449 I----EADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIAGYAKHG 503
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+ LA + ++ LE + +Y+ SH
Sbjct: 504 EHGLALGLYKEM-ELEGAEPSELTFMVVLYACSH 536
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 178/347 (51%), Gaps = 11/347 (3%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F+ ++ Y CG +A A FD I KN SW ++++ Y G+ A+++++R+
Sbjct: 59 FLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM--- 115
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN-EAGKGRNVFVATSLVDLYAKCGNMEK 184
L+P+ VL AC + L K IH ++ G +V + SL+ +YAKCG++E
Sbjct: 116 DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLED 175
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
A+R+F++M + + SW++MI YA +G +EA+ ++ +M +++P T VLSAC++
Sbjct: 176 AKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSN 232
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
LG L+ G + + + L L+ MYA+C + A K+F+ + +D V W+A+
Sbjct: 233 LGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAM 292
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS-MSRVF 363
++ + A + +++ G++PN TF +L C G + GR + + +
Sbjct: 293 IAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGY 352
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+T + + +VDL G LDEA L + + W L+ G
Sbjct: 353 KIT--LVNGTALVDLYTSYGSLDEARSLFDQIENRDEGL-WTVLIGG 396
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 161/312 (51%), Gaps = 24/312 (7%)
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
A Q DL + + IH ++ A NVF+ +V Y KCG++ AR FD + K+ S
Sbjct: 33 ALRQCQDLESVRQIHDRISGAASA-NVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYS 91
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W SM+ YA NG + ALD++ +R +L+P VL ACAS+ ALE G S +
Sbjct: 92 WGSMLTAYAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRIS 148
Query: 260 RNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ L + +L +L+ MYAKCG + A ++F M + WNA+++ + +G+ + A
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAI 208
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMVD 377
++ E ++P+ TF +L C++ GL+D+GR+ + SR L +++ ++
Sbjct: 209 RLY---EDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQN--ALLT 263
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN-----QLIALEP 432
+ R LD+A ++ + +P + + W A++A +TDL + + QL + P
Sbjct: 264 MYARCKCLDDAAKIFQRLPRR-DVVSWSAMIAA---FAETDLFDEAIEFYSKMQLEGVRP 319
Query: 433 WNSGNYVLLSNI 444
NY +++
Sbjct: 320 ----NYYTFASV 327
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/639 (39%), Positives = 371/639 (58%), Gaps = 35/639 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F + AI Y S+R G P N F V KAC D H ++ G
Sbjct: 103 LISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCG 162
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D F+ +L++ Y C + A +VFDD+ K+VVSWT++ S Y+N G + +F
Sbjct: 163 MMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFC 222
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+KP+S ++ +L AC++L DL + + IHG+ G NVFV ++LV LYA+C
Sbjct: 223 EMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCL 282
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASN------------------------------ 210
++++AR VFD MP +D+VSW+ ++ Y +N
Sbjct: 283 SVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIG 342
Query: 211 -----GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
G ++A++M MQ KP T+ L AC+ L +L +G ++ R+ +
Sbjct: 343 GCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIG 402
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ T L+ MYAKCG + + VF + KD V WN ++ +M+G + +F +
Sbjct: 403 DLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESML 462
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
+ GI+PN TF G+L GC+H+ LV+EG Q FNSM R + P HY CMVD+ R+G+L
Sbjct: 463 QSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRL 522
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
EA+E I+ MPMEP A WGALL CR++K +LA+ N+L +EP N GNYV L NI
Sbjct: 523 HEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNIL 582
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ W++A++ R +M ++GI K GCSW++V VH F+VGD ++ S+KIY+ LDEL
Sbjct: 583 VTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELG 642
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
K+K+AG+ P TD+VL DI++EEK L HSEKLA+AFG++ + IR+ KNLR+CG
Sbjct: 643 EKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICG 702
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH AIK +SK+ G IIVRD+ RFH F G+CSC+D W
Sbjct: 703 DCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 143/292 (48%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
LL ++ G A ++FD+IP + + + +IS + G EAI ++ L RG+KP
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ + V AC GD S K +H G + F+ +L+ Y KC +E ARRVFD
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFD 191
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+ KD+VSW+SM Y + G P+ L +F M +KP T+ +L AC+ L L+
Sbjct: 192 DLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKS 251
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G F R+ + N + + L+ +YA+C + QA VF M +D V WN V++
Sbjct: 252 GRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFT 311
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
N +F Q+ G++ + T+ ++ GC G ++ + M +
Sbjct: 312 NREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNL 363
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/605 (38%), Positives = 368/605 (60%), Gaps = 4/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + F+ AI Y M E P+ TF VL AC+ G + H+LI G
Sbjct: 195 MIAAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRKIHALISSRG 251
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D ++ +LL +Y C L DA K+F +P ++VVSW+A+I+ + +EAI +
Sbjct: 252 TELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYS 311
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++P+ ++ VL AC +GDL + +H + G + T+LVDLY G
Sbjct: 312 KMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYG 371
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG-VL 239
++++AR +FDQ+ +D W+ +I GY+ G L+++ M+ P + V+
Sbjct: 372 SLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVI 431
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACASLGA A S +E + +S+ VL T+L++MY++ G + A +VF +M +D +
Sbjct: 432 SACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTL 491
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W +++G + +G +A G++ ++E G +P+ TF+ +L C+HAGL ++G+Q F S+
Sbjct: 492 AWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISI 551
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+++ P I HY C++DLL R+G+L +A ELI +MP+EPN + W +LL R+HK
Sbjct: 552 QSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKR 611
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A H Q+ L+P + +YVLLSN+++ + A +R+ M +G++K RG SW+EV
Sbjct: 612 ATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVAD 671
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+HEF VGDNSHP ++I+++L L+ K+K AG+VP ++ VL D+ E+EK+ L HSEK
Sbjct: 672 QIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEK 731
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI TAP +RI LR+C DCH A+K IS I REIIVRD++RFH F +G CS
Sbjct: 732 LAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCS 791
Query: 600 CKDFW 604
C D+W
Sbjct: 792 CGDYW 796
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 178/348 (51%), Gaps = 12/348 (3%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F+ ++ Y CG +A A FD I KN SW ++++ Y G+ A+++++R+
Sbjct: 59 FLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM--- 115
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN-EAGKGRNVFVATSLVDLYAKCGNMEK 184
L+P+ VL AC + L K IH ++ G +V + SL+ +YAKCG++E
Sbjct: 116 DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLED 175
Query: 185 ARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
A+R+F++M + + SW++MI YA +G +EA+ ++ +M +++P T VLSAC+
Sbjct: 176 AKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACS 232
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+LG L+ G + + + L L+ MYA+C + A K+F+ + +D V W+A
Sbjct: 233 NLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSA 292
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS-MSRV 362
+++ + A + +++ G++PN TF +L C G + GR + +
Sbjct: 293 MIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNG 352
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ +T + + +VDL G LDEA L + + W L+ G
Sbjct: 353 YKIT--LVNGTALVDLYTSYGSLDEARSLFDQIENRDEGL-WTVLIGG 397
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 162/313 (51%), Gaps = 25/313 (7%)
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
A Q DL + + IH ++ A NVF+ +V Y KCG++ AR FD + K+ S
Sbjct: 33 ALRQCQDLESVRQIHDRISGAASA-NVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYS 91
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W SM+ YA NG + ALD++ +R +L+P VL ACAS+ ALE G S +
Sbjct: 92 WGSMLTAYAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRIS 148
Query: 260 RNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV-VWNAVVSGLSMNGYVKVA 317
+ L + +L +L+ MYAKCG + A ++F M + V WNA+++ + +G+ + A
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEA 208
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMV 376
++ E ++P+ TF +L C++ GL+D+GR+ + SR L +++ ++
Sbjct: 209 IRLY---EDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQN--ALL 263
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN-----QLIALE 431
+ R LD+A ++ + +P + + W A++A +TDL + + QL +
Sbjct: 264 TMYARCKCLDDAAKIFQRLPRR-DVVSWSAMIAA---FAETDLFDEAIEFYSKMQLEGVR 319
Query: 432 PWNSGNYVLLSNI 444
P NY +++
Sbjct: 320 P----NYYTFASV 328
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/519 (43%), Positives = 330/519 (63%)
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
K+F+ +P+K++VSW II+G G E + M R + LKPDSF++ VL +
Sbjct: 255 KIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENV 314
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D+S K IHG G V+VA+SL+D+YAKC + + RVF + E+D +SW+S+I
Sbjct: 315 DISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIA 374
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
G NG E L F M +KP+ Y+ ++ ACA L L LG ++ RN F
Sbjct: 375 GCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 434
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
N + ++L+DMYAKCG + A ++F M+ +D V W A++ G +++G+ A +F Q++
Sbjct: 435 NIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMK 494
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
GI+PN F+ +L C+HAGLVDE ++FNSM+ F + P +EHY + DLLGR+G+L
Sbjct: 495 TEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRL 554
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
+EA++ I MP+ P VW LL+ CR+HK D+AE V N+++ ++P N+G Y+LL+NIY
Sbjct: 555 EEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIY 614
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
SA+ +W +AAK R+ + GI+K CSW+EV V+ F+ GD SHP EKI ++ L
Sbjct: 615 SAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLM 674
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
++ G+VP T V D+EEE+K+Y + HSE+LA+ FG+I T IR+ KNLRVC
Sbjct: 675 ELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCT 734
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH A K ISKI GREI+VRDN+RFH F G+CSC D+W
Sbjct: 735 DCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 143/249 (57%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G N + + M P +FT VL A D G H ++ G
Sbjct: 271 IIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQG 330
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + +V +SL+++Y C + D+ +VF + +++ +SW +II+G + G +E + FR
Sbjct: 331 LDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFR 390
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L +KP S+S ++ AC L L K +HGY+ G N+F+A+SLVD+YAKCG
Sbjct: 391 QMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCG 450
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ AR++FD+M +D+VSW++MI G A +G +A+++F M+ E ++P Y + VL+
Sbjct: 451 NIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLT 510
Query: 241 ACASLGALE 249
AC+ G ++
Sbjct: 511 ACSHAGLVD 519
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 205/472 (43%), Gaps = 64/472 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + S+ ++ + M G P + FP VLKACA D LG H I++ G
Sbjct: 79 VIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVG 138
Query: 61 LDCDEFVKTSLLNLYVHCGYLAD-------ALKVFDDIPDKNVVSWTA-IISGYINEGNL 112
LD D + +L+N+Y +L A +V D++ ++ TA ++ G N+G
Sbjct: 139 LDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVG--NQGRK 196
Query: 113 EEAINMFR------------RLLHRGLKPDSFSIVRVLTACT---QLGDLSTAKWIHGYV 157
I F ++L KP S R + AC Q+ D+S +
Sbjct: 197 VSDIEAFNYDVSCRSREFEAQVLEIDYKPRSE--YREMEACNLGQQIKDISHSM------ 248
Query: 158 NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+++ R++F+ MPEKD+VSW+++I G A NG E L
Sbjct: 249 -----------------------SVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETL 285
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
M M NLKP+ +T+ VL A + G R + + ++LIDMY
Sbjct: 286 TMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMY 345
Query: 278 AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
AKC R+ + +VF + ++D + WN++++G NG F Q+ I+P +F
Sbjct: 346 AKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFS 405
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
++ C H + G+Q ++R I +VD+ + G + A ++ M +
Sbjct: 406 SIMPACAHLTTLHLGKQLHGYITR-NGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRL 464
Query: 398 EPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEPWNSGNYVLLSNIYSA 447
+ + W A++ GC LH A + Q+ +EP NYV + +A
Sbjct: 465 R-DMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEP----NYVAFMAVLTA 511
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 157/349 (44%), Gaps = 34/349 (9%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y H L D+L++F+ + ++W ++I Y + G +++ F +L GL PD
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR------ 187
VL AC L DL+ + +HGY+ G +++ +L+++Y+K ++K+ R
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 188 -VFDQMPEKD-IVSWSSMIQGYASNGFPKEALDMF-YNMQRENLKPEYYTMVGVLSACAS 244
V D+M E+ V +S++ G + G ++ F Y++ +C S
Sbjct: 171 QVLDEMTERTRSVRTASVLVG--NQGRKVSDIEAFNYDV-----------------SCRS 211
Query: 245 LGALELGVWASSFMERNEFLSNPV--LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
E V + R+E+ LG + D+ + + K+F M +KD V WN
Sbjct: 212 -REFEAQVLEIDYKPRSEYREMEACNLGQQIKDI-SHSMSVDSVRKIFEMMPEKDLVSWN 269
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
+++G + NG + ++ ++P+ T +L + +G++ R
Sbjct: 270 TIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQ 329
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
L + ++D+ + ++ +++ + ++ E + I W +++AGC
Sbjct: 330 -GLDAEVYVASSLIDMYAKCTRVVDSYRVF-TLLTERDGISWNSIIAGC 376
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/595 (39%), Positives = 364/595 (61%), Gaps = 4/595 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
AI+ + M G+ P FT V+ ACA LG + HS ++ GL D V L+N
Sbjct: 255 AIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLIN 314
Query: 74 LYVHC---GYLADALKVFDDIPDKNVVSWTAIISGYINEGNL-EEAINMFRRLLHRGLKP 129
+Y C G + A K+FD I D NV SWTA+I+GY+ +G EEA+++FR ++ + P
Sbjct: 315 MYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIP 374
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
+ F+ L AC L L + + + + G VA SL+ +YA+ G ++ AR+ F
Sbjct: 375 NHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAF 434
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D + EK+++S++++I YA N +EAL++F ++ + + +T +LS AS+G +
Sbjct: 435 DILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIG 494
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + + ++ N + LI MY++CG + A +VF +M+D++ + W ++++G +
Sbjct: 495 KGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFA 554
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G+ A +F ++ + G++PN T++ +L C+H GLV+EG + F SM + P +
Sbjct: 555 KHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRM 614
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
EHY C+VD+LGRSG L EA + I SMP + +A+VW L CR+H +L +H +I
Sbjct: 615 EHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIE 674
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
EP + Y+LLSN+Y++ KW++ + IR M +K + K GCSWVEV+ VH+F VGD
Sbjct: 675 QEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDT 734
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
SHP + +IY +L L+ K+K G+VP D VL D+EEE+K+ L HSEK+A+AFGLI+T
Sbjct: 735 SHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLIST 794
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ IR+ KNLR+CGDCH AIK IS TGREIIVRD NRFH +G CSC ++W
Sbjct: 795 SKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 214/422 (50%), Gaps = 12/422 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ F +N+ A+ + M G+ P + F +AC+ +G ++K G
Sbjct: 139 MVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTG 198
Query: 61 -LDCDEFVKTSLLNLYVHC-GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
L D V L++++V G L A KVF+ +P++N V+WT +I+ + G EAI++
Sbjct: 199 YLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDL 258
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++ G +PD F++ V++AC + L + +H G + V L+++YAK
Sbjct: 259 FLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAK 318
Query: 179 C---GNMEKARRVFDQMPEKDIVSWSSMIQGYASN-GFPKEALDMFYNMQRENLKPEYYT 234
C G+M AR++FDQ+ + ++ SW++MI GY G+ +EALD+F M ++ P ++T
Sbjct: 319 CSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFT 378
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
L ACA+L AL +G + + F S + +LI MYA+ GR+ A K F +
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILF 438
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+K+ + +N V+ + N + A +F ++E G+ + TF LL G G + +G Q
Sbjct: 439 EKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQ 498
Query: 355 FFNSMSRVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+RV + C ++ + R G ++ A ++ + M + N I W +++ G
Sbjct: 499 IH---ARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFA 554
Query: 413 LH 414
H
Sbjct: 555 KH 556
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 172/320 (53%), Gaps = 5/320 (1%)
Query: 1 MIRGFVSNDCF-QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+V + + A++ + M +P +FTF LKACA ++G + + VK
Sbjct: 346 MITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKL 405
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G V SL+++Y G + DA K FD + +KN++S+ +I Y N EEA+ +F
Sbjct: 406 GFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G+ +F+ +L+ +G + + IH V ++G N V +L+ +Y++C
Sbjct: 466 NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRC 525
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+E A +VF+ M +++++SW+S+I G+A +GF +AL++F+ M E ++P T + VL
Sbjct: 526 GNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVL 585
Query: 240 SACASLGALELGVWA--SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK- 296
SAC+ +G + G W S + + ++D+ + G +++A + M K
Sbjct: 586 SACSHVGLVNEG-WKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKA 644
Query: 297 DQVVWNAVVSGLSMNGYVKV 316
D +VW + ++G +++
Sbjct: 645 DALVWRTFLGACRVHGNLEL 664
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 210/430 (48%), Gaps = 11/430 (2%)
Query: 6 VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
++N AI M ++G P T+ LK C R F +G H + ++ L D
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDI-PDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
SL++LY CG A +F + ++++SW+A++S + N A+ F ++
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAKC-GNM 182
G P+ + AC+ +S I G+V + G +V V L+D++ K G++
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
A +VF++MPE++ V+W+ MI G+ EA+D+F +M +P+ +T+ GV+SAC
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISAC 281
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC---GRMAQACKVFREMKDKDQV 299
A++ L LG S R+ + +G LI+MYAKC G M A K+F ++ D +
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341
Query: 300 VWNAVVSG-LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
W A+++G + GY + A +F + + PN TF L C + + G Q F
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Query: 359 MSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
++ FS + + ++ + RSG++D+A + + E N I + ++ + +
Sbjct: 402 AVKLGFSSVNCVAN--SLISMYARSGRIDDARKAFDIL-FEKNLISYNTVIDAYAKNLNS 458
Query: 418 DLAEHVLNQL 427
+ A + N++
Sbjct: 459 EEALELFNEI 468
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/605 (40%), Positives = 364/605 (60%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ N + A+E M+ E G P + T VL ACA +H+ +++
Sbjct: 131 LVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRS 190
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL+ V T++L+ Y CG + A VFD +P KN VSW A+I GY G+ EA+ +F
Sbjct: 191 GLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALF 250
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R++ G+ S++ L AC +LG L +H + G NV V +L+ +Y+KC
Sbjct: 251 NRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKC 310
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A VFD++ + VSW++MI G A NG ++A+ +F MQ EN+KP+ +T+V V+
Sbjct: 311 KRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVI 370
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A A + W + R + + T LIDMYAKCGR+ A +F +++ +
Sbjct: 371 PALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVI 430
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ G +G+ K A +F +++ GI PN TF+ +L C+HAGLVDEGR++F SM
Sbjct: 431 TWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSM 490
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ L P +EHYG MVDLLGR+G+LDEA I+ MPM+P V+GA+L C+LHK +L
Sbjct: 491 KEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVEL 550
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE ++ L P +VLL+NIY+ + W D A++R+ M G+QK G S +++
Sbjct: 551 AEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKN 610
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F G +H +++IYS+L +L ++KA G+VP TD + D+E++ K L HSEK
Sbjct: 611 EIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEK 669
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI TAP I+I KNLRVC DCH A KLIS +TGREII+RD RFH F +G CS
Sbjct: 670 LAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCS 729
Query: 600 CKDFW 604
C D+W
Sbjct: 730 CGDYW 734
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 206/402 (51%), Gaps = 3/402 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ + +M + G P TF +LK CA D G H+ + G+D + T+L N
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL-HRGLKPDSF 132
+Y C ADA +VFD +P ++ V+W A+++GY G A+ M R+ G +PDS
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++V VL AC L+ + H + +G V VAT+++D Y KCG++ AR VFD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
P K+ VSW++MI GYA NG +EAL +F M E + +++ L AC LG L+ G+
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ R SN + LI MY+KC R+ A VF E+ + QV WNA++ G + NG
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ A +F +++ ++P+ T V ++ + R + + S L +
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQAR-WIHGYSIRLHLDQDVYVL 401
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++D+ + G+++ A L S E + I W A++ G H
Sbjct: 402 TALIDMYAKCGRVNIARILFNS-ARERHVITWNAMIHGYGSH 442
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 164/335 (48%), Gaps = 4/335 (1%)
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+L A+ F + G P + +L C GDL+T + +H + G AT
Sbjct: 39 DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LK 229
+L ++YAKC ARRVFD+MP +D V+W++++ GYA NG + A++M MQ E +
Sbjct: 99 ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P+ T+V VL ACA+ AL A +F R+ + T ++D Y KCG + A V
Sbjct: 159 PDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVV 218
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F M K+ V WNA++ G + NG + A +F ++ + G+ + + L C G +
Sbjct: 219 FDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCL 278
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
DEG + + R+ L + ++ + + ++D A + + + W A++
Sbjct: 279 DEGMRVHELLVRI-GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ-VSWNAMIL 336
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
GC + ++ A + ++ LE ++ L+S I
Sbjct: 337 GCAQNGCSEDAVRLFTRM-QLENVKPDSFTLVSVI 370
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/604 (39%), Positives = 366/604 (60%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V +DC A+ + M+ G P FT LKACA +LG + HS ++K
Sbjct: 255 IIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMD 314
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D F L+++Y C + DA + +D +P K++++W A+ISGY G+ +A+++F
Sbjct: 315 AHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFS 374
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + + ++ VL + L + K IH ++G + +V SL+D Y KC
Sbjct: 375 KMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCN 434
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++++A ++F++ +D+V+++SMI Y+ G +EAL ++ MQ ++KP+ + +L+
Sbjct: 435 HIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLN 494
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+L A E G + F+ + +L++MYAKCG + A + F E+ ++ V
Sbjct: 495 ACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVS 554
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A++ G + +G+ K A +F Q+ + G+ PN T V +LC C HAGLV+EG+Q+F M
Sbjct: 555 WSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKME 614
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+F + P EHY CM+DLLGRSG+L+EA EL+ S+P E + VWGALL R+HK +L
Sbjct: 615 VMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELG 674
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ L LEP SG +VLL+NIY+++ W + AK+R M D ++K G SW+E+
Sbjct: 675 QKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDK 734
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V+ F+VGD SH S++IY+KLD+L L AG+ + + ++++ EK+ L HSEKL
Sbjct: 735 VYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKL 794
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI T P IR+ KNLR+C DCH K + KI REIIVRD NRFH F +GSCSC
Sbjct: 795 AVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSC 854
Query: 601 KDFW 604
D+W
Sbjct: 855 GDYW 858
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 216/430 (50%), Gaps = 14/430 (3%)
Query: 5 FVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCD 64
+V ++ A+ + M G +P F+ +L ACA + LG + H L++K GLD D
Sbjct: 158 YVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLD 217
Query: 65 EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
+F +L+++Y G + A+ VF DI +VVSW AII+G + + A+ + +
Sbjct: 218 QFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKG 277
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G +P+ F++ L AC +G + +H + + ++F A LVD+Y+KC M+
Sbjct: 278 SGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDD 337
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
ARR +D MP+KDI++W+++I GY+ G +A+ +F M E++ T+ VL + AS
Sbjct: 338 ARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVAS 397
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
L A+++ + ++ S+ + +L+D Y KC + +A K+F E +D V + ++
Sbjct: 398 LQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSM 457
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF------FNS 358
++ S G + A ++ Q++ I+P+ LL C + ++G+Q F
Sbjct: 458 ITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGF 517
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M +F+ ++ Y + G +++A +P + W A++ G H
Sbjct: 518 MCDIFASNSLVNMY-------AKCGSIEDADRAFSEIP-NRGIVSWSAMIGGYAQHGHGK 569
Query: 419 LAEHVLNQLI 428
A + NQ++
Sbjct: 570 EALRLFNQML 579
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 203/400 (50%), Gaps = 5/400 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+V N + A+ +N M G FTFP VLKAC+ + D +G + H + V G
Sbjct: 53 LLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTG 112
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+ +Y CG L D+ ++F I ++NVVSW A+ S Y+ EA+ +F+
Sbjct: 113 FESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFK 172
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ P+ FSI +L AC L + + IHG + + G + F A +LVD+Y+K G
Sbjct: 173 EMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAG 232
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E A VF + D+VSW+++I G + AL + M+ +P +T+ L
Sbjct: 233 EIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALK 292
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA++G ELG S + + + S+ L+DMY+KC M A + + M KD +
Sbjct: 293 ACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIA 352
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF--FNS 358
WNA++SG S G A +F ++ I N T +L + +Q +
Sbjct: 353 WNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISI 412
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
S ++S +I ++D G+ +DEA ++ + E
Sbjct: 413 KSGIYSDFYVIN---SLLDTYGKCNHIDEASKIFEERTWE 449
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 193/358 (53%), Gaps = 2/358 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ ++K G D ++ L+ LY C A K+ D+ + +VVSW++++SGY+ G +
Sbjct: 4 HAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFV 63
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
EEA+ +F + G+K + F+ VL AC+ DL+ + +HG G + FVA +L
Sbjct: 64 EEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTL 123
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
V +YAKCG ++ +RR+F + E+++VSW+++ Y + EA+ +F M R + P
Sbjct: 124 VVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNE 183
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+++ +L+ACA L +LG M + + L+DMY+K G + A VF++
Sbjct: 184 FSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQD 243
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
+ D V WNA+++G ++ +A + +++ G +PN T L C G + G
Sbjct: 244 IAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELG 303
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
RQ +S+ ++ + + + G +VD+ + +D+A SMP + + I W AL++G
Sbjct: 304 RQLHSSLIKMDAHSDLFAAVG-LVDMYSKCEMMDDARRAYDSMP-KKDIIAWNALISG 359
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 142/275 (51%), Gaps = 2/275 (0%)
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+H ++ + G R+ + LV LY+KC AR++ D+ E D+VSWSS++ GY NGF
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+EAL +F M +K +T VL AC+ L +G F S+ + T
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+ MYAKCG + + ++F + +++ V WNA+ S + A G+F ++ + GI PN
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
+ +L C D GR+ M ++ L +VD+ ++G+++ A +
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKM-GLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ + P+ + W A++AGC LH DLA +L+++
Sbjct: 242 QDIA-HPDVVSWNAIIAGCVLHDCNDLALMLLDEM 275
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/669 (38%), Positives = 388/669 (57%), Gaps = 75/669 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+R + + Y M+ G P F +P ++K+ G+ H+ ++K G
Sbjct: 71 MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTG-----GIGFHAHVLKLG 125
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--------------------------- 93
D FV+ +++++Y G + A KVFD+IPD
Sbjct: 126 HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWL 185
Query: 94 ------KNVVSWTAII-------------------------------SGYINEGNLEEAI 116
+NV++WTA++ SGY G EEA+
Sbjct: 186 FDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEAL 245
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F +++ G++PD + V V++AC+ GD A + +++ N FV T+L+D+Y
Sbjct: 246 RLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMY 305
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLKPEYYTM 235
AK G+++ AR++F+ MP +++V+W+SMI GYA NG A+++F M + L P+ TM
Sbjct: 306 AKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTM 365
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
V V+SAC LGALELG W F+ N+ + +I MY++CG M A +VF+EM
Sbjct: 366 VSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMAT 425
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+D V +N ++SG + +G+ A + +++ GI+P+ TF+G+L C+HAGL++EGR+
Sbjct: 426 RDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKV 485
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F S+ P I+HY CMVDLLGR G+L++A ++ MPMEP+A V+G+LL R+HK
Sbjct: 486 FESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHK 540
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
+ +L E N+L LEP NSGN++LLSNIY+++ +W D +IR M G++K G SWV
Sbjct: 541 QVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWV 600
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
E G +H+F+V D SH S+ IY L EL K++ AG++ VL D+EEEEK+ +
Sbjct: 601 EYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGT 660
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+ + L+ + VIR+ KNLRVC DCH AIK+ISK+ GR IIVRDNNRFHCF +
Sbjct: 661 HSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFND 720
Query: 596 GSCSCKDFW 604
G CSCKD+W
Sbjct: 721 GLCSCKDYW 729
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 174/393 (44%), Gaps = 72/393 (18%)
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
+F+ + NV +T+++ Y + + + + M+ ++ G++PD+F + +L G
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAF-VYPILIKSAGTGG 114
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ--------------- 191
+ H +V + G G + FV +++D+YA+ G + AR+VFD+
Sbjct: 115 IG----FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 192 ------------------MPEKDIVSWSSMI----------------------------- 204
MPE+++++W++M+
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 205 --QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
GYA NG +EAL +F M ++P+ T V V+SAC+S G L + +
Sbjct: 231 MLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKR 290
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
N + T L+DMYAK G + A K+F M ++ V WN++++G + NG +A +F
Sbjct: 291 IQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFK 350
Query: 323 QLEKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ + P+ T V ++ C H G ++ G ++ + I + M+ + R
Sbjct: 351 EMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTE-NQIKLSISGHNAMIFMYSR 409
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
G +++A + + M + + + L++G H
Sbjct: 410 CGSMEDAKRVFQEMATR-DVVSYNTLISGFAAH 441
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 158/375 (42%), Gaps = 47/375 (12%)
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
GN + +++H L ++ + ++ CT+L + + H N NVFV
Sbjct: 12 GNFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRL--RAPPHYTHLLFNST-LNPNVFVF 68
Query: 170 TSLVDLYAKCGNMEKARRVFDQMP----EKDIVSWSSMIQ----------------GYAS 209
TS++ Y+ + K +++QM D + +I+ G+ S
Sbjct: 69 TSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGIGFHAHVLKLGHGS 128
Query: 210 NGFPKEA-LDMFYNM-----QRENLK--PEYYTMVGVLSACASLGALELGVWASSFMERN 261
+ F + A +DM+ + R+ P+Y V A A+ G W +
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKV------ADWNAMVSGYWKWESEGQA 182
Query: 262 EFL------SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
++L N + T ++ YAK + A + F M ++ V WNA++SG + NG +
Sbjct: 183 QWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAE 242
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGC 374
A +F ++ GI+P+ T+V ++ C+ G ++ + L +
Sbjct: 243 EALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVR--TA 300
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWN 434
++D+ + G LD A +L +MP N + W +++AG + ++ +A + ++I +
Sbjct: 301 LLDMYAKFGDLDSARKLFNTMPGR-NVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLT 359
Query: 435 SGNYVLLSNIYSASH 449
++S I + H
Sbjct: 360 PDEVTMVSVISACGH 374
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/605 (40%), Positives = 364/605 (60%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ N + A+E M+ E G P + T VL ACA +H+ +++
Sbjct: 131 LVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRS 190
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL+ V T++L+ Y CG + A VFD +P KN VSW A+I GY G+ EA+ +F
Sbjct: 191 GLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALF 250
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R++ G+ S++ L AC +LG L +H + G NV V +L+ +Y+KC
Sbjct: 251 NRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKC 310
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A VFD++ + VSW++MI G A NG ++A+ +F MQ EN+KP+ +T+V V+
Sbjct: 311 KRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVI 370
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A A + W + R + + T LIDMYAKCGR+ A +F +++ +
Sbjct: 371 PALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVI 430
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ G +G+ K A +F +++ GI PN TF+ +L C+HAGLVDEGR++F SM
Sbjct: 431 TWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSM 490
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ L P +EHYG MVDLLGR+G+LDEA I+ MPM+P V+GA+L C+LHK +L
Sbjct: 491 KEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVEL 550
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE ++ L P +VLL+NIY+ + W D A++R+ M G+QK G S +++
Sbjct: 551 AEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKN 610
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F G +H +++IYS+L +L ++KA G+VP TD + D+E++ K L HSEK
Sbjct: 611 EIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEK 669
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI TAP I+I KNLRVC DCH A KLIS +TGREII+RD RFH F +G CS
Sbjct: 670 LAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCS 729
Query: 600 CKDFW 604
C D+W
Sbjct: 730 CGDYW 734
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 209/414 (50%), Gaps = 3/414 (0%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
+R + A+ + +M + G P TF +LK CA D G H+ + G+
Sbjct: 31 LRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGI 90
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
D + T+L N+Y C ADA +VFD +P ++ V+W A+++GY G A+ M R
Sbjct: 91 DSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150
Query: 122 LL-HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G +PDS ++V VL AC L+ + H + +G V VAT+++D Y KCG
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR VFD MP K+ VSW++MI GYA NG +EAL +F M E + +++ L
Sbjct: 211 DIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQ 270
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC LG L+ G+ + R SN + LI MY+KC R+ A VF E+ + QV
Sbjct: 271 ACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS 330
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G + NG + A +F +++ ++P+ T V ++ + R + + S
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQAR-WIHGYS 389
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
L + ++D+ + G+++ A L S E + I W A++ G H
Sbjct: 390 IRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS-ARERHVITWNAMIHGYGSH 442
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 164/335 (48%), Gaps = 4/335 (1%)
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+L A+ F + G P + +L C GDL+T + +H + G AT
Sbjct: 39 DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LK 229
+L ++YAKC ARRVFD+MP +D V+W++++ GYA NG + A++M MQ E +
Sbjct: 99 ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P+ T+V VL ACA+ AL A +F R+ + T ++D Y KCG + A V
Sbjct: 159 PDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVV 218
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F M K+ V WNA++ G + NG + A +F ++ + G+ + + L C G +
Sbjct: 219 FDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCL 278
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
DEG + + R+ L + ++ + + ++D A + + + W A++
Sbjct: 279 DEGMRVHELLVRI-GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ-VSWNAMIL 336
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
GC + ++ A + ++ LE ++ L+S I
Sbjct: 337 GCAQNGCSEDAVRLFTRM-QLENVKPDSFTLVSVI 370
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/609 (39%), Positives = 374/609 (61%), Gaps = 10/609 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + + A+E + M GF P +T +L AC F+LG + HSL ++ G
Sbjct: 226 LITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLG 285
Query: 61 LDCDEFVKTSLLNLYV--HCGY-LADALKVFDDIPDKNVVSWTAIISGYINEGNLE-EAI 116
L+ D V L+++Y H G L +A +VF+ +P NV++WTA++SGY+ G+ + + +
Sbjct: 286 LESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVM 345
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F ++L+ G++P+ + +L AC LGD + + IH + ++ V +LV +Y
Sbjct: 346 ILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMY 405
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ G++E+AR FDQ+ EK++VS+S + G + ++ Y ++R L +T
Sbjct: 406 AESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD-----YQIERMELGISTFTFG 460
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
++SA AS+G L G + + F S+ +G +L+ MY++CG + AC+VF EM D
Sbjct: 461 SLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDH 520
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ + W +++SGL+ +GY A +F + G++PN T++ +L C+HAGLV EG++ F
Sbjct: 521 NVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHF 580
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
M + L P +EHY CMVDLLGRSG +++A + I MP + +A+VW LL C+ H
Sbjct: 581 RMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNN 640
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
D+ E N +I LEP + YVLLSN+Y+ + W+ A+IRS+M DK + K +G SW+
Sbjct: 641 MDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMH 700
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
VD +HEF GD SHP +E+IY+KL+ L ++K G+VP T VL D+ +E K+ L H
Sbjct: 701 VDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQH 760
Query: 537 SEKLALAFGLIT-TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
SEK+A+AFGLI+ T+ IRI KNLRVC DCH A+K +SK TGREII+RD+NRFH +
Sbjct: 761 SEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKD 820
Query: 596 GSCSCKDFW 604
G CSC ++W
Sbjct: 821 GECSCGEYW 829
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 188/377 (49%), Gaps = 14/377 (3%)
Query: 45 DFQLG--VRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWT 100
D LG ++ H L + L+ D V SLL LY C +A A VFD +P +++VSWT
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 101 AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC--TQLGDLSTAKWIHGYVN 158
A+ S G EA+ +F L GL P++F++ AC ++L L+ + G V
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGA-VLGLVF 180
Query: 159 EAGK-GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G G +V V +L+D++AK G++ RRVFD + E+ +V W+ +I YA +G+ EA+
Sbjct: 181 KLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAV 240
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
++F +M +P+ YT+ +LSAC LG+ LG S R S+ + L+DMY
Sbjct: 241 ELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMY 300
Query: 278 AKC---GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV-FGQLEKCGIQPNG 333
AK + A +VF M + + W A++SG G + F ++ GI+PN
Sbjct: 301 AKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNH 360
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
T+ +L C + G D GRQ + +L + +V + SG ++EA
Sbjct: 361 ITYSSMLKACANLGDQDSGRQIHTHCVKS-NLADLNVVGNALVSMYAESGSIEEARHAFD 419
Query: 394 SMPMEPNAIVWGALLAG 410
+ E N + + L G
Sbjct: 420 QL-YEKNMVSFSGNLDG 435
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 205/424 (48%), Gaps = 17/424 (4%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQL-GVRSHSLIVKAGL-DCDEFVKTSL 71
A+ + EG LP FT +AC F L G L+ K G D V +L
Sbjct: 136 ALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCAL 195
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
++++ G L +VFD + ++ VV WT +I+ Y G +EA+ +F +L G +PD
Sbjct: 196 IDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQ 255
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN---MEKARRV 188
+++ +L+ACT+LG + +H G + V+ LVD+YAK N + AR V
Sbjct: 256 YTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREV 315
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFP-KEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
F++MP+ ++++W++++ GY G + + +F M E ++P + T +L ACA+LG
Sbjct: 316 FNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGD 375
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
+ G + ++ V+G L+ MYA+ G + +A F ++ +K+ V ++ + G
Sbjct: 376 QDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDG 435
Query: 308 LSM-NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SMSRVFSL 365
N Y Q+E+ + + TF L+ G++ +G++ S+ F
Sbjct: 436 DGRSNTYQDY------QIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGS 489
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
I + +V + R G L +A ++ M + N I W ++++G H A + +
Sbjct: 490 DRAIGN--SLVSMYSRCGYLVDACQVFDEMN-DHNVISWTSMISGLAKHGYAARALELFH 546
Query: 426 QLIA 429
+IA
Sbjct: 547 DMIA 550
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/581 (40%), Positives = 362/581 (62%), Gaps = 3/581 (0%)
Query: 27 LPTNFT-FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADAL 85
L TNF + VL C R+ + G R H+ ++K +++T L+ YV C L DA
Sbjct: 54 LDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDAR 113
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
VFD +P++NVVSWTA+IS Y G +A+++F ++L G +P+ F+ VLT+C
Sbjct: 114 HVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSS 173
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
+ IH ++ + +V+V +SL+D+YAK G + +AR +F +PE+D+VS +++I
Sbjct: 174 GFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIIS 233
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GYA G +EAL++F +QRE ++ Y T VL+A + L AL+ G + + R+E S
Sbjct: 234 GYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPS 293
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG-QL 324
VL +LIDMY+KCG + A ++F + ++ + WNA++ G S +G + +F +
Sbjct: 294 YVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMI 353
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMVDLLGRSG 383
++ ++P+ T + +L GC+H GL D+G F M S S+ P +HYGC+VD+LGR+G
Sbjct: 354 DENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAG 413
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
+++ A E +K MP EP+A +WG LL C +H D+ E V +QL+ +EP N+GNYV+LSN
Sbjct: 414 RVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSN 473
Query: 444 IYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDE 503
+Y+++ +W D +R++M K + K G SW+E+D V+H F D SHP E++ +K+ E
Sbjct: 474 LYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQE 533
Query: 504 LATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRV 563
L+ + K AG+VP VL D++EE+K+ L HSEKLAL FGLI T IR+ KNLR+
Sbjct: 534 LSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRI 593
Query: 564 CGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
C DCH K SKI GRE+ +RD NRFH + G CSC D+W
Sbjct: 594 CVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 189/364 (51%), Gaps = 7/364 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + A+ + M G P FTF VL +C F LG + HS I+K
Sbjct: 130 MISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLN 189
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +V +SLL++Y G + +A +F +P+++VVS TAIISGY G EEA+ +FR
Sbjct: 190 YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFR 249
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RL G++ + + VLTA + L L K +H ++ + V + SL+D+Y+KCG
Sbjct: 250 RLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCG 309
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVL 239
N+ ARR+FD + E+ ++SW++M+ GY+ +G +E L++F M EN +KP+ T++ VL
Sbjct: 310 NLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVL 369
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DK 296
S C+ G + G+ M + P ++DM + GR+ A + ++M +
Sbjct: 370 SGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEP 429
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQF 355
+W ++ S++ + + V QL + I+P N +V L AG ++ R
Sbjct: 430 SAAIWGCLLGACSVHSNLDIGEFVGHQLLQ--IEPENAGNYVILSNLYASAGRWEDVRSL 487
Query: 356 FNSM 359
N M
Sbjct: 488 RNLM 491
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 174/351 (49%), Gaps = 11/351 (3%)
Query: 102 IISGYINEGNLEEAINMFRRLLH---RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
+++ +I++ L EA LLH RGL + VL C + + + +H ++
Sbjct: 32 VLNIHIHDTRLREA------LLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMI 85
Query: 159 EAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALD 218
+ V++ T L+ Y KC ++ AR VFD MPE+++VSW++MI Y+ G+ +AL
Sbjct: 86 KTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALS 145
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
+F M R +P +T VL++C LG S + + + ++ +G++L+DMYA
Sbjct: 146 LFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYA 205
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
K G++ +A +F+ + ++D V A++SG + G + A +F +L++ G+Q N T+
Sbjct: 206 KDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTS 265
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
+L + +D G+Q N + R + + ++D+ + G L A + ++ E
Sbjct: 266 VLTALSGLAALDHGKQVHNHLLRS-EVPSYVVLQNSLIDMYSKCGNLTYARRIFDTL-HE 323
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
I W A+L G H + + N +I + +L+ + SH
Sbjct: 324 RTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSH 374
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/593 (39%), Positives = 365/593 (61%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ +++ Y++M E P+ T+ VL AC + G + H+ IV++ D V T+L
Sbjct: 212 EESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTAL 271
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+Y+ CG DA +VF+ + ++V++W +I G+++ G LEEA F R+L G+ PD
Sbjct: 272 TKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDR 331
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+ VL+AC + G L+ K IH + G +V +L+++Y+K G+M+ AR+VFD+
Sbjct: 332 ATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDR 391
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
MP++D+VSW++++ YA E+ F M ++ +K T + VL AC++ AL+ G
Sbjct: 392 MPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWG 451
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + + L++ + L+ MY KCG + A +VF M +D V WN ++ GL N
Sbjct: 452 KEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQN 511
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G A + ++ G++PN TFV +L C LV+EGR+ F MS+ + + P +H
Sbjct: 512 GRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKH 571
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
Y CMVD+L R+G L EA ++I ++P++P+A +WGALLA CR+H ++ E + LE
Sbjct: 572 YACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLE 631
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P N+G YV LS IY+A+ W D AK+R M ++G++K G SW+E+ G VH F+ D SH
Sbjct: 632 PQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSH 691
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P +++IY++L+ L ++K+ G+VP T V+ D+++E K+ + HSEKLA+A+GLI+T P
Sbjct: 692 PRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPP 751
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI+KNLRVC DCH A K ISKIT REII RD +RFH F G CSC D+W
Sbjct: 752 GTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 217/388 (55%), Gaps = 2/388 (0%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
+ +G ++ + +L++C + D +G + H I++ G+ + ++ +LL LY HCG
Sbjct: 19 LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
+ +A ++FD +K+VVSW +ISGY + G +EA N+F + L+PD F+ V +L+A
Sbjct: 79 VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
C+ L+ + IH V EAG + V +L+ +YAKCG++ ARRVFD M +D VSW
Sbjct: 139 CSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 198
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+++ YA +G+ +E+L ++ M +E ++P T + VLSAC SL ALE G + +
Sbjct: 199 TTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVE 258
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+E+ S+ + T L MY KCG A +VF + +D + WN ++ G +G ++ A G
Sbjct: 259 SEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGT 318
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F ++ + G+ P+ T+ +L C G + G++ ++ L + ++++
Sbjct: 319 FHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAK-DGLVSDVRFGNALINMYS 377
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALL 408
++G + +A ++ MP + + + W LL
Sbjct: 378 KAGSMKDARQVFDRMP-KRDVVSWTTLL 404
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 221/446 (49%), Gaps = 33/446 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ Q A + M+ E P FTF +L AC+ G H +++AG
Sbjct: 100 MISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAG 159
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D V +L+++Y CG + DA +VFD + ++ VSWT + Y G EE++ +
Sbjct: 160 LANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYH 219
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L ++P + + VL+AC L L K IH ++ E+ +V V+T+L +Y KCG
Sbjct: 220 AMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCG 279
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ AR VF+ + +D+++W++MI+G+ +G +EA F+ M E + P+ T VLS
Sbjct: 280 AFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLS 339
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA G L G + ++ +S+ G LI+MY+K G M A +VF M +D V
Sbjct: 340 ACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVS 399
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT-----------HAGLV 349
W ++ + V +F F Q+ + G++ N T++ +L C+ HA +V
Sbjct: 400 WTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVV 459
Query: 350 DEG------------RQFFNSMS-----RVFSLTPM--IEHYGCMVDLLGRSGQLDEA-- 388
G +F S RVF M + + ++ LG++G+ EA
Sbjct: 460 KAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQ 519
Query: 389 -HELIKSMPMEPNAIVWGALLAGCRL 413
+E++KS M PNA + +L+ CR+
Sbjct: 520 RYEVMKSEGMRPNAATFVNVLSACRV 545
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 168/318 (52%), Gaps = 2/318 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRGFV + + A ++ M EG P T+ VL ACAR G H+ K G
Sbjct: 302 MIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDG 361
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D +L+N+Y G + DA +VFD +P ++VVSWT ++ Y + + E+ F+
Sbjct: 362 LVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFK 421
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L +G+K + + + VL AC+ L K IH V +AG ++ V +L+ +Y KCG
Sbjct: 422 QMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCG 481
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A RVF+ M +D+V+W+++I G NG EAL + M+ E ++P T V VLS
Sbjct: 482 SVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLS 541
Query: 241 ACASLGALELGVWASSFMERNE-FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQ 298
AC +E G +FM ++ + ++D+ A+ G + +A V + K
Sbjct: 542 ACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSA 601
Query: 299 VVWNAVVSGLSMNGYVKV 316
+W A+++ ++ V++
Sbjct: 602 AMWGALLAACRIHCNVEI 619
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 165/323 (51%), Gaps = 34/323 (10%)
Query: 123 LHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
LHR G + DS+ V++L +C + DL+ K +H ++ G NV++ +L+ LYA CG+
Sbjct: 19 LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ +AR++FD+ K +VSW+ MI GYA G +EA ++F MQ+E L+P+ +T V +LSA
Sbjct: 79 VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C+S L G + ++ +G LI MYAKCG + A +VF M +D+V W
Sbjct: 139 CSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 198
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF------ 355
+ + +GY + + + + + ++P+ T++ +L C +++G+Q
Sbjct: 199 TTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVE 258
Query: 356 --FNSMSRV-FSLTPMI----------EHYGC-----------MVDLLGRSGQLDEAHEL 391
++S RV +LT M E + C M+ SGQL+EAH
Sbjct: 259 SEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGT 318
Query: 392 IKSMPME---PNAIVWGALLAGC 411
M E P+ + +L+ C
Sbjct: 319 FHRMLEEGVAPDRATYTTVLSAC 341
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%)
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
D+ + R+ + + Y V +L +C L +G + R N + TL+ +Y
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 278 AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
A CG + +A ++F + +K V WN ++SG + G + AF +F +++ ++P+ TFV
Sbjct: 74 AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133
Query: 338 GLLCGCTHAGLVDEGRQF 355
+L C+ +++ GR+
Sbjct: 134 SILSACSSPAVLNWGREI 151
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/655 (38%), Positives = 374/655 (57%), Gaps = 65/655 (9%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACARE-HDFQLGVRSHSLIVKAGLDCD-EFVKTSLL 72
I Y M P FTF F+ K CAR LG H+ + L + + ++
Sbjct: 88 IILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPII 147
Query: 73 NLYVHCGYLADALKVFDDI-------------------------------PDKNVVSWTA 101
++Y G DA + FD+ P +NVV+WT
Sbjct: 148 HMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTG 207
Query: 102 IISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE-- 159
+ISGY G EA++ F +L G+ PD +++ +L+AC QL DL+ +H V +
Sbjct: 208 LISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKR 267
Query: 160 --------------------AGKGRNVFVA----------TSLVDLYAKCGNMEKARRVF 189
G+ R VF A +++D Y K G+++ AR +F
Sbjct: 268 MLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLF 327
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
DQM + D+++++S+I GY G +EAL +F M+R L + +TMVG+L+A ASLGAL
Sbjct: 328 DQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALP 387
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + +E+ + LGT L+DMY KCGR+ +A F++M +D W+A++ GL+
Sbjct: 388 QGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLA 447
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
NG K A F ++ G N T++ +L C+H+ L+DEGR +F+ M + ++ P I
Sbjct: 448 FNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQI 507
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
EHYGCM+DLLGRSG LDEA +L+++MPM+PNA++W ++L+ CR+HK DLA++ + L+
Sbjct: 508 EHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLK 567
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
LEP YV + NIY S +W DA+KIR +M +G++K G S + V G VH+F+VGD
Sbjct: 568 LEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDR 627
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
SHP +I ++E+ +LK+AG+ P T + D++EEEK+ L HSEKLA+AFGL++
Sbjct: 628 SHPQIAEIVVMMEEIGRRLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSL 687
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
AP + I KNLRVC DCH AIKLIS++ REIIVRD +RFH F G CSC DFW
Sbjct: 688 APNLPVHIIKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 172/354 (48%), Gaps = 40/354 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ A++ +NSM ++G P T +L AC + D G H L+
Sbjct: 208 LISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKR 267
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKV--------------------------------F 88
+ + + +L+++Y CG A +V F
Sbjct: 268 MLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLF 327
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
D + D +V+++ ++I+GYI+ G L EA+ +F ++ GL D+F++V +LTA LG L
Sbjct: 328 DQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALP 387
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+ +H + + R+V++ T+L+D+Y KCG +E+A F QM +D+ +WS+MI G A
Sbjct: 388 QGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLA 447
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN-- 266
NG K AL+ F+ M+ + T + VL+AC+ L+ G + + L N
Sbjct: 448 FNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEG---RLYFDEMRLLHNIR 504
Query: 267 PVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
P + +ID+ + G + +A + + M + V+W +++S ++ V +A
Sbjct: 505 PQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLA 558
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 152/349 (43%), Gaps = 44/349 (12%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD------ALKVFDDIPDKNVVSWTAIISGY 106
H+L+ +G LLN C +D AL +FD +P + TA+ + +
Sbjct: 19 HALVTTSGRLLHPPSAAHLLNSLTSCISPSDPLHLRYALSLFDRMPCSTFLFDTALRACF 78
Query: 107 INEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG--------------------- 145
+ I ++RR+ + PD+F+ + C + G
Sbjct: 79 RASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPSA 138
Query: 146 -DLSTAKWIHGY--VNEAGKGRNVFVATSLVDL---------YAKCGNMEKARRVFDQMP 193
L + IH Y + G R F S+ D+ AK G ++ ARR+ + P
Sbjct: 139 VPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAP 198
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
+++V+W+ +I GY+ G EA+D F +M + + P+ T++G+LSAC L L G
Sbjct: 199 VRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCS 258
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM-KDKDQVVWNAVVSGLSMNG 312
+ L + L LIDMYAKCG +A +VF + + + WNA++ G G
Sbjct: 259 LHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVG 318
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
+V +A +F Q+E + TF L+ G H G + E F M R
Sbjct: 319 HVDIARSLFDQMEDHDVI----TFNSLITGYIHGGRLREALLLFTKMRR 363
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/561 (43%), Positives = 357/561 (63%), Gaps = 40/561 (7%)
Query: 80 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
+LA A +F + + + ++I + EA+ ++ +L GLKPD + V+
Sbjct: 115 FLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIK 174
Query: 140 ACTQLGDLSTAKW----IHGYVNEAGKGRNVFVATSLVDLYA------------------ 177
AC + S+ W +H +V ++G + ++ +SL+ LYA
Sbjct: 175 ACNE----SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSAR 230
Query: 178 -------------KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
K M AR VFD+M +D++SW++MI GYA G P EAL +F M+
Sbjct: 231 DVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMR 290
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
+KP T+V +LSACA LGAL+ G+ +++ N N ++GT L+DMYAKCG+++
Sbjct: 291 AVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKIS 350
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A +VF M+ KD + WN +++G++++G VK A +F ++++ G++PN TFV +L C+
Sbjct: 351 LATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACS 410
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
HAG+VDEG++ + MS + + P +EHYGC++DLL R+G L+EA ELI +MPMEPN
Sbjct: 411 HAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSAL 470
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
GALL GCR+H +L E V +LI L+P +SG Y+LLSNIY+A+ KW+DA K+R++M
Sbjct: 471 GALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVN 530
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAA-GFVPTTDHVLFD 523
GI K+ G S +E+ G+VH F+ GD SHP S KIY KL+E+ T+LK+A G+ T +VL D
Sbjct: 531 GISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLD 590
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
+EEE+K++ LA HSEKLA+A+GL+ K+ IRI KNLRVC DCH IKLISK+ GREII
Sbjct: 591 MEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREII 650
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
VRD NRFH F +G CSC DFW
Sbjct: 651 VRDRNRFHHFEDGECSCLDFW 671
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 174/345 (50%), Gaps = 33/345 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR S+ A+ Y++M G P + T+PFV+KAC G+ H+ +VK+G
Sbjct: 137 LIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSG 196
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINE----------- 109
+CD ++ +SL++LY + L A ++F+ ++VVSW A+I GY+
Sbjct: 197 FECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFD 256
Query: 110 --------------------GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
G EA+ +F ++ G+KP ++V +L+AC LG L
Sbjct: 257 RMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDK 316
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+H Y+N+ N V T+LVD+YAKCG + A +VF+ M KD+++W+++I G A
Sbjct: 317 GLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAI 376
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+G KEA +F M+ ++P T V +LSAC+ G ++ G M + + V
Sbjct: 377 HGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVE 436
Query: 270 GT-TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNG 312
+ID+ A+ G + +A ++ M + + A++ G ++G
Sbjct: 437 HYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHG 481
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/592 (41%), Positives = 359/592 (60%), Gaps = 23/592 (3%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L C + F+ G R H+ ++K F++T L+ LY C L DA VFD++P++N
Sbjct: 249 ILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERN 308
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGL---------------------KPDSFSI 134
VVSWTA+IS Y G +A+N+F + L +P+ F+
Sbjct: 309 VVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTF 368
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
VLT+CT + IH + + +VFV +SL+D+YAK G + +AR VF+ +PE
Sbjct: 369 ATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPE 428
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
+D+VS +++I GYA G +EAL++F +Q E +K Y T GVL+A + L AL+LG
Sbjct: 429 RDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQV 488
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
+ + R+E S VL +LIDMY+KCG + + ++F M ++ + WNA++ G S +G
Sbjct: 489 HNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEG 548
Query: 315 KVAFGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-VFSLTPMIEHY 372
+ +F + E+ ++P+ T + +L GC+H GL D+G FN MS + P +EHY
Sbjct: 549 REVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHY 608
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEP 432
GC+VDLLGRSG+++EA E IK MP EP A +WG+LL CR+H D+ E QL+ +EP
Sbjct: 609 GCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEP 668
Query: 433 WNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHP 492
N+GNYV+LSN+Y+++ +W D + +R +M K + K G S +E+D V+H F D SHP
Sbjct: 669 GNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHP 728
Query: 493 LSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPK 552
E+I K+ EL+T K G+VP VL D++EE+K+ L HSEKLAL+FGLI +
Sbjct: 729 RREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPAS 788
Query: 553 DVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IR+ KNLR+C DCH K ISK+ GRE+ +RD NRFH + G CSC+D+W
Sbjct: 789 VPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 177/317 (55%), Gaps = 7/317 (2%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P FTF VL +C F LG + HSLI+K + FV +SLL++Y G + +A V
Sbjct: 363 PNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTV 422
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F+ +P+++VVS TAIISGY G EEA+ +FRRL G+K + + VLTA + L L
Sbjct: 423 FECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAAL 482
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
K +H +V + V + SL+D+Y+KCGN+ +RR+FD M E+ ++SW++M+ GY
Sbjct: 483 DLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGY 542
Query: 208 ASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
+ +G +E L +F M+ E +KP+ T++ VLS C+ G + G+ + M +
Sbjct: 543 SKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVE 602
Query: 267 PVLGT--TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
P + ++D+ + GR+ +A + ++M + +W +++ ++ V + G F
Sbjct: 603 PKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDI--GEFAG 660
Query: 324 LEKCGIQP-NGNTFVGL 339
+ I+P N +V L
Sbjct: 661 QQLLEIEPGNAGNYVIL 677
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + A+E + ++ EG T+ VL A + LG + H+ ++++
Sbjct: 437 IISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSE 496
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ ++ SL+++Y CG L + ++FD + ++ V+SW A++ GY G E + +F
Sbjct: 497 IPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFT 556
Query: 121 RLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS-------- 171
+ +KPDS +I+ VL+ C+ HG + + KG N+F S
Sbjct: 557 LMREETKVKPDSVTILAVLSGCS-----------HGGLED--KGLNIFNDMSSGKIEVEP 603
Query: 172 -------LVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+VDL + G +E+A +MP E W S++
Sbjct: 604 KMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLL 644
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/640 (39%), Positives = 364/640 (56%), Gaps = 36/640 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G N A+ + M EG P + T + AC + G H +K
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM- 118
LD D V SL++ Y C + A + F I ++VSW A+++GY G+ EEAI +
Sbjct: 393 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELL 452
Query: 119 ----------------------------------FRRLLHRGLKPDSFSIVRVLTACTQL 144
F+R+ G+ P++ +I L AC Q+
Sbjct: 453 SEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQV 512
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
+L K IHGYV + V ++L+ +Y+ C ++E A VF ++ +D+V W+S+I
Sbjct: 513 RNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSII 572
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
A +G ALD+ M N++ TMV L AC+ L AL G F+ R
Sbjct: 573 SACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLD 632
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ + +LIDMY +CG + ++ ++F M +D V WN ++S M+G+ A +F Q
Sbjct: 633 TCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQF 692
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
G++PN TF LL C+H+GL++EG ++F M +++ P +E Y CMVDLL R+GQ
Sbjct: 693 RTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQ 752
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
+E E I+ MP EPNA VWG+LL CR+H DLAE+ L LEP +SGNYVL++NI
Sbjct: 753 FNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANI 812
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
YSA+ +W DAAKIR +M ++G+ K GCSW+EV +H F+VGD SHPL E+I +K++ L
Sbjct: 813 YSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESL 872
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
+K G+VP T+ VL D++E+EK++ L HSEK+ALAFGLI+T +RI KNLRVC
Sbjct: 873 YFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVC 932
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
GDCH A K ISK+ R+II+RDN RFH F++G CSC D+W
Sbjct: 933 GDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 201/413 (48%), Gaps = 47/413 (11%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +L+ C + ++ +LG + H+ +V G+D EF+ + LL +Y G + DA ++FD +
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
++NV SWTAI+ Y G+ EE I +F +++ G++PD F +V AC++L + K
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
++ Y+ G N V S++D++ KCG M+ ARR F+++ KD+ W+ M+ GY S G
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
K+AL +M+ +KP+ T ++S
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISG------------------------------- 300
Query: 273 LIDMYAKCGRMAQACKVFREM---KD--KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
YA+ G+ +A K F EM KD + V W A+++G NGY A VF ++
Sbjct: 301 ----YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++PN T + CT+ L+ GR+ +V L + +VD + ++
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL--IALEP----WN 434
A M + + + W A+LAG L + A +L+++ +EP WN
Sbjct: 417 ARRKF-GMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWN 468
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 178/355 (50%), Gaps = 41/355 (11%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
++ I+ + M NEG P +F FP V KAC+ ++++G + ++ G + + VK S
Sbjct: 171 YEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGS 230
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
+L++++ CG + A + F++I K+V W ++SGY ++G ++A+ + G+KPD
Sbjct: 231 ILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPD 290
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ W +++ YA+ G E+A + F
Sbjct: 291 QVT------------------W-----------------NAIISGYAQSGQFEEASKYFL 315
Query: 191 QMP-----EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+M + ++VSW+++I G NG+ EAL +F M E +KP T+ +SAC +L
Sbjct: 316 EMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNL 375
Query: 246 GALELGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
L G + ++ E S+ ++G +L+D YAKC + A + F +K D V WNA+
Sbjct: 376 SLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAM 435
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
++G ++ G + A + +++ GI+P+ T+ GL+ G T G +FF M
Sbjct: 436 LAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/664 (38%), Positives = 365/664 (54%), Gaps = 73/664 (10%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
H+ Y+ +R+ F P P LK+C + L H+ V +GL D FV +S
Sbjct: 1 MSHSNSLYHFLRHVSFPPDPHLLPSALKSCPAQ---PLARALHAAAVVSGLAEDPFVASS 57
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE----------------- 113
LL+ Y+ G A VFD +P+KNVV W+A+I+GY G+ E
Sbjct: 58 LLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPN 117
Query: 114 ------------------EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+A+ R+ G PD+ + L+A + ++S K +HG
Sbjct: 118 VITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHG 177
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI------------------ 197
YV +AG + V T+L+D+Y KCG ++ RVF + D+
Sbjct: 178 YVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSE 237
Query: 198 -----------------VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
VSW+S++ NG EA+D+F MQ ++P T+ VL
Sbjct: 238 ALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLP 297
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A++ AL G A F R FL + +G+ L+DMYAKCG+ A +F M ++ V
Sbjct: 298 AFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVS 357
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G +M+G A +F ++KC +P+ TF +L C+ AGL +EGR++FN M
Sbjct: 358 WNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQ 417
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ ++P +EHY CMV LLGRSG+LDEA++LI MP EP++ +WG+LL CR++ LA
Sbjct: 418 QGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLA 477
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L LEP N+GNYVLLSNIY++ W+ ++R M + G++K +GCSW+E+
Sbjct: 478 EVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNK 537
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH L GDNSHP+ I KL++L ++ GF P+ D VL D+EE+EK LA HSEKL
Sbjct: 538 VHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKL 597
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A GLI+T P +R+ KNLR+CGDCHEA+K IS REI VRD NRFH F +G CSC
Sbjct: 598 AVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSC 657
Query: 601 KDFW 604
D+W
Sbjct: 658 GDYW 661
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/573 (41%), Positives = 357/573 (62%), Gaps = 2/573 (0%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG-LDCDEFVKTSLLNLYVHCGYLADA 84
+P + +LK C R + G H+ +V + LD ++ ++N+Y CG L DA
Sbjct: 83 LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDA 142
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
++FD++P K++V+WTA+I+G+ +A+ +F ++L G +P+ F++ +L A
Sbjct: 143 RRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSE 202
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
L +H + + G +V+V ++LVD+YA+CG+M+ A+ FD MP K VSW+++I
Sbjct: 203 HGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALI 262
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G+A G + AL + + MQR+N +P ++T VLSACAS+GALE G W + M ++
Sbjct: 263 SGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLK 322
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+G TL+DMYAK G + A +VF + D V WN +++G + +G K F Q+
Sbjct: 323 LIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQM 382
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ GI+PN +F+ +L C+H+GL+DEG +F M + + + P + HY VDLLGR G
Sbjct: 383 LRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGL 441
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
LD A I+ MP+EP A VWGALL CR+HK +L + + L+P +SG +LLSNI
Sbjct: 442 LDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNI 501
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+++ +W D AK+R MM + G++K CSWVE++ VH F+ D +HP ++I K +E+
Sbjct: 502 YASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEI 561
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
+ K+K G+VP T HVL ++++E++ L HSEKLALAF L+ T IRI KN+RVC
Sbjct: 562 SGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVC 621
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
GDCH AIK +SK+ REIIVRD NRFH F +GS
Sbjct: 622 GDCHAAIKFVSKVVDREIIVRDTNRFHRFRDGS 654
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 183/333 (54%), Gaps = 3/333 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF N+ + A+ + M GF P +FT +LKA EH G + H+ +K G
Sbjct: 160 LIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYG 219
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+V ++L+++Y CG++ A FD +P K+ VSW A+ISG+ +G E A+++
Sbjct: 220 YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLW 279
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + +P F+ VL+AC +G L KW+H ++ ++G F+ +L+D+YAK G
Sbjct: 280 KMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAG 339
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A+RVFD++ + D+VSW++M+ G A +G KE LD F M R ++P + + VL+
Sbjct: 340 SIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLT 399
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQV 299
AC+ G L+ G++ M++ + + T +D+ + G + +A + REM +
Sbjct: 400 ACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAA 459
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
VW A++ M + + GV+ + P+
Sbjct: 460 VWGALLGACRM--HKNMELGVYAAERAFELDPH 490
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 177/318 (55%), Gaps = 12/318 (3%)
Query: 122 LLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS-LVDLYAKC 179
L+ RG L PD ++L CT+LG + + +H ++ ++ N V + +V++YAKC
Sbjct: 77 LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ ARR+FD+MP KD+V+W+++I G++ N P++AL +F M R +P ++T+ +L
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLL 196
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A S L+ G +F + + S+ +G+ L+DMYA+CG M A F M K +V
Sbjct: 197 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG + G + A + ++++ QP T+ +L C G +++G+ M
Sbjct: 257 SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHM 316
Query: 360 SRVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH---K 415
+ S +I G ++D+ ++G +D+A + + ++P+ + W +L GC H K
Sbjct: 317 --IKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHGLGK 373
Query: 416 KT-DLAEHVLNQLIALEP 432
+T D E +L I +EP
Sbjct: 374 ETLDRFEQMLR--IGIEP 389
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 119/254 (46%), Gaps = 18/254 (7%)
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP-VLGTTLI 274
ALD+ +QR +L P+Y +L C LG +E G + + + FL N VL ++
Sbjct: 74 ALDL---IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+MYAKCG + A ++F EM KD V W A+++G S N + A +F Q+ + G QPN
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHF 190
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
T LL +D G Q ++ + + +VD+ R G +D A
Sbjct: 191 TLSSLLKASGSEHGLDPGTQ-LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWN-SGNYVLLSNIYSA------ 447
MP + + + W AL++G H + EH L+ L ++ N + S++ SA
Sbjct: 250 MPTK-SEVSWNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGA 305
Query: 448 --SHKWNDAAKIRS 459
KW A I+S
Sbjct: 306 LEQGKWVHAHMIKS 319
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/621 (39%), Positives = 358/621 (57%), Gaps = 18/621 (2%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNE----GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIV 57
IR S F HAI + MR + P LK+CA LG H+L +
Sbjct: 26 IRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLHALAL 85
Query: 58 KAGLDCDEFVKTSLLNLYVHCG--------------YLADALKVFDDIPDKNVVSWTAII 103
++G D F +LLNLY L KVFD++P+K+VVSW ++
Sbjct: 86 RSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLV 145
Query: 104 SGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG 163
G G EA+ + R + G KPDSF++ VL + D+ +HG+ G
Sbjct: 146 LGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFH 205
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
+VFV +SL+D+YA C + + +VFD +P +D + W+SM+ G A NG EAL +F M
Sbjct: 206 DDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRM 265
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
+KP T ++ AC +L +L LG +++ R F N + ++LIDMY KCG +
Sbjct: 266 LHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNV 325
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
+ A ++F ++ D V W A++ G +++G + A +F ++E ++PN TF+ +L C
Sbjct: 326 SIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTAC 385
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
+HAGLVD+G ++FNSMS + + P +EH+ + D LGR G+L+EA+ I M ++P A V
Sbjct: 386 SHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASV 445
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGD 463
W LL C++HK T LAE V ++ LEP + G++++LSN YS+S +WN+AA +R M
Sbjct: 446 WSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRK 505
Query: 464 KGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
KG+QK CSW+EV H F+ D SHP E+I L+ + ++ G+VP TD V D
Sbjct: 506 KGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQD 565
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
IEEE+K L HSEKLA+ FG+I+T P IR+ KNLRVC DCH K ISKI GREI+
Sbjct: 566 IEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKIVGREIV 625
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
+RD NRFH F +G CSC DFW
Sbjct: 626 MRDANRFHHFKDGICSCGDFW 646
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/674 (37%), Positives = 370/674 (54%), Gaps = 70/674 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F +I ++ M + G +P + P + K CA F++G + H + +G
Sbjct: 87 LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG 146
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-------------------------- 94
LD D FV+ S+ ++Y+ CG + DA KVFD + DK
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 95 ---------NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
N+VSW I+SG+ G +EA+ MF+++ H G PD ++ VL +
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSE 266
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM----------------------- 182
L+ + IHGYV + G ++ V ++++D+Y K G++
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326
Query: 183 --------EKARRVFD----QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+KA +F+ Q E ++VSW+S+I G A NG EAL++F MQ +KP
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ T+ +L AC ++ AL G F R L N +G+ LIDMYAKCGR+ + VF
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M K+ V WN++++G SM+G K +F L + ++P+ +F LL C GL D
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
EG ++F MS + + P +EHY CMV+LLGR+G+L EA++LIK MP EP++ VWGALL
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CRL DLAE +L LEP N G YVLLSNIY+A W + IR+ M G++K
Sbjct: 567 CRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP 626
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
GCSW++V V+ L GD SHP ++I K+DE++ +++ +G P D L D+EE+E++
Sbjct: 627 GCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQE 686
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L HSEKLA+ FGL+ T +++ KNLR+CGDCH IK IS GREI +RD NRF
Sbjct: 687 QMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRF 746
Query: 591 HCFIEGSCSCKDFW 604
H F +G CSC DFW
Sbjct: 747 HHFKDGICSCGDFW 760
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 185/450 (41%), Gaps = 74/450 (16%)
Query: 50 VRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINE 109
++H+ I+K+G D ++ L+ Y + DA V IPD + S++++I
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
++I +F R+ GL PDS + + C +L K IH +G + FV
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKD--------------------------------- 196
S+ +Y +CG M AR+VFD+M +KD
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 197 --IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
IVSW+ ++ G+ +G+ KEA+ MF + P+ T+ VL + L +G
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
++ + L + + + +IDMY K G + +F + + + V NA ++GLS NG V
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 315 KV-----------------------------------AFGVFGQLEKCGIQPNGNTFVGL 339
A +F +++ G++PN T +
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 340 LCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPME 398
L C + + GR RV L + H G ++D+ + G+++ + + MP +
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
N + W +L+ G +H K + L+
Sbjct: 453 -NLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/605 (40%), Positives = 367/605 (60%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ +V N + AIEF + M GF P + + A G H+ +K
Sbjct: 337 MLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQR 396
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D V +L+++Y+ C Y+ + VFD + K+ +SWT II+ Y EA+ +FR
Sbjct: 397 LDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFR 456
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
G+K D I +L AC+ L + AK +H Y G ++ V ++D+Y +CG
Sbjct: 457 EAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECG 515
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + ++F+ + +KDIV+W+SMI YA++G EAL +F MQ +++P+ +V +L
Sbjct: 516 EVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILG 575
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A L +L G F+ R F + ++L+DMY+ CG ++ A KVF +K KD V+
Sbjct: 576 AIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVL 635
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A+++ M+G+ K A +F ++ + G+ P+ +F+ LL C+H+ LV+EG+ + + M
Sbjct: 636 WTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMM 695
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L P EHY C+VDLLGRSGQ +EA+E IKSMP++P ++VW +LL CR+HK +LA
Sbjct: 696 STYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELA 755
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
N+L+ LEP N GNYVL+SN+++ KWN+A ++R+ + ++G++K CSW+E+
Sbjct: 756 VVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNN 815
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKL-KAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F DNSH +E+I KL E+ +L K G+ T VL D+ EEEK L HSE+
Sbjct: 816 VHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSER 875
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA++FGLI T P +RIAKNLRVCGDCHE KL+SK+ R+I+VRD NRFH F GSCS
Sbjct: 876 LAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCS 935
Query: 600 CKDFW 604
C DFW
Sbjct: 936 CGDFW 940
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 182/350 (52%), Gaps = 8/350 (2%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG-LDCDE-FVK 68
+ A+ S + G P + +VL A + GV+ H+ V G L+ D+ F+
Sbjct: 40 LRQALRLLTS-QTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLA 98
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL---LHR 125
T LL +Y CG +ADA +FD + + V SW A+I Y++ G+ EA+ ++R +
Sbjct: 99 TKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAAS 158
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G+ PD ++ VL A GD +HG + G R+ FVA +L+ +YAKCG ++ A
Sbjct: 159 GVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSA 218
Query: 186 RRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
RVF+ M + +D+ SW+SMI G NG +ALD+F MQR L YT VGVL C
Sbjct: 219 MRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTE 278
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
L L LG + + ++ N + L+ MY KCGR+ A +VFRE+ +KD + WN++
Sbjct: 279 LAQLNLGRELHAALLKSGSEVN-IQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSM 337
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+S NG A ++ + G QP+ V L H G + G++
Sbjct: 338 LSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKE 387
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 238/499 (47%), Gaps = 44/499 (8%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + N F A++ + M+ ++T VL+ C LG H+ ++K+G
Sbjct: 237 MISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSG 296
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + +LL +Y CG + AL+VF +I +K+ +SW +++S Y+ G EAI
Sbjct: 297 SEVN-IQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFIS 355
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G +PD IV + +A LG L K +H Y + + V +L+D+Y KC
Sbjct: 356 EMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCR 415
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E + VFD+M KD +SW+++I YA + EAL++F Q+E +K + + +L
Sbjct: 416 YIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILE 475
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+ L + L + RN L + V+ +ID+Y +CG + + K+F ++ KD V
Sbjct: 476 ACSGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVT 534
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++++ + +G + A +F +++ +QP+ V +L + +G++ +
Sbjct: 535 WTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLI 594
Query: 361 R---------VFSLTPMIEHYGC-----------------------MVDLLGRSGQLDEA 388
R V SL M + GC M++ G G +A
Sbjct: 595 RRNFHMEEAIVSSLVDM--YSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQA 652
Query: 389 HELIKSM---PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA---LEPWNSGNYVLLS 442
+L K M + P+ + + ALL C K + + L+ +++ LEPW +Y +
Sbjct: 653 IDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQE-HYACVV 711
Query: 443 NIYSASHKWNDAAK-IRSM 460
++ S + +A + I+SM
Sbjct: 712 DLLGRSGQTEEAYEFIKSM 730
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE--- 325
L T L+ MY KCGR+A A +F M + WNA++ +G A GV+ +
Sbjct: 97 LATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSA 156
Query: 326 KCGIQPNGNTFVGLL----------CGCTHAGLVDEGRQFFNSMSR-VFSLTPMIEHYGC 374
G+ P+G T +L CGC GL + + + R F +I Y
Sbjct: 157 ASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVK-----HGLDRSTFVANALIAMYA- 210
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ G LD A + + M + W ++++GC
Sbjct: 211 ------KCGILDSAMRVFELMHDGRDVASWNSMISGC 241
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/574 (40%), Positives = 363/574 (63%), Gaps = 2/574 (0%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +L AC + + G R H+ ++K +++T LL Y C L DA KV D++P
Sbjct: 54 YDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 113
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
+KNVVSWTA+IS Y G+ EA+++F ++ KP+ F+ VLT+C + L+ K
Sbjct: 114 EKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQ 173
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IHG + + ++FV +SL+D+YAK G +E+AR +F+ +PE+D+VS +++I GYA G
Sbjct: 174 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGL 233
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+EAL+MF +Q E ++P Y T +L+A + L L+ G A + R E VL +
Sbjct: 234 DEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 293
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQP 331
LIDMY+KCG ++ A ++F M ++ + WNA++ G S +G + +F + ++ ++P
Sbjct: 294 LIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 353
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
+ T + +L GC+H + D G ++ M + + + P EHYGC+VD+LGR+G++DEA E
Sbjct: 354 DAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFE 413
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
IK MP +P A V G+LL CR+H D+ E+V ++LI +EP N+GNYV+LSN+Y+++ +
Sbjct: 414 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGR 473
Query: 451 WNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKA 510
W D +R+MM K + K G SW++ + +H F D +HP E++ +K+ E++ K+K
Sbjct: 474 WEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 533
Query: 511 AGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEA 570
AG+VP VL+D++EE+K+ L HSEKLAL FGLITT IR+ KNLR+C DCH
Sbjct: 534 AGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNF 593
Query: 571 IKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K+ SK+ RE+ +RD NRFH ++G CSC D+W
Sbjct: 594 AKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 160/283 (56%), Gaps = 4/283 (1%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
F MR++G P FTF VL +C R LG + H LIVK D FV +SLL++Y
Sbjct: 140 FAEMMRSDG-KPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYA 198
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVR 136
G + +A ++F+ +P+++VVS TAII+GY G EEA+ MF+RL G++P+ +
Sbjct: 199 KAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYAS 258
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
+LTA + L L K H +V + SL+D+Y+KCGN+ A+R+FD MPE+
Sbjct: 259 LLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERT 318
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALELGVWAS 255
+SW++M+ GY+ +G +E L++F M+ E +KP+ T++ VLS C+ + G+
Sbjct: 319 AISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIY 378
Query: 256 SFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK 296
M E+ P ++DM + GR+ +A + + M K
Sbjct: 379 DGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 421
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 102/198 (51%), Gaps = 3/198 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + A+E + +++EG P T+ +L A + G ++H +++
Sbjct: 224 IIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 283
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L ++ SL+++Y CG L+ A ++FD++P++ +SW A++ GY G E + +FR
Sbjct: 284 LPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 343
Query: 121 RLL-HRGLKPDSFSIVRVLTACT--QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+ + +KPD+ +++ VL+ C+ ++ D + + E G + +VD+
Sbjct: 344 LMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLG 403
Query: 178 KCGNMEKARRVFDQMPEK 195
+ G +++A +MP K
Sbjct: 404 RAGRIDEAFEFIKRMPSK 421
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/511 (44%), Positives = 336/511 (65%), Gaps = 2/511 (0%)
Query: 1 MIRGF-VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRG SN+ + Y M ++G +P N+T PFVLKACA + G H +K
Sbjct: 95 IIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKM 154
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL D +V +L+ +Y C + A KVFD P +++VSWT +I GY+ G E + +F
Sbjct: 155 GLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLF 214
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV-NEAGKGRNVFVATSLVDLYAK 178
+ L+ D ++V VL++C +LGDL + +H Y+ + +VFV +LVD+Y K
Sbjct: 215 FEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLK 274
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG+ AR+VF +MP K++VSW+SMI G A G KE+L MF MQR +KP+ T+V V
Sbjct: 275 CGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAV 334
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L++CA+LG LELG W ++++RN+ ++ +G L+DMYAKCG + QAC VF+ M KD
Sbjct: 335 LNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDV 394
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ A++ GL+M+G A +F ++ K GI+P+ TFVG+L C+H GLV+EGR++F
Sbjct: 395 YSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFED 454
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
MS +++L P +EHYGCMVDLLGR+G ++EA E I++MP+EP+A V GALL C++H K +
Sbjct: 455 MSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVE 514
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E V+ ++ +EP G YVL+SNIYS++++W DA K+R M ++ ++K GCS +E+D
Sbjct: 515 LGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELD 574
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
GV+HEF GD SHP ++IY LDE+ + LK
Sbjct: 575 GVIHEFQKGDKSHPKIKEIYKLLDEIMSHLK 605
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/620 (40%), Positives = 358/620 (57%), Gaps = 51/620 (8%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L AC H ++ G D FV +L++ Y CG + +A+KVF+ + K+
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330
Query: 96 VVSWTAIISGYINEGNLE-----------------------------------EAINMFR 120
VVSW A+++GY GN E EA+N+FR
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV----------NEAGKGRNVFVAT 170
+++ G P+ +I+ VL+AC LG S IH Y + G+ ++ V
Sbjct: 391 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 450
Query: 171 SLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-- 226
+L+D+Y+KC + + AR +FD +P E+++V+W+ MI G+A G +AL +F M E
Sbjct: 451 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 510
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV--LGTTLIDMYAKCGRMA 284
+ P YT+ +L ACA L A+ +G +++ R+ + + LIDMY+KCG +
Sbjct: 511 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 570
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A VF M K + W ++++G M+G A +F ++ K G P+ TF+ +L C+
Sbjct: 571 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 630
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
H G+VD+G +F+SMS + LTP EHY C +DLL RSG+LD+A +K MPMEP A+VW
Sbjct: 631 HCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVW 690
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
ALL+ CR+H +LAEH LN+L+ + N G+Y L+SNIY+ + +W D A+IR +M
Sbjct: 691 VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKS 750
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
GI+K GCSWV+ F VGD SHPLS +IY+ L+ L ++KA G+VP T+ L D+
Sbjct: 751 GIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDV 810
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
+EEEK L HSEKLALA+GL+TT+P IRI KNLRVCGDCH A ISKI EI+V
Sbjct: 811 DEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVV 870
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD +RFH F GSCSC +W
Sbjct: 871 RDPSRFHHFKNGSCSCGGYW 890
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 229/486 (47%), Gaps = 60/486 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + AI M G P +FT P VLKAC ++ G H LI G
Sbjct: 126 LIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNG 185
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK---NVVSWTAIISGYINEGNLEEAIN 117
+ + F+ +L+ +Y CG L +A +FD+I + +V+SW +I+S ++ N A++
Sbjct: 186 FESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALD 245
Query: 118 MFRRL---LHR---GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+F ++ +H + D SIV +L AC L + K +HG G +VFV +
Sbjct: 246 LFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNA 305
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK-- 229
L+D YAKCG ME A +VF+ M KD+VSW++M+ GY+ +G + A ++F NM++EN+
Sbjct: 306 LIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLD 365
Query: 230 ---------------------------------PEYYTMVGVLSACASLGALELGVWASS 256
P T++ VLSACASLGA G +
Sbjct: 366 VVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHA 425
Query: 257 FMERNEFLS----------NPVLGTTLIDMYAKCGRMAQACKVFRE--MKDKDQVVWNAV 304
+ +N L+ + ++ LIDMY+KC A +F + +++++ V W +
Sbjct: 426 YSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVM 485
Query: 305 VSGLSMNGYVKVAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
+ G + G A +F ++ E G+ PN T +L C H + G+Q + R
Sbjct: 486 IGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH 545
Query: 363 FSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
C++D+ + G +D A + SM + +AI W +++ G +H + A
Sbjct: 546 HRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHGRGSEAL 604
Query: 422 HVLNQL 427
+ +++
Sbjct: 605 DIFDKM 610
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 180/352 (51%), Gaps = 18/352 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK-- 58
+I G+ C A+ + M G LP T VL ACA F G H+ +K
Sbjct: 372 VIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNC 431
Query: 59 --------AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYIN 108
G D D V +L+++Y C A +FDDIP ++NVV+WT +I G+
Sbjct: 432 LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQ 491
Query: 109 EGNLEEAINMFRRLLHR--GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV--NEAGKGR 164
G+ +A+ +F ++ G+ P++++I +L AC L + K IH YV + +
Sbjct: 492 YGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESS 551
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
FVA L+D+Y+KCG+++ AR VFD M +K +SW+SM+ GY +G EALD+F M+
Sbjct: 552 AYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMR 611
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRM 283
+ P+ T + VL AC+ G ++ G+ M + L+ ID+ A+ GR+
Sbjct: 612 KAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRL 671
Query: 284 AQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+A + ++M + VVW A++S ++ V++A +L + + +G+
Sbjct: 672 DKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGS 723
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 155/300 (51%), Gaps = 9/300 (3%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T ++ Y+ CG AL V + + V W +I +I +G L+ AIN+ R+L G +
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
PD F++ VL AC +L HG + G NVF+ +LV +Y++CG++E+A +
Sbjct: 153 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 212
Query: 189 FDQMPEK---DIVSWSSMIQGYASNGFPKEALDMFYNM------QRENLKPEYYTMVGVL 239
FD++ ++ D++SW+S++ + + ALD+F M + N + + ++V +L
Sbjct: 213 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 272
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC SL A+ RN + +G LID YAKCG M A KVF M+ KD V
Sbjct: 273 PACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 332
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA+V+G S +G + AF +F + K I + T+ ++ G + G E F M
Sbjct: 333 SWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQM 392
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE--GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G A++ + M +E G P +T +L ACA ++G + H+ +++
Sbjct: 485 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 544
Query: 59 AGL--DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
FV L+++Y CG + A VFD + K+ +SWT++++GY G EA+
Sbjct: 545 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 604
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDL 175
++F ++ G PD + + VL AC+ G + + + G +DL
Sbjct: 605 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 664
Query: 176 YAKCGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPE 231
A+ G ++KA R MP E V W +++ +++ + AL+ M EN
Sbjct: 665 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN--DG 722
Query: 232 YYTMVGVLSACA 243
YT++ + A A
Sbjct: 723 SYTLISNIYATA 734
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 127/310 (40%), Gaps = 56/310 (18%)
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
+ T +V Y CG + A V +++ V W+ +I+ + G A+++ M R
Sbjct: 91 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+P+++T+ VL AC L + G + N F SN + L+ MY++CG + +A
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210
Query: 288 KVFREMKDK---DQVVWNAVVSGLSMNGYVKVAFGVFGQ--------------------- 323
+F E+ + D + WN++VS + A +F +
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270
Query: 324 -LEKCGI--------QPNGNT---------FVG--LLCGCTHAGLVDEGRQFFNSM--SR 361
L CG + +GN FVG L+ GL++ + FN M
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP---NAIVWGALLAGCRLHKKTD 418
V S M+ Y +SG + A EL K+M E + + W A++AG +
Sbjct: 331 VVSWNAMVAGY-------SQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 383
Query: 419 LAEHVLNQLI 428
A ++ Q+I
Sbjct: 384 EALNLFRQMI 393
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/572 (42%), Positives = 358/572 (62%), Gaps = 1/572 (0%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +L++C + G + H+ I + G+ + + T L+NLY C L +A +FD I
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
+N+ W +I GY G E AI+++ ++ GL PD F+ VL AC+ L + K
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IH V +G +VFV +L+D+YAKCG +E AR+VFD++ E+D+V W+SM+ Y+ NG
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
P E+L + M LKP T V ++A A G L G + R+ F SN + T
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+DMYAK G + A +F +++K V WNA+++G +M+G+ A +F ++ K + P+
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPD 302
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
TFVG+L C+H GL++EG+ F SM F++ P ++HY CM+DLLG G+L+EA++LI
Sbjct: 303 HITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLI 362
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
M +EP+A VWGALL C++H ++ E L +L+ LEP + GNYV+LSN+Y+ + KW+
Sbjct: 363 MEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWD 422
Query: 453 DAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAG 512
A++R +M +KG++K CSW+EV VH FL D SHP SE IY++L +K AG
Sbjct: 423 GVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAG 482
Query: 513 FVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIK 572
+ P V D+E++EK ++CHSE+LA+AFGLI+T+ + I KNLR+C DCH AIK
Sbjct: 483 YAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIK 542
Query: 573 LISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
ISKIT REI +RD NR+H F +G CSC DFW
Sbjct: 543 FISKITEREITIRDVNRYHHFKDGVCSCGDFW 574
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 193/340 (56%), Gaps = 5/340 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+ N ++ AI Y MR+ G +P FTFPFVLKAC+ + G + H ++++G
Sbjct: 73 MIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSG 132
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV +L+++Y CG + A +VFD I +++VV W ++++ Y G +E++ + R
Sbjct: 133 LESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCR 192
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GLKP + V + A G L K +HGY G N V T+L+D+YAK G
Sbjct: 193 VMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSG 252
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR +F+ + EK +VSW++MI GYA +G EALD+F M+ + L P++ T VGVL+
Sbjct: 253 SVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVL-PDHITFVGVLA 311
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G L G M ++F P + T +ID+ CGR+ +A K+ EM+ + D
Sbjct: 312 ACSHGGLLNEGKMHFRSM-ISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPD 370
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
VW A++ ++G V++ +L + GN +
Sbjct: 371 AGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVI 410
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/620 (40%), Positives = 358/620 (57%), Gaps = 51/620 (8%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L AC H ++ G D FV +L++ Y CG + +A+KVF+ + K+
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337
Query: 96 VVSWTAIISGYINEGNLE-----------------------------------EAINMFR 120
VVSW A+++GY GN E EA+N+FR
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV----------NEAGKGRNVFVAT 170
+++ G P+ +I+ VL+AC LG S IH Y + G+ ++ V
Sbjct: 398 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 457
Query: 171 SLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-- 226
+L+D+Y+KC + + AR +FD +P E+++V+W+ MI G+A G +AL +F M E
Sbjct: 458 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 517
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV--LGTTLIDMYAKCGRMA 284
+ P YT+ +L ACA L A+ +G +++ R+ + + LIDMY+KCG +
Sbjct: 518 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 577
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A VF M K + W ++++G M+G A +F ++ K G P+ TF+ +L C+
Sbjct: 578 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 637
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
H G+VD+G +F+SMS + LTP EHY C +DLL RSG+LD+A +K MPMEP A+VW
Sbjct: 638 HCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVW 697
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
ALL+ CR+H +LAEH LN+L+ + N G+Y L+SNIY+ + +W D A+IR +M
Sbjct: 698 VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKS 757
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
GI+K GCSWV+ F VGD SHPLS +IY+ L+ L ++KA G+VP T+ L D+
Sbjct: 758 GIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDV 817
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
+EEEK L HSEKLALA+GL+TT+P IRI KNLRVCGDCH A ISKI EI+V
Sbjct: 818 DEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVV 877
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD +RFH F GSCSC +W
Sbjct: 878 RDPSRFHHFKNGSCSCGGYW 897
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 229/486 (47%), Gaps = 60/486 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + AI M G P +FT P VLKAC ++ G H LI G
Sbjct: 133 LIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNG 192
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK---NVVSWTAIISGYINEGNLEEAIN 117
+ + F+ +L+ +Y CG L +A +FD+I + +V+SW +I+S ++ N A++
Sbjct: 193 FESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALD 252
Query: 118 MFRRL---LHR---GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+F ++ +H + D SIV +L AC L + K +HG G +VFV +
Sbjct: 253 LFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNA 312
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK-- 229
L+D YAKCG ME A +VF+ M KD+VSW++M+ GY+ +G + A ++F NM++EN+
Sbjct: 313 LIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLD 372
Query: 230 ---------------------------------PEYYTMVGVLSACASLGALELGVWASS 256
P T++ VLSACASLGA G +
Sbjct: 373 VVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHA 432
Query: 257 FMERNEFLS----------NPVLGTTLIDMYAKCGRMAQACKVFRE--MKDKDQVVWNAV 304
+ +N L+ + ++ LIDMY+KC A +F + +++++ V W +
Sbjct: 433 YSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVM 492
Query: 305 VSGLSMNGYVKVAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
+ G + G A +F ++ E G+ PN T +L C H + G+Q + R
Sbjct: 493 IGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH 552
Query: 363 FSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
C++D+ + G +D A + SM + +AI W +++ G +H + A
Sbjct: 553 HRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHGRGSEAL 611
Query: 422 HVLNQL 427
+ +++
Sbjct: 612 DIFDKM 617
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 180/352 (51%), Gaps = 18/352 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK-- 58
+I G+ C A+ + M G LP T VL ACA F G H+ +K
Sbjct: 379 VIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNC 438
Query: 59 --------AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYIN 108
G D D V +L+++Y C A +FDDIP ++NVV+WT +I G+
Sbjct: 439 LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQ 498
Query: 109 EGNLEEAINMFRRLLHR--GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV--NEAGKGR 164
G+ +A+ +F ++ G+ P++++I +L AC L + K IH YV + +
Sbjct: 499 YGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESS 558
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
FVA L+D+Y+KCG+++ AR VFD M +K +SW+SM+ GY +G EALD+F M+
Sbjct: 559 AYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMR 618
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRM 283
+ P+ T + VL AC+ G ++ G+ M + L+ ID+ A+ GR+
Sbjct: 619 KAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRL 678
Query: 284 AQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+A + ++M + VVW A++S ++ V++A +L + + +G+
Sbjct: 679 DKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGS 730
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 155/300 (51%), Gaps = 9/300 (3%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T ++ Y+ CG AL V + + V W +I +I +G L+ AIN+ R+L G +
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
PD F++ VL AC +L HG + G NVF+ +LV +Y++CG++E+A +
Sbjct: 160 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 219
Query: 189 FDQMPEK---DIVSWSSMIQGYASNGFPKEALDMFYNM------QRENLKPEYYTMVGVL 239
FD++ ++ D++SW+S++ + + ALD+F M + N + + ++V +L
Sbjct: 220 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 279
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC SL A+ RN + +G LID YAKCG M A KVF M+ KD V
Sbjct: 280 PACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 339
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA+V+G S +G + AF +F + K I + T+ ++ G + G E F M
Sbjct: 340 SWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQM 399
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE--GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G A++ + M +E G P +T +L ACA ++G + H+ +++
Sbjct: 492 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 551
Query: 59 AGL--DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
FV L+++Y CG + A VFD + K+ +SWT++++GY G EA+
Sbjct: 552 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 611
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDL 175
++F ++ G PD + + VL AC+ G + + + G +DL
Sbjct: 612 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 671
Query: 176 YAKCGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPE 231
A+ G ++KA R MP E V W +++ +++ + AL+ M EN
Sbjct: 672 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN--DG 729
Query: 232 YYTMVGVLSACA 243
YT++ + A A
Sbjct: 730 SYTLISNIYATA 741
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 127/310 (40%), Gaps = 56/310 (18%)
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
+ T +V Y CG + A V +++ V W+ +I+ + G A+++ M R
Sbjct: 98 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+P+++T+ VL AC L + G + N F SN + L+ MY++CG + +A
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217
Query: 288 KVFREMKDK---DQVVWNAVVSGLSMNGYVKVAFGVFGQ--------------------- 323
+F E+ + D + WN++VS + A +F +
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277
Query: 324 -LEKCGI--------QPNGN---------TFVG--LLCGCTHAGLVDEGRQFFNSM--SR 361
L CG + +GN FVG L+ GL++ + FN M
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP---NAIVWGALLAGCRLHKKTD 418
V S M+ Y +SG + A EL K+M E + + W A++AG +
Sbjct: 338 VVSWNAMVAGY-------SQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 390
Query: 419 LAEHVLNQLI 428
A ++ Q+I
Sbjct: 391 EALNLFRQMI 400
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/609 (39%), Positives = 356/609 (58%), Gaps = 32/609 (5%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P+ + ++++C + Q G + H I +G F+ LL +Y C L D+ K+
Sbjct: 68 PSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKL 127
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR---------------------- 125
FD++P++++ SW +ISGY G L+EA ++F ++ R
Sbjct: 128 FDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEAL 187
Query: 126 ----------GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
K + F++ L A + L K IHGY+ G + V ++L D+
Sbjct: 188 ELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDM 247
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y KCG++E+AR +FD+M ++DIV+W++MI Y +G KE D+F ++ R ++P +T
Sbjct: 248 YGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTF 307
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
GVL+ACA+ + ELG +M R F + L+ MY+KCG M A +VF+E
Sbjct: 308 SGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQ 367
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
D W ++++G + NG A F L K G QP+ TFVG+L C HAGLVD+G +
Sbjct: 368 PDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDY 427
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F+S+ + LT +HY C++DLL RSGQ DEA +I M M+P+ +W +LL GCR+H
Sbjct: 428 FHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHG 487
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
LA+ L +EP N YV L+NIY+ + W++ AKIR M D+G+ K G SW+
Sbjct: 488 NLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWI 547
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
+ VH FLVGD+SHP S++I L +L+ ++K GFVP T+ VL D+E+E+K+ L+
Sbjct: 548 AIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSY 607
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+AFG+I+T I++ KNLR C DCH AIK ISKIT R+IIVRD+NRFH F +
Sbjct: 608 HSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFED 667
Query: 596 GSCSCKDFW 604
G CSC+D+W
Sbjct: 668 GHCSCRDYW 676
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 196/363 (53%), Gaps = 6/363 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+V +D A+E + M R++ FT L A A ++G H I++
Sbjct: 173 MISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRT 232
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD DE V ++L ++Y CG + +A +FD + D+++V+WTA+I Y +G +E ++F
Sbjct: 233 GLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLF 292
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
LL G++P+ F+ VL AC K +HGY+ G F A++LV +Y+KC
Sbjct: 293 ADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKC 352
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GNM A RVF + P+ D+ SW+S+I GYA NG P EA+ F + + +P++ T VGVL
Sbjct: 353 GNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVL 412
Query: 240 SACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-D 297
SACA G ++ G+ + S E+ +ID+ A+ G+ +A + +M K D
Sbjct: 413 SACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPD 472
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFF 356
+ +W +++ G ++G +K+A L + I+P N T+V L AG+ E +
Sbjct: 473 KFLWASLLGGCRIHGNLKLAQRAAEALFE--IEPENPATYVTLANIYATAGMWSEVAKIR 530
Query: 357 NSM 359
+M
Sbjct: 531 KTM 533
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 175/370 (47%), Gaps = 43/370 (11%)
Query: 100 TAIISGYINEGNLEEAINMF---------RRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
T ++ N +EAI++ ++LH+ KP + ++ +C + L
Sbjct: 30 TTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQG 89
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
K +H ++ +G +F+ L+++YAKC ++ ++++FD+MPE+D+ SW+ +I GYA
Sbjct: 90 KKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKM 149
Query: 211 GF-------------------------------PKEALDMFYNMQR-ENLKPEYYTMVGV 238
G P EAL++F M+R +N K +T+
Sbjct: 150 GLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSA 209
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L+A A++ L +G ++ R S+ V+ + L DMY KCG + +A +F +M D+D
Sbjct: 210 LAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDI 269
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W A++ +G K F +F L + GI+PN TF G+L C + + G++
Sbjct: 270 VTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGY 329
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M+RV P +V + + G + A + K P +P+ W +L+AG + + D
Sbjct: 330 MTRV-GFDPFSFAASALVHMYSKCGNMVSAERVFKETP-QPDLFSWTSLIAGYAQNGQPD 387
Query: 419 LAEHVLNQLI 428
A L+
Sbjct: 388 EAIRYFELLV 397
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/606 (40%), Positives = 369/606 (60%), Gaps = 6/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V N E +N M+ G PT+ TF V+K+CA + L +K+G
Sbjct: 266 MIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSG 325
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-KNVVSWTAIISGYINEGNLEEAINMF 119
D+ V T+L+ C + DAL +F + + KNVVSWTA+ISG + G ++A+N+F
Sbjct: 326 FTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLF 385
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G+KP+ F+ +LT + +H V + R+ V T+L+D Y K
Sbjct: 386 SQMRREGVKPNHFTYSAILTVHYPV----FVSEMHAEVIKTNYERSSSVGTALLDAYVKL 441
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN A +VF+ + KD+++WS+M+ GYA G +EA +F+ + +E +KP +T V+
Sbjct: 442 GNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVI 501
Query: 240 SACAS-LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+ACAS A E G ++ + + + + L+ MYAK G + A +VF+ K++D
Sbjct: 502 NACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDL 561
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WN+++SG S +G K A VF +++K + + TF+G++ CTHAGLV++G+++FNS
Sbjct: 562 VSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNS 621
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + P ++HY CM+DL R+G L++A +I MP P A VW LL R+H+ +
Sbjct: 622 MINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVE 681
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E +LI+L+P +S YVLLSN+Y+A+ W + +R +M + ++K G SW+EV
Sbjct: 682 LGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVK 741
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
+ FL GD +HPLS +IYSKL EL+ +LK AG+ P T +V DIE+E+K+ L+ HSE
Sbjct: 742 NKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSE 801
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LA+AFGLI T P+ I+I KNLRVCGDCH KL+S + R I+VRD+NRFH F +G C
Sbjct: 802 RLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLC 861
Query: 599 SCKDFW 604
SC D+W
Sbjct: 862 SCGDYW 867
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 221/428 (51%), Gaps = 6/428 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N + + E + M+ EG LP +T V+ A E +G++ H+++VK G
Sbjct: 165 LLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHG 224
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V SL++LY G L DA VFD + ++ V+W ++I+GY+ G E +F
Sbjct: 225 FEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFN 284
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+KP + V+ +C L +L+ K + ++G + V T+L+ +KC
Sbjct: 285 KMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCK 344
Query: 181 NMEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
M+ A +F M E K++VSW++MI G NG +A+++F M+RE +KP ++T +L
Sbjct: 345 EMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL 404
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+ + E+ + ++ N S+ V GT L+D Y K G A KVF ++ KD +
Sbjct: 405 TVHYPVFVSEM---HAEVIKTNYERSSSV-GTALLDAYVKLGNTIDAVKVFEIIEAKDLM 460
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W+A+++G + G + A +F QL K GI+PN TF ++ C E + F++
Sbjct: 461 AWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAY 520
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ L + +V + + G +D AHE+ K E + + W ++++G H +
Sbjct: 521 AIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISGYSQHGQAKK 579
Query: 420 AEHVLNQL 427
A V +++
Sbjct: 580 ALEVFDEM 587
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 212/425 (49%), Gaps = 21/425 (4%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ A+ + S+ + P T V CA D +LG + H VK GL V TSL
Sbjct: 75 KEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSL 134
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+++Y+ + D +VFD++ ++NVVSWT++++GY G +F ++ + G+ P+
Sbjct: 135 VDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNR 194
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+++ V+ A G + +H V + G + V SL+ LY++ G + AR VFD+
Sbjct: 195 YTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDK 254
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M +D V+W+SMI GY NG E ++F MQ +KP + T V+ +CASL L L
Sbjct: 255 MEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALV 314
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD-KDQVVWNAVVSGLSM 310
++ F ++ ++ T L+ +KC M A +F M++ K+ V W A++SG
Sbjct: 315 KLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQ 374
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC-------GCTHAGLVDEGRQFFNSMSRVF 363
NG A +F Q+ + G++PN T+ +L HA ++ + +S+
Sbjct: 375 NGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVG--- 431
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
T +++ Y LG + + E+I++ + + W A+LAG +T+ A +
Sbjct: 432 --TALLDAYV----KLGNTIDAVKVFEIIEAKDL----MAWSAMLAGYAQTGETEEAAKL 481
Query: 424 LNQLI 428
+QLI
Sbjct: 482 FHQLI 486
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 174/346 (50%), Gaps = 3/346 (0%)
Query: 84 ALKVFDDIPDK--NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
A +FD IP + + ++ Y + +EA+N+F LLH L+PD ++ V C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
D + +H + G +V V TSLVD+Y K N+ RRVFD+M E+++VSW+
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
S++ GY+ NG ++F MQ E + P YT+ V++A + G + +G+ + + ++
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
F + +LI +Y++ G + A VF +M+ +D V WN++++G NG F +F
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIF 283
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
+++ G++P TF ++ C + + + T I MV L +
Sbjct: 284 NKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMV-ALSK 342
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
++D+A L M N + W A+++GC + D A ++ +Q+
Sbjct: 343 CKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQM 388
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/593 (41%), Positives = 356/593 (60%), Gaps = 2/593 (0%)
Query: 14 AIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+E + M G + P + T VL A A + +G H+ K GL E V T L+
Sbjct: 204 ALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLI 263
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
+LY CG + A +FD + ++V++ A+ISGY G + ++ +F+ L+ GL+P S
Sbjct: 264 SLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSS 323
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++V ++ + G A +H +V +AG N V+T+L LY + +M+ ARR FD M
Sbjct: 324 TLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAM 383
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
PEK + SW++MI GYA NG + A+ +F MQ N++P T+ LSACA LGAL LG
Sbjct: 384 PEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGK 443
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
W + + N + T LIDMY KCG +A+A +F M +K+ V WN ++SG ++G
Sbjct: 444 WVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHG 503
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
A ++ + + P +TF+ +L C+H GLV EG F SM+ + +TP IEH
Sbjct: 504 QGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHC 563
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEP-NAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
CMVDLLGR+GQL EA ELI P +WGALL C +HK DLA+ +L LE
Sbjct: 564 TCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELE 623
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P N+G YVLLSN+Y++ ++++AA +R + + K GC+ +E+ H F+ GD +H
Sbjct: 624 PENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAH 683
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P S+ IY L++L K+ AG+ P T+ L+D+EEEEK++ + HSEKLA+AFGL+ T P
Sbjct: 684 PQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEP 743
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI KNLRVC DCH A K+ISK+T R I+VRD +RFH F +G CSC D+W
Sbjct: 744 GTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 225/492 (45%), Gaps = 41/492 (8%)
Query: 1 MIRGFVSNDCF--QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS------ 52
+ R F D F + ++R + P+ +F F A + G S
Sbjct: 80 LYRAFPRPDRFLRNSLLRSLPTLRADLLFPSPDSFSFAFAATSLASSCSRGGISPPSAAS 139
Query: 53 ------HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY 106
H+L V +G D FV ++L LY DA KVFD +P + V W +++G
Sbjct: 140 AALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL 199
Query: 107 INEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
EA+ F R+ G ++PDS ++ VL A ++ + + + +H + + G ++
Sbjct: 200 SG----SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQH 255
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
V T L+ LYAKCG+ME AR +FD+M D+V+++++I GY+ NG ++++F +
Sbjct: 256 EHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVG 315
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
L+P T+V ++ + G L + + + +N + T L +Y + M
Sbjct: 316 MGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDS 375
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
A + F M +K WNA++SG + NG ++A +F Q++ ++PN T L C
Sbjct: 376 ARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQ 435
Query: 346 AGLVDEGRQFFNSMS------RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP 399
G + G+ ++ V+ +T +I D+ + G + EA + SM +
Sbjct: 436 LGALSLGKWVHKIIANEKLELNVYVMTALI-------DMYVKCGSIAEARCIFDSMDNK- 487
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYVLLSNIYSASHKW---NDA 454
N + W +++G LH + A + ++ L P +S LS +Y+ SH
Sbjct: 488 NVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSS---TFLSVLYACSHGGLVKEGT 544
Query: 455 AKIRSMMGDKGI 466
RSM D GI
Sbjct: 545 TVFRSMTSDYGI 556
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 117/245 (47%), Gaps = 8/245 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N + A+ + M+ P T L ACA+ LG H +I
Sbjct: 394 MISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEK 453
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + +V T+L+++YV CG +A+A +FD + +KNVVSW +ISGY G EA+ +++
Sbjct: 454 LELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYK 513
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI-HGYVNEAGKGRNVFVATSLVDLYAKC 179
++ L P S + + VL AC+ G + + ++ G + T +VDL +
Sbjct: 514 DMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRA 573
Query: 180 GNMEKARRVFDQMPEKDIVS--WSSMIQG---YASNGFPKEALDMFYNMQRENLKPEYYT 234
G +++A + + P+ + W +++ + K A + ++ EN YY
Sbjct: 574 GQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTG--YYV 631
Query: 235 MVGVL 239
++ L
Sbjct: 632 LLSNL 636
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/593 (41%), Positives = 372/593 (62%), Gaps = 9/593 (1%)
Query: 21 MRNEGFL-----PTNFT-FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
++N FL P N + +L++C + G + H+ ++ +GL D + T L++L
Sbjct: 48 VQNPAFLSPCPYPYNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDL 107
Query: 75 YVHCGYLADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSF 132
Y CG ++ A ++FD++P++ NV W +I Y +G E AI ++R +L G ++PD+F
Sbjct: 108 YASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNF 167
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ VL AC L DL + +H V +VFV L+D+YAKCG +++A VFD
Sbjct: 168 TYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDST 227
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
+D V W+SMI NG P EAL + NM E + P T+V +SA A GAL G
Sbjct: 228 TVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGR 287
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ R F S L T+L+DMYAK G + A +F ++ ++ + WNA++ G M+G
Sbjct: 288 ELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHG 347
Query: 313 YVKVAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
+ A +F ++ + + P+ TFVG+L C H G+V E ++ F+ M V+S+ PM++H
Sbjct: 348 HADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQH 407
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
Y C+VD+LG SG+ EA ++IK M ++P++ +WGALL GC++HK +LAE L++LI LE
Sbjct: 408 YTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELE 467
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P ++GNYVLLSNIY+ S KW +AA++R +M ++G++KI CSW+E+ G H FLVGD SH
Sbjct: 468 PEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASH 527
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P S++IY +L+ L + G+VP T V ++E++EK+ + HSE+LA+AFGLI+T P
Sbjct: 528 PRSDEIYEELERLEGLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPP 587
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ + KNLRVC DCH IKLIS+I REII+RD NR+H F+ G CSCKD W
Sbjct: 588 GTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 173/339 (51%), Gaps = 6/339 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR + + + AIE Y M G + P NFT+P VLKACA D G H +++
Sbjct: 136 LIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRT 195
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D FV L+++Y CG + +A VFD ++ V W ++I+ G EA+ +
Sbjct: 196 SWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALC 255
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R + G+ P ++V ++A G L + +HGY G G + TSL+D+YAK
Sbjct: 256 RNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKS 315
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGV 238
G + AR +FDQ+ ++++SW++MI G+ +G A ++F M+ E + P++ T VGV
Sbjct: 316 GWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGV 375
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK 296
LSAC G ++ M + P++ T L+D+ GR +A V + M K
Sbjct: 376 LSACNHGGMVQEAKEVFDLMV-TVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVK 434
Query: 297 -DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
D +W A+++G ++ V++A +L + + GN
Sbjct: 435 PDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGN 473
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 249/595 (41%), Positives = 364/595 (61%), Gaps = 6/595 (1%)
Query: 14 AIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+E + M + G + P + T L+A A +G H VK GL E V T L+
Sbjct: 195 ALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLM 254
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
+LY CG + A +FD + + ++V++ A+ISGY G +E ++ +F+ L G +P+S
Sbjct: 255 SLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSS 314
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++V V+ + G A+ +H +V +A + V+T+L LY + +ME AR +FD M
Sbjct: 315 TLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAM 374
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
EK + SW++MI GYA NG + A+ +F MQ N++P T+ LSACA LGAL LG
Sbjct: 375 LEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGK 434
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
W + + + N + T LIDMYAKCG +A+A +F M +K+ V WNA++SG ++G
Sbjct: 435 WVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHG 494
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
A ++ + I P +TF+ ++ C+H GLVDEG++ F M+ + +TP IEH
Sbjct: 495 QGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHC 554
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAI---VWGALLAGCRLHKKTDLAEHVLNQLIA 429
CMVDLLGR+G+L+EA ELI P +AI VWGALL C +HK +DLA+ +L
Sbjct: 555 TCMVDLLGRAGKLNEALELISEFPQ--SAIGPGVWGALLGACMVHKNSDLAKLASQKLFE 612
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
L+ N+G YVLLSN+Y++ +++AA +R + + K GC+ +E+ H F+ GD+
Sbjct: 613 LDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDH 672
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
HP SE IYS L+ L K+ AG+ P T+ L+D+EEEEK++ + HSEKLA+AFGL++T
Sbjct: 673 LHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLST 732
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P IRI KNLRVC DCH A K ISK+T R I+VRD +RFH F +G CSC D+W
Sbjct: 733 EPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 221/467 (47%), Gaps = 33/467 (7%)
Query: 1 MIRGFVSNDCF--QHAIEFYNSMRNEGFLPTNFTFPFVLKACA-------REHDFQLGVR 51
+ R F D F + S+R P+ +F F A + R +D
Sbjct: 76 LFRAFPCPDRFLRNALLRSLPSLRPHLLFPSPDSFSFAFAATSLSSSCSSRGNDAAAART 135
Query: 52 SHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGN 111
H L V AG D FV ++L LY DA KVFD +P + + W +++G
Sbjct: 136 LHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG--- 192
Query: 112 LEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
EA+ F R++ G ++PDS ++ L A + ++ + +HGY + G + V T
Sbjct: 193 -SEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVT 251
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
L+ LY+KCG+M+ A+ +FD+M D+V+++++I GY+ NG + ++++F + +P
Sbjct: 252 GLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRP 311
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
T+V V+ + G L +F+ + ++ ++ T L +Y + M A +F
Sbjct: 312 NSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIF 371
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M +K WNA++SG + NG ++A +F +++ +QPN T L C H G +
Sbjct: 372 DAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALS 431
Query: 351 EGRQFFNSMSR------VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
G+ +S+ V+ +T +I D+ + G + EA + M + N + W
Sbjct: 432 LGKWVHRIISKEKLELNVYVMTALI-------DMYAKCGSIAEARSIFDRMDNK-NVVSW 483
Query: 405 GALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYVLLSNIYSASH 449
A+++G LH + A + ++ + P +S LS IY+ SH
Sbjct: 484 NAMISGYGLHGQGAEALKLYKDMLDARILPTSS---TFLSVIYACSH 527
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 171/384 (44%), Gaps = 56/384 (14%)
Query: 129 PDSFSIVRVLTACTQL-----GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
PDSFS T+ + D + A+ +HG AG + FVA++L LY K +
Sbjct: 107 PDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGD 166
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLKPEYYTMVGVLSAC 242
AR+VFD +P D + W++++ G + EAL+ F M ++P+ T+ L A
Sbjct: 167 DARKVFDTVPSPDTILWNTLLAGLPGS----EALEAFVRMVDAGRVRPDSTTLASSLRAA 222
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
A + +G + + + + T L+ +Y+KCG M A +F M + D V +N
Sbjct: 223 AEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYN 282
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG-----------LLCGCTHAGLV-- 349
A++SG S+NG V+ + +F +L G +PN +T V LL C HA +V
Sbjct: 283 ALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKA 342
Query: 350 ----------------------DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+ R F++M L +E + M+ ++G +
Sbjct: 343 RLDADALVSTALTTLYCRLNDMESARSIFDAM-----LEKTMESWNAMISGYAQNGLTEM 397
Query: 388 A---HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL--LS 442
A +L++ + ++PN I + L+ C L + V +++I+ E YV+ L
Sbjct: 398 AVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWV-HRIISKEKLELNVYVMTALI 456
Query: 443 NIYSASHKWNDAAKIRSMMGDKGI 466
++Y+ +A I M +K +
Sbjct: 457 DMYAKCGSIAEARSIFDRMDNKNV 480
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N + A+ + M+ P T L ACA LG H +I K
Sbjct: 385 MISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEK 444
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + +V T+L+++Y CG +A+A +FD + +KNVVSW A+ISGY G EA+ +++
Sbjct: 445 LELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYK 504
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L + P S + + V+ AC+ G + K NE + T +VDL +
Sbjct: 505 DMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRA 564
Query: 180 GNMEKARRVFDQMPEKDIVS--WSSMIQG---YASNGFPKEALDMFYNMQRENLKPEYYT 234
G + +A + + P+ I W +++ + ++ K A + + EN YY
Sbjct: 565 GKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAG--YYV 622
Query: 235 MVGVL 239
++ L
Sbjct: 623 LLSNL 627
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/607 (40%), Positives = 377/607 (62%), Gaps = 7/607 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ +N A+ + SMR + +F V+K CA + + + H +VK G
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
D+ ++T+L+ Y C + DAL++F +I NVVSWTA+ISG++ EEA+++F
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLF 385
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G++P+ F+ +LTA + + +H V + R+ V T+L+D Y K
Sbjct: 386 SEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAYVKL 441
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E+A +VF + +KDIV+WS+M+ GYA G + A+ MF + + +KP +T +L
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Query: 240 SACASLGA-LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+ CA+ A + G F ++ S+ + + L+ MYAK G + A +VF+ ++KD
Sbjct: 502 NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WN+++SG + +G A VF +++K ++ +G TF+G+ CTHAGLV+EG ++F+
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI 621
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M R + P EH CMVDL R+GQL++A ++I++MP + +W +LA CR+HKKT+
Sbjct: 622 MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTE 681
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L ++IA++P +S YVLLSN+Y+ S W + AK+R +M ++ ++K G SW+EV
Sbjct: 682 LGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVK 741
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
+ FL GD SHPL ++IY KL++L+T+LK G+ P T +VL DI++E K+ LA HSE
Sbjct: 742 NKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSE 801
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF-IEGS 597
+LA+AFGLI T + I KNLRVCGDCH IKLI+KI REI+VRD+NRFH F +G
Sbjct: 802 RLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGV 861
Query: 598 CSCKDFW 604
CSC DFW
Sbjct: 862 CSCGDFW 868
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 215/435 (49%), Gaps = 21/435 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GF + Q A + ++ G F VLK A D G + H +K G
Sbjct: 64 LLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFG 123
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V TSL++ Y+ D KVFD++ ++NVV+WT +ISGY +E + +F
Sbjct: 124 FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFM 183
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ + G +P+SF+ L + G +H V + G + + V+ SL++LY KCG
Sbjct: 184 RMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCG 243
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ KAR +FD+ K +V+W+SMI GYA+NG EAL MFY+M+ ++ + V+
Sbjct: 244 NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIK 303
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CA+L L + + FL + + T L+ Y+KC M A ++F+E+ VV
Sbjct: 304 LCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVV 363
Query: 301 -WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC-------THAGLVDEG 352
W A++SG N + A +F ++++ G++PN T+ +L HA +V
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTN 423
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+ +++ ++D + G+++EA ++ + + + + W A+LAG
Sbjct: 424 YERSSTVGT------------ALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYA 470
Query: 413 LHKKTDLAEHVLNQL 427
+T+ A + +L
Sbjct: 471 QTGETEAAIKMFGEL 485
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 159/335 (47%), Gaps = 1/335 (0%)
Query: 76 VHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIV 135
V L +A +FD P ++ S+ +++ G+ +G +EA +F + G++ D
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 136 RVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
VL L D + +H + G +V V TSLVD Y K N + R+VFD+M E+
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
++V+W+++I GYA N E L +F MQ E +P +T L A G G+
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
+ + +N + +LI++Y KCG + +A +F + + K V WN+++SG + NG
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A G+F + ++ + ++F ++ C + + Q S+ + L M
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
V + LD A L K + N + W A+++G
Sbjct: 338 VAYSKCTAMLD-ALRLFKEIGCVGNVVSWTAMISG 371
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/577 (40%), Positives = 358/577 (62%), Gaps = 1/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + +LK C + + G H ++ + D ++ SLL +Y CG L A ++
Sbjct: 72 PDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRL 131
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD++P +++VSWT++I+GY +A+ +F R+L G +P+ F++ ++ C +
Sbjct: 132 FDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASY 191
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ + IH + G NVFV +SLVD+YA+CG + +A VFD++ K+ VSW+++I GY
Sbjct: 192 NCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGY 251
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A G +EAL +F MQRE +P +T +LS+C+S+G LE G W + + ++
Sbjct: 252 ARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVG 311
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+G TL+ MYAK G + A KVF ++ D V N+++ G + +G K A F ++ +
Sbjct: 312 YVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRF 371
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI+PN TF+ +L C+HA L+DEG+ +F M R +++ P + HY +VDLLGR+G LD+
Sbjct: 372 GIEPNDITFLSVLTACSHARLLDEGKHYFGLM-RKYNIEPKVSHYATIVDLLGRAGLLDQ 430
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A I+ MP+EP +WGALL ++HK T++ + ++ L+P G + LL+NIY++
Sbjct: 431 AKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYAS 490
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +W D AK+R +M D G++K CSWVEV+ VH F+ D +HP EKI+ ++L K
Sbjct: 491 AGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQK 550
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
+K G+VP T HVL ++++EK+ L HSEKLAL+F L+ T P IRI KN+RVCGDC
Sbjct: 551 IKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDC 610
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H AIK +S + REIIVRD NRFH F +G CSC D+W
Sbjct: 611 HSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 168/312 (53%), Gaps = 1/312 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ ND A+ + M ++G P FT ++K C + G + H+ K G
Sbjct: 146 MITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYG 205
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +SL+++Y CGYL +A+ VFD + KN VSW A+I+GY +G EEA+ +F
Sbjct: 206 CHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFV 265
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G +P F+ +L++C+ +G L KW+H ++ ++ + +V +L+ +YAK G
Sbjct: 266 RMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSG 325
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +VFD++ + D+VS +SM+ GYA +G KEA F M R ++P T + VL+
Sbjct: 326 SIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLT 385
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV- 299
AC+ L+ G M + T++D+ + G + QA EM + V
Sbjct: 386 ACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVA 445
Query: 300 VWNAVVSGLSMN 311
+W A++ M+
Sbjct: 446 IWGALLGASKMH 457
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 177/326 (54%), Gaps = 9/326 (2%)
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
L+PD +L CTQLG L K +H +V + ++ + SL+ +YA+CG++E AR
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
R+FD+MP +D+VSW+SMI GYA N +AL +F M + +P +T+ ++ C +
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
+ G + + SN +G++L+DMYA+CG + +A VF ++ K++V WNA+++
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G + G + A +F ++++ G +P T+ LL C+ G +++G+ + + S
Sbjct: 250 GYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMK--SSQ 307
Query: 367 PMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
++ + G ++ + +SG + +A ++ + ++ + + ++L G H A +
Sbjct: 308 KLVGYVGNTLLHMYAKSGSIRDAEKVFDKL-VKVDVVSCNSMLIGYAQHGLGKEAAQQFD 366
Query: 426 QLI--ALEPWNSGNYVLLSNIYSASH 449
++I +EP + LS + + SH
Sbjct: 367 EMIRFGIEP---NDITFLSVLTACSH 389
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+L+P+ +L C LG L+ G + + F + V+ +L+ MYA+CG + A
Sbjct: 69 SLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGA 128
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
++F EM +D V W ++++G + N A +F ++ G +PN T L+ C +
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188
Query: 347 GLVDEGRQF------FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
+ GRQ + S VF + +VD+ R G L EA + + + N
Sbjct: 189 ASYNCGRQIHACCWKYGCHSNVFVGSS-------LVDMYARCGYLGEAMLVFDKLGCK-N 240
Query: 401 AIVWGALLAG 410
+ W AL+AG
Sbjct: 241 EVSWNALIAG 250
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/605 (39%), Positives = 363/605 (60%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI F + I M+ G P + T +L + + G H+ ++
Sbjct: 181 MIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNF 240
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ ++T+LL++Y C L A K+F+ + KN V W+A+I GY+ ++ +A+ ++
Sbjct: 241 FFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYD 300
Query: 121 RLL-HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L GL P ++ +L AC QL DL K +H ++ ++G + V SL+ +YAKC
Sbjct: 301 DMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKC 360
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G M+ A D+M KD VS+S++I G NG+ ++AL +F MQ + P TM+ +L
Sbjct: 361 GIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALL 420
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+ L AL+ G + F ++ + +IDMY+KCG++ + ++F M+++D +
Sbjct: 421 PACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDII 480
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN ++ G ++G A +F +L+ G++P+ T + +L C+H+GLV EG+ +F+SM
Sbjct: 481 SWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSM 540
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
S+ F++ P + HY CMVDLL R+G LDEA+ I+ MP PN +WGALLA CR HK ++
Sbjct: 541 SQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEM 600
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E V ++ L P +GN+VL+SNIYS+ +W+DAA IRS+ G +K GCSWVE+ G
Sbjct: 601 GEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISG 660
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V+H F+ G SHP S I KL EL ++K G+ + VL D+EEEEK+ L HSEK
Sbjct: 661 VIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEK 720
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
+A+AFG++ T+P I + KNLR+C DCH AIK I+ +T REI VRD +RFH F +G C+
Sbjct: 721 VAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICN 780
Query: 600 CKDFW 604
C+DFW
Sbjct: 781 CQDFW 785
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 219/433 (50%), Gaps = 5/433 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR + + FQ +I Y M G PTNFTFPF+LKAC+ QLG H+ G
Sbjct: 78 MIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILG 137
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINM 118
L D +V T+LL++Y CG+L A +F+ I D+++V+W A+I+ + + I+
Sbjct: 138 LSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHS 197
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
++ G+ P+S ++V +L Q L K IH Y NV + T+L+D+YAK
Sbjct: 198 VAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAK 257
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVG 237
C + AR++F+ + +K+ V WS+MI GY + +AL ++ +M L P T+
Sbjct: 258 CHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLAT 317
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+L ACA L L+ G M ++ + +G +LI MYAKCG M A EM KD
Sbjct: 318 MLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKD 377
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V ++A++SG NGY + A +F Q++ GI P T + LL C+H + G +
Sbjct: 378 TVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHG-TCCH 436
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
+ V T ++D+ + G++ + E+ M + I W ++ G +H
Sbjct: 437 GYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRM-QNRDIISWNTMIIGYGIHGLC 495
Query: 418 DLAEHVLNQLIAL 430
A + +L AL
Sbjct: 496 VEALSLFQELQAL 508
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 168/332 (50%), Gaps = 7/332 (2%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A VFD IP +VV W +I Y G +++I ++ +L G+ P +F+ +L AC+
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSWS 201
L L + IH + + G +++V+T+L+ +YAKCG++ +A+ +F+ + ++DIV+W+
Sbjct: 120 LQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWN 179
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+MI ++ + + + MQ+ + P T+V +L AL G ++ RN
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRN 239
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
F N VL T L+DMYAKC + A K+F + K+ V W+A++ G ++ + A ++
Sbjct: 240 FFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALY 299
Query: 322 -GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLL 379
L G+ P T +L C + G++ M + L + ++ +
Sbjct: 300 DDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVG--NSLISMY 357
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ G +D A + M + + + + A+++GC
Sbjct: 358 AKCGIMDNAVGFLDEM-IAKDTVSYSAIISGC 388
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 125/248 (50%), Gaps = 4/248 (1%)
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
AT L + ++ AR VFDQ+P+ +V W+ MI+ YA +G ++++ ++ +M + +
Sbjct: 44 ATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGV 103
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
P +T +L AC+SL AL+LG + + + T L+ MYAKCG + QA
Sbjct: 104 TPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQT 163
Query: 289 VFREM--KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
+F + +D+D V WNA+++ S + Q+++ G+ PN +T V +L A
Sbjct: 164 LFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA 223
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
+ +G+ R F ++ ++D+ + L A ++ ++ + N + W A
Sbjct: 224 NALHQGKAIHAYYIRNFFFDNVVLQTA-LLDMYAKCHLLFYARKIFNTVN-KKNDVCWSA 281
Query: 407 LLAGCRLH 414
++ G LH
Sbjct: 282 MIGGYVLH 289
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/628 (39%), Positives = 374/628 (59%), Gaps = 37/628 (5%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
I FY +R+ G +FP +LKA ++ G+ H K D FV+T L++
Sbjct: 98 TILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMD 157
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG + A VFD++ ++VV+W +I Y G L+EA +F + + PD
Sbjct: 158 MYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMI 217
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNE-----------------AGKG------------- 163
+ +++AC + G++ + I+ ++ E AG G
Sbjct: 218 LCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMS 277
Query: 164 -RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
RN+FV+T++V Y+K G ++ AR +FDQ KD+V W++MI YA + P+EAL +F
Sbjct: 278 VRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEE 337
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M +KP+ TM+ V+SAC +LG L+ W + N S + LI+MYAKCG
Sbjct: 338 MCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGG 397
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ A VF +M ++ V W+++++ +M+G + +F Q+++ ++PN TFVG+L G
Sbjct: 398 LDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYG 457
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
C+H+GLV+EG++ F SM+ +++TP IEHYGCMVDL GR+ L EA E+I+SMPM PN +
Sbjct: 458 CSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVV 517
Query: 403 VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMG 462
+WG+L++ CR+H + +L E +++ LEP + G VL+SNIY+ ++W+ IR +M
Sbjct: 518 IWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIME 577
Query: 463 DKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLF 522
K + K +G S ++++G HEFL+GD H S +IY+KL E+ +KLK AG+VP VL
Sbjct: 578 KKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLV 637
Query: 523 DIEEEEKQYFLACHSEKLALAFGLITTAPKD------VIRIAKNLRVCGDCHEAIKLISK 576
D+EEEEK+ + HSEKLAL FGL+ ++ VIRI KNLRVC DCH KL+SK
Sbjct: 638 DVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSK 697
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ EIIVRD RFH + +G CSC+D+W
Sbjct: 698 VYELEIIVRDRTRFHRYKDGLCSCRDYW 725
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 185/415 (44%), Gaps = 37/415 (8%)
Query: 84 ALKVFDDI-PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT 142
AL +F I P + + +++ G I ++R+ H G + D S +L A +
Sbjct: 66 ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
++ L +HG+ + + FV T L+D+YA CG + AR VFD+M ++D+V+W++
Sbjct: 126 KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNT 185
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
MI+ Y G EA +F M+ N+ P+ + ++SAC G + F+ N+
Sbjct: 186 MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEND 245
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
+ L T L+ MYA G M A + FR+M ++ V A+VSG S G + A +F
Sbjct: 246 VRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFD 305
Query: 323 QLEK-------------------------------CGIQPNGNTFVGLLCGCTHAGLVDE 351
Q E GI+P+ T + ++ C + G +D+
Sbjct: 306 QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDK 365
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ + + + + L ++ ++++ + G LD A ++ + MP N + W +++
Sbjct: 366 AK-WVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTR-NVVSWSSMINAF 423
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKW--NDAAKIRSMMGDK 464
+H + + + Q+ E + +Y SH + KI + M D+
Sbjct: 424 AMHGEASDSLSLFAQM-KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDE 477
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/607 (40%), Positives = 365/607 (60%), Gaps = 4/607 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE--GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
++ G+ N A+E M+ E G P + T VL ACA H+ ++
Sbjct: 88 VVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALR 147
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
AGLD V T++L+ Y CG + A VFD +P +N VSW A+I GY + GN EA+ +
Sbjct: 148 AGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMAL 207
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F R++ G+ S++ L AC +LG L + +H + G NV V +L+ YAK
Sbjct: 208 FWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAK 267
Query: 179 CGNMEKARRVFDQMPEKDI-VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
C + A +VF+++ K +SW++MI G+ N P++A +F MQ EN++P+ +T+V
Sbjct: 268 CKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVS 327
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
V+ A A + W + R++ + + T LIDMY+KCGR++ A ++F +D+
Sbjct: 328 VIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRH 387
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+ WNA++ G +G+ + A +F +++ G PN TF+ +L C+HAGLVDEG+++F
Sbjct: 388 VITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFA 447
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
SM + + L P +EHYG MVDLLGR+G+LDEA IK+MP+EP V+GA+L C+LHK
Sbjct: 448 SMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNV 507
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
+LAE + L P +VLL+NIY+ + W D A++R+ M KG+QK G S +++
Sbjct: 508 ELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQL 567
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
VH F G +H ++ IY++L +L ++K G+VP TD + D+E++ K L HS
Sbjct: 568 KNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSI-HDVEDDVKAQLLNTHS 626
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EKLA+A+GLI TAP I+I KNLRVC DCH A KLIS +TGREII+RD RFH F +G
Sbjct: 627 EKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGK 686
Query: 598 CSCKDFW 604
CSC D+W
Sbjct: 687 CSCGDYW 693
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 194/390 (49%), Gaps = 5/390 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P TF +LK CA D G H+ + GL + T+L N+Y C ADA +V
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR--GLKPDSFSIVRVLTACTQLG 145
FD +P ++ V+W A+++GY G A+ R+ G +PDS ++V VL AC
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
L + +H + AG V V+T+++D Y KCG +E AR VFD MP ++ VSW++MI
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GYA NG EA+ +F+ M +E + +++ L AC LG L+ + R S
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKD-QVVWNAVVSGLSMNGYVKVAFGVFGQL 324
N + LI YAKC R A +VF E+ +K ++ WNA++ G + N + A +F ++
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ ++P+ T V ++ + R + + S L + ++D+ + G+
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQAR-WIHGYSIRHQLDQDVYVLTALIDMYSKCGR 372
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ A L S + + I W A++ G H
Sbjct: 373 VSIARRLFDS-ARDRHVITWNAMIHGYGSH 401
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 152/317 (47%), Gaps = 8/317 (2%)
Query: 134 IVRVLTA----CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
++R TA C DL+T + +H + G +T+L ++Y KC ARRVF
Sbjct: 15 VLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVF 74
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN--LKPEYYTMVGVLSACASLGA 247
D+MP +D V+W++++ GYA NG P A++ MQ E +P+ T+V VL ACA A
Sbjct: 75 DRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARA 134
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
L +F R + T ++D Y KCG + A VF M ++ V WNA++ G
Sbjct: 135 LHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDG 194
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
+ NG A +F ++ + G+ + + L C G +DE R+ + RV L+
Sbjct: 195 YADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRV-GLSS 253
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ ++ + + D A ++ + + I W A++ G ++ + AE + ++
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313
Query: 428 IALEPWNSGNYVLLSNI 444
LE ++ L+S I
Sbjct: 314 -QLENVRPDSFTLVSVI 329
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/604 (40%), Positives = 355/604 (58%), Gaps = 33/604 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR +V+N+ + A+ + M + F P ++TFP VLKAC+ + ++G++ H IVK G
Sbjct: 108 MIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVG 167
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + F+ +L+ +Y CG L +A KV D +P ++VVSW ++++GY G ++A+ +
Sbjct: 168 LDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEI-- 225
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
C ++ L+ ++AG + S V Y
Sbjct: 226 --------------------CKEMDSLNLN-------HDAG----TMASLSPVVCYTSLE 254
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N++ +F++M +K+++SW+ MI Y +N P EA+ +F M+ +KP+ T+ +L
Sbjct: 255 NVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLP 314
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC L AL LG ++E+ N +L L+DMYAKCG + +A VF +M+ +D V
Sbjct: 315 ACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVS 374
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++S +G A +F ++ G P+ FV +L C+H GL+D+GR +F M+
Sbjct: 375 WTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMT 434
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P IEH+ CMVDL GR+G+++EA+ IK MPMEPN VWGALL+ CR+H K D+
Sbjct: 435 EQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIG 494
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ L L P SG YVLLSNIY+ + W D +R M GI+K+ G S VE++G
Sbjct: 495 LVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQ 554
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL GD HP ++ IY +LD L K+K G++P T+ L D+E E+K+ LA HSEKL
Sbjct: 555 VHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKL 614
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+ F ++ T IRI KNLRVCGDCH AIKLISKI R IIVRD NRFH F G CSC
Sbjct: 615 AIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSC 674
Query: 601 KDFW 604
D+W
Sbjct: 675 GDYW 678
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 182/381 (47%), Gaps = 40/381 (10%)
Query: 35 FVLKACAREHDFQLGVRS----HS-LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFD 89
F +AC D G+++ HS +++ L D + L+ Y G + A +FD
Sbjct: 36 FSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFD 95
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+KNVV + +I Y+N EA+++F+ +L PD ++ VL AC+ L +L
Sbjct: 96 RSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRV 155
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+H + + G N+F+ +LV +Y KCG + +AR+V DQMP +D+VSW+SM+ GYA
Sbjct: 156 GLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQ 215
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+G +AL++ M NL + TM ASL V + +E +++ N
Sbjct: 216 SGQFDDALEICKEMDSLNLNHDAGTM-------ASLSP----VVCYTSLENVQYIHN--- 261
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
+F M K+ + WN +++ N A +F Q+E+CG+
Sbjct: 262 -------------------MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGM 302
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+P+ T LL C + GR+ + + +L P + ++D+ + G L+EA
Sbjct: 303 KPDAVTIASLLPACGDLSALFLGRRLHKYIEK-GNLRPNLLLENALLDMYAKCGCLEEAR 361
Query: 390 ELIKSMPMEPNAIVWGALLAG 410
++ M + + + W ++++
Sbjct: 362 DVFDKMRLR-DVVSWTSMMSA 381
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/552 (42%), Positives = 349/552 (63%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ + G+ D V LL + L A +F+ + +++ VSW+ +I G++ G+
Sbjct: 23 HAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDY 82
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
E FR L+ G KPD+FS+ V+ AC L + IH V + G + FV ++L
Sbjct: 83 ERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTL 142
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
VD+YAKCG ++ A+++FD+MP+KD+V+ + MI GYA G P E+ +F M+R+ P+
Sbjct: 143 VDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDK 202
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
MV +++ACA LGA+ ++ + + LGT +IDMYAKCG + + ++F
Sbjct: 203 VAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDR 262
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M+ K+ + W+A++ +G + A +F + GI PN TF+ LL C+HAGLVD+G
Sbjct: 263 MEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDG 322
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
Q F+ MS + + P ++HY CMVDLLGR+G+LD+A LI++M +E + +W A L CR
Sbjct: 323 LQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACR 382
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
+H++ DLAE L++L+ N G+Y+LLSNIY+ + +W D AKIR++M + ++KI G
Sbjct: 383 IHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGY 442
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF 532
+W+EVD +++ F GDNSH S +IY L L+ KL++AG+VP T+ VL D++EE K
Sbjct: 443 TWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKLGI 502
Query: 533 LACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
L HSEKLA+AFGLI T IRI KNLRVCGDCH KL+S IT R+IIVRD NRFH
Sbjct: 503 LHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANRFHH 562
Query: 593 FIEGSCSCKDFW 604
F EG CSC D+W
Sbjct: 563 FKEGICSCGDYW 574
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 186/319 (58%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GFV N ++ + + + G P NF+ PFV+KAC +G HS ++K G
Sbjct: 72 MIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNG 131
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D FV ++L+++Y CG + +A ++FD +P K++V+ T +I+GY G E+ +F
Sbjct: 132 LHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFD 191
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G PD ++V ++ AC +LG ++ A+ +H YV +V + T+++D+YAKCG
Sbjct: 192 QMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCG 251
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ +R +FD+M +K+++SWS+MI Y +G +EAL++F+ M + P T + +L
Sbjct: 252 SIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLY 311
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G ++ G+ S M + + V T ++D+ + GR+ QA ++ M+ +KD+
Sbjct: 312 ACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDE 371
Query: 299 VVWNAVVSGLSMNGYVKVA 317
+W A + ++ V +A
Sbjct: 372 GIWCAFLGACRIHRQVDLA 390
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 164/342 (47%), Gaps = 20/342 (5%)
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
+ PD F + L C + + K +H V G ++ VA L+ + AK ++ A
Sbjct: 1 MDPDFF--ISTLFKCRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAH 55
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
+F++M E+D VSWS MI G+ NG + F + R KP+ +++ V+ AC
Sbjct: 56 LLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTM 115
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
L +G S + +N + + +TL+DMYAKCG + A ++F M KD V +++
Sbjct: 116 GLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIA 175
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSL 365
G + G ++ +F Q+ + G P+ V ++ C G +++ R + + +R +SL
Sbjct: 176 GYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSL 235
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
+E M+D+ + G +D + E+ M + N I W A++ H + A + +
Sbjct: 236 D--VELGTAMIDMYAKCGSIDSSREIFDRME-QKNVISWSAMIGAYGYHGQGREALELFH 292
Query: 426 QLIALEPWNSG----NYVLLSNIYSASHKW--NDAAKIRSMM 461
++ NSG +S +Y+ SH +D ++ S+M
Sbjct: 293 MML-----NSGIIPNRITFISLLYACSHAGLVDDGLQLFSLM 329
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/608 (40%), Positives = 363/608 (59%), Gaps = 4/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G N A+ M EG T VL C D L + H VK G
Sbjct: 139 MLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHG 198
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + FV +L+++Y G L +A VF + +++V+W +IIS G + A+ +F
Sbjct: 199 LSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFH 258
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-KGRNVFVATSLVDLYAKC 179
++ G+ PD ++V + +A Q GD AK +H YV G ++ ++VD+YAK
Sbjct: 259 GMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKM 318
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVGV 238
++ A++VFD +P++D+VSW+++I GY NG EA+ ++ +M E LKP T V V
Sbjct: 319 SKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSV 378
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L A + LG L+ G+ + + + + T LID+YAKCG++ +A +F M +
Sbjct: 379 LPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRST 438
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WNA+++GL ++G+ A +F Q+++ I+P+ TFV LL C+HAGLVD+GR FF+
Sbjct: 439 GPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDL 498
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M V+ + P+ +HY CMVD+LGR+GQLDEA E I+SMP++P++ VWGALL CR+H +
Sbjct: 499 MQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVE 558
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
+ + L L+P N G YVL+SN+Y+ KW+ +RS++ + +QK G S +EV
Sbjct: 559 MGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVK 618
Query: 479 GVVHEFLVGDNS--HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
G V F G + HP E+I L +L K+K+AG+VP VL D+EE+EK+ L H
Sbjct: 619 GSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNH 678
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SE+LA+AFG+I T P + I KNLRVCGDCH A K ISKIT REIIVRD NRFH F +G
Sbjct: 679 SERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDG 738
Query: 597 SCSCKDFW 604
CSC DFW
Sbjct: 739 HCSCGDFW 746
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 212/404 (52%), Gaps = 10/404 (2%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALK 86
P +FTFP +++A + H+ ++ GL + F SL++ Y+ G +A+A +
Sbjct: 67 PDSFTFPPLVRAAPGPAS---AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYR 123
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
VFD++P+++V +W A++SG +A+ + R++ G+ D+ ++ VL C LGD
Sbjct: 124 VFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGD 183
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
+ A +H Y + G +FV +L+D+Y K G + +A VF M +D+V+W+S+I
Sbjct: 184 RALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISA 243
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA-SSFMERNEF-L 264
G A+++F+ M + P+ T+V + SA A G ELG + ++ R + +
Sbjct: 244 NEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGD-ELGAKSVHCYVRRRGWDV 302
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ + G ++DMYAK ++ A KVF + D+D V WN +++G NG A ++ +
Sbjct: 303 GDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDM 362
Query: 325 EKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
G++P TFV +L ++ G + +G + +++S L + C++DL + G
Sbjct: 363 HNHEGLKPIQGTFVSVLPAYSYLGGLQQGMR-MHALSIKTGLNLDVYVTTCLIDLYAKCG 421
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+L EA L + MP W A++AG +H A + +Q+
Sbjct: 422 KLVEAMFLFEHMPRRSTG-PWNAIIAGLGVHGHGAKALSLFSQM 464
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/604 (40%), Positives = 355/604 (58%), Gaps = 33/604 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR +V+N+ + A+ + M + F P ++TFP VLKAC+ + ++G++ H IVK G
Sbjct: 108 MIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVG 167
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + F+ +L+ +Y CG L +A KV D +P ++VVSW ++++GY G ++A+ +
Sbjct: 168 LDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEI-- 225
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
C ++ L+ ++AG + S V Y
Sbjct: 226 --------------------CKEMDSLNLN-------HDAG----TMASLSPVVCYTSLE 254
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N++ +F++M +K+++SW+ MI Y +N P EA+ +F M+ +KP+ T+ +L
Sbjct: 255 NVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLP 314
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC L AL LG ++E+ N +L L+DMYAKCG + +A VF +M+ +D V
Sbjct: 315 ACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVS 374
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++S +G A +F ++ G P+ FV +L C+H GL+D+GR +F M+
Sbjct: 375 WTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMT 434
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P IEH+ CMVDL GR+G+++EA+ IK MPMEPN VWGALL+ CR+H K D+
Sbjct: 435 EQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIG 494
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ L L P SG YVLLSNIY+ + W D +R M GI+K+ G S VE++G
Sbjct: 495 LVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQ 554
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL GD HP ++ IY +LD L K+K G++P T+ L D+E E+K+ LA HSEKL
Sbjct: 555 VHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKL 614
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+ F ++ T IRI KNLRVCGDCH AIKLISKI R IIVRD NRFH F G CSC
Sbjct: 615 AIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSC 674
Query: 601 KDFW 604
D+W
Sbjct: 675 GDYW 678
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 191/407 (46%), Gaps = 47/407 (11%)
Query: 16 EFYNSMRNEGFLP-TNFTFP------FVLKACAREHDFQLGVRS----HS-LIVKAGLDC 63
+ NS + GF+ T F F +AC D G+++ HS +++ L
Sbjct: 10 QILNSNKFRGFVSLTRIRFDRLKVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRI 69
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D + L+ Y G + A +FD +KNVV + +I Y+N EA+++F+ +L
Sbjct: 70 DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
PD ++ VL AC+ L +L +H + + G N+F+ +LV +Y KCG +
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLR 189
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
+AR+V DQMP +D+VSW+SM+ GYA +G +AL++ M NL + TM A
Sbjct: 190 EARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTM-------A 242
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
SL V + +E +++ N +F M K+ + WN
Sbjct: 243 SLSP----VVCYTSLENVQYIHN----------------------MFERMTKKNLISWNV 276
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++ N A +F Q+E+CG++P+ T LL C + GR+ + +
Sbjct: 277 MIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEK-G 335
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+L P + ++D+ + G L+EA ++ M + + + W ++++
Sbjct: 336 NLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLR-DVVSWTSMMSA 381
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/598 (40%), Positives = 362/598 (60%), Gaps = 8/598 (1%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
F A+ Y M G P FTFPF LK+CA LG + H I K G + FV+T
Sbjct: 21 FLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTG 80
Query: 71 LLNLYVHCGYLADALKVFDD--IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
L+++Y + +A KVF++ K V + A++SGY++ +A+ +FR++ G+
Sbjct: 81 LISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVP 140
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
+S +++ ++ AC +L +H + G +V V + +Y KCG++ A+++
Sbjct: 141 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 200
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD+MP K ++SW++M+ GYA NG L+++ NM + P+ T+VGVLS+CA+LGA
Sbjct: 201 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 260
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+G M+ + F SNP L LI+MYA+CG + +A VF M ++ V W A++ G
Sbjct: 261 SVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGY 320
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
M+G+ ++A +F ++ + GI+P+G FV +L C+HAGL D+G ++F M R + L P
Sbjct: 321 GMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPG 380
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
EHY CMVDLLGR+G+L EA LI+SMP++P+ VWGALL C++HK +LAE ++I
Sbjct: 381 PEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVI 440
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
LEP N G YVLLSNIYS ++ +IR MM +K ++K GCS+VE+ G VH F+VGD
Sbjct: 441 ELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGD 500
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF--LACHSEKLALAFGL 546
+H S++IY L+EL + P D + EE K F + HSEKLA+AFGL
Sbjct: 501 RNHLQSDEIYRVLEELEAIIMQEFGKPEKD----NREESNKDGFTRVGVHSEKLAVAFGL 556
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ T + I KNLR+C DCH K++SKI R++ VRD RFH F GSCSCKD+W
Sbjct: 557 LNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 172/319 (53%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+VSN A+ + M EG + T ++ AC + +LG H +K G
Sbjct: 114 LVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG 173
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D V + +Y+ CG + A K+FD++P K ++SW A++SGY G + ++R
Sbjct: 174 FDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYR 233
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ PD ++V VL++C LG S + + +G N F+ +L+++YA+CG
Sbjct: 234 NMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCG 293
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ KA+ VFD MPE+ +VSW+++I GY +G + A+ +F M R ++P+ V VLS
Sbjct: 294 NLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLS 353
Query: 241 ACASLGALELGVWASSFMERN-EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQ 298
AC+ G + G+ M+RN + P + ++D+ + GR+ +A + M K D
Sbjct: 354 ACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDG 413
Query: 299 VVWNAVVSGLSMNGYVKVA 317
VW A++ ++ V++A
Sbjct: 414 AVWGALLGACKIHKNVELA 432
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/675 (38%), Positives = 372/675 (55%), Gaps = 76/675 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G F AI+ + M +G PT FT VL +CA +G + HS +VK G
Sbjct: 133 MVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLG 192
Query: 61 LDCDEFVKTSLLNLY-------------------------------VHCGYLADALKVFD 89
L V S+LN+Y H G + AL +F+
Sbjct: 193 LSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFE 252
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL-HRGLKPDSFSIVRVLTACTQLGDLS 148
++PD+ +VSW A+I+GY G +A+ F R+L + + PD F+I VL+AC LG +S
Sbjct: 253 NMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVS 312
Query: 149 TAKWIHGYV------------------------NEAGKG---------RNVFVATSLVDL 175
K +H Y+ E +G NV T+L++
Sbjct: 313 IGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEG 372
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y K G+M+ AR +FD M +D+V+W++MI GY NG EA+++F M R +P YT+
Sbjct: 373 YVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTV 432
Query: 236 VGVLSACASLGALELGVWA-----SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
VLS CASL LE G S E++ +SN +++ MYA+ G + A +VF
Sbjct: 433 AAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSN-----SIVTMYARSGSLPWARRVF 487
Query: 291 -REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
R K+ V W +++ L+ +G + A G+F ++ + G++P+ TFVG+L CTH G V
Sbjct: 488 DRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFV 547
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
DEG+++F + + P + HY CMVDLL R+G EA E I+ MP+EP+AI WG+LL+
Sbjct: 548 DEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLS 607
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKI 469
CR+HK DLAE +L++++P NSG Y LSN+YSA +WNDAAKI DK ++K
Sbjct: 608 ACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKE 667
Query: 470 RGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEK 529
G SW + VH F D HP + +Y ++ +K AGFVP VL D+++E K
Sbjct: 668 TGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELK 727
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+ L+ HSEKLA+AFGL++T K +RI KNLRVC DCH AIK ISK+ REII+RD R
Sbjct: 728 EEMLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATR 787
Query: 590 FHCFIEGSCSCKDFW 604
FH F +G CSCKD+W
Sbjct: 788 FHHFKDGFCSCKDYW 802
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 183/415 (44%), Gaps = 68/415 (16%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F SLL+LY G LADA VF ++P+++ VSWT ++ G G EAI MF ++
Sbjct: 97 FTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTD 156
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
GL P F++ VL++C + +H +V + G V VA S++++Y KCG+ E A
Sbjct: 157 GLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETA 216
Query: 186 RRVFDQMPEKD-------------------------------IVSWSSMIQGYASNGFPK 214
R VF++MPE+ IVSW+++I GY NG
Sbjct: 217 RAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNA 276
Query: 215 EALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMER----------NEF 263
+AL F M + P+ +T+ VLSACA+LG + +G +++ R N
Sbjct: 277 KALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNAL 336
Query: 264 LS-----------------------NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+S N + T L++ Y K G M A ++F M ++D V
Sbjct: 337 ISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVA 396
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ G NG+ A +F + + G +PN T +L C ++ G+Q
Sbjct: 397 WTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAI 456
Query: 361 RVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R SL +V + RSG L A + + + W +++ H
Sbjct: 457 R--SLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQH 509
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 133/281 (47%), Gaps = 36/281 (12%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
RNVF SL+ LYAK G + AR VF +MPE+D VSW+ M+ G G EA+ MF +M
Sbjct: 94 RNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDM 153
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC--- 280
+ L P +T+ VLS+CA+ A +G SF+ + S + ++++MY KC
Sbjct: 154 VTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDA 213
Query: 281 ----------------------------GRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
GRM A +F M D+ V WNAV++G + NG
Sbjct: 214 ETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNG 273
Query: 313 YVKVAFGVFGQ-LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI-E 370
A F + L + P+ T +L C + G+V G+Q + R S P I +
Sbjct: 274 LNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILR--SRMPYIGQ 331
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPM-EPNAIVWGALLAG 410
++ + +SG ++ A +++ M + N I + ALL G
Sbjct: 332 VTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEG 372
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/639 (39%), Positives = 372/639 (58%), Gaps = 35/639 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I ++ AI+ Y+S++ G P F KACA D H + G
Sbjct: 135 LISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCG 194
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L++ Y C + A +VFDD+ ++VVSWT++ S Y+ G + +++FR
Sbjct: 195 VMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFR 254
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+KP+ ++ +L AC +L DL + K IHG+ G N+FV ++LV LYAKC
Sbjct: 255 EMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCL 314
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGY--------------------------------- 207
++ +AR VFD MP +D+VSW+ ++ Y
Sbjct: 315 SVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIG 374
Query: 208 --ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
NG +EA++MF MQ+ KP T+ +L AC+ L +G ++ R+ +
Sbjct: 375 GCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVG 434
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ T L+ MYAKCG + + VF M+ KD V WN ++ +M+G K A +F ++
Sbjct: 435 DLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKML 494
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
+QPN TF G+L GC+H+ LV+EG Q FNSM R + P HY C+VD+ R+G+L
Sbjct: 495 LSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRL 554
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
+EA++ I+ MPMEP A WGALLA CR++K +LA+ +L +EP N GNYV L NI
Sbjct: 555 NEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNIL 614
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ W++A+++R +M ++GI K GCSW++V VH F+VGD S+ S+KIY+ LDEL
Sbjct: 615 VTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELV 674
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
K+K AG+ P TD+VL DI++EEK L HSEKLA+AFG++ + IR+ KNLR+CG
Sbjct: 675 EKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICG 734
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH AIK +SK+ G I+VRD+ RFH F G+CSCKD W
Sbjct: 735 DCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 149/292 (51%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ + ++ G A ++FD+IP + + + +IS G EAI ++ L RG+KPD
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ AC GD K +H G +VFV +L+ Y KC +E ARRVFD
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+ +D+VSW+S+ Y GFP++ +D+F M +KP T+ +L ACA L L+
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G F R+ + N + + L+ +YAKC + +A VF M +D V WN V++
Sbjct: 284 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 343
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
N + F +F ++ + G++ + T+ ++ GC G +E + F M ++
Sbjct: 344 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKM 395
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/598 (40%), Positives = 362/598 (60%), Gaps = 8/598 (1%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
F A+ Y M G P FTFPF LK+CA LG + H I K G + FV+T
Sbjct: 30 FLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTG 89
Query: 71 LLNLYVHCGYLADALKVFDD--IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
L+++Y + +A KVF++ K V + A++SGY++ EA+ +FR++ G+
Sbjct: 90 LISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVP 149
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
+S +++ ++ AC +L +H + G +V V + +Y KCG++ A+++
Sbjct: 150 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 209
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD+MP K ++SW++M+ GYA NG L+++ NM + P+ T+VGVLS+CA+LGA
Sbjct: 210 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 269
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+G ++ + F SNP L LI+MYA+CG + +A VF M ++ V W A++ G
Sbjct: 270 SVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGY 329
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
M+G+ ++A +F ++ + GI+P+G FV +L C+HAGL D+G ++F M R + L P
Sbjct: 330 GMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPG 389
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
EHY CMVDLLGR+G+L EA LI+SMP++P+ VWGALL C++HK +LAE ++I
Sbjct: 390 PEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVI 449
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
LEP N G YVLLSNIYS ++ +IR MM +K ++K GCS+VE+ G VH F+VGD
Sbjct: 450 ELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGD 509
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF--LACHSEKLALAFGL 546
+H S++IY L+EL + P D + EE K F + HSEKLA+AFGL
Sbjct: 510 RNHLQSDEIYRVLEELEAIIMQEFGKPEKD----NREESNKDGFTRVGVHSEKLAVAFGL 565
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ T + I KNLR+C DCH K++SKI R++ VRD RFH F GSCSCKD+W
Sbjct: 566 LNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 172/319 (53%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+VSN A+ + M EG + T ++ AC + +LG H +K G
Sbjct: 123 LVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG 182
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D V + +Y+ CG + A K+FD++P K ++SW A++SGY G + ++R
Sbjct: 183 FDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYR 242
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ PD ++V VL++C LG S + + +G N F+ +L+++YA+CG
Sbjct: 243 NMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCG 302
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ KA+ VFD MPE+ +VSW+++I GY +G + A+ +F M R ++P+ V VLS
Sbjct: 303 NLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLS 362
Query: 241 ACASLGALELGVWASSFMERN-EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQ 298
AC+ G + G+ M+RN + P + ++D+ + GR+ +A + M K D
Sbjct: 363 ACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDG 422
Query: 299 VVWNAVVSGLSMNGYVKVA 317
VW A++ ++ V++A
Sbjct: 423 AVWGALLGACKIHKNVELA 441
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/579 (42%), Positives = 353/579 (60%), Gaps = 15/579 (2%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADAL 85
FLPTN T R+ Q V G+ + V L+ Y + L DA
Sbjct: 746 FLPTNLT-------QVRQVHXQASVH--------GMLQNLIVANKLVXFYSYYRALDDAY 790
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+FD + ++ VSW+ ++ G+ G+ FR L+ G +PD++++ V+ AC L
Sbjct: 791 GLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLK 850
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
+L + IH V + G + FV +LVD+Y KC +E AR +FD+M E+D+V+W+ MI
Sbjct: 851 NLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIG 910
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GYA G E+L +F M+ E + P+ MV V+ ACA LGA+ +++R +F
Sbjct: 911 GYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL 970
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ +LGT +IDM+AKCG + A ++F M++K+ + W+A+++ +G + A +F +
Sbjct: 971 DVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML 1030
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
+ GI PN T V LL C+HAGLV+EG +FF+ M +S+ ++HY C+VDLLGR+G+L
Sbjct: 1031 RSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRL 1090
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
DEA +LI SM E + +WGA L CR HK LAE L+ L+P N G+Y+LLSNIY
Sbjct: 1091 DEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIY 1150
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ + +W D AKIR +M + ++KI G +W+EVD H+F VGD +HP S++IY L L
Sbjct: 1151 ANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLG 1210
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
KL+ G+VP T+ VL D++EE K L HSEKLA+AFGLI T IRI KNLRVCG
Sbjct: 1211 NKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCG 1270
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH KL+S ITGR IIVRD NRFH F EG+CSC D+W
Sbjct: 1271 DCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/496 (41%), Positives = 307/496 (61%)
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 126
V L+ Y + L DA +FD + ++ VSW+ ++ G+ G+ FR L+ G
Sbjct: 96 VANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCG 155
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
+PD++++ V+ AC L +L + IH V + G + FV +LVD+Y KC +E AR
Sbjct: 156 ARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDAR 215
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
+FD+M E+D+V+W+ MI GYA G E+L +F M+ E + P+ MV V+ ACA LG
Sbjct: 216 FLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLG 275
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
A+ +++R +F + +LGT +IDMYAKCG + A ++F M++K+ + W+A+++
Sbjct: 276 AMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIA 335
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
+G + A +F + G+ P+ T LL C+HAGLV+EG +FF+SM +S+
Sbjct: 336 AYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVR 395
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
++HY C+VDLLGR+G+LDEA +LIKSM +E + +WGA L CR HK LAE
Sbjct: 396 TDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATS 455
Query: 427 LIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLV 486
L+ L+ N G+YVLLSNIY+ + +W D AKIR +M + ++K G +W+EVD H+F V
Sbjct: 456 LLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSV 515
Query: 487 GDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGL 546
GD +HP S++IY L L+ KL+ G+VP T+ VL D++EE K L HSEKLA+AFGL
Sbjct: 516 GDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGL 575
Query: 547 ITTAPKDVIRIAKNLR 562
I T IRI KNLR
Sbjct: 576 IATPEHTPIRIIKNLR 591
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 177/305 (58%), Gaps = 2/305 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GF + + + + G P N+T PFV++AC + Q+G H ++ K G
Sbjct: 131 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 190
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D FV +L+++YV C + DA +FD + ++++V+WT +I GY G E++ +F
Sbjct: 191 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 250
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ PD ++V V+ AC +LG + A+ I Y+ +V + T+++D+YAKCG
Sbjct: 251 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 310
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E AR +FD+M EK+++SWS+MI Y +G ++ALD+F M + P+ T+ +L
Sbjct: 311 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLY 370
Query: 241 ACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G +E G+ + SS E ++ T ++D+ + GR+ +A K+ + M +KD+
Sbjct: 371 ACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDE 430
Query: 299 VVWNA 303
+W A
Sbjct: 431 GLWGA 435
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 181/319 (56%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GF + + + + G P N+T PFV++AC + Q+G H ++ K G
Sbjct: 807 MVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 866
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D FV +L+++Y C + DA +FD + ++++V+WT +I GY GN E++ +F
Sbjct: 867 LDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFD 926
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ PD ++V V+ AC +LG + A+ I Y+ +V + T+++D++AKCG
Sbjct: 927 KMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCG 986
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E AR +FD+M EK+++SWS+MI Y +G ++ALD+F M R + P T+V +L
Sbjct: 987 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 1046
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G +E G+ S M + + V T ++D+ + GR+ +A K+ M +KD+
Sbjct: 1047 ACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDE 1106
Query: 299 VVWNAVVSGLSMNGYVKVA 317
+W A + + V +A
Sbjct: 1107 GLWGAFLGACRTHKDVXLA 1125
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 157/348 (45%), Gaps = 20/348 (5%)
Query: 107 INEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNV 166
+N N EE + F L + L P + ++A +L+ + +H + G N+
Sbjct: 42 LNLHNREEESSKFHFL--QRLNPKFY-----ISALVNCRNLTQVRQVHAQASVHGMLENI 94
Query: 167 FVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE 226
VA L+ Y+ ++ A +FD M +D VSWS M+ G+A G F + R
Sbjct: 95 VVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRC 154
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+P+ YT+ V+ AC L L++G + + + + L+DMY KC + A
Sbjct: 155 GARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDA 214
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
+F +M+++D V W ++ G + G + +F ++ + G+ P+ V ++ C
Sbjct: 215 RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKL 274
Query: 347 GLVDEGRQFFNSMSR-VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
G + + R + + R F L ++ M+D+ + G ++ A E+ M E N I W
Sbjct: 275 GAMHKARIIDDYIQRKKFQLDVILG--TAMIDMYAKCGCVESAREIFDRME-EKNVISWS 331
Query: 406 ALLAGCRLH----KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
A++A H K DL +L+ + P L S +Y+ SH
Sbjct: 332 AMIAAYGYHGQGRKALDLFPMMLSS--GMLP---DKITLASLLYACSH 374
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/539 (44%), Positives = 343/539 (63%), Gaps = 5/539 (0%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F+ L+N+YV G L DA VFD +PD+NVVSWT +IS Y ++A+ +L
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G++P+ F+ VL AC L +L + +H + + G +VFV ++L+D+Y++ G +E A
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
RVFD+M D+V WSS+I G+A N EAL +F M+R + T+ VL AC L
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
LELG + + + + +L L+DMY KCG + A VF M +KD + W+ ++
Sbjct: 178 ALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMI 235
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
+GL+ NGY K A +F ++ GI+PN T VG+L C+HAGLV+EG +F+SM +F +
Sbjct: 236 AGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGI 295
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
P EHYGCM+DLLGR+G+L EA +LI M EP+A+ W ALL CR+H+ D+A H
Sbjct: 296 DPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAK 355
Query: 426 QLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFL 485
Q++ L+P ++G YVLLSNIY+ + +WND A++R M ++GI+K GCSW+EV +H F+
Sbjct: 356 QILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFI 415
Query: 486 VGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFG 545
+GD SHP +I +L++L KL G+VP T+ VL D+E E+ Q L HSEKLA+ FG
Sbjct: 416 LGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFG 475
Query: 546 LITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
L++ IRI KNLR+CGDCH KL++K+ R I++RD R+H F +G CSC DFW
Sbjct: 476 LMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 197/345 (57%), Gaps = 16/345 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS-HSLIVKA 59
MI + + A+EF M EG P FT+ VL+AC D +R H I+K
Sbjct: 37 MISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRAC----DGLFNLRQLHCCIIKI 92
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD D FV+++L+++Y G L +AL+VFD++ ++V W++II+G+ + +EA+ +F
Sbjct: 93 GLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLF 152
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+R+ G ++ VL ACT L L + +H +V + + ++ + +L+D+Y KC
Sbjct: 153 KRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYDQ--DLILNNALLDMYCKC 210
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++E A VF +M EKD++SWS+MI G A NG+ KEAL +F +M+ +KP Y T+VGVL
Sbjct: 211 GSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVL 270
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTT----LIDMYAKCGRMAQACKVFREMK- 294
AC+ G +E G++ M + F +P G +ID+ + GR+++A + EM+
Sbjct: 271 FACSHAGLVEEGLYYFHSM-KELFGIDP--GREHYGCMIDLLGRAGRLSEAVDLINEMEC 327
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
+ D V W A+++ ++ V VA Q+ + Q G T+V L
Sbjct: 328 EPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAG-TYVLL 371
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/606 (39%), Positives = 373/606 (61%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + N A++ + MR EG + T +L CA+ D H ++K G
Sbjct: 244 MISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHG 303
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + FV +L+N+Y G L DA KVF + ++VVSW +II+ Y + A F
Sbjct: 304 LEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFF 363
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-KGRNVFVATSLVDLYAKC 179
++ GL+PD ++V + + Q D ++ +HG++ G V + +++D+YAK
Sbjct: 364 KMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKL 423
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGV 238
G ++ A +VF+ +P KD+VSW+++I GY NG EA++++ M+ +K T V +
Sbjct: 424 GVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSI 483
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L+A A +GAL+ G+ + + + +GT LID+Y KCGR+ A +F ++ +
Sbjct: 484 LAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESS 543
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WNA++S ++G+ + A +F +++ G++P+ TF+ LL C+H+GLVDEG+ FF+
Sbjct: 544 VPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHL 603
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + + P ++HYGCMVDLLGR+G L+ A++ IK MP+ P+A +WGALL CR+H +
Sbjct: 604 MQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIE 662
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L + ++L ++ N G YVLLSNIY+ KW K+RS+ ++G++K G S +EV+
Sbjct: 663 LGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVN 722
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
V F G+ SHP ++IY++L L K+K+ G++P VL D+EE+EK++ L HSE
Sbjct: 723 RRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSE 782
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LA+AFG+I+T PK IRI KNLRVCGDCH A K IS+IT REI+VRD+ RFH F G C
Sbjct: 783 RLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGIC 842
Query: 599 SCKDFW 604
SC D+W
Sbjct: 843 SCGDYW 848
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 232/430 (53%), Gaps = 8/430 (1%)
Query: 1 MIRGFVSNDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI +V N F+ AI+ FY + F +TFP VLKAC D G + H + K
Sbjct: 145 MISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKL 201
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D FV SL+++Y G++ A +FDD+P +++ SW A+ISG I GN +A+++
Sbjct: 202 GFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 261
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ DS ++ +L C QLGD+STA IH YV + G +FV+ +L+++YAK
Sbjct: 262 DEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKF 321
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+ A++VF QM +D+VSW+S+I Y N P A F+ MQ L+P+ T+V +
Sbjct: 322 GNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLA 381
Query: 240 SACASLGALELGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
S A + F M R + V+G ++DMYAK G + A KVF + KD
Sbjct: 382 SIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDV 441
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WN ++SG + NG A V+ +E+C I+ N T+V +L H G + +G +
Sbjct: 442 VSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHG 501
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
+ + +L + C++DL G+ G+L +A L +P E +++ W A+++ +H
Sbjct: 502 HLIKT-NLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRE-SSVPWNAIISCHGIHGHG 559
Query: 418 DLAEHVLNQL 427
+ A + ++
Sbjct: 560 EKALKLFREM 569
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 208/422 (49%), Gaps = 27/422 (6%)
Query: 6 VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQ----------LGVRSHSL 55
VS FQ I+ S + G+ F + A E DF L R H+L
Sbjct: 39 VSPADFQRQIQMEQSSGDNGWFNGQIPFHWRQPAKNEEIDFNSLFDSCTKTLLAKRLHAL 98
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
+V +G F+ L+NLY G ++ + FD I K+V +W ++IS Y+ G+ EA
Sbjct: 99 LVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREA 158
Query: 116 INMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
I+ F +LL + D ++ VL AC L D + IH +V + G +VFVA SL+
Sbjct: 159 IDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVFVAASLIH 215
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+Y++ G + AR +FD MP +D+ SW++MI G NG +ALD+ M+ E + + T
Sbjct: 216 MYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVT 275
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+ +L CA LG + ++ ++ + LI+MYAK G + A KVF++M
Sbjct: 276 VASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMF 335
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+D V WN++++ N A G F +++ G++P+ T V L A + + R
Sbjct: 336 LRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSL------ASIAAQSRD 389
Query: 355 FFNSMS------RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
+ NS S R L + ++D+ + G +D AH++ +P++ + + W L+
Sbjct: 390 YKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVK-DVVSWNTLI 448
Query: 409 AG 410
+G
Sbjct: 449 SG 450
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 174/379 (45%), Gaps = 36/379 (9%)
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
AK +H + +GK ++ F++ LV+LYA G++ +R FDQ+ KD+ +W+SMI Y
Sbjct: 92 AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151
Query: 210 NGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASL-GALELGVWASSFMERNEFLSNP 267
NG +EA+D FY + + ++YT VL AC +L ++ W F +
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRKIHCWVFKL----GFQWDV 207
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ +LI MY++ G + A +F +M +D WNA++SGL NG A V ++
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 267
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH----YGCMVDLLGRSG 383
GI + T +L C G + ++ ++ + +E ++++ + G
Sbjct: 268 GINMDSVTVASILPVCAQLGDISTA-----TLIHLYVIKHGLEFELFVSNALINMYAKFG 322
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL--NQLIALEPWNSGNYVLL 441
L +A ++ + M + + + W +++A + A QL LEP + V L
Sbjct: 323 NLGDAQKVFQQMFLR-DVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEP-DLLTLVSL 380
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
++I + S + ++ + + +G W+ ++ VV V D +Y+KL
Sbjct: 381 ASIAAQSRDYKNSRSVHGFIMRRG--------WL-MEAVVIGNAVMD--------MYAKL 423
Query: 502 DELATKLKAAGFVPTTDHV 520
+ + K +P D V
Sbjct: 424 GVIDSAHKVFNLIPVKDVV 442
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/605 (41%), Positives = 369/605 (60%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + N C + ++ + MR G+ P NFT LK+C F++G H +K
Sbjct: 176 MVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVC 235
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D +V +LL LY G +A+A + F+++P +++ W+ +IS Y +EA+ +F
Sbjct: 236 YDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFC 295
Query: 121 RLLHRGLK-PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ + P++F+ VL AC L L+ IH V + G NVFV+ +L+D+YAKC
Sbjct: 296 RMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKC 355
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E + ++F EK+ V+W+++I GY G ++AL++F NM +++P T VL
Sbjct: 356 GEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVL 415
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A ASL ALE G S + + + V+ +LIDMYAKCGR+ A F +M +D+V
Sbjct: 416 RASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEV 475
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ G S++G A +F +++ +PN TFVG+L C++AGL+D+GR F SM
Sbjct: 476 SWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSM 535
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + + P IEHY CMV LLGRSGQ DEA +LI +P +P+ +VW ALL C +HK DL
Sbjct: 536 LQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDL 595
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ +++ +EP + +VLLSN+Y+ + +W++ A +R M K ++K G SWVE G
Sbjct: 596 GKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQG 655
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VVH F VGD SHP + I++ L+ L K + AG+VP VL D+E++EK+ L HSE+
Sbjct: 656 VVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSER 715
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LALAFGLI IRI KNLR+C DCH IKL+SKI REI++RD NRFH F +G CS
Sbjct: 716 LALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCS 775
Query: 600 CKDFW 604
C D+W
Sbjct: 776 CGDYW 780
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 236/474 (49%), Gaps = 13/474 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+ +GF + FQ A + EG+ F F +LK + H+ + K G
Sbjct: 75 LAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLG 134
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV T+L++ Y CG + A +VFD I K++VSWT +++ Y E+++ +F
Sbjct: 135 HQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFC 194
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G +P++F+I L +C L K +HG + R+++V +L++LY K G
Sbjct: 195 QMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSG 254
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVL 239
+ +A++ F++MP+ D++ WS MI YA + KEAL++F M++ + + P +T VL
Sbjct: 255 EIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVL 314
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACASL L LG S + + SN + L+D+YAKCG + + K+F +K++V
Sbjct: 315 QACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEV 374
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-S 358
WN ++ G G + A +F + IQP T+ +L ++ GRQ + +
Sbjct: 375 AWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLT 434
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ +++ ++ + ++D+ + G++D+A M + + + W AL+ G +H
Sbjct: 435 IKTMYNKDSVVAN--SLIDMYAKCGRIDDARLTFDKMDKQ-DEVSWNALICGYSIH---G 488
Query: 419 LAEHVLNQLIALEPWNSG-NYVLLSNIYSASHKW----NDAAKIRSMMGDKGIQ 467
L LN ++ NS N + + SA A +SM+ D GI+
Sbjct: 489 LGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIE 542
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 189/380 (49%), Gaps = 3/380 (0%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
++ +L+ R D G H I+K G D F + LLN YVH G+L DA K+FD++
Sbjct: 5 SYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEM 64
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
P N VS+ + G+ + A + RL G + + F +L + T
Sbjct: 65 PLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCL 124
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+H YV + G + FV T+L+D Y+ CGN++ AR+VFD + KD+VSW+ M+ YA N
Sbjct: 125 SVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENY 184
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
+++L +F M+ +P +T+ L +C L A ++G + + + +G
Sbjct: 185 CHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGI 244
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQ 330
L+++Y K G +A+A + F EM D + W+ ++S + + K A +F ++ + +
Sbjct: 245 ALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVV 304
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
PN TF +L C L++ G Q + + +V L + ++D+ + G+++ + +
Sbjct: 305 PNNFTFASVLQACASLVLLNLGNQIHSCVLKV-GLDSNVFVSNALMDVYAKCGEIENSVK 363
Query: 391 LIKSMPMEPNAIVWGALLAG 410
L E N + W ++ G
Sbjct: 364 LFTG-STEKNEVAWNTIIVG 382
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 129/280 (46%), Gaps = 2/280 (0%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
DS S +L + D + K +H ++ + G ++F L++ Y G +E A ++F
Sbjct: 2 DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D+MP + VS+ ++ QG++ + + A + + RE + + +L S+ +
Sbjct: 62 DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLAD 121
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
+ +++ + ++ +GT LID Y+ CG + A +VF + KD V W +V+ +
Sbjct: 122 TCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYA 181
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
N + + +F Q+ G +PN T L C G+ +V +
Sbjct: 182 ENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLY 241
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+++L +SG++ EA + + MP + + I W +++
Sbjct: 242 VGIA-LLELYTKSGEIAEAQQFFEEMPKD-DLIPWSLMIS 279
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/639 (39%), Positives = 372/639 (58%), Gaps = 35/639 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I ++ AI+ Y+S++ G P F KACA D H + G
Sbjct: 49 LISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCG 108
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L++ Y C + A +VFDD+ ++VVSWT++ S Y+ G + +++FR
Sbjct: 109 VMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFR 168
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+KP+ ++ +L AC +L DL + K IHG+ G N+FV ++LV LYAKC
Sbjct: 169 EMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCL 228
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGY--------------------------------- 207
++ +AR VFD MP +D+VSW+ ++ Y
Sbjct: 229 SVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIG 288
Query: 208 --ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
NG +EA++MF MQ+ KP T+ +L AC+ L +G ++ R+ +
Sbjct: 289 GCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVG 348
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ T L+ MYAKCG + + VF M+ KD V WN ++ +M+G K A +F ++
Sbjct: 349 DLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKML 408
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
+QPN TF G+L GC+H+ LV+EG Q FNSM R + P HY C+VD+ R+G+L
Sbjct: 409 LSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRL 468
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
+EA++ I+ MPMEP A WGALLA CR++K +LA+ +L +EP N GNYV L NI
Sbjct: 469 NEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNIL 528
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ W++A+++R +M ++GI K GCSW++V VH F+VGD S+ S+KIY+ LDEL
Sbjct: 529 VTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELV 588
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
K+K AG+ P TD+VL DI++EEK L HSEKLA+AFG++ + IR+ KNLR+CG
Sbjct: 589 EKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICG 648
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH AIK +SK+ G I+VRD+ RFH F G+CSCKD W
Sbjct: 649 DCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 149/292 (51%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ + ++ G A ++FD+IP + + + +IS G EAI ++ L RG+KPD
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ AC GD K +H G +VFV +L+ Y KC +E ARRVFD
Sbjct: 78 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+ +D+VSW+S+ Y GFP++ +D+F M +KP T+ +L ACA L L+
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G F R+ + N + + L+ +YAKC + +A VF M +D V WN V++
Sbjct: 198 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 257
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
N + F +F ++ + G++ + T+ ++ GC G +E + F M ++
Sbjct: 258 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKM 309
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/604 (39%), Positives = 362/604 (59%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N + A+E SM E P+ T VL A + +G H +++G
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + T+L+++Y CG L A ++FD + ++NVVSW ++I Y+ N +EA+ +F+
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L G+KP S++ L AC LGDL ++IH E G RNV V SL+ +Y KC
Sbjct: 327 KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK 386
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +F ++ + +VSW++MI G+A NG P +AL+ F M+ +KP+ +T V V++
Sbjct: 387 EVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A L W + R+ N + T L+DMYAKCG + A +F M ++
Sbjct: 447 AIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTT 506
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G +G+ K A +F +++K I+PNG TF+ ++ C+H+GLV+ G + F M
Sbjct: 507 WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK 566
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+S+ ++HYG MVDLLGR+G+L+EA + I MP++P V+GA+L C++HK + A
Sbjct: 567 ENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA 626
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L L P + G +VLL+NIY A+ W ++R M +G++K GCS VE+
Sbjct: 627 EKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNE 686
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F G +HP S+KIY+ L++L +K AG+VP T+ VL +E + K+ L+ HSEKL
Sbjct: 687 VHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKL 745
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A++FGL+ T I + KNLRVC DCH A K IS +TGREI+VRD RFH F G+CSC
Sbjct: 746 AISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSC 805
Query: 601 KDFW 604
D+W
Sbjct: 806 GDYW 809
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 217/421 (51%), Gaps = 16/421 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++GF A++F+ MR + P + F ++LK C E + ++G H L+VK+G
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D F T L N+Y C + +A KVFD +P++++VSW I++GY G A+ M +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ LKP +IV VL A + L +S K IHGY +G V ++T+LVD+YAKCG
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E AR++FD M E+++VSW+SMI Y N PKEA+ +F M E +KP +++G L
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LG LE G + N + +LI MY KC + A +F +++ + V
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS 405
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G + NG A F Q+ ++P+ T+V ++ + + +
Sbjct: 406 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 465
Query: 361 R------VFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
R VF T +++ Y C ++ R LI M E + W A++ G
Sbjct: 466 RSCLDKNVFVTTALVDMYAKCGAIMIAR---------LIFDMMSERHVTTWNAMIDGYGT 516
Query: 414 H 414
H
Sbjct: 517 H 517
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 195/356 (54%), Gaps = 2/356 (0%)
Query: 55 LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEE 114
L+ K GL + F +T L++L+ G + +A +VF+ I K V + ++ G+ +L++
Sbjct: 59 LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDK 118
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A+ F R+ + ++P ++ +L C +L K IHG + ++G ++F T L +
Sbjct: 119 ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+YAKC + +AR+VFD+MPE+D+VSW++++ GY+ NG + AL+M +M ENLKP + T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+V VL A ++L + +G + R+ F S + T L+DMYAKCG + A ++F M
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+++ V WN+++ N K A +F ++ G++P + +G L C G ++ GR
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR- 357
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F + +S L + ++ + + ++D A + + + W A++ G
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL-QSRTLVSWNAMILG 412
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/604 (38%), Positives = 354/604 (58%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G Q A E ++ MR +G P FT ++ D + G H I K G
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D V L+ +Y+ + D KVF+ + + ++VSW A++SG+ + +F
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L G KP+ F+ + VL +C+ L D K +H ++ + + FV T+LVD+YAK
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E A FD++ +DI SW+ +I GYA ++A+ F MQRE +KP YT+ LS
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C+ + LE G + + + +G+ L+D+Y KCG M A +F+ + +D V
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVS 422
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN ++SG S +G + A F + GI P+ TF+G+L C+ GLV+EG++ F+SMS
Sbjct: 423 WNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMS 482
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+++ + P IEHY CMVD+LGR+G+ +E I+ M + P +++W +L C+LH D
Sbjct: 483 KIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFG 542
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L +EP +Y+LLSNI+++ +W+D IR++M +GI+K GCSWVEVDG
Sbjct: 543 EKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQ 602
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL D SHP +IY+KLD+L L + G+VP T+ VL ++ +EK L HSE+L
Sbjct: 603 VHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERL 662
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
AL+F L++T IRI KNLR+C DCH+ +KLIS IT +EI+VRD RFH F G+CSC
Sbjct: 663 ALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSC 722
Query: 601 KDFW 604
+D W
Sbjct: 723 QDRW 726
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 213/407 (52%), Gaps = 14/407 (3%)
Query: 29 TNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVF 88
+ FT VLK CA + G H+L +++G + DEF+ SL+++Y CG + DALKVF
Sbjct: 50 SKFTLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVF 109
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
I + +VV+W+A+I+G +G+ +EA +F + +G +P+ F++ +++ T +GDL
Sbjct: 110 TKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLR 169
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+ IHG + + G + V+ L+ +Y K +E +VF+ M D+VSW++++ G+
Sbjct: 170 YGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFY 229
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+ +FY M E KP +T + VL +C+SL E G + + +N +
Sbjct: 230 DSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDF 289
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+GT L+DMYAK + A F + ++D W ++SG + + A F Q+++ G
Sbjct: 290 VGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREG 349
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG------CMVDLLGRS 382
I+PN T L GC+H ++ GRQ + ++ H+G +VDL G+
Sbjct: 350 IKPNEYTLASCLSGCSHMATLENGRQ-------LHAVAVKAGHFGDIFVGSALVDLYGKC 402
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
G ++ A + K + + + + W +++G H + + A +++
Sbjct: 403 GCMEHAEAIFKGL-ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLS 448
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 182/369 (49%), Gaps = 9/369 (2%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A ++F +P+KN VSW A+++GY G+ ++ + +F ++ K F++ VL C
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
G L K +H +G + F+ SLVD+Y+KCG + A +VF ++ D+V+WS+M
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I G G +EA ++F+ M+R+ +P +T+ ++S ++G L G + + F
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
S+ ++ LI MY K + KVF M + D V WNA++SG + +F Q
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-CMVDLLGRS 382
+ G +PN TF+ +L C+ + G+Q + + S + G +VD+ ++
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDD--DFVGTALVDMYAKA 301
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN--QLIALEPWNSGNYVL 440
L++A + + + W +++G + +TD AE + + + E Y L
Sbjct: 302 RCLEDAGVAFDRL-VNRDIFSWTVIISG---YAQTDQAEKAVKYFRQMQREGIKPNEYTL 357
Query: 441 LSNIYSASH 449
S + SH
Sbjct: 358 ASCLSGCSH 366
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 140/268 (52%), Gaps = 5/268 (1%)
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
ME A R+F MPEK+ VSW++++ GYA G K+ L +F M+ K +T+ VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
CA+ G+L G + R+ + LG +L+DMY+KCG + A KVF ++++ D V W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
+A+++GL G+ + A +F + + G +PN T L+ T+ G + G+ + +
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 362 V-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
F ++ + M+ + R +++ +++ ++M P+ + W ALL+G +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRC--VEDGNKVFEAMT-NPDLVSWNALLSGFYDSQTCGRG 237
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSAS 448
+ Q++ LE + + +S + S S
Sbjct: 238 PRIFYQML-LEGFKPNMFTFISVLRSCS 264
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 222/593 (37%), Positives = 358/593 (60%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ A E + MR+ G +P FT ++ A D G H+ + K G + D V +L
Sbjct: 413 REAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNAL 472
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+ +Y+ G + D +VF+ +++++SW A++SG+ + + + +F ++L G P+
Sbjct: 473 VTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNM 532
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++ + +L +C+ L D+ K +H + + N FV T+LVD+YAK +E A +F++
Sbjct: 533 YTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNR 592
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+ ++D+ +W+ ++ GYA +G ++A+ F MQRE +KP +T+ LS C+ + L+ G
Sbjct: 593 LIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 652
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
S + + + + L+DMYAKCG + A VF + +D V WN ++ G S +
Sbjct: 653 RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQH 712
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G A F + G P+ TF+G+L C+H GL++EG++ FNS+S+++ +TP IEH
Sbjct: 713 GQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEH 772
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
Y CMVD+LGR+G+ E I+ M + N ++W +L C++H + E +L LE
Sbjct: 773 YACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELE 832
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P NY+LLSN+++A W+D +R++M +G++K GCSWVEV+G VH FL D SH
Sbjct: 833 PEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSH 892
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P +I+ KL +L KL + G+ P TDHVL ++ + EKQ L HSE+LALAF L++T+
Sbjct: 893 PKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTST 952
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ IRI KNLR+CGDCH+ +K IS+IT +E++VRD N FH F GSCSC++FW
Sbjct: 953 RKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 215/414 (51%), Gaps = 2/414 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GF + + + M + FT VLK CA + + G HSL ++ G
Sbjct: 301 LLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIG 360
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ DEF+ L+++Y CG DALKVF I D +VVSW+AII+ +G EA +F+
Sbjct: 361 CELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFK 420
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ H G+ P+ F++ +++A T LGDL + IH V + G + V +LV +Y K G
Sbjct: 421 RMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIG 480
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ RVF+ +D++SW++++ G+ N L +F M E P YT + +L
Sbjct: 481 SVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILR 540
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+C+SL ++LG + + +N N +GT L+DMYAK + A +F + +D
Sbjct: 541 SCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFA 600
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +V+G + +G + A F Q+++ G++PN T L GC+ +D GRQ +SM+
Sbjct: 601 WTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ-LHSMA 659
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + +VD+ + G +++A E++ + + + W ++ G H
Sbjct: 660 IKAGQSGDMFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTIICGYSQH 712
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 215/414 (51%), Gaps = 5/414 (1%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+ CA + D G H ++K+G++ D + SL+N+Y CG A KVF +IP+++
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
VVSWTA+I+G++ EG A+N+F + G++ + F+ L AC+ DL K +H
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ G ++FV ++LVDLYAKCG M A RVF MP+++ VSW++++ G+A G ++
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
L++F M + +T+ VL CA+ G L G S R + + L+D
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MY+KCG A KVF ++D D V W+A+++ L G + A VF ++ G+ PN T
Sbjct: 374 MYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
L+ T G + G + + F + +V + + G + + + ++
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTV--CNALVTMYMKIGSVQDGCRVFEA 491
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
+ I W ALL+G ++ D + NQ++A E +N Y +S + S S
Sbjct: 492 T-TNRDLISWNALLSGFHDNETCDTGLRIFNQMLA-EGFNPNMYTFISILRSCS 543
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 207/410 (50%), Gaps = 2/410 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GFV+ A+ + MR EG FT+ LKAC+ D + G + H+ +K G
Sbjct: 200 LITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVG 259
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV ++L++LY CG + A +VF +P +N VSW A+++G+ G+ E+ +N+F
Sbjct: 260 DFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFC 319
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ + F++ VL C G+L + +H G + F++ LVD+Y+KCG
Sbjct: 320 RMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCG 379
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
A +VF ++ + D+VSWS++I G +EA ++F M+ + P +T+ ++S
Sbjct: 380 LAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVS 439
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A LG L G + + + F + + L+ MY K G + C+VF ++D +
Sbjct: 440 AATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLIS 499
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++SG N +F Q+ G PN TF+ +L C+ VD G+Q +
Sbjct: 500 WNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIV 559
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ SL +VD+ ++ L++A + + ++ + W ++AG
Sbjct: 560 KN-SLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAG 607
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 190/341 (55%), Gaps = 20/341 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GF N+ + +N M EGF P +TF +L++C+ D LG + H+ IVK
Sbjct: 503 LLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNS 562
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD ++FV T+L+++Y +L DA +F+ + +++ +WT I++GY +G E+A+ F
Sbjct: 563 LDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFI 622
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+KP+ F++ L+ C+++ L + + +H +AG+ ++FVA++LVD+YAKCG
Sbjct: 623 QMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCG 682
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E A VFD + +D VSW+++I GY+ +G +AL F M E P+ T +GVLS
Sbjct: 683 CVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLS 742
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTT--------LIDMYAKCGRMAQACKVFR 291
AC+ +G +E G + F S + + G T ++D+ + G+ +
Sbjct: 743 ACSHMGLIEEG--------KKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIE 794
Query: 292 EMKDKDQV-VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
EMK V +W V+ M+G ++ FG ++ ++P
Sbjct: 795 EMKLTSNVLIWETVLGACKMHGNIE--FGERAAMKLFELEP 833
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/569 (40%), Positives = 351/569 (61%), Gaps = 1/569 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
++ ACAR H+ + + F+ SL++LY CG +ADA +VFD +P ++
Sbjct: 70 LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+ SWT++I+GY +EA+ + +L KP+ F+ +L A + IH
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ +V+V ++L+D+YA+CG M+ A VFDQ+ K+ VSW+++I G+A G +
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
L MF MQR + ++T V SA A +GALE G W + M ++ + +G T++D
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MYAK G M A KVF + KD V WN++++ + G + A F ++ KCG+ N T
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 369
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
F+ +L C+H GLV EG+Q+F+ M + ++L P I+HY +VDLLGR+G L++A I M
Sbjct: 370 FLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKM 428
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
PM+P A VWGALL CR+HK + + + + L+P ++G VLL NIY+++ +W+ AA
Sbjct: 429 PMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAA 488
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
++R MM G++K CSWVE++ VH F+ D++HP SE+IY K +E++ +++ AG+VP
Sbjct: 489 RVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVP 548
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
TD+VL ++E+E+Q L HSEK+ALAF LI IRI KN+R+CGDCH A + IS
Sbjct: 549 NTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYIS 608
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K+ REI+VRD NRFH F GSCSC D+W
Sbjct: 609 KVFKREIVVRDTNRFHHFSSGSCSCGDYW 637
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 164/317 (51%), Gaps = 1/317 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ ND A+ M F P FTF +LKA +G + H+L VK
Sbjct: 136 LIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYD 195
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++LL++Y CG + A+ VFD + KN VSW A+I+G+ +G+ E + MF
Sbjct: 196 WHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFA 255
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G + F+ V +A +G L KW+H ++ ++G+ + FV +++D+YAK G
Sbjct: 256 EMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSG 315
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M AR+VFD++ +KD+V+W+SM+ +A G +EA+ F M++ + T + +L+
Sbjct: 316 SMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILT 375
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK-VFREMKDKDQV 299
AC+ G ++ G M+ T++D+ + G + A +F+
Sbjct: 376 ACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAA 435
Query: 300 VWNAVVSGLSMNGYVKV 316
VW A++ M+ K+
Sbjct: 436 VWGALLGSCRMHKNAKI 452
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/604 (39%), Positives = 371/604 (61%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + A+ Y+ M +EG P + T+ VLKAC R D + G + V G
Sbjct: 76 MIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQG 135
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV ++LNLY CG + +A++VFD + +++V WT +I+G G EA++++R
Sbjct: 136 YGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYR 195
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + ++ D ++ ++ ACT LG IHGY+ +V V TSLVD+YAK G
Sbjct: 196 QMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNG 255
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A VF +M K+++SWS++I G+A NGF AL + +MQ KP+ ++V VL
Sbjct: 256 HLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLL 315
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+ +G L+LG ++ R + V T +IDMY+KCG ++ A VF ++ +D +
Sbjct: 316 ACSQVGFLKLGKSVHGYIVRRLHF-DCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSIS 374
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+++ ++G + A +F Q+ + ++P+ TF LL +H+GLV++GR +F+ M
Sbjct: 375 WNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMV 434
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P +HY CMVDLL R+G+++EA ELI+SM EP +W ALL+GC H K +
Sbjct: 435 NEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIG 494
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +++ L P + G Y L+SN ++ + +W++ A++R +M G++K+ G S +EV+G
Sbjct: 495 EMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGK 554
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H FL+ D SH E+I L +L ++KA G+VP T+ VL ++EEE K+ L HSE+L
Sbjct: 555 LHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERL 614
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL+ T P + I KNLRVCGDCHEA K ISKI REI+VRD RFH F +G CSC
Sbjct: 615 AIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSC 674
Query: 601 KDFW 604
D+W
Sbjct: 675 GDYW 678
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 206/380 (54%), Gaps = 13/380 (3%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+L++ G+ L+ Y G++ A +VFD P V +W A+I Y G +
Sbjct: 27 HALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAM 86
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
EA++++ R+ G++PDS + VL ACT+ DL + + + G G +VFV ++
Sbjct: 87 FEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAV 146
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
++LYAKCG M++A RVFD+M +D+V W++MI G A NG +EA+D++ M ++ ++ +
Sbjct: 147 LNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDG 206
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
M+G++ AC +LG ++G+ +M R + + + ++ T+L+DMYAK G + A VFR
Sbjct: 207 VVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRR 266
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M K+ + W+A++SG + NG+ A + ++ G +P+ + V +L C+ G + G
Sbjct: 267 MLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLG 326
Query: 353 RQFFNSMSRVFSLTPMIEHYGC-----MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+ + R H+ C ++D+ + G L A + + ++I W A+
Sbjct: 327 KSVHGYIVRRL-------HFDCVSSTAVIDMYSKCGSLSFARTVFDQISFR-DSISWNAI 378
Query: 408 LAGCRLHKKTDLAEHVLNQL 427
+A +H + A + Q+
Sbjct: 379 IASYGIHGSGEEALSLFLQM 398
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/583 (40%), Positives = 355/583 (60%), Gaps = 31/583 (5%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ +++A D F + L+++ ++ L A +VF I + N+ + + I G+ +
Sbjct: 35 HAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDP 94
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
+++ + + + GL PD+ + ++ ACTQ G L HG + G +V+V SL
Sbjct: 95 DKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSL 154
Query: 173 VDLYA-------------------------------KCGNMEKARRVFDQMPEKDIVSWS 201
V +Y+ K G++ AR++FD+MPEK++V+WS
Sbjct: 155 VTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWS 214
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
MI GYA N F +A+++++ +Q E + MV V+++CA LGALELG A ++ RN
Sbjct: 215 VMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRN 274
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ N +LGT L+DMYA+CG + +A VF ++ +D + W +++G +M+GY + A F
Sbjct: 275 KMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYF 334
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++EK G+ P TF +L C+H GLV+ G + F SM R + + P +EHYGCMVDLLGR
Sbjct: 335 SRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGR 394
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+G+L EA + + MPM+PNA +WGALL CR+HK +++AE LI L+P +SG YVLL
Sbjct: 395 AGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLL 454
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
SNIY+ ++KW + IR MM ++G+ K G + E+DG VH+F +GD +HP ++I
Sbjct: 455 SNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMW 514
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+E+ K++ AG+ D LFDI+EEEK+ + HSEKLA+A+ ++ T D IRI KNL
Sbjct: 515 EEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNL 574
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
RVC DCH A KLISK+ RE+IVRD NRFH F G+CSC D+W
Sbjct: 575 RVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 185/350 (52%), Gaps = 35/350 (10%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
IRGF + + FY + G +P N T+PF++KAC ++ +G+++H I++ G
Sbjct: 85 IRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGF 144
Query: 62 DCDEFVKTSLLNLY-------------------------------VHCGYLADALKVFDD 90
D D +V+ SL+ +Y + G + A K+FD
Sbjct: 145 DSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDK 204
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+P+KN+V+W+ +ISGY ++AI ++ L G+ + +V V+ +C LG L
Sbjct: 205 MPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELG 264
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ H Y+ N+ + T+LVD+YA+CG+++KA VFDQ+P +D +SW+++I G+A +
Sbjct: 265 ERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMH 324
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G+ ++AL+ F M++ L P T VLSAC+ G +E G+ M+R ++ P L
Sbjct: 325 GYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKR-DYRIEPRLE 383
Query: 271 TT--LIDMYAKCGRMAQACKVFREMKDKDQV-VWNAVVSGLSMNGYVKVA 317
++D+ + G++A+A K EM K +W A++ ++ ++A
Sbjct: 384 HYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIA 433
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 142/308 (46%), Gaps = 36/308 (11%)
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI 197
L +CT L L K IH ++ A +VF A+ L+ + ++ A +VF Q+ ++
Sbjct: 22 LESCTTLSHL---KIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNL 78
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF 257
++S I+G++ + P ++ + +R L P+ T ++ AC G+L++G+ A
Sbjct: 79 FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQ 138
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR-------------------------- 291
+ R+ F S+ + +L+ MY+ G + A VFR
Sbjct: 139 IIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSA 198
Query: 292 -----EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
+M +K+ V W+ ++SG + N + A ++ L+ G+ N V ++ C H
Sbjct: 199 RKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHL 258
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
G ++ G + + + R +T + +VD+ R G +D+A + +P +A+ W
Sbjct: 259 GALELGERAHDYILRN-KMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGR-DALSWTT 316
Query: 407 LLAGCRLH 414
L+AG +H
Sbjct: 317 LIAGFAMH 324
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 146/331 (44%), Gaps = 36/331 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N F AIE Y +++EG V+ +CA +LG R+H I++
Sbjct: 216 MISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNK 275
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + + T+L+++Y CG + A+ VFD +P ++ +SWT +I+G+ G E+A+ F
Sbjct: 276 MTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFS 335
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG------KGRNVFVATSL-- 172
R+ GL P + VL+AC+ HG + E G R+ + L
Sbjct: 336 RMEKAGLTPREITFTAVLSACS-----------HGGLVERGLELFESMKRDYRIEPRLEH 384
Query: 173 ----VDLYAKCGNMEKARRVFDQMPEK-DIVSWSSMIQG---YASNGFPKEALDMFYNMQ 224
VDL + G + +A + ++MP K + W +++ + ++ + A
Sbjct: 385 YGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLI--- 441
Query: 225 RENLKPEYYTMVGVLSAC-ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
LKPE+ +LS A E M+ + P G TL +M K +
Sbjct: 442 --ELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPP--GYTLFEMDGKVHKF 497
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
K E++ ++ +W ++ + + GY
Sbjct: 498 TIGDKTHPEIQQIER-MWEEILGKIRLAGYT 527
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/583 (41%), Positives = 356/583 (61%), Gaps = 35/583 (6%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ +++ GL + + L Y G L ++ VF+ + NV S++AII ++
Sbjct: 67 HASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLF 126
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
+ A + ++L G++P++F+ VL +C+ L + K +H + G G +++V T L
Sbjct: 127 DRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGL 182
Query: 173 VDLYAKCGNMEKARRVFDQMPEK-------------------------------DIVSWS 201
VD+YA+ G++ AR++FD+MPE+ D+V W+
Sbjct: 183 VDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWN 242
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
MI GYA +G P E+L +F M P T++ VLSAC LGALE G W S++E
Sbjct: 243 VMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENK 302
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
N +GT LIDMY+KCG + A VF ++DKD V WN+++ G +M+G+ + A +F
Sbjct: 303 GIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLF 362
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ + G +P TF+G+L C H GLV+EGR FF M + + P IEHYGCMV+LLGR
Sbjct: 363 EEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGR 422
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+G L+EA+ L+K+M + + ++WG LL CRLH L E + L+ + NSG YVLL
Sbjct: 423 AGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLL 482
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
SN+Y+A+ W AK+R++M + GI+K GCS +EVD VHEF+ G+ HP S++IY L
Sbjct: 483 SNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVML 542
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+E+ + LKA G+ P TD VL D+ EE+K+ L HSEKLA+AFGLI+T P ++I KNL
Sbjct: 543 NEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNL 602
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
RVC DCH +K+IS+ITGR+I++RD NRFH F +G CSC D+W
Sbjct: 603 RVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 177/339 (52%), Gaps = 39/339 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I V + F A +Y+ M + G P FTF VLK+C+ E G H +K G
Sbjct: 116 IIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLES----GKVLHCQAIKLG 171
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS---------------------- 98
L D +V+T L+++Y G + A ++FD +P++++VS
Sbjct: 172 LGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFE 231
Query: 99 ---------WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
W +I GY G E++ +FRR+L P+ +++ VL+AC QLG L +
Sbjct: 232 GMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALES 291
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+WIH Y+ G NV V T+L+D+Y+KCG++E AR VFD++ +KD+V+W+SMI GYA
Sbjct: 292 GRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAM 351
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+GF + AL +F M KP T +G+LSAC G +E G M R+++ P +
Sbjct: 352 HGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLM-RDKYGIEPKI 410
Query: 270 G--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
++++ + G + +A + + M D V+W ++
Sbjct: 411 EHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL 449
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 128/300 (42%), Gaps = 32/300 (10%)
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IH + G N + L YA G ++ + VF+ E ++ S+S++I + +
Sbjct: 66 IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACA-------SLGALELGVWASSFME------ 259
A + M ++P +T VL +C+ A++LG+ + ++
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDV 185
Query: 260 ----------RNEFLSNP----VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
R F P V TT++ Y+K G + +A +F MK++D V WN ++
Sbjct: 186 YARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMI 245
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
G + +G + +F ++ PN T + +L C G ++ GR + +S +
Sbjct: 246 GGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGR-WIHSYIENKGI 304
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
+ ++D+ + G L++A L+ + + + W +++ G +H ++H L
Sbjct: 305 QINVHVGTALIDMYSKCGSLEDA-RLVFDRIRDKDVVAWNSMIVGYAMH---GFSQHALQ 360
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/604 (40%), Positives = 354/604 (58%), Gaps = 34/604 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR +V+N + + + M N GF P N+T+P VLKAC+ + + G+ H ++K G
Sbjct: 90 MIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVG 149
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + FV L+ +Y CG L +A +VFD++ K+VVSW ++++GY + ++A+ + R
Sbjct: 150 LDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICR 209
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G KPD ++ ++ A
Sbjct: 210 EMEDYGQKPDGCTMASLMPAVAN---------------------------------TSSE 236
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ ++F + K+++SW+ MI+ Y N P +A+D++ M++ ++P+ T VL
Sbjct: 237 NVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLP 296
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC L AL LG ++E+ + N +L +LIDMYA+CG + A +VF MK +D
Sbjct: 297 ACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVAS 356
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++S M G A +F ++ G P+ FV +L C+H+GL+DEGR +F M+
Sbjct: 357 WTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMT 416
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ +TP IEHY C+VDLLGR+G++DEA+ +IK MP+EPN VW LL+ CR+ D+
Sbjct: 417 DDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIG 476
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ L+ L P SG YVLLSNIY+ + +W + +IRS+M K I+K G S VE++
Sbjct: 477 ILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQ 536
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL GD SHP S++IY +L L K+K G+VP TD L D+EEE+K+ LA HSEKL
Sbjct: 537 VHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKL 596
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+ F L+ T IRI KNLRVCGDCH A KLISKI REIIVRD NRFH F +G CSC
Sbjct: 597 AIVFALLNTQEYQ-IRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSC 655
Query: 601 KDFW 604
D+W
Sbjct: 656 GDYW 659
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/670 (38%), Positives = 377/670 (56%), Gaps = 66/670 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ F+ AI+ + M + LPT FT VL +CA +G + HS +VK G
Sbjct: 78 IIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLG 137
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L V SLLN+Y G L A VFD + +N SW A+IS ++N G ++ A+ F
Sbjct: 138 LHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFE 197
Query: 121 RLLHR--------------------------------GLKPDSFSIVRVLTACTQLGDLS 148
L R LKPD FS+ L+AC L LS
Sbjct: 198 LLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLS 257
Query: 149 TAKWIHGYV-----NEAGKGRNVFVA----------------------------TSLVDL 175
K IHGY+ + +G N ++ T+L++
Sbjct: 258 FGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNG 317
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y K G++ AR++F+ + + D+V+W++MI GY NG +A+++F M E +P +T+
Sbjct: 318 YVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTL 377
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK- 294
+LSA +S+ +L G + R+ +P +G L MYAK G + A KVF ++
Sbjct: 378 AAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQ 437
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
++D V W +++ L+ +G + A +F Q+ GI+P+ T+VG+L CTH GLV++GR
Sbjct: 438 NRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRS 497
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+F+ M V + P + HY CMVDL GR+G L EA++ +++MPMEP+ I WG+LL+ C+++
Sbjct: 498 YFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVY 557
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K DLA+ +L+ +EP NSG Y L+N+YS+ KW+DAAKIR +M +G++K +G SW
Sbjct: 558 KNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSW 617
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
V++ H F V D HP ++IY +D++ ++K GF P T+ VL D+E E K L
Sbjct: 618 VQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILR 677
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFG+I+T +RI KNLRVC DCH AIK ISK+ REIIVRD RFH F
Sbjct: 678 YHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFK 737
Query: 595 EGSCSCKDFW 604
+GSCSCKD+W
Sbjct: 738 DGSCSCKDYW 747
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 195/431 (45%), Gaps = 68/431 (15%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F ++L+ Y G L A +VFD IP ++ VSWT II GY G E+AI +F ++
Sbjct: 42 FSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKD 101
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
+ P F++ VL +C G K +H +V + G V VA SL+++YAK G+++ A
Sbjct: 102 KVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMA 161
Query: 186 RRVFDQM-------------------------------PEKDIVSWSSMIQGYASNGFPK 214
+ VFD+M E+DIVSW+SMI G +GF
Sbjct: 162 KVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDN 221
Query: 215 EALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
EAL F ++ ++ +LKP+ +++ LSACA+L L G ++ R F ++ +G L
Sbjct: 222 EALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNAL 281
Query: 274 IDMYAKC---------------------------------GRMAQACKVFREMKDKDQVV 300
I MYAK G + A ++F +KD D V
Sbjct: 282 ISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVA 341
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ G NG A VF + G +PN T +L + ++ G+Q S
Sbjct: 342 WTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAI 401
Query: 361 RVF-SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R +L+P + + + + ++G ++ A ++ + + + W +++ H +
Sbjct: 402 RSGEALSPSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEE 459
Query: 420 AEHVLNQLIAL 430
A + Q++ L
Sbjct: 460 AIELFEQMLTL 470
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 116/205 (56%), Gaps = 6/205 (2%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
+ F +++ YAK G +EKA +VFD +P +D VSW+++I GY G ++A+ +F +M
Sbjct: 39 KTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDM 98
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
++ + P +T+ VL++CA+ G+ +G SF+ + + + +L++MYAK G +
Sbjct: 99 VKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDL 158
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMN-GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
A VF MK ++ WNA++S L MN G V +A F L + I ++ ++ G
Sbjct: 159 KMAKVVFDRMKLRNTSSWNAMIS-LHMNCGRVDLALAQFELLSERDIV----SWNSMIAG 213
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTP 367
C G +E QFF+S+ + SL P
Sbjct: 214 CNQHGFDNEALQFFSSILKDTSLKP 238
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/593 (41%), Positives = 363/593 (61%), Gaps = 2/593 (0%)
Query: 14 AIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+E + M +G + P T VL A A D +G HS K GL E V T L+
Sbjct: 195 AVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLI 254
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
+LY CG + A +FD + ++V++ A+ISGY G + ++N+F L+ GL P+S
Sbjct: 255 SLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSS 314
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++V ++ + G A+ +HG+V ++G N V+T++ L+ + +ME AR+ FD M
Sbjct: 315 TLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTM 374
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
PEK + SW++MI GYA NG + A+ +F M + N++P T+ LSACA LGAL LG
Sbjct: 375 PEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGK 434
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
W + + N + T LIDMYAKCG +++A ++F M +K+ V WNA+++G ++G
Sbjct: 435 WLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHG 494
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
A ++ + + P TF+ +L C+H GLV+EG + F SM+ +++ P IEH
Sbjct: 495 QGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHC 554
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEP-NAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
CMVDLLGR+GQL EA ELI P VWGALL C +HK +DLA+ +L L+
Sbjct: 555 TCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELD 614
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P NSG YVLLSN++++ ++++AA +R + + K G + +E+ H F+ GD +H
Sbjct: 615 PENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAH 674
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P SE IYS L++L K+ AG+ P T+ L+D+EEEEK++ + HSEKLA+AFGL++T P
Sbjct: 675 PQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEP 734
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI KNLRVC DCH A K ISK+T R I+VRD +RFH F +G CSC D+W
Sbjct: 735 GTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 207/417 (49%), Gaps = 16/417 (3%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D FV ++L LY + A KVFD +P + V W +++G EA+ F R++
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSG----SEAVESFARMV 203
Query: 124 HRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
G ++PD+ ++ VL A ++ D++ + +H + + G + V T L+ LY+KCG++
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
E AR +FD M + D+V+++++I GY+ NG ++++F + L P T+V ++
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
+ G L F+ ++ F +N + T + ++ + M A K F M +K WN
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
A++SG + NG ++A +F Q+ K ++PN T L C G + G+ ++
Sbjct: 384 AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEE 443
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
L P + ++D+ + G + EA + +M + N + W A++AG LH + A
Sbjct: 444 -DLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNK-NVVSWNAMIAGYGLHGQGAEALK 501
Query: 423 VLNQLI--ALEPWNSGNYVLLSNIYSASHKW--NDAAKI-RSMMGDKGIQK-IRGCS 473
+ ++ L P ++ LS +Y+ SH + K+ RSM D I I C+
Sbjct: 502 LYKDMLDAHLLPTSA---TFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCT 555
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 152/321 (47%), Gaps = 36/321 (11%)
Query: 129 PDSFSIVRVLTACTQL-------GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
PDSFS T+ L S A+ +H AG + FVA++L LY
Sbjct: 105 PDSFSFAFAATSLAALCSRGGGAASSSAARALHALAVAAGYAADTFVASALAKLYFVLSR 164
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLS 240
++ AR+VFD +P D V W++++ G + + EA++ F M + +++P+ T+ VL
Sbjct: 165 VDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMVCDGSVRPDATTLASVLP 220
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A + + +G SF E+ + + T LI +Y+KCG + A +F M+ D V
Sbjct: 221 AAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVA 280
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG-----------LLCGCTHAGLV 349
+NA++SG S+NG V + +F +L G+ PN +T V LL C H ++
Sbjct: 281 YNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVL 340
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
G F + S V + + L R ++ A + +MP E W A+++
Sbjct: 341 KSG---FTANSPVST---------AITTLHCRLNDMESARKAFDTMP-EKTMESWNAMIS 387
Query: 410 GCRLHKKTDLAEHVLNQLIAL 430
G + T++A + Q++ L
Sbjct: 388 GYAQNGLTEMAVALFEQMVKL 408
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N + A+ + M P T L ACA+ LG H +I +
Sbjct: 385 MISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEED 444
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + +V T+L+++Y CG +++A ++F+ + +KNVVSW A+I+GY G EA+ +++
Sbjct: 445 LEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYK 504
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW--IHGYVNEAGKGRNVFVATSLVDLYAK 178
+L L P S + + VL AC+ G L W ++ + T +VDL +
Sbjct: 505 DMLDAHLLPTSATFLSVLYACSH-GGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGR 563
Query: 179 CGNMEKARRVFDQMPEKDIVS--WSSMIQG---YASNGFPKEALDMFYNMQRENLKPEYY 233
G +++A + + P+ + W +++ + + K A + + EN YY
Sbjct: 564 AGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPEN--SGYY 621
Query: 234 TMVGVL 239
++ L
Sbjct: 622 VLLSNL 627
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/605 (40%), Positives = 354/605 (58%), Gaps = 8/605 (1%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
+R F +I Y SM G P F+FPF+LK+CA G + H +++ G
Sbjct: 22 LRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGC 81
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV--VSWTAIISGYINEGNLEEAINMF 119
+ + FV T+L+++Y CG + DA KVF++ P + V + A+ISGY + +A MF
Sbjct: 82 EAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMF 141
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
RR+ G+ DS +I+ ++ CT L + +HG + G V V S + +Y KC
Sbjct: 142 RRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKC 201
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++E RR+FD+MP K +++W+++I GY+ NG + L++F M+ + P+ +T+V VL
Sbjct: 202 GSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVL 261
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
S+CA LGA ++G +E N F N L LI MYA+CG +A+A VF M K V
Sbjct: 262 SSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLV 321
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W A++ M+G + +F + K GI+P+G FV +L C+H+GL D+G + F +M
Sbjct: 322 SWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 381
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R + L P EHY C+VDLLGR+G+LDEA E I SMP+EP+ VWGALL C++HK D+
Sbjct: 382 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDM 441
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE ++I EP N G YVL+SNIYS S +IR MM ++ +K G S+VE G
Sbjct: 442 AELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG 501
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH FL GD SH +E+++ LDEL T + D EE HSE+
Sbjct: 502 KVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDR------GEEVSSTTREHSER 555
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFG++ + P I + KNLRVC DCH IKL+SKI R +VRD +RFH F +G CS
Sbjct: 556 LAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRFHYFKDGVCS 615
Query: 600 CKDFW 604
CKD+W
Sbjct: 616 CKDYW 620
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 167/326 (51%), Gaps = 2/326 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ +N A + M+ G + T ++ C LG H VK G
Sbjct: 124 LISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGG 183
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V S + +Y+ CG + ++FD++P K +++W A+ISGY G + + +F
Sbjct: 184 TYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFE 243
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ PD F++V VL++C LG + + V G NVF++ +L+ +YA+CG
Sbjct: 244 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCG 303
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ KAR VFD MP K +VSW++MI Y +G + L +F +M + ++P+ V VLS
Sbjct: 304 NLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLS 363
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G + G+ M+R L P + L+D+ + GR+ +A + M + D
Sbjct: 364 ACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDG 423
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQL 324
VW A++ ++ V +A F ++
Sbjct: 424 AVWGALLGACKIHKNVDMAELAFAKV 449
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 156/334 (46%), Gaps = 4/334 (1%)
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
SW + + E+I+++R +L G PD+FS +L +C L + + +H +
Sbjct: 16 TSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI--VSWSSMIQGYASNGFPK 214
V G FV T+L+ +Y KCG +E AR+VF++ P V ++++I GY +N
Sbjct: 76 VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
+A MF M+ + + T++G++ C L LG + S + + I
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
MY KCG + ++F EM K + WNAV+SG S NG +F Q++ G+ P+
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
T V +L C H G G++ + P + ++ + R G L +A +
Sbjct: 256 TLVSVLSSCAHLGAKKIGQE-VGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDI 314
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
MP++ + + W A++ +H + + + +I
Sbjct: 315 MPVK-SLVSWTAMIGCYGMHGMGETGLTLFDDMI 347
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/604 (40%), Positives = 363/604 (60%), Gaps = 31/604 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI+G+ ++ + Y M P FTFPF LK R+ Q G + VK G
Sbjct: 78 MIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKHG 137
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + FV+ + ++++ CG + A KVFD VV+W ++SGY N + + +
Sbjct: 138 FDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGY----NRVKQFKISK 193
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
LL VL+AC++L DL K I Y+N + ++A CG
Sbjct: 194 MLL-------------VLSACSKLKDLEWGKHIFKYIN----------GGIVEHMFAACG 230
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
M++A+ VFD M +D+VSW++MI GY AL +F MQ N+KP+ +TMV +L
Sbjct: 231 EMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILI 290
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LGALELG W + +++N ++ +G L+DMY KCG + +A KVF+EM KD+
Sbjct: 291 ACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFT 350
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++ GL++NG+ + A +F + + + P+ T++G+LC C +VD+G+ FF +M+
Sbjct: 351 WTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMT 406
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P + HYGCMVDLLG G L+EA E+I +MP++PN+IVWG+ L CR+HK LA
Sbjct: 407 MQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLA 466
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ Q++ LEP N YVLL NIY+AS KW + ++R +M ++GI+K GCS +E++G
Sbjct: 467 DMAAKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGN 526
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V+EF+ GD SHP S++IY+KL+ + L AG+ P T V D+ EE+K+ L HSEKL
Sbjct: 527 VYEFVAGDQSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKL 586
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+ LI++ P IRI KNLR+C DCH KL+S+ RE+IV+D RFH F GSCSC
Sbjct: 587 AIAYALISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFHHFRHGSCSC 646
Query: 601 KDFW 604
+FW
Sbjct: 647 NNFW 650
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 170/379 (44%), Gaps = 33/379 (8%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
HS +K GL D + ++ G + A +VFD IP ++ W +I GY
Sbjct: 27 HSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMFIWNTMIKGYSKIS 86
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+ E ++M+ +L +KPD F+ L T+ L K + + + G N+FV
Sbjct: 87 HPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKHGFDSNLFVQK 146
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+ + +++ CG ++ A +VFD ++V+W+ M+ GY + F
Sbjct: 147 AFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGY-------NRVKQF---------- 189
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ M+ VLSAC+ L LE G ++ G + M+A CG M +A VF
Sbjct: 190 KISKMLLVLSACSKLKDLEWGKHIFKYIN----------GGIVEHMFAACGEMDEAQGVF 239
Query: 291 REMKDKDQVVWNAVVSG-LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
MK +D V W A++ G L MN ++ A +F +++ ++P+ T V +L C G +
Sbjct: 240 DNMKTRDVVSWTAMIDGYLRMNHFIG-ALALFREMQMSNVKPDEFTMVSILIACALLGAL 298
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ G + + + +VD+ + G + +A ++ K M + + W ++
Sbjct: 299 ELGEWVKTCIDKNSNKNDSFVG-NALVDMYFKCGNVRKAKKVFKEM-YQKDKFTWTTMIV 356
Query: 410 GCRLHKKTDLAEHVLNQLI 428
G ++ + A + + +I
Sbjct: 357 GLAINGHGEEALAMFSNMI 375
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/608 (40%), Positives = 371/608 (61%), Gaps = 4/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G N A+ + M EG T VL C D L + H VK G
Sbjct: 140 MLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHG 199
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + FV +L+++Y G L +A VF + +++V+W +IISG G A+ MF+
Sbjct: 200 LDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQ 259
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-KGRNVFVATSLVDLYAKC 179
+ G+ PD ++V + +A Q GD +AK +H YV G ++ ++VD+YAK
Sbjct: 260 GMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKL 319
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGV 238
N+E A+R+FD MP +D VSW+++I GY NG EA++ + +MQ+ E LK T V V
Sbjct: 320 SNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSV 379
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L A + LGAL+ G+ + + + +GT LID+YAKCG++A+A +F +M +
Sbjct: 380 LPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRST 439
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WNA++SGL ++G+ A +F ++++ GI+P+ TFV LL C+HAGLVD+GR FF+
Sbjct: 440 GPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDV 499
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + + P+ +HY CM D+LGR+GQLDEA I++MP++P++ VWGALL CR+H +
Sbjct: 500 MQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVE 559
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
+ + L L+P N G YVL+SN+Y+ KW+ ++RS++ + +QK G S +EV
Sbjct: 560 MGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVK 619
Query: 479 GVVHEFLVGDNS--HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
V+ F G+ + HP E+I ++L L K+++ G+V VL D+E++EK++ L H
Sbjct: 620 RSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNH 679
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SE+LA+AFG+I T + + I KNLRVCGDCH A K IS+IT REIIVRD+NRFH F +G
Sbjct: 680 SERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDG 739
Query: 597 SCSCKDFW 604
CSC DFW
Sbjct: 740 HCSCGDFW 747
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 204/395 (51%), Gaps = 14/395 (3%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADA 84
F P FTFP +++A + H+ ++ GL F SL++ Y+ G +++A
Sbjct: 66 FRPDGFTFPSLIRAAPSNAS---AAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEA 122
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
KVFD++ +++V +W A++SG EA+ +F R++ G+ D+ ++ VL C L
Sbjct: 123 YKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLL 182
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
GD A +H Y + G + +FV +L+D+Y K G +E+A+ VF M +D+V+W+S+I
Sbjct: 183 GDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSII 242
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF----MER 260
G G AL MF M+ + P+ T+V + SA A G G A S M R
Sbjct: 243 SGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGD---GRSAKSLHCYVMRR 299
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ + + G ++DMYAK + A ++F M +D V WN +++G NG A
Sbjct: 300 GWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVER 359
Query: 321 FGQLEKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+G ++K G++ TFV +L +H G + +G + +++S L + C++DL
Sbjct: 360 YGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMR-MHALSIKIGLNVDVYVGTCLIDLY 418
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ G+L EA L + MP W A+++G +H
Sbjct: 419 AKCGKLAEAMLLFEKMPRRSTG-PWNAIISGLGVH 452
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/604 (39%), Positives = 358/604 (59%), Gaps = 2/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N + A++ M+ G P + T +L A A ++G H ++G
Sbjct: 217 LVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSG 276
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V +LL++Y CG A VF + K VVSW +I G G EEA F
Sbjct: 277 FESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFL 336
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L G P +++ VL AC LGDL ++H +++ NV V SL+ +Y+KC
Sbjct: 337 KMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCK 396
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +F+ + EK V+W++MI GYA NG KEAL++F MQ + +K + +T+VGV++
Sbjct: 397 RVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVIT 455
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A W R +N + T L+DMYAKCG + A K+F M+++ +
Sbjct: 456 ALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVIT 515
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G +G K +F +++K ++PN TF+ ++ C+H+G V+EG F SM
Sbjct: 516 WNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQ 575
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L P ++HY MVDLLGR+GQLD+A I+ MP++P V GA+L C++HK +L
Sbjct: 576 EDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELG 635
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L L+P G +VLL+NIY+++ W+ AK+R+ M DKG+ K GCSWVE+
Sbjct: 636 EKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNE 695
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H F G +HP S+KIY+ L+ L ++KAAG+VP D + D+EE+ K+ L+ HSE+L
Sbjct: 696 IHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERL 754
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL+ T+P + I KNLRVCGDCH+ K IS +TGREIIVRD RFH F GSCSC
Sbjct: 755 AIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSC 814
Query: 601 KDFW 604
D+W
Sbjct: 815 GDYW 818
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 137/451 (30%), Positives = 231/451 (51%), Gaps = 8/451 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++G+ N A+ F+ M + + +L+ C D + G H LI+ G
Sbjct: 116 MLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNG 175
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV T++++LY C + +A K+F+ + K++VSWT +++GY G+ + A+ +
Sbjct: 176 FESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVL 235
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G KPDS ++V +L A + L + IHGY +G V V +L+D+Y KCG
Sbjct: 236 QMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCG 295
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ AR VF M K +VSW++MI G A NG +EA F M E P TM+GVL
Sbjct: 296 SARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLL 355
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+LG LE G + +++ + SN + +LI MY+KC R+ A +F + +K V
Sbjct: 356 ACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVT 414
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G + NG VK A +F ++ GI+ + T VG++ V+ ++ + ++
Sbjct: 415 WNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFS-VNRQAKWIHGLA 473
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + +VD+ + G + A +L M E + I W A++ G H
Sbjct: 474 VRACMDNNVFVSTALVDMYAKCGAIKTARKLF-DMMQERHVITWNAMIDGYGTHGVGKET 532
Query: 421 EHVLNQLI--ALEPWNSGNYVLLSNIYSASH 449
+ N++ A++P + LS I + SH
Sbjct: 533 LDLFNEMQKGAVKP---NDITFLSVISACSH 560
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 181/356 (50%), Gaps = 3/356 (0%)
Query: 55 LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEE 114
I+K G + +T +++L+ G ++A +VF+ + K V + ++ GY +L +
Sbjct: 69 FIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGD 128
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A+ F R++ ++ +L C + DL + IHG + G N+FV T+++
Sbjct: 129 ALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMS 188
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
LYAKC ++ A ++F++M KD+VSW++++ GYA NG K AL + MQ KP+ T
Sbjct: 189 LYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVT 248
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+V +L A A + AL +G + R+ F S + L+DMY KCG A VF+ M+
Sbjct: 249 LVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMR 308
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
K V WN ++ G + NG + AF F ++ G P T +G+L C + G ++ G
Sbjct: 309 SKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERG-W 367
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F + + L + ++ + + ++D A + + +E + W A++ G
Sbjct: 368 FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNN--LEKTNVTWNAMILG 421
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 2/242 (0%)
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
T ++ L+ K G+ +A RVF+ + K V + M++GYA N +AL F M + ++
Sbjct: 83 TKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVR 142
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
+L C L+ G + N F SN + T ++ +YAKC ++ A K+
Sbjct: 143 LVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKM 202
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F M+ KD V W +V+G + NG+ K A + Q+++ G +P+ T V +L +
Sbjct: 203 FERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKAL 262
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
GR R ++ ++D+ + G A + K M + W ++
Sbjct: 263 RIGRSIHGYAFRS-GFESLVNVTNALLDMYFKCGSARIARLVFKGMR-SKTVVSWNTMID 320
Query: 410 GC 411
GC
Sbjct: 321 GC 322
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/557 (43%), Positives = 341/557 (61%), Gaps = 5/557 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS---WTAIISGYINE 109
H+ I+K G + V T + + + A+ + + D V ++ II Y
Sbjct: 27 HTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARVYDAFLFSTIIRAYAES 86
Query: 110 GNLEE-AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
+ AI + +L G+ P+ ++ VL AC L DL+ K +HG + + G ++FV
Sbjct: 87 SQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFV 146
Query: 169 ATSLVDLYAKC-GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
++V +Y C G ME AR++FD+MP+ D V+W++MI GYA G A+ +F MQ
Sbjct: 147 QNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAG 206
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+ P+ TMV VLSAC LGALELG W S++E+ L L L+DM+AKCG + +A
Sbjct: 207 VCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKAL 266
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+FR M + V W +V+ GL+M+G A +F +++ G+ P F+GLL C+H+G
Sbjct: 267 GLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSG 326
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
LV+ GRQ+F+ M+R F + P IEHYGCMVDLL R+G + EA E ++ MP+EPN I+W L
Sbjct: 327 LVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTL 386
Query: 408 LAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
++ CR+H + L E + QLI EP + NYVLLSNIY W +KIR MG KGIQ
Sbjct: 387 ISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQ 446
Query: 468 KIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEE 527
K+ G + +E+D +HEF+VGD SH +I ++E+ ++K AG+ PTT V DI+EE
Sbjct: 447 KVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTTEVFLDIDEE 506
Query: 528 EKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDN 587
+K+ L+ HSEKLA+AF L+ T P IRI KNLRVCGDCH A K ISKI REI++RD
Sbjct: 507 DKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIYNREIVMRDR 566
Query: 588 NRFHCFIEGSCSCKDFW 604
+RFH F +G CSC DFW
Sbjct: 567 SRFHHFRDGQCSCGDFW 583
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 189/329 (57%), Gaps = 6/329 (1%)
Query: 1 MIRGFVSNDCFQH-AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR + + +H AI +YN M G P + FPFVLKACA D LG H +VK
Sbjct: 79 IIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKF 138
Query: 60 GLDCDEFVKTSLLNLYVHC-GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
G D D FV+ +++++Y C G + A K+FD++P + V+WTA+I GY G A+ +
Sbjct: 139 GFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGL 198
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
FR++ G+ PD ++V VL+ACT LG L KWI Y+ + + V ++ +LVD++AK
Sbjct: 199 FRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAK 258
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG+++KA +F M ++ IVSW+S+I G A +G EA+ +F M+ + PE +G+
Sbjct: 259 CGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGL 318
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-D 295
LSAC+ G +E G S M R +F P + ++D+ ++ G + +A + M +
Sbjct: 319 LSACSHSGLVERGRQYFSEMTR-QFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIE 377
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ ++W ++S ++G +K+ + QL
Sbjct: 378 PNPIIWRTLISACRVHGELKLGESISKQL 406
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/605 (40%), Positives = 374/605 (61%), Gaps = 10/605 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+ ++ N AI + + + F+P +FT P VLK CAR Q G + H L++K G
Sbjct: 86 LIKCYIENQRSNDAIALFCKLLCD-FVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIG 144
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D+FV +SL+++Y CG + KVFD + DK+VVSW ++I GY G +E A+ MF
Sbjct: 145 FGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFE 204
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + DSFS ++ ++ G L A+ V + RN ++++ Y K G
Sbjct: 205 EMPEK----DSFSWTILIDGLSKSGKLEAAR----DVFDRMPIRNSVSWNAMINGYMKAG 256
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A+ +FDQMPE+ +V+W+SMI GY N +AL +F M RE++ P Y T++G +S
Sbjct: 257 DSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVS 316
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A + + +L G W S++ ++ F ++ VLGT LI+MY+KCG + A +VFR + K
Sbjct: 317 AASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGH 376
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +V+ GL M+G V+ +F ++ + G++P+ TF+G+L C+HAG ++ ++F M+
Sbjct: 377 WTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMT 436
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P IEHYGC++D+L R+G L+EA + I+ MP++ N ++W +LL+G R H +
Sbjct: 437 YDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMG 496
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E+ LI L P +G YV+LSN+Y+A+ W ++R MM KG++K GCS +E G
Sbjct: 497 EYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGS 556
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEE-EKQYFLACHSEK 539
+HEF+VGD SHP +E+IY KL E+ KL AG +P T VL +EE+ EK+ L HSE+
Sbjct: 557 IHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSER 616
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL+ IRI KNLR+C DCH KL+S I REII+RD +RFH F GSCS
Sbjct: 617 LAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCS 676
Query: 600 CKDFW 604
CKDFW
Sbjct: 677 CKDFW 681
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 199/423 (47%), Gaps = 49/423 (11%)
Query: 24 EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV--HCGYL 81
+ FLP N FP L+ C E + + H+L +K V + LL LY L
Sbjct: 11 QPFLPPNLHFP--LQNCGTEREAN---QLHALSIKTASLNHPSVSSRLLALYADPRINNL 65
Query: 82 ADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
A +FD I + +VSW +I YI +AI +F +LL PDSF++ VL C
Sbjct: 66 QYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLC-DFVPDSFTLPCVLKGC 124
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+LG L K IHG V + G G + FV +SLV +Y+KCG +E R+VFD+M +KD+VSW+
Sbjct: 125 ARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWN 184
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
S+I GYA G + AL+MF M + + ++ ++ + G LE A +R
Sbjct: 185 SLIDGYARCGEIELALEMFEEMPEK----DSFSWTILIDGLSKSGKLEA---ARDVFDRM 237
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ N V +I+ Y K G A ++F +M ++ V WN++++G N A +F
Sbjct: 238 P-IRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLF 296
Query: 322 GQLEKCGIQPNGNTFVGLLCGCT-----------HAGLVDEGRQF--------------- 355
+ + I PN T +G + + H+ +V G +
Sbjct: 297 EVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKC 356
Query: 356 --FNSMSRVFSLTP--MIEHYGCMVDLLGRSGQLDEAHELIKSM---PMEPNAIVWGALL 408
S RVF P + H+ ++ LG G +++ EL M ++P+AI + +L
Sbjct: 357 GSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVL 416
Query: 409 AGC 411
C
Sbjct: 417 NAC 419
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 176/375 (46%), Gaps = 34/375 (9%)
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA--KCGNMEKARRVFDQMPEKDIVSWSS 202
G A +H + + V++ L+ LYA + N++ A +FD + E +VSW+
Sbjct: 26 GTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNL 85
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
+I+ Y N +A+ +F + + P+ +T+ VL CA LGAL+ G + +
Sbjct: 86 LIKCYIENQRSNDAIALFCKLLCD-FVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIG 144
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
F + + ++L+ MY+KCG + KVF M+DKD V WN+++ G + G +++A +F
Sbjct: 145 FGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFE 204
Query: 323 QLEKCGIQPNGNTF--VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
++ P ++F L+ G + +G ++ R F+ M S++ + M++
Sbjct: 205 EM------PEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVS-----WNAMINGYM 253
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
++G + A EL MP E + + W +++ G +K+ A + + L S NY
Sbjct: 254 KAGDSNTAKELFDQMP-ERSLVTWNSMITGYERNKQFTKALKLFE--VMLREDISPNYTT 310
Query: 441 LSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSK 500
+ SA A+ + S+ + + S + DGV+ L+ ++YSK
Sbjct: 311 ILGAVSA------ASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLI---------EMYSK 355
Query: 501 LDELATKLKAAGFVP 515
+ + L+ +P
Sbjct: 356 CGSVKSALRVFRSIP 370
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/606 (40%), Positives = 356/606 (58%), Gaps = 22/606 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ +V + F A+ M+ G + ++ D + G H IV+
Sbjct: 160 MLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNV 219
Query: 61 LD--CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
D + + T+L+++Y G LA A ++FD + ++VVSWT +I+G I L+E
Sbjct: 220 GDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKN 279
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F R+L L P+ +++ ++T C +G L KW H Y+ G G ++ + T+L+D+Y K
Sbjct: 280 FNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGK 339
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG + AR +F+ + +KD+ WS +I YA + ++F M ++KP TMV +
Sbjct: 340 CGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSL 399
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
LS CA GAL+LG W +++ R+ + +L T LI+MYAKCG + A +F E +D
Sbjct: 400 LSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDI 459
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+WN +++G SM+G K A +F ++E G++PN TFV + C+H+GL
Sbjct: 460 RMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL---------- 509
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+EHYGC+VDLLGR+G LDEAH +I++MPM PN I+WGALLA C+LHK
Sbjct: 510 ----------MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLA 559
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E +++ L+P N G VL SNIY+++ +WND +R M G++K G SW+EV
Sbjct: 560 LGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVS 619
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
G VH F GD + + K+Y + E+ KL+ +G+ P T VL +I+EEEK+ L+ HSE
Sbjct: 620 GSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSE 679
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA AFGLI+TAP IRI KNLR+C DCH A KL+SKI GR IIVRD NRFH F EG C
Sbjct: 680 KLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYC 739
Query: 599 SCKDFW 604
SC +W
Sbjct: 740 SCMGYW 745
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 213/417 (51%), Gaps = 5/417 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMR-NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I + +N Q + Y MR N+ NF P +LKACA+ LG H K
Sbjct: 58 LISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKN 117
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D FV +L+N+Y CG L A VFD +P+++VVSWT ++ Y+ EA+ +
Sbjct: 118 GFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLV 177
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV--NEAGKGRNVFVATSLVDLYA 177
R + G+K +++ ++ L D+ + + +HGY+ N + V + T+L+D+Y
Sbjct: 178 REMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYC 237
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
K G + A+R+FD++ ++ +VSW+ MI G + E F M E L P T++
Sbjct: 238 KGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLS 297
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+++ C +G L+LG W +++ RN F + L T LIDMY KCG++ A +F +K KD
Sbjct: 298 LITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKD 357
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+W+ ++S + + F +F ++ ++PN T V LL C AG +D G+
Sbjct: 358 VKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHA 417
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++R L + ++++ + G + A L M+ + +W ++AG +H
Sbjct: 418 YINR-HGLEVDVILETALINMYAKCGDVTIARSLFNE-AMQRDIRMWNTMMAGFSMH 472
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/603 (40%), Positives = 369/603 (61%), Gaps = 4/603 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF N A+ N M+ EG T +L CA+ D GV H ++K G
Sbjct: 193 MISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG 252
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D FV +L+N+Y G L DA VFD + +++VSW +II+ Y + A+ F+
Sbjct: 253 LDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFK 312
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV-NEAGKGRNVFVATSLVDLYAKC 179
+ G++PD ++V + + +QL D ++ I G+V ++V + +LV++YAK
Sbjct: 313 GMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKL 372
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVG 237
G M A VFDQ+P KD +SW++++ GY NG EA+D YNM E + P T V
Sbjct: 373 GYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDA-YNMMEECRDTIPNQGTWVS 431
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
++ A + +GAL+ G+ + + +N + + T LID+Y KCGR+ A +F E+
Sbjct: 432 IIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDT 491
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WNA+++ L ++G + A +F + ++ + TFV LL C+H+GLVDEG++ F+
Sbjct: 492 SVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFD 551
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
M + + + P ++HYGCMVDLLGR+G L++A+EL+++MP++P+A +WGALL+ C+++
Sbjct: 552 IMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNA 611
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
+L ++L+ ++ N G YVLLSNIY+ + KW K+RS+ D+G++K G S V V
Sbjct: 612 ELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVV 671
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
F G+ +HP +IY +L L+ K+K+ G+VP V DIEE+EK+ L HS
Sbjct: 672 GSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHS 731
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
E+LA+AFG+I+T P+ IRI KNLRVCGDCH A K IS+I+ REI+VRD+NRFH F +G
Sbjct: 732 ERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGI 791
Query: 598 CSC 600
CSC
Sbjct: 792 CSC 794
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/455 (32%), Positives = 241/455 (52%), Gaps = 12/455 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYN---SMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLI 56
+I +V + A+ N SM G L P +TFP +LKAC D G + H +
Sbjct: 91 IISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCV 147
Query: 57 VKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
K G + D FV SL++LY G L A KVF D+P K+V SW A+ISG+ GN A+
Sbjct: 148 FKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGAL 207
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+ R+ G+K D+ ++ +L C Q D+ IH +V + G +VFV+ +L+++Y
Sbjct: 208 GVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMY 267
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+K G ++ A+ VFDQM +D+VSW+S+I Y N P AL F MQ ++P+ T+V
Sbjct: 268 SKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVV 327
Query: 237 GVLSACASLGALELGVWASSFMERNEFL-SNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+ S + L + F+ R E+L + V+G L++MYAK G M A VF ++
Sbjct: 328 SLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPR 387
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
KD + WN +V+G + NG A + +E+C PN T+V ++ +H G + +G +
Sbjct: 388 KDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMK 447
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + SL + C++DL G+ G+L++A L +P + ++ W A++A +H
Sbjct: 448 IHAKLIK-NSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRD-TSVPWNAIIASLGIH 505
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+ + A + ++A E + + +S + + SH
Sbjct: 506 GRGEEALQLFKDMLA-ERVKADHITFVSLLSACSH 539
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 199/418 (47%), Gaps = 16/418 (3%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+L++ G + + T L+NLYV G ++ + FD I KN+ SW +IIS Y+ G
Sbjct: 42 HALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKY 101
Query: 113 EEAINMFRRLLHR----GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
EA+N +L L+PD ++ +L AC L D K +H V + G +VFV
Sbjct: 102 HEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFV 158
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
A SLV LY++ G ++ A +VF MP KD+ SW++MI G+ NG AL + M+ E +
Sbjct: 159 AASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGV 218
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
K + T+ +L CA + GV + ++ S+ + LI+MY+K GR+ A
Sbjct: 219 KMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQM 278
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF +M+ +D V WN++++ N A F ++ GI+P+ T V L +
Sbjct: 279 VFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSD 338
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
R + R L + +V++ + G ++ AH + +P + + I W L+
Sbjct: 339 QRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLV 397
Query: 409 AGCRLHKKTDLAEHVLNQLIALEPW-----NSGNYVLLSNIYSASHKWNDAAKIRSMM 461
G + + LA ++ +E N G +V + YS KI + +
Sbjct: 398 TG---YTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKL 452
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 155/323 (47%), Gaps = 15/323 (4%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
+++ K +H + GK +N+ ++T L++LY G++ +R FD + +K+I SW+S+I
Sbjct: 34 NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIIS 93
Query: 206 GYASNGFPKEALD----MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
Y G EA++ +F +L+P++YT +L AC SL G + +
Sbjct: 94 AYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKM 150
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
F + + +L+ +Y++ G + A KVF +M KD WNA++SG NG A GV
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
+++ G++ + T +L C + V G + + L + ++++ +
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK-HGLDSDVFVSNALINMYSK 269
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN--QLIALEPWNSGNYV 439
G+L +A + M + + + W +++A + A QL + P + V
Sbjct: 270 FGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRP-DLLTVV 327
Query: 440 LLSNIYSASHKWNDAAKIRSMMG 462
L++I+S + +D RS++G
Sbjct: 328 SLTSIFS---QLSDQRISRSILG 347
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/606 (40%), Positives = 360/606 (59%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+ + F+ A E M+ E + N T VL C E F H ++
Sbjct: 370 MIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRH 429
Query: 60 G-LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
G + DE V + + Y CG L A VF + K V SW A+I G++ G +A+++
Sbjct: 430 GFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDL 489
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ + GL+PD F+I +L+AC +L LS K IHG + G + F+ SLV LY +
Sbjct: 490 YLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQ 549
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG + A+ FD M EK++V W++MI G++ N FP +ALDMF+ M + P+ +++G
Sbjct: 550 CGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGA 609
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L AC+ + AL LG F ++ + + +LIDMYAKCG M Q+ +F + K +
Sbjct: 610 LGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGE 669
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WN +++G ++G+ + A +F ++ G +P+ TF+ LL C HAGLV EG ++
Sbjct: 670 VTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQ 729
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M +F + P +EHY C+VD+LGR+G+L+EA EL+ +P +P++ +W +LL+ CR ++ D
Sbjct: 730 MQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLD 789
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
+ E V N+L+ L P + NYVL+SN Y+ KW++ K+R M + G+QK GCSW+E+
Sbjct: 790 IGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIG 849
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
G V FLVGD S S KI EL K+ G+ P T VL ++EE+EK L HSE
Sbjct: 850 GKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSE 909
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA++FGL+ TA +R+ KNLR+C DCH AIKL+SKI REIIVRDN RFH F G C
Sbjct: 910 KLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFC 969
Query: 599 SCKDFW 604
SC D+W
Sbjct: 970 SCGDYW 975
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 226/441 (51%), Gaps = 14/441 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G++ N F+ A+ + M + F+P NFT P V+KAC +D +LG H +K
Sbjct: 166 LLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKT 225
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ D FV +L+ +Y G++ A+KVFD +P +N+VSW +++ + G EE+ +F
Sbjct: 226 KVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLF 285
Query: 120 RRLLH--RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+ LL+ GL PD ++V V+ C + G++ HG + G + V +SL+D+Y+
Sbjct: 286 KGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYS 345
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMV 236
KCG + +AR +FD EK+++SW+SMI GY+ + + A ++ MQ E+ +K T++
Sbjct: 346 KCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLL 404
Query: 237 GVLSAC-ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
VL C + L+L + S+ ++ + YAKCG + A VF M+
Sbjct: 405 NVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMES 464
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
K WNA++ G NG+ + A ++ + G++P+ T LL C + G++
Sbjct: 465 KMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEI 524
Query: 356 FNSMSRV-FSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
SM R F L I C +V L + G++ A +M E N + W ++ G
Sbjct: 525 HGSMLRNGFELDEFI----CISLVSLYVQCGKILLAKLFFDNME-EKNLVCWNTMINGFS 579
Query: 413 LHKKTDLAEHVLNQLIALEPW 433
++ A + +Q+++ + W
Sbjct: 580 QNEFPFDALDMFHQMLSSKIW 600
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 156/295 (52%), Gaps = 5/295 (1%)
Query: 35 FVLKACAREHDFQLGVRSHSLI-VKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD 93
+L+ C + ++G + H+ I D + T L+ +Y C D+ VF+
Sbjct: 98 LLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRR 157
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKW 152
KN+ W A++SGY+ +A+ +F ++ PD+F++ V+ AC + D+ +
Sbjct: 158 KNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEA 217
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+HG+ + +VFV +L+ +Y K G +E A +VFD+MP++++VSW+S++ NG
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 213 PKEALDMFYNMQR--ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
+E+ +F + E L P+ TMV V+ CA G + LG+ + +
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVN 337
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
++L+DMY+KCG + +A +V + +K+ + WN+++ G S + + AF + +++
Sbjct: 338 SSLLDMYSKCGYLCEA-RVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQ 391
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 149/312 (47%), Gaps = 13/312 (4%)
Query: 108 NEGNLEEAINMFRRLLH-----RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK 162
N GNL +A N + L+ KP I +L C + ++ + IH +++ +
Sbjct: 66 NTGNLNQAFNFLQSNLNDVVSSSNSKPKQL-IGLLLQLCGEYKNIEIGRKIHNFISTSPH 124
Query: 163 GRN-VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
+N V + T LV +Y+ C + + VF+ K++ W++++ GY N ++A+ +F
Sbjct: 125 FQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFV 184
Query: 222 NM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
M P+ +T+ V+ AC + + LG F + + LS+ +G LI MY K
Sbjct: 185 EMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKF 244
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC--GIQPNGNTFVG 338
G + A KVF +M ++ V WN+V+ NG + ++G+F L G+ P+ T V
Sbjct: 245 GFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVT 304
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
++ C G V G F+ ++ L ++ ++D+ + G L EA L + E
Sbjct: 305 VIPLCARQGEVRLG-MVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT--NE 361
Query: 399 PNAIVWGALLAG 410
N I W +++ G
Sbjct: 362 KNVISWNSMIGG 373
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 227 NLKPEYYTMVGVL-SACASLGALELGVWASSFMERN-EFLSNPVLGTTLIDMYAKCGRMA 284
N KP+ ++G+L C +E+G +F+ + F ++ VL T L+ MY+ C
Sbjct: 89 NSKPK--QLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPY 146
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQPNGNTFVGLLCGC 343
+C VF + K+ +WNA++SG N + A VF ++ P+ T ++ C
Sbjct: 147 DSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKAC 206
Query: 344 THAGLVDEGRQFF------NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
V G +S VF +I Y G+ G ++ A ++ MP
Sbjct: 207 VGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMY-------GKFGFVESAVKVFDKMP- 258
Query: 398 EPNAIVWGALLAGC 411
+ N + W +++ C
Sbjct: 259 QRNLVSWNSVMYAC 272
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/584 (42%), Positives = 351/584 (60%), Gaps = 35/584 (5%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ V+AG+D D V L Y L + + PD V +T+ I + + G
Sbjct: 55 HAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLH 114
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
A+ + +L RGL P S ++ L AC L+ + +H Y + + +VAT+L
Sbjct: 115 LAALALLSEMLGRGLIPTSHTLSSSLPACH---GLALGRALHAYAFKLALAGDSYVATAL 171
Query: 173 VDLYAKCGNMEKARRVFDQMPE-------------------------------KDIVSWS 201
+ +YA+ G+ + AR +FD+MP+ KD + W+
Sbjct: 172 LGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWN 231
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+MI GY +G P EAL +F M R + P+ ++ LSA A LG E G W S+++ +
Sbjct: 232 AMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNS 291
Query: 262 EFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ N +GT LIDMY KCG + A VF + DKD VVWNA+++G +M+G + A +
Sbjct: 292 RRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEM 351
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F QL G+ P TF+GLL C+H+GLVDEG QFF SM +++ P IEHYGCMVDLLG
Sbjct: 352 FSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLG 411
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
R+G ++EA L++SM + P+ ++W +LLA CRLHK L + + + L+A NSG Y+L
Sbjct: 412 RAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYIL 471
Query: 441 LSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSK 500
LSNIY+A W + A++RSMM GIQK GCS +EV V+EF+ GD SHP +++IY+
Sbjct: 472 LSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAM 531
Query: 501 LDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKN 560
L+++ +K G VP T+ VL D++E K+ LA HSEKLA+AFGLI+TAP + I+I KN
Sbjct: 532 LEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKN 591
Query: 561 LRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LR C DCH +KLISKITGR+I+ RD NRFH F++GSC+C D+W
Sbjct: 592 LRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 635
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 173/350 (49%), Gaps = 39/350 (11%)
Query: 19 NSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC 78
+ M G +PT+ T L AC H LG H+ K L D +V T+LL +Y
Sbjct: 122 SEMLGRGLIPTSHTLSSSLPAC---HGLALGRALHAYAFKLALAGDSYVATALLGMYARG 178
Query: 79 GYLADALKVFDDIPDKNVVS-------------------------------WTAIISGYI 107
G A +FD++PD +VV W A+I GY
Sbjct: 179 GDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYT 238
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR-NV 166
G EA+ +FR +L G+ PD +I+ L+A QLG + +W+H YV + + + N
Sbjct: 239 QHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNA 298
Query: 167 FVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE 226
V T+L+D+Y KCG++E A VF+ + +KDIV W++MI GYA +G ++AL+MF ++ +
Sbjct: 299 RVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQ 358
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMA 284
L P T +G+L+AC+ G ++ G ME E+ P + ++D+ + G +
Sbjct: 359 GLWPTDITFIGLLNACSHSGLVDEGHQFFQSME-EEYAIVPKIEHYGCMVDLLGRAGLIE 417
Query: 285 QACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+A + + M D V+W ++++ ++ + + + L G+ +G
Sbjct: 418 EAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSG 467
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 44/202 (21%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + A+E ++ +R++G PT+ TF +L AC SHS +V G
Sbjct: 335 MINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNAC-----------SHSGLVDEG 383
Query: 61 LDCDEFVKT-----SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
+F ++ +++ H G + D L G +EEA
Sbjct: 384 ---HQFFQSMEEEYAIVPKIEHYGCMVDLLG---------------------RAGLIEEA 419
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
++ + + + PD+ V +L AC +++ + I Y+ AG N + L ++
Sbjct: 420 FHLVQSMT---IAPDTVMWVSLLAACRLHKNMALGQQIADYL-VAGGLANSGMYILLSNI 475
Query: 176 YAKCGNMEKARRVFDQMPEKDI 197
YA GN E+ RV M I
Sbjct: 476 YAAVGNWEEVARVRSMMKASGI 497
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/584 (42%), Positives = 351/584 (60%), Gaps = 35/584 (5%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ V+AG+D D V L Y L + + PD V +T+ I + + G
Sbjct: 54 HAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLH 113
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
A+ + +L RGL P S ++ L AC L+ + +H Y + + +VAT+L
Sbjct: 114 LAALALLSEMLGRGLIPTSHTLSSSLPACH---GLALGRALHAYAFKLALAGDSYVATAL 170
Query: 173 VDLYAKCGNMEKARRVFDQMPE-------------------------------KDIVSWS 201
+ +YA+ G+ + AR +FD+MP+ KD + W+
Sbjct: 171 LGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWN 230
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+MI GY +G P EAL +F M R + P+ ++ LSA A LG E G W S+++ +
Sbjct: 231 AMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNS 290
Query: 262 EFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ N +GT LIDMY KCG + A VF + DKD VVWNA+++G +M+G + A +
Sbjct: 291 RRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEM 350
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F QL G+ P TF+GLL C+H+GLVDEG QFF SM +++ P IEHYGCMVDLLG
Sbjct: 351 FSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLG 410
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
R+G ++EA L++SM + P+ ++W +LLA CRLHK L + + + L+A NSG Y+L
Sbjct: 411 RAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYIL 470
Query: 441 LSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSK 500
LSNIY+A W + A++RSMM GIQK GCS +EV V+EF+ GD SHP +++IY+
Sbjct: 471 LSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAM 530
Query: 501 LDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKN 560
L+++ +K G VP T+ VL D++E K+ LA HSEKLA+AFGLI+TAP + I+I KN
Sbjct: 531 LEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKN 590
Query: 561 LRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LR C DCH +KLISKITGR+I+ RD NRFH F++GSC+C D+W
Sbjct: 591 LRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 634
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 173/350 (49%), Gaps = 39/350 (11%)
Query: 19 NSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC 78
+ M G +PT+ T L AC H LG H+ K L D +V T+LL +Y
Sbjct: 121 SEMLGRGLIPTSHTLSSSLPAC---HGLALGRALHAYAFKLALAGDSYVATALLGMYARG 177
Query: 79 GYLADALKVFDDIPDKNVVS-------------------------------WTAIISGYI 107
G A +FD++PD +VV W A+I GY
Sbjct: 178 GDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYT 237
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR-NV 166
G EA+ +FR +L G+ PD +I+ L+A QLG + +W+H YV + + + N
Sbjct: 238 QHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNA 297
Query: 167 FVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE 226
V T+L+D+Y KCG++E A VF+ + +KDIV W++MI GYA +G ++AL+MF ++ +
Sbjct: 298 RVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQ 357
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMA 284
L P T +G+L+AC+ G ++ G ME E+ P + ++D+ + G +
Sbjct: 358 GLWPTDITFIGLLNACSHSGLVDEGHQFFQSME-EEYAIVPKIEHYGCMVDLLGRAGLIE 416
Query: 285 QACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+A + + M D V+W ++++ ++ + + + L G+ +G
Sbjct: 417 EAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSG 466
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 44/202 (21%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + A+E ++ +R++G PT+ TF +L AC SHS +V G
Sbjct: 334 MINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNAC-----------SHSGLVDEG 382
Query: 61 LDCDEFVKT-----SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
+F ++ +++ H G + D L G +EEA
Sbjct: 383 ---HQFFQSMEEEYAIVPKIEHYGCMVDLLG---------------------RAGLIEEA 418
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
++ + + + PD+ V +L AC +++ + I Y+ AG N + L ++
Sbjct: 419 FHLVQSMT---IAPDTVMWVSLLAACRLHKNMALGQQIADYL-VAGGLANSGMYILLSNI 474
Query: 176 YAKCGNMEKARRVFDQMPEKDI 197
YA GN E+ RV M I
Sbjct: 475 YAAVGNWEEVARVRSMMKASGI 496
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/593 (38%), Positives = 363/593 (61%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ +I+ ++ MR LP +T +L A + Q G H+ + K G + D V +L
Sbjct: 397 EESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNAL 456
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+ +Y+ G + D K+++ + D++++SW A +SG + G + + +F +L G P+
Sbjct: 457 VTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNM 516
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++ + +L +C+ L D+ + +H ++ + N FV T+L+D+YAKC +E A F++
Sbjct: 517 YTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNR 576
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+ +D+ +W+ +I YA ++AL+ F MQ+E +KP +T+ G LS C+SL +LE G
Sbjct: 577 LSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGG 636
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
S + ++ +S+ +G+ L+DMYAKCG M +A +F + +D + WN ++ G + N
Sbjct: 637 QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQN 696
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G A F + GI P+G TF G+L C+H GLV+EG++ FNSM R F ++P ++H
Sbjct: 697 GQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDH 756
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
CMVD+LGR G+ DE + I+ M + NA++W +L ++H L E N+L L+
Sbjct: 757 CACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQ 816
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P +Y+LLSNI++ +W+D ++RS+M KG++K GCSWVE +G VH F+ D SH
Sbjct: 817 PEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSH 876
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P ++I+ KLDEL +L + +VP T++VL ++ E EK+ L HSE+LAL F LI+T+
Sbjct: 877 PQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSS 936
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ IRI KNLR+C DCH+ +K IS IT +EI+VRD RFH F G+CSC DFW
Sbjct: 937 EKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 206/410 (50%), Gaps = 2/410 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ ++ + SM FT VLK CA + + G HSLI+K G
Sbjct: 285 LLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG 344
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +EF+ L+++Y CG DA+ VF I ++V W+A+I+ +G EE+I +F
Sbjct: 345 YEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH 404
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ P+ ++I +L+A T G+L + IH V + G +V V+ +LV +Y K G
Sbjct: 405 LMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNG 464
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ ++++ M ++D++SW++ + G G L +FY+M E P YT + +L
Sbjct: 465 CVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILG 524
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+C+ L + G + + +N+ N + T LIDMYAKC + A F + +D
Sbjct: 525 SCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFT 584
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++ + + A F Q+++ G++PN T G L GC+ ++ G+Q + +
Sbjct: 585 WTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVF 644
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ ++ M +VD+ + G ++EA L +++ + + I W ++ G
Sbjct: 645 KSGHVSDMFVG-SALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 200/378 (52%), Gaps = 2/378 (0%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +L+ CA + + H LIVK ++ D + SL+N+Y C Y A A V +P
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
D++VVSWTA+I G + EG ++I +F+ + + G+ P+ F++ L AC+ L K
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+H + G ++FV ++LVDLYAKCG +E A ++F MPE++ V+W+ ++ GYA G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
L +F +M ++K +T+ VL CA+ L+ G S + + + N +G
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+DMY+KCG A VF+ +K D VVW+A+++ L G + + +F + PN
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
T LL T+ G + G+ + + + + +V + ++G + + +L
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWK-YGFETDVAVSNALVTMYMKNGCVHDGTKLY 473
Query: 393 KSMPMEPNAIVWGALLAG 410
+SM ++ + I W A L+G
Sbjct: 474 ESM-VDRDLISWNAYLSG 490
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 183/354 (51%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+G V+ +I + M+NEG +P FT LKAC+ LG + H+ K G
Sbjct: 184 LIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLG 243
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D FV ++L++LY CG + A K+F +P++N V+W +++GY G++ + +F
Sbjct: 244 LLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFC 303
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ +K + F++ VL C +L + IH + + G N F+ LVD+Y+KCG
Sbjct: 304 SMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCG 363
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
A VF + + DIV WS++I G +E++ +F+ M+ + P YT+ +LS
Sbjct: 364 LAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLS 423
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A + G L+ G + + + F ++ + L+ MY K G + K++ M D+D +
Sbjct: 424 AATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLIS 483
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
WNA +SGL G +F + + G PN TF+ +L C+ V GRQ
Sbjct: 484 WNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQ 537
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 175/309 (56%), Gaps = 6/309 (1%)
Query: 8 NDC--FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
+DC + + + M EGF+P +TF +L +C+ D G + H+ I+K LD +
Sbjct: 492 HDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNN 551
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
FV T+L+++Y C YL DA F+ + +++ +WT II+ Y E+A+N FR++
Sbjct: 552 FVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQE 611
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G+KP+ F++ L+ C+ L L + +H V ++G ++FV ++LVD+YAKCG ME+A
Sbjct: 612 GVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA 671
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+F+ + +D ++W+++I GYA NG +AL F M E + P+ T G+LSAC+
Sbjct: 672 EALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQ 731
Query: 246 GALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWN 302
G +E G + M R +F +P + ++D+ + G+ + ++M+ ++ ++W
Sbjct: 732 GLVEEGKEHFNSMYR-DFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWE 790
Query: 303 AVVSGLSMN 311
V+ M+
Sbjct: 791 TVLGASKMH 799
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + + + A+ ++ M+ EG P FT L C+ + G + HS++ K+G
Sbjct: 588 IITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSG 647
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV ++L+++Y CG + +A +F+ + ++ ++W II GY G +A+ FR
Sbjct: 648 HVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFR 707
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L G+ PD + +L+AC+ G + K + + G V +VD+ +
Sbjct: 708 MMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRV 767
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G ++ +M ++ + W +++
Sbjct: 768 GKFDELEDFIQKMQLSQNALIWETVL 793
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/578 (41%), Positives = 362/578 (62%), Gaps = 3/578 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + TF L ACAR D AG D FV ++LL++Y CG + DA++V
Sbjct: 109 PDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRV 168
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD +P K+ V+W+ +++G+++ G EA+ M+ R+ G+ D +V V+ ACT G+
Sbjct: 169 FDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNT 228
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+HG G +V +ATSLVD+YAK G+ + AR+VF MP ++ VSW+++I G+
Sbjct: 229 RMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGF 288
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF-MERNEFLSN 266
A NG EALD+F M L+P+ +V L ACA +G L+LG F + R EF
Sbjct: 289 AQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRLEF--Q 346
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
+LGT ++DMY+KCG + A K+F ++ +D V+WNA+++ +G A +F +L +
Sbjct: 347 CILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNE 406
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLD 386
GI+P+ TF LL +H+GLV+EG+ +F+ M F + P +H C+VDLL RSG ++
Sbjct: 407 TGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVE 466
Query: 387 EAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYS 446
EA+E++ SM EP +W ALL+GC +KK +L E + +++ +P + G L+SN+Y+
Sbjct: 467 EANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYA 526
Query: 447 ASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELAT 506
A+ KW+ +IR +M D G +K+ G S +EV G H F++ D SHP ++I + +L+
Sbjct: 527 AAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSF 586
Query: 507 KLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
+++ G+VP T+ V D++E+ K+ L+ HSE+LA+AFGL+ T+P + I KNLRVCGD
Sbjct: 587 EMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGD 646
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CH+AIK ISKI REI+VRD RFH F +G+CSC D+W
Sbjct: 647 CHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 185/367 (50%), Gaps = 9/367 (2%)
Query: 50 VRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN--VVSWTAIISGYI 107
R H+L+V + + + SL Y G L A P + +W A+++
Sbjct: 32 TRLHALLV---VSSSQNLFPSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARS 88
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
G+ A+ +FR L +PDS + LTAC +LGDL A+ + AG GR+VF
Sbjct: 89 RAGSPGAALRVFRALPSSA-RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVF 147
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
V ++L+ +Y++CG M A RVFD MP KD V+WS+M+ G+ S G P EAL M+ M+
Sbjct: 148 VCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHG 207
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+ + MVGV+ AC G +G R+ + V+ T+L+DMYAK G A
Sbjct: 208 VAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVAR 267
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+VFR M ++ V WNA++SG + NG+ A +F ++ G+QP+ V L C G
Sbjct: 268 QVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVG 327
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+ G+ + R ++ ++D+ + G L+ A +L + + ++W A+
Sbjct: 328 FLKLGKSIHGFILRRLEFQCILG--TAVLDMYSKCGSLESARKLFNKLSSR-DLVLWNAM 384
Query: 408 LAGCRLH 414
+A C H
Sbjct: 385 IACCGTH 391
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 173/311 (55%), Gaps = 7/311 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GFVS A+ Y+ MR G V++AC + ++G H ++ G
Sbjct: 183 MVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHG 242
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D + TSL+++Y G+ A +VF +P +N VSW A+ISG+ G+ +EA+++FR
Sbjct: 243 MRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFR 302
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GL+PDS ++V L AC +G L K IHG++ + + + + T+++D+Y+KCG
Sbjct: 303 EMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRLEFQCI-LGTAVLDMYSKCG 361
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E AR++F+++ +D+V W++MI ++G +AL +F + +KP++ T +LS
Sbjct: 362 SLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLS 421
Query: 241 ACASLGALELG-VWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDKD 297
A + G +E G W + EF P ++D+ A+ G + +A ++ M +
Sbjct: 422 ALSHSGLVEEGKFWFDRMI--TEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEP 479
Query: 298 QV-VWNAVVSG 307
+ +W A++SG
Sbjct: 480 TIPIWVALLSG 490
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/515 (44%), Positives = 333/515 (64%), Gaps = 9/515 (1%)
Query: 99 WTAIISGYIN-----EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
W +I ++ G I++F R+ G++PD + +L + L + +
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
H + G + FV TSL+ +Y+ G ++ AR +F MPE++++SWS MI GY G
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQY 146
Query: 214 KEALDMFYNMQR---ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
KEAL +F MQ +++P +TM GVL+AC LGALE G WA +++++ + VLG
Sbjct: 147 KEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLG 206
Query: 271 TTLIDMYAKCGRMAQACKVFREM-KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
T LIDMYAKCG + +A VF + +KD + W+A++SGL+M+G + G+F ++ G+
Sbjct: 207 TALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGV 266
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+PN TF+ + C C H GLV EG+ + M+ +S+ P I+HYGCMVDL GR+G++ EA
Sbjct: 267 RPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAW 326
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
++KSMPMEP+ +VWGALL+G R+H + E L +LI LEP NSG YVLLSN+Y+
Sbjct: 327 NVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRG 386
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
+W D +R +M GI+K+ GCS +EV GV+HEF VGD+SHP + +I+ L+E+ +LK
Sbjct: 387 RWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLK 446
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
G+V T VL D++EE K+ L+ HSEKLALA+G + T+P IRI KNLR+C DCH
Sbjct: 447 VEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHV 506
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
AIK+ISK+ REIIVRD NRFH F +G CSC+D+W
Sbjct: 507 AIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 176/307 (57%), Gaps = 6/307 (1%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
I + MR G P TFPF+L++ A LG H+ I++ GL D FV+TSL+++
Sbjct: 49 ISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISM 108
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG---LKPDS 131
Y G + A +F +P++NV+SW+ +I+GY+ G +EA+ +FR + G ++P+
Sbjct: 109 YSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 168
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
F++ VL AC +LG L KW H Y+++ G +V + T+L+D+YAKCG++EKA VF
Sbjct: 169 FTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSN 228
Query: 192 M-PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+ P KD+++WS+MI G A +G +E + +F M + ++P T + V AC G +
Sbjct: 229 LGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSE 288
Query: 251 GV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGL 308
G + E + ++D+Y + GR+ +A V + M + D +VW A++SG
Sbjct: 289 GKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGS 348
Query: 309 SMNGYVK 315
M+G ++
Sbjct: 349 RMHGDIE 355
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/570 (41%), Positives = 355/570 (62%), Gaps = 5/570 (0%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL--NLYVHCGYLADALKVFDDIPDK 94
+K C R D + +++H +V+A L D F+ + L+ + G++A A ++F
Sbjct: 14 IKRCTRVGDLK-AIQAH--MVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHP 70
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
N+ W II GY + AI ++R + G+ P+S++ VL AC +L L + +H
Sbjct: 71 NLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELH 130
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
+ + G + L+ LYA CG M+ A +FD+MPE D SWS+M+ GYA NG
Sbjct: 131 SQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAV 190
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
EAL +F MQ EN+ + +T+ V+ C LGAL+LG W S+M++ + VLGT L+
Sbjct: 191 EALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALV 250
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
MY+KCG + A KVF+ M ++D W+ +++G +++G+ + A +F +++ PN
Sbjct: 251 GMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCV 310
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
TF +L C+H+GLV++G Q F +M + +TP I+HYGCMVDL R+G + AH+ I++
Sbjct: 311 TFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQT 370
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDA 454
MP+EPN ++W LL C+ H DL EH+ +++ L+P + NYVL+SN+Y++ +W+
Sbjct: 371 MPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSV 430
Query: 455 AKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFV 514
++RS+M DK +K G S +E++ +VH+F++GD SHP EKIY L ++A KLK G V
Sbjct: 431 CQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHV 490
Query: 515 PTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLI 574
+T VL DI+EEEK+Y L HSE+LA+A+GL+ T IRI KNLRVC DCHE IKLI
Sbjct: 491 NSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLI 550
Query: 575 SKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
S++ REIIVRD RFH F E CSC D+W
Sbjct: 551 SEVYNREIIVRDRVRFHHFRERGCSCNDYW 580
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 172/316 (54%), Gaps = 4/316 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ +D AI Y M G P ++TF FVLKAC + G HS IVK G
Sbjct: 78 IIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVG 137
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + + L+ LY CG + A +FD++P+ + SW+ ++SGY G EA+ +FR
Sbjct: 138 LDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFR 197
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + D+F++ V+ C LG L KW+H Y+++ G +V + T+LV +Y+KCG
Sbjct: 198 EMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCG 257
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A +VF M E+D+ +WS+MI GYA +G ++AL +F M+R P T VLS
Sbjct: 258 SLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLS 317
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G +E G M E+ P + ++D++ + G + A K + M + +
Sbjct: 318 ACSHSGLVEKGHQIFETM-WTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPN 376
Query: 298 QVVWNAVVSGLSMNGY 313
V+W ++ +GY
Sbjct: 377 VVLWRTLLGACKTHGY 392
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 143/305 (46%), Gaps = 9/305 (2%)
Query: 127 LKP--DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC--GNM 182
+KP D S+V + CT++GDL K I ++ A ++ F+ + L++ A G++
Sbjct: 1 MKPMLDQGSLVAAIKRCTRVGDL---KAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHV 57
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
A R+F ++ W+++I+GY+ + P A+ ++ +M + P YT VL AC
Sbjct: 58 AYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKAC 117
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
L L G S + + L LI +YA CG M AC +F EM + D W+
Sbjct: 118 CKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWS 177
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
+VSG + NG A +F +++ + + T ++ C G +D G+ + M +
Sbjct: 178 TMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKE 237
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
++ +V + + G LD A ++ + M E + W ++AG +H + A
Sbjct: 238 GVKIDVVLGTA-LVGMYSKCGSLDNALKVFQGMA-ERDVTAWSTMIAGYAIHGHGEKALQ 295
Query: 423 VLNQL 427
+ + +
Sbjct: 296 LFDAM 300
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/569 (41%), Positives = 351/569 (61%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+LK CA+ G H+ I+ GL D L+N+Y CG + A +VFD++P ++
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+VSW +I G EA+++ ++ G F+I VL AC LS + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ +A NVFVAT+L+D+YAKCG M+ A VF+ MP++ +V+WSSM GY N ++
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL +F LK + + M V+ ACA L A+ G ++ + ++ F SN + ++LID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MYAKCG + ++ KVFR+++ ++ V+WNA++SGLS + +F ++++ G+ PN T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
FV +L C H GLV +G+++F+ M++ L P + HY CMVD L R+GQ+ EA++LI +
Sbjct: 370 FVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
P +A +WG+LLA CR H +LAE +L +EP NSGNY+LLSN+Y+A+ KW++ A
Sbjct: 430 PFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVA 489
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
K+R ++ + ++K RG SW+E+ VH F+VG+ +HP +IYSKL+E+ +L+ G+
Sbjct: 490 KMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKV 549
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
T H L + E KQ L HSEKLA GL+ P IRI KNLR+CGDCH +KL S
Sbjct: 550 ETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLAS 609
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K R++IVRD NRFH F G CSC DFW
Sbjct: 610 KFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 179/319 (56%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI N A++ M+ EG + FT VL ACA + H+ +KA
Sbjct: 136 MIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAA 195
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D + FV T+LL++Y CG + DA+ VF+ +PD++VV+W+++ +GY+ E+A+ +FR
Sbjct: 196 MDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFR 255
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GLK D F + V+ AC L + K ++ ++++G N+FVA+SL+D+YAKCG
Sbjct: 256 KAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCG 315
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E++ +VF + ++++V W++MI G + + E + +F MQ+ L P T V VLS
Sbjct: 316 GIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLS 375
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC +G ++ G M + L+ V + ++D ++ G++ +A + ++ +
Sbjct: 376 ACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASA 435
Query: 299 VVWNAVVSGLSMNGYVKVA 317
+W ++++ +G +++A
Sbjct: 436 SMWGSLLASCRTHGNLELA 454
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/558 (42%), Positives = 348/558 (62%)
Query: 47 QLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY 106
Q+ + HS ++K ++ D FV L+++Y C L DA F+ +P+K++++W AIISGY
Sbjct: 349 QMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 408
Query: 107 INEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNV 166
EA+++F + G+ + ++ +L + L + + +HG ++G ++
Sbjct: 409 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDI 468
Query: 167 FVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE 226
+V SL+D Y KC ++E A R+F++ D+VS++SMI YA G +EAL +F MQ
Sbjct: 469 YVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDM 528
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
LKP+ + +L+ACA+L A E G + + F+ + G +L++MYAKCG + A
Sbjct: 529 ELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 588
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
+ F E+ ++ V W+A++ GL+ +G+ + A +F Q+ K G+ PN T V +L C HA
Sbjct: 589 GRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHA 648
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
GLV E + +F SM +F PM EHY CM+DLLGR+G+++EA EL+ MP E NA VWGA
Sbjct: 649 GLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGA 708
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
LL R+HK +L L LEP SG +VLL+NIY+++ KW + A++R +M D +
Sbjct: 709 LLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKV 768
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
+K G SW+EV V+ FLVGD SH S++IY+KLDEL+ + AG+VP + L D+E+
Sbjct: 769 KKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQ 828
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
EK+ L HSEKLA+AFGLI T IR+ KNLRVC DCH A K I KI REIIVRD
Sbjct: 829 SEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRD 888
Query: 587 NNRFHCFIEGSCSCKDFW 604
NRFH F +GSCSC D+W
Sbjct: 889 INRFHHFKDGSCSCGDYW 906
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 144/503 (28%), Positives = 243/503 (48%), Gaps = 67/503 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N A+ ++ M G FTF VLKAC+ D ++G + H ++V +G
Sbjct: 128 LISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSG 187
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+ +Y C D+ ++FD+IP++NVVSW A+ S Y+ EA+ +F
Sbjct: 188 FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFY 247
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+KP+ FS+ ++ ACT L D S K IHGY+ + G + F A +LVD+YAK G
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVG 307
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A VF+++ + DIVSW+++I G + ++AL++ M+R+
Sbjct: 308 DLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ-------------- 353
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+SL ++ ME + F+S L+DMY+KC + A F + +KD +
Sbjct: 354 LHSSLMKMD--------MESDLFVS-----VGLVDMYSKCDLLEDARMAFNLLPEKDLIA 400
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS-- 358
WNA++SG S A +F ++ K GI N T +L +V RQ
Sbjct: 401 WNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSV 460
Query: 359 ----MSRVFSLTPMIEHYG------------------------CMVDLLGRSGQLDEAHE 390
S ++ + +I+ YG M+ + GQ +EA +
Sbjct: 461 KSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALK 520
Query: 391 L---IKSMPMEPNAIVWGALLAGC----RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
L ++ M ++P+ V +LL C + L H+L L+ + +GN L N
Sbjct: 521 LFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIF-AGNS--LVN 577
Query: 444 IYSASHKWNDAAKIRSMMGDKGI 466
+Y+ +DA + S + ++GI
Sbjct: 578 MYAKCGSIDDAGRAFSELTERGI 600
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 200/392 (51%), Gaps = 29/392 (7%)
Query: 19 NSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC 78
N + F PT+ ++ +L C + G++ H+ I K+GL D ++ L+NLY C
Sbjct: 45 NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC 104
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
A K+ D+ + ++VSW+A+ISGY G A+ F + G+K + F+ VL
Sbjct: 105 RXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
AC+ + DL K +HG V +G +VFVA +LV +YAKC ++R+FD++PE+++V
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV 224
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
SW+++ Y F EA+ +FY M +KP +++ +++AC L G ++
Sbjct: 225 SWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYL 284
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ + +P L+DMYAK G +A A VF ++K D V WNAV++G ++ + + A
Sbjct: 285 IKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQAL 344
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
+ GQ++ RQ +S+ ++ + + G +VD+
Sbjct: 345 ELLGQMK---------------------------RQLHSSLMKMDMESDLFVSVG-LVDM 376
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ L++A +P E + I W A+++G
Sbjct: 377 YSKCDLLEDARMAFNLLP-EKDLIAWNAIISG 407
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 162/306 (52%), Gaps = 2/306 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ + M EG T +LK+ A + + H L VK+G D +V SL++
Sbjct: 417 ALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLID 476
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
Y C ++ DA ++F++ ++VS+T++I+ Y G EEA+ +F + LKPD F
Sbjct: 477 SYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFV 536
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+L AC L K +H ++ + G ++F SLV++YAKCG+++ A R F ++
Sbjct: 537 CSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT 596
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL-ELGV 252
E+ IVSWS+MI G A +G ++AL +F M +E + P + T+V VL AC G + E +
Sbjct: 597 ERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKL 656
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMN 311
+ S E F +ID+ + G++ +A ++ +M + + VW A++ ++
Sbjct: 657 YFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIH 716
Query: 312 GYVKVA 317
V++
Sbjct: 717 KDVELG 722
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 106/206 (51%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + A++ + M++ P F +L ACA F+ G + H I+K G
Sbjct: 505 MITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 564
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D F SL+N+Y CG + DA + F ++ ++ +VSW+A+I G G+ +A+ +F
Sbjct: 565 FVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFN 624
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS-LVDLYAKC 179
++L G+ P+ ++V VL AC G ++ AK + E + + + ++DL +
Sbjct: 625 QMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRA 684
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G + +A + ++MP E + W +++
Sbjct: 685 GKINEAVELVNKMPFEANASVWGALL 710
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 257/671 (38%), Positives = 367/671 (54%), Gaps = 68/671 (10%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
I+ F + F H I ++ M +G +P + P V+K CA Q G + H + +GL
Sbjct: 46 IQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGL 105
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK--------------------------- 94
D V +SLL++YV +L DA VFD +P
Sbjct: 106 GLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQ 165
Query: 95 --------NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
N+VSW +ISG+ G+ +A+ MF+ + GLKPD S+ VL A L
Sbjct: 166 TRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDM 225
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI--------- 197
IH YV + G G + FV ++L+D+Y KC + VF++M E D+
Sbjct: 226 PLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTG 285
Query: 198 ------------------------VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
VSW+SMI + NG EAL++F MQ E +KP
Sbjct: 286 LSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSV 345
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T+ +L AC ++ AL G A F RN ++ +G+ LIDMYAKCGRM + F M
Sbjct: 346 TIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMM 405
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
+++ V WN++++G +M+G A +F +++CG +P+ +F +L CT GL +EG
Sbjct: 406 PNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGW 465
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+F+SMSR + +EHY CMV LLGRSG+L+EA+ +IK MP EP++ VWGALL+ CR+
Sbjct: 466 FYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRV 525
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
H + DL E ++ LEP N GNY+LLSNIY++ W + +R MM +G++K G S
Sbjct: 526 HNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYS 585
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
W+E+ VH L GD+SHP +I KL +L ++K +G+VP TD VL D+EE++K+ L
Sbjct: 586 WIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQIL 645
Query: 534 ACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF 593
HSEKLA+ GL+ T P +++ KNLR+C DCH IK IS REI VRD NRFH F
Sbjct: 646 CGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQF 705
Query: 594 IEGSCSCKDFW 604
G CSC D+W
Sbjct: 706 KGGVCSCGDYW 716
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 176/352 (50%), Gaps = 35/352 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF + + A+ + +M EG P + VL A +G++ H ++K G
Sbjct: 181 MISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQG 240
Query: 61 LDCDEFVKTSLLNLYVHC-------------------------------GYLADALKVFD 89
L D+FV ++L+++Y C G + +AL+VF
Sbjct: 241 LGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFK 300
Query: 90 DIP--DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
D NVVSWT++I+ G EA+ +FR + G+KP+S +I +L AC + L
Sbjct: 301 QFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAAL 360
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
K H + G +V+V ++L+D+YAKCG M +R FD MP +++VSW+S++ GY
Sbjct: 361 LHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGY 420
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A +G EA+++F MQR KP++ + VLSAC G E G + M RN +
Sbjct: 421 AMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEAR 480
Query: 268 VLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
+ + ++ + + GR+ +A + ++M + D VW A++S ++ V +
Sbjct: 481 MEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLG 532
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 166/393 (42%), Gaps = 72/393 (18%)
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
K +S I + + I +F +L +G+ PDS + V+ C L L T K +
Sbjct: 37 KTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQM 96
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-------------------- 193
H + +G G + V +SL+ +Y + +++ AR VFD++P
Sbjct: 97 HCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRV 156
Query: 194 ---------------EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
E ++VSW+ MI G+ +G +A+ MF NM E LKP+ ++ V
Sbjct: 157 KETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSV 216
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L A L +G+ ++ + + + + LIDMY KC ++ VF EM + D
Sbjct: 217 LPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDV 276
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
NA+V+GLS NG V A VF Q + G+ N ++ ++ C+ G E + F
Sbjct: 277 GACNALVTGLSRNGLVDNALEVFKQFK--GMDLNVVSWTSMIASCSQNGKDMEALELFRE 334
Query: 359 M------------------------------SRVFSLTPMI--EHY--GCMVDLLGRSGQ 384
M + FSL I + Y ++D+ + G+
Sbjct: 335 MQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGR 394
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
+ + MP N + W +L+AG +H KT
Sbjct: 395 MLASRLCFDMMP-NRNLVSWNSLMAGYAMHGKT 426
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/569 (41%), Positives = 351/569 (61%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+LK CA+ G H+ I+ GL D L+N+Y CG + A +VFD++P ++
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+VSW +I G EA+++ ++ G F+I VL AC LS + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ +A NVFVAT+L+D+YAKCG M+ A VF+ MP++ +V+WSSM GY N ++
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL +F LK + + M V+ ACA L A+ G ++ + ++ F SN + ++LID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MYAKCG + ++ KVFR+++ ++ V+WNA++SGLS + +F ++++ G+ PN T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
FV +L C H GLV +G+++F+ M++ L P + HY CMVD L R+GQ+ EA++LI +
Sbjct: 370 FVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
P +A +WG+LLA CR H +LAE +L +EP NSGNY+LLSN+Y+A+ KW++ A
Sbjct: 430 PFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVA 489
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
K+R ++ + ++K RG SW+E+ VH F+VG+ +HP +IYSKL+E+ +L+ G+
Sbjct: 490 KMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKV 549
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
T H L + E KQ L HSEKLA GL+ P IRI KNLR+CGDCH +KL S
Sbjct: 550 ETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLAS 609
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K R++IVRD NRFH F G CSC DFW
Sbjct: 610 KFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 178/319 (55%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI N A++ M+ EG + FT VL ACA + H+ +KA
Sbjct: 136 MIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAA 195
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D + FV T+LL++Y CG + DA+ VF+ +PD++VV+W+++ +GY+ E+A+ +FR
Sbjct: 196 MDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFR 255
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GLK D F + V+ AC L + K ++ ++++G N+FVA+SL+D+YAKCG
Sbjct: 256 KAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCG 315
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E++ +VF + ++++V W++MI G + + E + +F MQ+ L P T V VLS
Sbjct: 316 GIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLS 375
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC +G + G M + L+ V + ++D ++ G++ +A + ++ +
Sbjct: 376 ACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASA 435
Query: 299 VVWNAVVSGLSMNGYVKVA 317
+W ++++ +G +++A
Sbjct: 436 SMWGSLLASCRTHGNLELA 454
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/661 (37%), Positives = 377/661 (57%), Gaps = 72/661 (10%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQ--LGVRSHSLIVKAGL-DCDEFVKT 69
H + MR+ G FTF FV + CA + L + H+ ++ L V
Sbjct: 85 HPVLLLRRMRSGGVRTGAFTFHFVFRCCAAGARARAGLCLMLHAACLRTMLPSAAPLVAN 144
Query: 70 SLLNLYVHCGYLADALKVFDDIP-------------------------------DKNVVS 98
L+++Y G DA + FD+IP ++NVVS
Sbjct: 145 PLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVS 204
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL-------------- 144
WT++I+GY G +A+ F +L G+ PD +++ L+AC++L
Sbjct: 205 WTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVG 264
Query: 145 ---------------------GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
GD++ A+ + V G+G+ +++D Y K G+++
Sbjct: 265 QKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAV---GRGQKPEPWNAIIDGYCKLGHVD 321
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
AR +FDQM +D+++++SMI GY +G ++AL +F M+R ++ + +T+V +L+ACA
Sbjct: 322 VARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACA 381
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
SLGAL G + +E+ + LGT L+DMY KCGR+ +A VF M ++D W A
Sbjct: 382 SLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTA 441
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++GL+ NG K A F Q+++ G QP T++ +L C+H+ L+DEGR FN M +
Sbjct: 442 MIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLH 501
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
L P +EHYGCM+DLL RSG LDEA L+++MPM+PNA++WG++L+ CR+HK DLA H
Sbjct: 502 KLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHA 561
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
L+ L P YV L NIY S +W DA ++R +M ++G++K G S + V G VH+
Sbjct: 562 AEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHK 621
Query: 484 FLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALA 543
F+ D SHP + +I + ++E+A +LK+ G+ P T + D++EEEK+ L HSEK+A+A
Sbjct: 622 FVANDQSHPWTLEIMAMMEEIACRLKSVGYSPVTSRIAVDVDEEEKEQALLAHSEKIAIA 681
Query: 544 FGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
FGLI+ P I I KNLRVC DCH AIKL+S++ REIIVRD +RFH F +G+CSC DF
Sbjct: 682 FGLISLPPSLPIHIVKNLRVCEDCHSAIKLVSQLWNREIIVRDRSRFHHFRDGACSCNDF 741
Query: 604 W 604
W
Sbjct: 742 W 742
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 180/433 (41%), Gaps = 81/433 (18%)
Query: 53 HSLIVKAGL----DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSW-TAIISGYI 107
H+L+ +G E + +SL N +L L +FD +P + TA+ +
Sbjct: 19 HALLTTSGRIAHRPSAEHLLSSLTNTISAPRHLRYVLSLFDRLPHSTTFLFDTALRACLQ 78
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ-------LGDLSTAKWIHGYVNEA 160
+ + + RR+ G++ +F+ V C L + A + + A
Sbjct: 79 ASAGADHPVLLLRRMRSGGVRTGAFTFHFVFRCCAAGARARAGLCLMLHAACLRTMLPSA 138
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD------------------------ 196
VA L+ +YA G + ARR FD++P KD
Sbjct: 139 AP----LVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLL 194
Query: 197 -------IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
+VSW+S+I GY+ G P +A+ F M + + P+ ++G LSAC+ L L+
Sbjct: 195 VQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLD 254
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA----------------------- 286
LG + + L LIDMYAKCG +AQA
Sbjct: 255 LGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGY 314
Query: 287 CK---------VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
CK +F +M +D + +N++++G +G ++ A +F Q+ + G++ + T V
Sbjct: 315 CKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVV 374
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
LL C G + GR S+ + + + ++D+ + G++DEA + M
Sbjct: 375 SLLTACASLGALPHGRALHASIEQRI-VEEDVYLGTALLDMYMKCGRVDEATAVFHRMG- 432
Query: 398 EPNAIVWGALLAG 410
E + W A++AG
Sbjct: 433 ERDVHTWTAMIAG 445
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G++ + + A++ + MR G NFT +L ACA G H+ I +
Sbjct: 341 MITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRI 400
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D ++ T+LL++Y+ CG + +A VF + +++V +WTA+I+G G ++A+ F
Sbjct: 401 VEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFC 460
Query: 121 RLLHRGLKPDSFSIVRVLTACT----------QLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
++ G +P S + + VLTAC+ ++ + +H V G
Sbjct: 461 QMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYG--------- 511
Query: 171 SLVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMIQG 206
++DL A+ G +++A + MP + + V W S++
Sbjct: 512 CMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSA 548
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/604 (39%), Positives = 359/604 (59%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F + A+ ++ M+ EG LP TF +L + R H LI + G
Sbjct: 333 IITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHG 392
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD ++ +L+N+Y C DA VFD + N++SW ++I Y+ ++A+ +FR
Sbjct: 393 LDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFR 452
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +G++PD + + +L ACT T K +H V E+G G + V TSLV++YAK G
Sbjct: 453 TMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAG 512
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A + +M E+ I +W+ +I GYA +G +EAL+ + +Q E + + T + VL+
Sbjct: 513 ELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLN 572
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC S +L G S S+ ++ L +MY+KCG M A ++F M + V
Sbjct: 573 ACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVS 632
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN ++ + +G + + ++E+ G++ NG TFV +L C+HAGL+ EG Q+F+S+
Sbjct: 633 WNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLG 692
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ EHYGC+VDLLGR+G+L EA + I MP+EP + W +LL CR+ K D
Sbjct: 693 HDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRG 752
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ +L+ L+P NS V+LSNIYS W +AAK+R M + ++K+ G S ++V
Sbjct: 753 KLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNK 812
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEF V D SHP + +IY K++EL ++ AG+VP T VL D++EE+K+ LA HSEKL
Sbjct: 813 VHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKL 872
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI+T + I KNLRVC DCH A K ISKITGREI+VRDN+RFH F +GSCSC
Sbjct: 873 AIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSC 932
Query: 601 KDFW 604
KD+W
Sbjct: 933 KDYW 936
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 218/417 (52%), Gaps = 19/417 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + S FQ A+ +++M EG P T VL +C + + G+ H+L ++ G
Sbjct: 29 MISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSLERG 88
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL-EEAINMF 119
+ V T+LLN+Y CG L DA VF+++ +KNVV+W A++ Y +G + A+ +F
Sbjct: 89 FFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELF 148
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+L G+K + + + VL + L K+IH V E+ +VFV T+LV+ Y KC
Sbjct: 149 TRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKC 208
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ AR+VFD MP + + +W+SMI Y+ + EA +F MQ+E + + T + +L
Sbjct: 209 GSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSIL 268
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC + L+ G + F + +GT LI MYA+C A +VF MK + +
Sbjct: 269 DACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLI 328
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W+A+++ + +G+ A F +++ GI PN TF+ LL G T ++E +
Sbjct: 329 TWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEE-------L 381
Query: 360 SRVFSLTPMIEH--------YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
SR+ L + EH +V++ GR D+A + + + PN I W +++
Sbjct: 382 SRIHLL--ITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLEL-PNLISWNSMI 435
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 202/418 (48%), Gaps = 2/418 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + ++ A + M+ EG TF +L AC Q G I +
Sbjct: 232 MISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETS 291
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV T+L+ +Y C DA +VF + N+++W+AII+ + + G+ EA+ FR
Sbjct: 292 FELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFR 351
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ P+ + + +L T L IH + E G + +LV++Y +C
Sbjct: 352 MMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCE 411
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + AR VFDQ+ +++SW+SMI Y +AL +F MQ++ ++P+ + +L
Sbjct: 412 SPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILG 471
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC +E + +P++ T+L++MYAK G + A + +EM ++
Sbjct: 472 ACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITA 531
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++G +++G + A + +L+ I + TF+ +L CT + + EG+ +S +
Sbjct: 532 WNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGK-MIHSNA 590
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
L + + ++ + G ++ A + SMP+ +A+ W +L H +++
Sbjct: 591 VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR-SAVSWNGMLQAYAQHGESE 647
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 178/339 (52%), Gaps = 5/339 (1%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG L DA+ F I +NVVSW +IS Y + + +EA+ +F +L G+ P++ +
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+V VL +C +L +H E G +N VAT+L+++Y KCG + A+ VF++M
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 194 EKDIVSWSSMIQGYASNGFP-KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
EK++V+W++M+ Y+ G K A+++F M E +K T + VL++ AL G
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ S + +E + + T L++ Y KCG + A KVF M + WN+++S S++
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEH 371
AF +F ++++ G + + TF+ +L C + + G+ S+S F L +
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG- 299
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++ + R ++A ++ M + N I W A++
Sbjct: 300 -TALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITA 336
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/589 (41%), Positives = 352/589 (59%), Gaps = 37/589 (6%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALK--VFDDIPDKNVVSWTAIISGYINEG 110
H+ I + GL+ FV LL D VF + N WTA+I GY +G
Sbjct: 59 HAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQG 118
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVA 169
E++ ++ + +G+ P SF+ +L AC+ D++ + +H + G G +++V
Sbjct: 119 PFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVG 178
Query: 170 TSLVDLYAKCG-------------------------------NMEKARRVFDQMPEKDIV 198
+L+D+Y KCG NME A +FD +P KD+V
Sbjct: 179 NTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMV 238
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+W++M+ GYA N P+EAL++F MQ +K + T+VGV+SACA LGA + W
Sbjct: 239 AWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVA 298
Query: 259 ERNEF--LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
E++ F SN V+G+ LIDMYAKCG + A KVF M++++ +++++ G +M+G
Sbjct: 299 EQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGA 358
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A +F ++ K I+PN TF+G+L C+HAG+V++G+Q F M + P +HY CMV
Sbjct: 359 AMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMV 418
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSG 436
DLLGR+G+L+EA L+K MPM P+ VWGALL CR+H D+A+ + L LEP G
Sbjct: 419 DLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIG 478
Query: 437 NYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE-VDGVVHEFLVGDNSHPLSE 495
NY+LLSNIY+++ +W+D +K+R +M KG++K GCSWVE G++HEF GD SHP S
Sbjct: 479 NYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSR 538
Query: 496 KIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVI 555
+I L++L +LK G+ P V +DI +EEK+ L HSEKLALAFGL+TT I
Sbjct: 539 EIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTI 598
Query: 556 RIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
RI KNLR+C DCH + S+ITGREI+VRDN RFH F +G CSC +FW
Sbjct: 599 RIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 197/369 (53%), Gaps = 38/369 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHS-LIVKA 59
+IRG+ F ++ YNSMR +G P +FTF +LKAC+ D LG + H+ I+
Sbjct: 110 LIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIG 169
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE------ 113
G D +V +L+++YV CG L +VFD++ D++V+SWT++I Y GN+E
Sbjct: 170 GFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELF 229
Query: 114 -------------------------EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
EA+ +F R+ G+K D ++V V++AC QLG
Sbjct: 230 DGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAK 289
Query: 149 TAKWIHGYVNEAGKG--RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
A W+ ++G G NV V ++L+D+YAKCG++E A +VF++M E+++ S+SSMI G
Sbjct: 290 YANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVG 349
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER-NEFLS 265
+A +G A+++F M + +KP T +GVL+AC+ G +E G + ME +
Sbjct: 350 FAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAP 409
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ ++D+ + GR+ +A + + M + VW A++ ++G +A L
Sbjct: 410 SEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHL 469
Query: 325 EKCGIQPNG 333
+ ++PNG
Sbjct: 470 FE--LEPNG 476
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/514 (43%), Positives = 336/514 (65%), Gaps = 31/514 (6%)
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
++ +G+KP+ F++ V+ AC + L K H Y+ + G +V V T+LV +YA+CG+
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 182 MEKARRVFD-------------------------------QMPEKDIVSWSSMIQGYASN 210
+E A VFD +M E+D+VSW+++I GYA N
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G+ E+L++F M++ +K + + M VLSACA L ALELG +++ ++ F + V+G
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
+ L+DMYAK G M AC+VF +M +++V WN++++G + +G A +F Q+ + GI+
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
PN +FVG+L C+H GLV+EGR +FN M++ + + P + HY CM+DLLGR+G LDEA
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
I MP+EP+ VWGALL CR+H T+LA+ + L+ +E +G YVLLSNIY+A+ +
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360
Query: 451 WNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKA 510
W+DAAK+R +M D+G+ K G SW+EV ++H F+ G+ SHP ++I+ L+ L+ K+KA
Sbjct: 361 WDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKA 420
Query: 511 AGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEA 570
AG+VP + VL D+E++EK+ L+ HSEKLA+AFG+I T P IR+AKNLRVCGDCH
Sbjct: 421 AGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTV 480
Query: 571 IKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IK IS R+I+VRD NRFH F +G CSC D+W
Sbjct: 481 IKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 178/330 (53%), Gaps = 33/330 (10%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M +G P FT V+KACA + G ++H+ I+K G + D V+T+L+++Y CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 81 LADA-------------------------------LKVFDDIPDKNVVSWTAIISGYINE 109
L DA LK+F ++ +++VVSWTA+I+GY
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
G +E++N+F ++ G+K D F + VL+AC L L + H YV ++G ++ V
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
++LVD+YAK G+ME A +VFD+MP+++ VSW+S+I G A +G +A+ +F M + +K
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACK 288
P + VGVLSAC+ G + G + M +N + V T +ID+ + G + +A
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300
Query: 289 VFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
M + D VW A++ ++G ++A
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELA 330
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 8/209 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N ++ +N MR G F VL ACA +LG + H+ +V++G
Sbjct: 113 VIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSG 172
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V ++L+++Y G + DA +VFD +P +N VSW +II+G G +A+ +F
Sbjct: 173 FALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFE 232
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN----EAGKGRNVFVATSLVDLY 176
++L G+KP+ S V VL+AC+ G ++ + GY N G +V T ++DL
Sbjct: 233 QMLQAGIKPNEISFVGVLSACSHTGLVNEGR---GYFNLMTQNYGIVPDVSHYTCMIDLL 289
Query: 177 AKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ G +++A + MP E D+ W +++
Sbjct: 290 GRAGCLDEAENFINGMPVEPDVSVWGALL 318
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/613 (39%), Positives = 356/613 (58%), Gaps = 41/613 (6%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + +LK C ++ + G + H+ I +G ++ LL++Y CG L DA KV
Sbjct: 117 PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKV 175
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ---- 143
FD++ +++ SW +ISGY+ GN E+A N+F ++ +R D+FS +++ C Q
Sbjct: 176 FDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTAIISGCVQHNRP 231
Query: 144 --------------------------------LGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+ L K IHG++ G + V S
Sbjct: 232 EEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCS 291
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
L+D+Y KCG++E+AR +FD+M E+D+VSW++MI Y NG +E +F ++ N+ P
Sbjct: 292 LLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPN 351
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
+T GVL+ACA L A +LG ++M R F S + L+ MY+KCG + A VF
Sbjct: 352 DFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFE 411
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
+ D W +++ G + +G A F L K G +P+G F+G+L C HAGLVD+
Sbjct: 412 ILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDK 471
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G ++F+S+ LT I+HY C++DLL R+GQ EA +I MP++P+ +W ALL GC
Sbjct: 472 GLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGC 531
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
R+H +LA+ L +EP N YV L+NIY+++ + A IR M +GI K G
Sbjct: 532 RIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPG 591
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
SW+E+ VH F VGDNSHP S++I L EL+ ++K G+VP T+ VL D+E E+K+
Sbjct: 592 MSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEE 651
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L+ HSEKLA+AFG+I+T I++ KNLR C DCH AIK IS ITGR+IIVRD+NRFH
Sbjct: 652 NLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFH 711
Query: 592 CFIEGSCSCKDFW 604
CF GSCSCKD+W
Sbjct: 712 CFEGGSCSCKDYW 724
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 192/363 (52%), Gaps = 6/363 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I G V ++ + A+E Y M+ + +N T L A A +G + H I++
Sbjct: 221 IISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRM 280
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD DE V SLL++Y CG + +A +FD + +++VVSWT +I Y+ G EE +F
Sbjct: 281 GLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALF 340
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R L++ + P+ F+ VL AC L K IH Y+ G A++LV +Y+KC
Sbjct: 341 RHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKC 400
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++E A+ VF+ +P+ D+ SW+S++ GYA +G +AL F + + KP+ +GVL
Sbjct: 401 GDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVL 460
Query: 240 SACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-D 297
SACA G ++ G+ + S E++ +ID+ A+ G+ +A + EM K D
Sbjct: 461 SACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPD 520
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFF 356
+ +W A++ G ++G +++A L + I+P N T+V L AG+ E
Sbjct: 521 KYIWAALLGGCRIHGNLELAKRAAKSLFE--IEPENPATYVTLANIYASAGMRAEEANIR 578
Query: 357 NSM 359
+M
Sbjct: 579 ETM 581
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 165/352 (46%), Gaps = 39/352 (11%)
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
+ L EA+ +LL+R KP + + +L C + L K +H ++ +G +++
Sbjct: 101 QSRLREAV----QLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYI 155
Query: 169 ATSLVDLYAKC-------------------------------GNMEKARRVFDQMPEKDI 197
+ L+D+YAKC GN EKAR +FD+MP +D
Sbjct: 156 SNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDN 215
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRENL-KPEYYTMVGVLSACASLGALELGVWASS 256
SW+++I G + P+EAL+++ MQ+ + K T+ L+A A++ +L +G
Sbjct: 216 FSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHG 275
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
+ R S+ V+ +L+DMY KCG + +A +F +M+++D V W ++ NG +
Sbjct: 276 HIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREE 335
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
F +F L I PN TF G+L C D G+Q M RV +V
Sbjct: 336 GFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRV-GFDSFSSAASALV 394
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ + G ++ A + + +P +P+ W +LL G H + D A H L+
Sbjct: 395 HMYSKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQHGQHDKALHFFELLL 445
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/605 (38%), Positives = 361/605 (59%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF N FQ A+ + MR EG + T F VL+AC Q G + H L+VK G
Sbjct: 147 IITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCG 206
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
C+ FV ++L ++Y CG L+DA K F+++P K+ V WT++I G++ G+ ++A+ +
Sbjct: 207 FGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYM 266
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ + D + L+AC+ L S K +H + + G F+ +L D+Y+K G
Sbjct: 267 KMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSG 326
Query: 181 NMEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+M A VF + IVS +++I GY ++AL F +++R ++P +T ++
Sbjct: 327 DMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLI 386
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACA+ LE G + + F +P + +TL+DMY KCG + ++F E+++ D++
Sbjct: 387 KACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEI 446
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN +V S +G + A F + G++PN TFV LL GC+HAG+V++G +F+SM
Sbjct: 447 AWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSM 506
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+++ + P EHY C++DLLGR+G+L EA + I +MP EPN W + L C++H +
Sbjct: 507 EKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMER 566
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A+ ++L+ LEP NSG +VLLSNIY+ +W D +R M+ D + K+ G SWV++
Sbjct: 567 AKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRN 626
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
H F V D SHP ++IY KLD L ++K G+VP T+ VL D+++ K+ L HSE+
Sbjct: 627 KTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSER 686
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
+A+AF L+T I + KNLRVC DCH A+K ISK+T R IIVRD +RFH F GSCS
Sbjct: 687 IAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCS 746
Query: 600 CKDFW 604
C D+W
Sbjct: 747 CGDYW 751
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 203/405 (50%), Gaps = 7/405 (1%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T +++ AR + G + H+++++ G + F+ LNLY CG L +K+FD +
Sbjct: 77 TVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKM 136
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
+N+VSWT+II+G+ + +EA++ F ++ G F++ VL ACT LG +
Sbjct: 137 SQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGT 196
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+H V + G G +FV ++L D+Y+KCG + A + F++MP KD V W+SMI G+ NG
Sbjct: 197 QVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNG 256
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
K+AL + M +++ + + + LSAC++L A G + + + F +G
Sbjct: 257 DFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGN 316
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
L DMY+K G M A VF+ D +V A++ G ++ A F L + GI+
Sbjct: 317 ALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIE 376
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAH 389
PN TF L+ C + ++ G Q + + F P + +VD+ G+ G D +
Sbjct: 377 PNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS--STLVDMYGKCGLFDHSI 434
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEP 432
+L + P+ I W L+ H A N +I L+P
Sbjct: 435 QLFDEIE-NPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKP 478
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 147/292 (50%), Gaps = 7/292 (2%)
Query: 106 YINEGNLEEAINM--FRRLLHRGLK-PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK 162
++ EG +EE I+ + L G K D+ ++ ++ + +L+ K +H + G
Sbjct: 48 FVLEG-VEEIISFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGC 106
Query: 163 GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
N F++ ++LY+KCG ++ ++FD+M ++++VSW+S+I G+A N +EAL F
Sbjct: 107 LPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQ 166
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M+ E + + VL AC SLGA++ G + + F +G+ L DMY+KCG
Sbjct: 167 MRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGE 226
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
++ ACK F EM KD V+W +++ G NG K A + ++ + + + L
Sbjct: 227 LSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSA 286
Query: 343 CTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
C+ G+ ++ ++ F I + + D+ +SG + A + +
Sbjct: 287 CSALKASSFGKSLHATILKLGFEYETFIGN--ALTDMYSKSGDMVSASNVFQ 336
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/580 (41%), Positives = 353/580 (60%), Gaps = 4/580 (0%)
Query: 28 PTNF---TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA 84
P+ F + L+ C ++ + G H I+K G D F LLN+YV +L DA
Sbjct: 33 PSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDA 92
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
K+FD++P++N +S+ +I GY EAI +F RL HR + P+ F+ VL AC +
Sbjct: 93 SKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRL-HREVLPNQFTFASVLQACATM 151
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
L+ IH +V + G +VFV+ +L+D+YAKCG ME + +F + P ++ V+W+++I
Sbjct: 152 EGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVI 211
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G+ G ++AL +F NM ++ T L ACASL ALE G+ S + F
Sbjct: 212 VGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFD 271
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ V+ LIDMYAKCG + A VF M +D+V WNA++SG SM+G + A +F ++
Sbjct: 272 KDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKM 331
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
++ ++P+ TFVG+L C +AGL+D+G+ +F SM + + P IEHY CMV LLGR G
Sbjct: 332 QETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGH 391
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
LD+A +LI +P +P+ +VW ALL C +H +L +++ +EP + +VLLSN+
Sbjct: 392 LDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNM 451
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+ + +W++ A +R M KG++K G SW+E G VH F VGD SHP I L+ L
Sbjct: 452 YATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWL 511
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
K K AG++P + VL D+E+EEK+ L HSE+LAL+FG+I T IRI KNLR+C
Sbjct: 512 HMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRIC 571
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH AIK ISK+ REI+VRD NRFH F EG CSC D+W
Sbjct: 572 VDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 174/309 (56%), Gaps = 3/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+G+ + F AIE + + E LP FTF VL+ACA LG + H ++K G
Sbjct: 110 LIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIG 168
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D FV +L+++Y CG + +++++F + P +N V+W +I G++ G+ E+A+ +F
Sbjct: 169 LHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFL 228
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L ++ + L AC L L IH + +++ V +L+D+YAKCG
Sbjct: 229 NMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCG 288
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ AR VFD M ++D VSW++MI GY+ +G +EAL +F MQ +KP+ T VGVLS
Sbjct: 289 SIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLS 348
Query: 241 ACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACA+ G L+ G + +S ++ + T ++ + + G + +A K+ E+ + V
Sbjct: 349 ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSV 408
Query: 300 -VWNAVVSG 307
VW A++
Sbjct: 409 MVWRALLGA 417
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/602 (39%), Positives = 368/602 (61%), Gaps = 36/602 (5%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPD 93
+L+ C+ + + + H ++K GL DE + LL + G LA A VFD I
Sbjct: 24 LLQRCSNMEELR---QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
N W +I GY N EEA+ ++ +L+ + ++++ +L AC+ + L + I
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQI 140
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ---------------------- 191
H ++ + G G ++ SL+++Y+K G+++ AR +FDQ
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200
Query: 192 ---------MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
MPE++I+SW+SMI G G PKEAL++F+ MQ +K + +V L AC
Sbjct: 201 EMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQAC 260
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
A LG L+ G W ++++++E +P+LG LIDMYAKCG + +A +VFR+M++K VW
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
A++SG +++G + A F +++ G++PN TF G+L C+HAGLV E + F SM R+
Sbjct: 321 AMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERI 380
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
P IEHYGCMVDLLGR+G L EA ELI++MP++PNA +WGALL C +H +L +
Sbjct: 381 HGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQ 440
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
+ LI ++P + G Y+ L++I++A+ +WN AA++R M ++G+ K+ GCS + V+G H
Sbjct: 441 IGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAH 500
Query: 483 EFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
EFL GD SHP ++I L+++ +L+ G+ P +L D+E++EK+ + HSEKLA+
Sbjct: 501 EFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAV 560
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
FGLI+T P IRI KNLRVC DCH IKLISK+ REI++RD RFH F +G+C+C D
Sbjct: 561 TFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGD 620
Query: 603 FW 604
+W
Sbjct: 621 YW 622
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 181/350 (51%), Gaps = 33/350 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+ ++ + A+ Y+ M +TFPF+LKAC+ + + H+ I+K G
Sbjct: 89 MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMG 148
Query: 61 LDCDEFVKTSLLNL-------------------------------YVHCGYLADALKVFD 89
+ + SLLN+ Y CG + A ++F+
Sbjct: 149 FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFN 208
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+P++N++SWT++ISG + G +EA+N+F R+ G+K D+ ++V L AC LG L
Sbjct: 209 HMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQ 268
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
KWIH Y+ + + + L+D+YAKCG++E+A VF +M EK + W++MI GYA
Sbjct: 269 GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAI 328
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER-NEFLSNPV 268
+G +EAL+ F MQ ++P T G+L+AC+ G + MER + F +
Sbjct: 329 HGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIE 388
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
++D+ + G + +A ++ M K + +W A+++ ++G +++
Sbjct: 389 HYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELG 438
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 125/299 (41%), Gaps = 40/299 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G V + A+ ++ M+ G N L+ACA G H+ I K
Sbjct: 221 MISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHE 280
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D + L+++Y CG L +A++VF + +K V WTA+ISGY G EA+ F
Sbjct: 281 IEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFM 340
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++P+ + +LTAC+ G + AK +
Sbjct: 341 KMQTAGVEPNQMTFTGILTACSHAGLVHEAKLL--------------------------- 373
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
E R+ P I + M+ G KEA ++ NM +KP +L+
Sbjct: 374 -FESMERIHGFKP--SIEHYGCMVDLLGRAGLLKEAEELIENMP---VKPNAAIWGALLN 427
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM---YAKCGRMAQACKVFREMKDK 296
AC G LELG + +P G I + +A G QA +V R+MK++
Sbjct: 428 ACHIHGNLELGKQIGKIL----IQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQ 482
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 221/479 (46%), Positives = 328/479 (68%), Gaps = 1/479 (0%)
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
L+PD ++V ++ AC QLG+L K +H Y E G N+ V +++D+Y KC ++E A+
Sbjct: 7 LRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQ 66
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
VF+++ EKD++SW+SM+ G A +G+ +E+L +F MQ ++P+ T+VGVLSACA G
Sbjct: 67 EVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTG 126
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
AL+ G + +++ E + VL T L+DMYAKCG + A +VFR M+ ++ WNA++
Sbjct: 127 ALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIG 186
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
GL+M+G+ + A +F Q+E + P+ TF+ LLC C+HAGLVDEG F +M F +
Sbjct: 187 GLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIE 246
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
P +EHYGC+VDLL R+ ++D+A I++MP++ N+++W LL CR DLAE + +
Sbjct: 247 PRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRR 306
Query: 427 LIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLV 486
+I LEP + G YV+LSN+Y+ +W+ A K+R M +KGI+K GCSW+E++G++H+F+
Sbjct: 307 VIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVA 366
Query: 487 GDNSHPLSEKIYSKLDELATKLKA-AGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFG 545
GD SH +E+IY+ ++E+ ++ G VP T +VLFDIEEEEK++ L HSEKLA+A G
Sbjct: 367 GDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALG 426
Query: 546 LITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LI+T IRI KNLRVC DCH +K+ SK+ REI+ RD +RFH F EGSCSC DFW
Sbjct: 427 LISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 485
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 165/293 (56%), Gaps = 4/293 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P T ++ ACA+ + + G HS + GLD + V ++L++Y C + A +V
Sbjct: 9 PDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEV 68
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F+ I +K+V+SWT+++SG G +E++ +FR++ ++PD ++V VL+AC Q G L
Sbjct: 69 FNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGAL 128
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
K+IH +++ ++ + T+LVD+YAKCG+++ A +VF +M +++ +W++MI G
Sbjct: 129 DQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGL 188
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A +G ++A+ +F M+ + L P+ T + +L AC+ G ++ G+ M +N+F P
Sbjct: 189 AMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAM-KNKFQIEP 247
Query: 268 VLG--TTLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
+ ++D+ + ++ A M K + V+W ++ G+ +A
Sbjct: 248 RMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLA 300
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 110/202 (54%), Gaps = 2/202 (0%)
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
+NL+P+ TMV ++ ACA LG LE G S+ + N + ++DMY KC +
Sbjct: 5 DNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIES 64
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
A +VF +++KD + W +++SGL+ +GY + + +F +++ I+P+ T VG+L C
Sbjct: 65 AQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQ 124
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
G +D+G+ + + + F + + +VD+ + G +D A ++ + M + N W
Sbjct: 125 TGALDQGK-YIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWN 182
Query: 406 ALLAGCRLHKKTDLAEHVLNQL 427
A++ G +H + A + +Q+
Sbjct: 183 AMIGGLAMHGHGEDAISLFDQM 204
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 2/213 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G + FQ ++ + M+ P T VL ACA+ G H LI K
Sbjct: 83 MLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFE 142
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++CD ++T+L+++Y CG + AL+VF + +NV +W A+I G G+ E+AI++F
Sbjct: 143 INCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFD 202
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ L PD + + +L AC+ G + N+ + +VDL +
Sbjct: 203 QMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRA 262
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMIQGYASNG 211
++ A + MP K + V W++++ S G
Sbjct: 263 RKVDDALAFIENMPIKANSVLWATLLGACRSGG 295
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/607 (40%), Positives = 367/607 (60%), Gaps = 42/607 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRG +D Q+++ + MR P + F+F F+LKA A + G++ H +
Sbjct: 76 LIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVH 135
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD FV T+L+++Y CG++A A KVF+++ + NVV+W A+++ G+++ A MF
Sbjct: 136 GLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMF 195
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ R L W NV +A Y K
Sbjct: 196 NRMPFRNL----------------------TSW------------NVMLAG-----YTKA 216
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E AR++F +MP KD VSWS+MI G+A NGF EA F +Q+ ++P ++ G L
Sbjct: 217 GELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGAL 276
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACA GA+E G F+E++ FL + L+D Y+KCG + A VF M +K +
Sbjct: 277 SACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSI 336
Query: 300 V-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W ++++GL+M+GY + A +F ++E+ GI+P+G F+ +L C+HAGL+++G ++F
Sbjct: 337 VSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYK 396
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M ++++ P IEHYGCMVDL GR+GQLD+A+E I MP+ P AI+W LL C +H
Sbjct: 397 MKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVK 456
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
LAE V +L L+P NSG++VLLSNIY+ + KW D A +R M D+ + K G S +EVD
Sbjct: 457 LAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVD 516
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAG-FVPTTDHVLFDIEEEEKQYFLACHS 537
+++ F+ G+ + ++E+ Y KL E+ KL+ G ++P VL DIE+EEK+ ++ HS
Sbjct: 517 KIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHS 576
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EKLA+AFG+ +IRI KNLRVC DCH +KLISK+ G EI+VRD +RFH F GS
Sbjct: 577 EKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKTGS 636
Query: 598 CSCKDFW 604
CSC+D+W
Sbjct: 637 CSCRDYW 643
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 20/282 (7%)
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG---NMEKARRVFDQMP 193
+LT C L +L K +H YV + G + +A L+ L++ ++ ARR+F P
Sbjct: 11 LLTNCRSLKNL---KQVHAYVCKTGLDTDPIIAGKLL-LHSAVSVPDALDYARRLFLHFP 66
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP-EYYTMVGVLSACASLGALELGV 252
D+ +++I+G A + P+ +L F M+R P + ++ +L A AS +LE G+
Sbjct: 67 NPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGI 126
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ ++ +GTTL+ MY++CG +A A KVF EM + + V WNAVV+ G
Sbjct: 127 QLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCG 186
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
VK A +F ++ N ++ +L G T AG ++ R+ F M ++ +
Sbjct: 187 DVKGADMMFNRMP----FRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVS-----W 237
Query: 373 GCMVDLLGRSGQLDEAHELIKSMP---MEPNAIVWGALLAGC 411
M+ +G EA + + M PN + L+ C
Sbjct: 238 STMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSAC 279
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/563 (42%), Positives = 361/563 (64%), Gaps = 16/563 (2%)
Query: 53 HSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGN 111
H L +++GL D + ++LL++Y HC DA + FD+IPD N V TA+ SGY+
Sbjct: 116 HLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNL 175
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVR------VLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+ ++ +FR ++ DS S+V +A ++ D +H + + G RN
Sbjct: 176 VYHSLELFRAMI----ASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERN 231
Query: 166 VFVATSLVDLYAKCG--NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
V +++D YAK G ++E AR+VFD M E+D+VSW+SMI YA NG EA+ ++ M
Sbjct: 232 AGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKM 290
Query: 224 QR--ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
+K + VL ACA GA++ G + + R N +GT+++DMY+KCG
Sbjct: 291 LNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCG 350
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
R+ A + FR++K+K+ + W+A+++G M+G + A +F ++++ G++PN TF+ +L
Sbjct: 351 RVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLA 410
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C+HAGL+DEGR ++N+M + F + +EHYGCMVDLLGR+G LDEA+ LIK M ++P+A
Sbjct: 411 ACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDA 470
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMM 461
+WGALL+ CR+HK +LAE + +L L+ NSG YVLLSNIY+ + W D +IR ++
Sbjct: 471 AIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLV 530
Query: 462 GDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVL 521
+ I+K G S E+ G ++ F VGD SHP +IYS L++L +++ AG+VP T VL
Sbjct: 531 KTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVL 590
Query: 522 FDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGRE 581
D++EEEK+ L HSEKLA+AF L+ + P+ VI I KNLRVC DCH A+K I+KIT RE
Sbjct: 591 HDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITERE 650
Query: 582 IIVRDNNRFHCFIEGSCSCKDFW 604
II+RD RFH F +G CSC+D+W
Sbjct: 651 IIIRDLQRFHHFKDGLCSCRDYW 673
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 179/325 (55%), Gaps = 9/325 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
M G+V N+ H++E + +M + + A AR D + H+LI K
Sbjct: 166 MASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAK 225
Query: 59 AGLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
G + + V ++L+ Y G L A KVFD + +++VVSW ++I+ Y G EAI
Sbjct: 226 IGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAI 284
Query: 117 NMFRRLLH--RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
++ ++L+ G+K ++ ++ VL AC G + T K IH V G NV+V TS+VD
Sbjct: 285 GLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVD 344
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+Y+KCG +E A R F ++ EK+I+SWS+MI GY +G +EAL++F M+R L+P Y T
Sbjct: 345 MYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYIT 404
Query: 235 MVGVLSACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
+ VL+AC+ G L+ G W ++ + + ++D+ + G + +A + +EM
Sbjct: 405 FISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEM 464
Query: 294 KDK-DQVVWNAVVSGLSMNGYVKVA 317
K K D +W A++S ++ V++A
Sbjct: 465 KVKPDAAIWGALLSACRIHKNVELA 489
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/632 (39%), Positives = 367/632 (58%), Gaps = 28/632 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ ++ + MR EG +P V+ ACA+ I +
Sbjct: 230 MIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK 289
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + T+++++Y CG + A ++FD + +KNV+SW+A+I+ Y G +A+++FR
Sbjct: 290 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 349
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G+ PD ++ +L AC +L+ + +H + G +N+ VA LV Y+
Sbjct: 350 MMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYR 409
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNG-----------------------FP---- 213
++ A +FD M +D VSWS M+ G+A G P
Sbjct: 410 ALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGN 469
Query: 214 -KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
E+L +F M+ E + P+ MV V+ ACA LGA+ +++R +F + +LGT
Sbjct: 470 ANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTA 529
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
+IDM+AKCG + A ++F M++K+ + W+A+++ +G + A +F + + GI PN
Sbjct: 530 MIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPN 589
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
T V LL C+HAGLV+EG +FF+ M +S+ ++HY C+VDLLGR+G+LDEA +LI
Sbjct: 590 KITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLI 649
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
+SM +E + +WGA L CR HK LAE L+ L+P N G+Y+LLSNIY+ + +W
Sbjct: 650 ESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWE 709
Query: 453 DAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAG 512
D AK R +M + ++KI G +W+EVD H+F VGD +HP S++IY L L KL+ G
Sbjct: 710 DVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVG 769
Query: 513 FVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIK 572
+VP T+ VL D++EE K L HSEKLA+AFGLI T IRI KNLRVCGDCH K
Sbjct: 770 YVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCK 829
Query: 573 LISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
L+S ITGR IIVRD NRFH F EG+CSC D+W
Sbjct: 830 LVSAITGRVIIVRDANRFHHFKEGACSCGDYW 861
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 221/482 (45%), Gaps = 62/482 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GF + + + + G P N+T PFV++AC + Q+
Sbjct: 150 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM------------ 197
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+L+++YV C + DA +FD + ++++V+WT +I GY G E++ +F
Sbjct: 198 ---------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 248
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ PD ++V V+ AC +LG + A+ I Y+ +V + T+++D+YAKCG
Sbjct: 249 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 308
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E AR +FD+M EK+++SWS+MI Y +G ++ALD+F M + P+ T+ +L
Sbjct: 309 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 368
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC + L + + L N ++ L+ Y+ + A +F M +D V
Sbjct: 369 ACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVS 428
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF------------------------ 336
W+ +V G + G FG F +L +CG +P+ T
Sbjct: 429 WSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPD 488
Query: 337 ----VGLLCGCTHAGLVDEGRQFFNSMSR-VFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
V ++ C G + + R + + R F L ++ M+D+ + G ++ A E+
Sbjct: 489 KVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG--TAMIDMHAKCGCVESAREI 546
Query: 392 IKSMPMEPNAIVWGALLAGCRLH----KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
M E N I W A++A H K DL +L I L+S +Y+
Sbjct: 547 FDRME-EKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGIL-----PNKITLVSLLYAC 600
Query: 448 SH 449
SH
Sbjct: 601 SH 602
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 176/344 (51%), Gaps = 23/344 (6%)
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 126
V L+ Y + L DA +FD + ++ VSW+ ++ G+ G+ FR L+ G
Sbjct: 115 VANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCG 174
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
+PD++++ V+ AC L +L A LVD+Y KC +E AR
Sbjct: 175 ARPDNYTLPFVIRACRDLKNLQMA---------------------LVDMYVKCREIEDAR 213
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
+FD+M E+D+V+W+ MI GYA G E+L +F M+ E + P+ MV V+ ACA LG
Sbjct: 214 FLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLG 273
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
A+ +++R +F + +LGT +IDMYAKCG + A ++F M++K+ + W+A+++
Sbjct: 274 AMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIA 333
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
+G + A +F + G+ P+ T LL C + + + RQ ++ + V +
Sbjct: 334 AYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQ-VHAQASVHGML 392
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ +V LD+A+ L M + +++ W ++ G
Sbjct: 393 QNLIVANKLVHFYSYYRALDDAYGLFDGMCVR-DSVSWSVMVGG 435
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
IP + T +N N EE + F L + L P + ++A +L+
Sbjct: 45 IPIVESIIETQFRQTSLNLHNREEESSKFHFL--QRLNPKFY-----ISALVNCRNLTQV 97
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ +H + G N+ VA L+ Y+ ++ A +FD M +D VSWS M+ G+A
Sbjct: 98 RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 157
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G F + R +P+ YT+ V+ AC L L++
Sbjct: 158 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMA------------------- 198
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
L+DMY KC + A +F +M+++D V W ++ G + G + +F ++ + G+
Sbjct: 199 --LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 256
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-VFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
P+ V ++ C G + + R + + R F L ++ M+D+ + G ++ A
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG--TAMIDMYAKCGCVESAR 314
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLH 414
E+ M E N I W A++A H
Sbjct: 315 EIFDRME-EKNVISWSAMIAAYGYH 338
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/602 (39%), Positives = 364/602 (60%), Gaps = 1/602 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G V N + +E + M G T VL ACA + LG H VKA
Sbjct: 267 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKAC 326
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +LL++Y CG L A +VF + D +VSWT+II+ Y+ EG +AI +F
Sbjct: 327 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFD 386
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +G++PD +++ ++ AC L + +H YV + G G N+ V +L+++YAKCG
Sbjct: 387 EMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG 446
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E+AR VF ++P KDIVSW++MI GY+ N P EAL++F +MQ++ KP+ TM VL
Sbjct: 447 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLP 505
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA L AL+ G + R + S+ + L+DMYAKCG + A +F + KD +
Sbjct: 506 ACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLIS 565
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G M+G+ A F ++ GI+P+ ++F +L C+H+GL++EG +FFNSM
Sbjct: 566 WTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMR 625
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P +EHY C+VDLL R G L +A++ I+SMP++P+ +WG LL+GCR+H LA
Sbjct: 626 NECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLA 685
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V + LEP N+ YV+L+N+Y+ + KW + K+R M +G ++ GCSW+EV G
Sbjct: 686 EKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGK 745
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+ F+ G++ HP ++KI L +L +++ + +VL + ++ EK+ HSEK
Sbjct: 746 FNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKS 805
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFG++ P +R++KN RVCGDCHE K +SK T EI++RD+NRFH F +G CSC
Sbjct: 806 AMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSC 865
Query: 601 KD 602
+D
Sbjct: 866 RD 867
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 198/380 (52%), Gaps = 12/380 (3%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
VL+ CA + + G R HS+I+ G+ DE + L+ +YV+CG L K+FD I +
Sbjct: 100 VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 159
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
V W ++S Y GN E++++F+++ G+ + ++ VL LG + K +HG
Sbjct: 160 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 219
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
YV + G G N V SL+ Y K G +E A +FD++ E D+VSW+SMI G NGF
Sbjct: 220 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 279
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
L++F M ++ + T+V VL ACA++G L LG F + F V TL+D
Sbjct: 280 GLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 339
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MY+KCG + A +VF +M D V W ++++ G A G+F +++ G++P+ T
Sbjct: 340 MYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 399
Query: 336 FVGLLCGCTHAGLVDEGRQFF-----NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
++ C + +D+GR N M +T ++++ + G ++EA
Sbjct: 400 VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVT------NALINMYAKCGSVEEARL 453
Query: 391 LIKSMPMEPNAIVWGALLAG 410
+ +P++ + + W ++ G
Sbjct: 454 VFSKIPVK-DIVSWNTMIGG 472
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/461 (29%), Positives = 236/461 (51%), Gaps = 9/461 (1%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
F+ ++ + M+ G + +TF VLK A + R H ++K G + V S
Sbjct: 176 FRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNS 235
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ Y G + A +FD++ + +VVSW ++I+G + G + +F ++L G++ D
Sbjct: 236 LIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVD 295
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
++V VL AC +G+LS + +HG+ +A V + +L+D+Y+KCGN+ A VF
Sbjct: 296 LTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFV 355
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M + IVSW+S+I Y G +A+ +F MQ + ++P+ YT+ ++ ACA +L+
Sbjct: 356 KMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK 415
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G S++ +N SN + LI+MYAKCG + +A VF ++ KD V WN ++ G S
Sbjct: 416 GRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQ 475
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
N A +F ++K +P+ T +L C +D+GR+ + R + +
Sbjct: 476 NLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL-- 532
Query: 371 HYGC-MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL-- 427
H C +VD+ + G L A L +P + + I W ++AG +H + A N++
Sbjct: 533 HVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRI 591
Query: 428 IALEPWNSGNYVLLSNIYSASHKWNDAAK-IRSMMGDKGIQ 467
+EP S +L N S S N+ K SM + G++
Sbjct: 592 AGIEPDESSFSAIL-NACSHSGLLNEGWKFFNSMRNECGVE 631
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 146/317 (46%), Gaps = 18/317 (5%)
Query: 101 AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
A I+ + G+L AI + + L +S+ VL C + L K +H +
Sbjct: 66 AKINKFCEMGDLRNAIELLTKSKSYELGLNSY--CSVLQLCAEKKSLEDGKRVHSVIISN 123
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
G + + LV +Y CG++ + R++FD++ + W+ ++ YA G +E++ +F
Sbjct: 124 GISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLF 183
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
MQ+ + YT VL A+LG ++ ++ + F SN + +LI Y K
Sbjct: 184 KKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKF 243
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G + A +F E+ + D V WN++++G +NG+ +F Q+ G++ + T V +L
Sbjct: 244 GGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVL 303
Query: 341 CGCTHAGLVDEGRQFFN-------SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
C + G + GR S VFS T ++D+ + G L+ A E+
Sbjct: 304 VACANIGNLSLGRALHGFGVKACFSEEVVFSNT--------LLDMYSKCGNLNGATEVFV 355
Query: 394 SMPMEPNAIVWGALLAG 410
M + + W +++A
Sbjct: 356 KMG-DTTIVSWTSIIAA 371
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/606 (40%), Positives = 364/606 (60%), Gaps = 6/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G V N A++ ++ R+ + T T+ V+K CA L + HS ++K G
Sbjct: 277 LMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRG 336
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
V T+L++ Y G L +AL +F + +NVVSWTA+I+G I G++ A +F
Sbjct: 337 FHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALF 396
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ G+ P+ F+ +LTA S IH V + V T+L+ Y+K
Sbjct: 397 SRMREDGVAPNDFTYSTILTASVA----SLPPQIHAQVIKTNYECTSIVGTALLASYSKL 452
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
N E+A +F + +KD+VSWS+M+ YA G A ++F M LKP +T+ V+
Sbjct: 453 CNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVI 512
Query: 240 SACASLGA-LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
ACAS A ++LG + ++ + + L+ MYA+ G + A +F D+D
Sbjct: 513 DACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDL 572
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WN+++SG + +GY + A VF Q+E GI+ +G TF+ ++ GC HAGLV+EG+++F+S
Sbjct: 573 VSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDS 632
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M+R + +TP +EHY CMVDL R+G+LDEA LI+ M +VW LL C++HK +
Sbjct: 633 MARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVE 692
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L + +L++LEP++S YVLLSNIYSA+ KW + ++R +M K ++K GCSW+++
Sbjct: 693 LGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIK 752
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F+ D SHPLSE+IY+KL + TKLK G+ P T L ++ EE+K+ LA HSE
Sbjct: 753 NKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSE 812
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LALAFGLI T P + I KNLRVCGDCH IK++SKI REI++RD +RFH F G C
Sbjct: 813 RLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVC 872
Query: 599 SCKDFW 604
SC DFW
Sbjct: 873 SCGDFW 878
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 200/407 (49%), Gaps = 31/407 (7%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLD-CDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
VLK C D LG + H L ++ G D D V TSL+++Y+ + D KVF+ +P +
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKR 168
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
NVV+WT++++GYI +G L + + +F R+ G+ P+S + VL+ G + + +H
Sbjct: 169 NVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVH 228
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
+ G VFV SL+++YAKCG +E+AR VF M +D+VSW++++ G NG
Sbjct: 229 AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDL 288
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
EAL +F++ + T V+ CA++ L L S + + F S + T L+
Sbjct: 289 EALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALM 348
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
D Y+K G++ A +F M VV W A+++G NG V +A +F ++ + G+ PN
Sbjct: 349 DAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPND 408
Query: 334 NTFVGLLCGCT-------HAGLVDE--------GRQFFNSMSRV------FSLTPMIEH- 371
T+ +L HA ++ G S S++ S+ MI+
Sbjct: 409 FTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQK 468
Query: 372 ----YGCMVDLLGRSGQLDEAHELIKSMPM---EPNAIVWGALLAGC 411
+ M+ ++G D A + M M +PN +++ C
Sbjct: 469 DVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDAC 515
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 211/452 (46%), Gaps = 11/452 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G++ + +E + MR EG P + TF VL A + LG R H+ VK G
Sbjct: 176 LLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFG 235
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
FV SL+N+Y CG + +A VF + +++VSW +++G + G+ EA+ +F
Sbjct: 236 CCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFH 295
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ V+ C + L A+ +H V + G V T+L+D Y+K G
Sbjct: 296 DSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAG 355
Query: 181 NMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ A +F M +++VSW++MI G NG A +F M+ + + P +T +L
Sbjct: 356 QLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTIL 415
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+ AS+ +L + A + + ++GT L+ Y+K +A +F+ + KD V
Sbjct: 416 T--ASVASLPPQIHAQVI--KTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVV 471
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL--CGCTHAGLVDEGRQFFN 357
W+A+++ + G A +F ++ G++PN T ++ C AG VD GRQ F+
Sbjct: 472 SWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAG-VDLGRQ-FH 529
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
++S + +V + R G ++ A + I + + + W ++L+G H +
Sbjct: 530 AISIKHRCHDALCVSSALVSMYARKGSIESA-QCIFERQTDRDLVSWNSMLSGYAQHGYS 588
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
A V Q+ A E LS I +H
Sbjct: 589 QKALDVFRQMEA-EGIEMDGVTFLSVIMGCAH 619
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 6/228 (2%)
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACA 243
AR+ FD++P ++ + + + +A G +ALD F ++ R + +VGVL C
Sbjct: 57 ARQAFDEIPHRNTLDHA--LFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114
Query: 244 SLGALELGVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
S+ LG R V +GT+L+DMY K + KVF M ++ V W
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWT 174
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
++++G +G + +F ++ G+ PN TF +L G+VD GR+ ++ S
Sbjct: 175 SLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRR-VHAQSVK 233
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F + ++++ + G ++EA + M + + W L+AG
Sbjct: 234 FGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETR-DMVSWNTLMAG 280
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/577 (40%), Positives = 347/577 (60%), Gaps = 1/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT + + ACA+ + + H + + + D F+ SL++LY CG + +A KV
Sbjct: 49 PTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD + K++VSWT++I+GY EAI + +L KP+ F+ +L A D
Sbjct: 109 FDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
IH + +V+V ++L+D+YA+CG M+ A VFD++ K+ VSW+++I G+
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A G + AL +F MQR + ++T + S A +GALE G W + M ++
Sbjct: 229 ARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTA 288
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+G T++DMYAK G M A KVF + +KD V WN++++ + G K A F ++ K
Sbjct: 289 FVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS 348
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI N TF+ +L C+H GLV EG+ +F+ M + ++L P IEHY +VDLLGR+G L+
Sbjct: 349 GIYLNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNY 407
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A I MPMEP A VWGALLA CR+HK + + + + L+P +SG VLL NIY++
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYAS 467
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ W+ AA++R MM G++K CSWVE+ VH F+ D++HP +E+IY DE++ K
Sbjct: 468 TGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMK 527
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
++ G+VP D+VL ++E+E++ L HSEK+ALAF LI IRI KN+R+CGDC
Sbjct: 528 IRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDC 587
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A K ISK+ REI+VRD NRFH F GSCSC D+W
Sbjct: 588 HSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 163/317 (51%), Gaps = 1/317 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ ND AI M F P FTF +LKA D +G + H+L VK
Sbjct: 123 LIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCD 182
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++LL++Y CG + A VFD + KN VSW A+ISG+ +G+ E A+ +F
Sbjct: 183 WHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFA 242
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G + F+ + + +G L KW+H ++ ++ + FV +++D+YAK G
Sbjct: 243 EMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSG 302
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M AR+VF+++ KD+V+W+SM+ +A G KEA+ F M++ + T + +L+
Sbjct: 303 SMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILT 362
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK-VFREMKDKDQV 299
AC+ G ++ G ++ T++D+ + G + A +F+ +
Sbjct: 363 ACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAA 422
Query: 300 VWNAVVSGLSMNGYVKV 316
VW A+++ M+ KV
Sbjct: 423 VWGALLAACRMHKNAKV 439
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/674 (36%), Positives = 371/674 (55%), Gaps = 70/674 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F + F H + ++ + +P F P +K+CA G + H+ +G
Sbjct: 75 LIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASG 134
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI------------- 107
D V +SL ++Y+ C + DA K+FD +PD++VV W+A+I+GY
Sbjct: 135 FLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFG 194
Query: 108 ----------------------NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
N G +EA+ MFR +L +G PD ++ VL A L
Sbjct: 195 EMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLE 254
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI-------- 197
D+ +HGYV + G G + FV ++++D+Y KCG +++ RVFD++ E +I
Sbjct: 255 DVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLT 314
Query: 198 ---------------------------VSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
V+W+S+I + NG EAL++F +MQ ++P
Sbjct: 315 GLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEP 374
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
T+ ++ AC ++ AL G F R + +G+ LIDMYAKCGR+ A + F
Sbjct: 375 NAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCF 434
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+M + V WNAV+ G +M+G K +F + + G +P+ TF +L C GL +
Sbjct: 435 DKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTE 494
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
EG + +NSMS + P +EHY C+V LL R G+L+EA+ +IK MP EP+A VWGALL+
Sbjct: 495 EGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSS 554
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CR+H L E +L LEP N GNY+LLSNIY++ W++ +IR +M KG++K
Sbjct: 555 CRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNP 614
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
G SW+EV VH L GD SHP + I KLD+L ++K +G++P T+ VL D+EE++K+
Sbjct: 615 GYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKE 674
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L HSEKLA+ GL+ T+P +++ KNLR+C DCH IK+IS++ GREI VRD NRF
Sbjct: 675 QILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRF 734
Query: 591 HCFIEGSCSCKDFW 604
H F +G CSC DFW
Sbjct: 735 HHFKDGVCSCGDFW 748
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 167/355 (47%), Gaps = 39/355 (10%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD---ALKVFDDIPDKNVVSWTAIISGYI 107
++H+LI++ L D + TSLL+ Y + L+ +L + +P + S++++I +
Sbjct: 21 QAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFA 80
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
+ + F L L PD+F + + +C L L + +H + +G +
Sbjct: 81 RSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSI 140
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA------------------- 208
VA+SL +Y KC + AR++FD+MP++D+V WS+MI GY+
Sbjct: 141 VASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGG 200
Query: 209 ----------------SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
+NGF EA+ MF M + P+ T+ VL A L + +G
Sbjct: 201 VEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGA 260
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
++ + S+ + + ++DMY KCG + + +VF E+++ + NA ++GLS NG
Sbjct: 261 QVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNG 320
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
V A VF + + ++ N T+ ++ C+ G E + F M + + + P
Sbjct: 321 MVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM-QAYGVEP 374
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 19/261 (7%)
Query: 134 IVRVLTAC--TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR---RV 188
+ L+ C + LS A+ H + + + TSL+ YA ++ + +
Sbjct: 1 MFHALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTL 60
Query: 189 FDQMPEKDIVSWSSMIQGYA-SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
+P + S+SS+I +A S+ FP L F ++ L P+ + + + +CASL A
Sbjct: 61 SSHLPHPTLFSFSSLIHAFARSHHFP-HVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRA 119
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
L+ G +F + FL++ ++ ++L MY KC R+ A K+F M D+D VVW+A+++G
Sbjct: 120 LDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAG 179
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM-------- 359
S G V+ A +FG++ G++PN ++ G+L G + G DE F M
Sbjct: 180 YSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPD 239
Query: 360 -SRVFSLTPMIEHYGCMVDLL 379
S V + P + GC+ D++
Sbjct: 240 GSTVSCVLPAV---GCLEDVV 257
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/577 (40%), Positives = 347/577 (60%), Gaps = 1/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT + ++ ACA+ + HS + ++ L D F+ SL+++Y CG ++DA V
Sbjct: 60 PTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHV 119
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD IP ++VVSWT +I+GY EA+ + +L +P F+ L A G
Sbjct: 120 FDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGR 179
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ +H + +V+V ++L+D+YA+C M+ A RVFD + K+ VSW+++I G+
Sbjct: 180 GIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGF 239
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A G + L F MQR ++T V SA A +GALE G W + M ++
Sbjct: 240 ARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTA 299
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ T++ MYAK G M A KVF + +D V WN +++ + G K A F ++ K
Sbjct: 300 FVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKY 359
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GIQ N TF+ +L C+H GLV EG+Q+F+ M + +++ P I+HY VDLLGR+G L E
Sbjct: 360 GIQLNQITFLSVLTACSHGGLVKEGKQYFDMM-KDYNVEPEIDHYVSFVDLLGRAGLLKE 418
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A + MPMEP A VWGALL CR+HK + ++ + + L+P ++G VLL NIY++
Sbjct: 419 ALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYAS 478
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +W+DAA++R MM G++K CSWVE++ VH F+ D++HP SE+IY +E+ T+
Sbjct: 479 TGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTR 538
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
+K AG+VP TD+VL I+E+E++ L HSEK+ALAF LI IRI KN+R+CGDC
Sbjct: 539 IKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDC 598
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A + +S++ REI+VRD NRFH F GSCSC D+W
Sbjct: 599 HSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 166/317 (52%), Gaps = 1/317 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ ND A+ M F P+ FTF LKA +G + H+L VK
Sbjct: 134 LITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYN 193
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D +V ++LL++Y C + A++VFD + KN VSW A+I+G+ +G+ E + F
Sbjct: 194 LDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFA 253
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G F+ V +A ++G L +W+H ++ ++G+ FVA +++ +YAK G
Sbjct: 254 EMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSG 313
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M AR+VFD++ ++D+V+W++M+ +A G KEA+ F +++ ++ T + VL+
Sbjct: 314 SMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLT 373
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK-VFREMKDKDQV 299
AC+ G ++ G M+ + +D+ + G + +A VF+ +
Sbjct: 374 ACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAA 433
Query: 300 VWNAVVSGLSMNGYVKV 316
VW A++ M+ K+
Sbjct: 434 VWGALLGACRMHKNAKI 450
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/593 (41%), Positives = 351/593 (59%), Gaps = 44/593 (7%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ V+A +D D+ V L Y G L A+ + PD V +T+ I + + G
Sbjct: 44 HAAAVRASVDQDKAVAFRLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLH 103
Query: 113 EEAINMFRRLL--HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
A+ + +L GL P + ++ L AC G L+ + +HGY + +VAT
Sbjct: 104 RAALALLSEMLLSRHGLLPTAHTLSASLPAC---GCLAVGRALHGYAVKLALSGEPYVAT 160
Query: 171 SLVDLY--------------------------------AKCGNMEKARRVFDQMPEKDIV 198
+L+ +Y AK G ++ AR +FD +P KD+V
Sbjct: 161 ALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLV 220
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
W++M+ GY +G P EAL +F M R ++P+ ++V LSA A LG E G W SF+
Sbjct: 221 CWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFV 280
Query: 259 ----ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK---DKDQVVWNAVVSGLSMN 311
R N +GT L+DMY KCG + +A VFR++ D+D V WNA+++G +M+
Sbjct: 281 ANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMH 340
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G + A FGQL G+ P TF+G+L C+H+GLVDEGR F +M + + P +EH
Sbjct: 341 GRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEH 400
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
YGCMVDLLGR+G+++EA +L++SM +P+A +W +LL CRLHK L + V + L+
Sbjct: 401 YGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVGNG 460
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
NSG YVLLSN+Y+A+ KW + ++RSMM G+QK GCS VEV V EF+ GD SH
Sbjct: 461 LANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSH 520
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P S +IY+KL+E+ + +A G VP T+ VL D+++ K+ LA HSEKLALAFGLI+T P
Sbjct: 521 PRSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDAAKERALAVHSEKLALAFGLISTPP 580
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ I+I KNLR C DCH +KL+S+ TGR+I+ RD NRFH F++GSCSC D+W
Sbjct: 581 RTGIKIVKNLRACADCHAVLKLVSEATGRKIVFRDRNRFHHFVDGSCSCGDYW 633
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/639 (38%), Positives = 363/639 (56%), Gaps = 44/639 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F + + A+++ + + P+ + ++ AC R +LG R H+ +
Sbjct: 38 IIELFCQQNRLKEAVDYLHRIPQ----PSPRLYSTLIAACLRHRKLELGKRVHAHTKASN 93
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ L+++Y CG L DA +FD+IP K++ SW +ISGY N G +E+A +F
Sbjct: 94 FIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFD 153
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLG------DL--------------------------- 147
+ HR D+FS V++ G DL
Sbjct: 154 EMPHR----DNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAI 209
Query: 148 ---STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
K IHGY+ +G + V T+L+DLY KCG++ +AR +FDQM +KDIVSW++MI
Sbjct: 210 SSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMI 269
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
+G KE +F ++ ++P YT GVL+ACA L A ++G +M R +
Sbjct: 270 HRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYD 329
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ L+ +Y+KCG A +VF +M D V W +++ G + NG +A F L
Sbjct: 330 PFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESL 389
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ G +P+ TFVG+L CTHAGLVD G ++F+S+ L +HY C++DLL RSG+
Sbjct: 390 LRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGR 449
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
EA +I +MPM+P+ +W +LL GCR+H +LAE L LEP N Y+ LSNI
Sbjct: 450 FKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNI 509
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+ + W + K+R+ M ++GI K G SW+E+ VH FLVGD SHP I+ L EL
Sbjct: 510 YANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGEL 569
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
+ K+K G+V T+ VL D+EEE+K+ + HSEKLA+AFG+I+T+P I++ KNLR C
Sbjct: 570 SKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTC 629
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
DCH A+K ISKI R+IIVRD+NRFHCF++GSCSCKD+
Sbjct: 630 VDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/584 (41%), Positives = 350/584 (59%), Gaps = 35/584 (5%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ +V+ GLD D V L Y G L +L + D + +T+ I + + G
Sbjct: 44 HAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLH 103
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
+ + +L GL P + ++ L AC LS + +H Y + + +VAT+L
Sbjct: 104 LPGLALLSDMLSEGLLPTAHTLSASLPACR---GLSLGRALHAYAFKLALSGDSYVATAL 160
Query: 173 VDLY-------------------------------AKCGNMEKARRVFDQMPEKDIVSWS 201
+ +Y A G ++ ARR+FD +P KD + W+
Sbjct: 161 LSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWN 220
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+MI GY +G P EAL +F M R + +P+ T+V VLSA A LG +E G W S+++ +
Sbjct: 221 AMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNS 280
Query: 262 EFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ N + T L+DMY KCG + A VF + +KD VVWNA+++G +M+G + A +
Sbjct: 281 RCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEM 340
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F QL G+ P TF+GLL C+H+GLV+EGR FF SM + + P IEHYGCMVDLLG
Sbjct: 341 FVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLG 400
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
R+G ++EA L++S+ + P+A++W +LLA CRLHK L + + + L+A NSG Y+L
Sbjct: 401 RAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMYIL 460
Query: 441 LSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSK 500
LSNIY+A KW + A++RSMM GIQK GCS +E+D V+EF+ GD SHP +++IY+
Sbjct: 461 LSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAM 520
Query: 501 LDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKN 560
LD++ +K G VP T+ VL D++E K+ LA HSEKLA+AFGLI++ P I+I KN
Sbjct: 521 LDKMNALVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLAVAFGLISSRPGSTIKIVKN 580
Query: 561 LRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LR C DCH +KLISKIT R+I+ RD NRFH F++GSC+C D+W
Sbjct: 581 LRACSDCHAVLKLISKITSRKIVFRDRNRFHHFVDGSCTCGDYW 624
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 171/332 (51%), Gaps = 39/332 (11%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
+ + M +EG LPT T L AC LG H+ K L D +V T+LL++
Sbjct: 107 LALLSDMLSEGLLPTAHTLSASLPAC---RGLSLGRALHAYAFKLALSGDSYVATALLSM 163
Query: 75 YVHCGYLADALKVFDDIPDKNVVS-------------------------------WTAII 103
Y G A A +FD++PD +VVS W A+I
Sbjct: 164 YARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMI 223
Query: 104 SGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV-NEAGK 162
GY G EA+ +FRR+L +PD ++V VL+A QLG + + KW+H YV N
Sbjct: 224 DGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCV 283
Query: 163 GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
NV VAT+LVD+Y KCG++E A VF + KDIV W++MI GYA +G ++AL+MF
Sbjct: 284 QLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQ 343
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKC 280
++ + L P T +G+L+AC+ G +E G ME +E+ +P + ++D+ +
Sbjct: 344 LRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSME-HEYGIDPKIEHYGCMVDLLGRA 402
Query: 281 GRMAQACKVFREMK-DKDQVVWNAVVSGLSMN 311
G + +A + + + D V+W ++++ ++
Sbjct: 403 GLIEEAFHLVQSLTITPDAVMWVSLLAACRLH 434
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/670 (38%), Positives = 372/670 (55%), Gaps = 66/670 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ F+ A+ + M + G PT FTF VL +CA +G + HS +VK G
Sbjct: 116 MIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLG 175
Query: 61 LDCDEFVKTSLLNLYVHCG------------YLAD-------------------ALKVFD 89
V SLLN+Y CG L D AL +FD
Sbjct: 176 QSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFD 235
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLS 148
+ D ++VSW +II+GY ++G A+ F +L LKPD F++ VL+AC L
Sbjct: 236 QMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLK 295
Query: 149 TAKWIHGYVNEAG---------------------------------KGRNVFVATSLVDL 175
K IH ++ A NV TSL+D
Sbjct: 296 LGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDG 355
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y K G+++ AR +FD + +D+V+W++MI GYA NG +AL +F M RE KP YT+
Sbjct: 356 YFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTL 415
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM-K 294
VLS +SL +L+ G + R E +S+ +G LI MY++ G + A K+F +
Sbjct: 416 AAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICS 475
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+D + W +++ L+ +G A +F ++ + ++P+ T+VG+L CTH GLV++G+
Sbjct: 476 YRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKS 535
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+FN M V ++ P HY CM+DLLGR+G L+EA+ I++MP+EP+ + WG+LL+ CR+H
Sbjct: 536 YFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVH 595
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K DLA+ +L+ ++P NSG Y+ L+N SA KW DAAK+R M DK ++K +G SW
Sbjct: 596 KYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSW 655
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
V++ VH F V D HP + IY + ++ ++K GF+P T+ VL D+E+E K+ L
Sbjct: 656 VQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILR 715
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AF LI T +RI KNLRVC DCH AI+ IS + REIIVRD RFH F
Sbjct: 716 HHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFK 775
Query: 595 EGSCSCKDFW 604
+GSCSC+D+W
Sbjct: 776 DGSCSCQDYW 785
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 208/476 (43%), Gaps = 98/476 (20%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLD-CDEFVKTSLLNLYVHCGYLADA---------- 84
+L++ + D +G H+ I+K GL F+ +LLNLYV G +DA
Sbjct: 18 LLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLK 77
Query: 85 ---------------------LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
+VFD+IP + VSWT +I GY + G + A++ F R++
Sbjct: 78 TTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMV 137
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
G+ P F+ VL +C L K +H +V + G+ V VA SL+++YAKCG+
Sbjct: 138 SSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSV 197
Query: 184 KARRV-------------------------------FDQMPEKDIVSWSSMIQGYASNGF 212
A+ V FDQM + DIVSW+S+I GY G+
Sbjct: 198 MAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGY 257
Query: 213 PKEALDMF-YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
AL+ F + ++ +LKP+ +T+ VLSACA+ +L+LG + + R + +G
Sbjct: 258 DIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGN 317
Query: 272 TLIDMYAKCGRMAQACK---------------------------------VFREMKDKDQ 298
LI MYAK G + A + +F +K +D
Sbjct: 318 ALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDV 377
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W A++ G + NG + A +F + + G +PN T +L + +D G+Q
Sbjct: 378 VAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAV 437
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R+ ++ + ++ + RSG + +A ++ + + + W +++ H
Sbjct: 438 AIRLEEVSS-VSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQH 492
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/608 (40%), Positives = 370/608 (60%), Gaps = 9/608 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + A+ + +R + T +L AC DF GV HS +K G
Sbjct: 222 MISGYCQSGNAKEALTLSDGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY-INEGNLEEAINMF 119
L+ + FV L++LY G L D KVFD + ++++SW +II Y +NE L AI +F
Sbjct: 278 LESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR-AILLF 336
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG-RNVFVATSLVDLYAK 178
+ + ++PD +++ + + +QLG++ + + G+ G ++ + ++V +YAK
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMV 236
G ++ AR VF+ +P KD++SW+++I GYA NGF EA++M+ M+ E + T V
Sbjct: 397 LGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWV 456
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VL AC+ GAL G+ + +N + +GT+L DMY KCGR+ A +F ++
Sbjct: 457 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRV 516
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ V WN +++ +G+ + A +F ++ G++P+ TFV LL C+H+GLVDEG F
Sbjct: 517 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCF 576
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
M + +TP ++HYGCMVDL GR+GQL+ A IKSMP++P+A +WGALL+ CR+H
Sbjct: 577 EMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGN 636
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
DL + L +EP + G +VLLSN+Y+++ KW +IRS+ KG++K G S +E
Sbjct: 637 VDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSME 696
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
VD V F G+ +HP+ E++Y +L L KLK G+VP VL D+E++EK++ L H
Sbjct: 697 VDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSH 756
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SE+LA+AF LITT K IRI KNLRVCGDCH K ISKIT REIIVRD+NRFH F G
Sbjct: 757 SERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNG 816
Query: 597 SCSCKDFW 604
CSC D+W
Sbjct: 817 VCSCGDYW 824
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 224/418 (53%), Gaps = 26/418 (6%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M + G P TFP VLKAC D G + H L +K G D +V SL++LY G
Sbjct: 144 MLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGA 200
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP-DSFSIVRVLT 139
+ +A +FD++P +++ SW A+ISGY GN +EA+ L GL+ DS ++V +L+
Sbjct: 201 VVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALT-----LSDGLRAMDSVTVVSLLS 255
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
ACT+ GD + IH Y + G +FV+ L+DLYA+ G+++ ++VFD+M +D++S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLIS 315
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF-M 258
W+S+I+ Y N P A+ +F M+ ++P+ T++ + S + LG + F +
Sbjct: 316 WNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTL 375
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ FL + +G ++ MYAK G + A VF + +KD + WN ++SG + NG+ A
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAI 435
Query: 319 GVFGQLEKCG--IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR------VFSLTPMIE 370
++ +E+ G I N T+V +L C+ AG + +G + + + VF T
Sbjct: 436 EMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTS--- 492
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ D+ G+ G+LD+A L +P N++ W L+A H + A + +++
Sbjct: 493 ----LADMYGKCGRLDDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEML 545
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 165/345 (47%), Gaps = 9/345 (2%)
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR-LLHR 125
+ L+NLY + G +A A FD I +++V +W +ISGY G E I F +L
Sbjct: 88 ISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSS 147
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
GL+PD + VL AC + D IH + G +V+VA SL+ LY + G + A
Sbjct: 148 GLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNA 204
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
R +FD+MP +D+ SW++MI GY +G KEAL + ++ + T+V +LSAC
Sbjct: 205 RILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR----AMDSVTVVSLLSACTEA 260
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
G GV S+ ++ S + LID+YA+ G + KVF M +D + WN+++
Sbjct: 261 GDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSII 320
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
+N A +F ++ IQP+ T + L + G + R R
Sbjct: 321 KAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWF 380
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
I +V + + G +D A + +P + I W +++G
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NKDVISWNTIISG 424
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 26/280 (9%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
+L +AK +H + + +NV ++ LV+LY GN+ AR FD + +D+ +W+ MI
Sbjct: 66 NLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMIS 125
Query: 206 GYASNGFPKEALDMF-YNMQRENLKPEYYTMVGVLSACASLG--------ALELGVWASS 256
GY G+ E + F M L+P+Y T VL AC ++ AL+ G
Sbjct: 126 GYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHCLALKFG----- 180
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
F+ + + +LI +Y + G + A +F EM +D WNA++SG +G K
Sbjct: 181 ------FMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKE 234
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A + L + T V LL CT AG + G +S S L + ++
Sbjct: 235 ALTLSDGLRAM----DSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLI 289
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
DL G L + ++ M + + I W +++ L+++
Sbjct: 290 DLYAEFGSLKDCQKVFDRMYVR-DLISWNSIIKAYELNEQ 328
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/572 (42%), Positives = 366/572 (63%), Gaps = 5/572 (0%)
Query: 34 PFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD 93
P V+KAC D G + H L++K G + D FV SL+++Y G + DA K+FDD+P
Sbjct: 1 PPVVKACG---DLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
++ SW A+ISGY GN EA+++ + G+K D+ ++ VL C Q+GD+ + K I
Sbjct: 58 RDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLI 117
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
H YV + G +FV+ +L+++YAK G++ A++VF + KD+VSW+++I GYA NG
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLA 176
Query: 214 KEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
EA++++ M+ E + P T V +L A + +GAL+ G+ + +N S+ +GT
Sbjct: 177 SEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTC 236
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
LIDMY KCG++ A +F ++ K+ V WNA++S ++G + A +F +++ ++P+
Sbjct: 237 LIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPD 296
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
TFV LL C+H+GLV + + FN M + + P ++HYGCMVDL GR+G+L+ A I
Sbjct: 297 HITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFI 356
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
K MP++P+A WGALL CR+H +L +H +L ++ N G YVLLSNIY+ KW
Sbjct: 357 KKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWE 416
Query: 453 DAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAG 512
+RS+ D+G++K G S + ++ V F G+ +HP E+IY +L +L +K+K G
Sbjct: 417 GVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIG 476
Query: 513 FVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIK 572
+VP VL D+EE+EK++ L HSE+LA+A+G+I+T+PK IRI KNLRVCGDCH K
Sbjct: 477 YVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTK 536
Query: 573 LISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IS IT REIIVRD++RFH F G+CSC D+W
Sbjct: 537 FISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 169/321 (52%), Gaps = 6/321 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N A++ + MR EG T VL CA+ D G H ++K G
Sbjct: 66 MISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHG 125
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + FV +L+N+Y G L A KVF + K+VVSW +I+GY G EAI ++
Sbjct: 126 LEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYL 184
Query: 121 RL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ H + P+ + V +L A + +G L IHG V + +VFV T L+D+Y KC
Sbjct: 185 LMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKC 244
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ A +F Q+P K+ V W++MI Y +G ++AL++F M+ E +KP++ T V +L
Sbjct: 245 GKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLL 304
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DK 296
SAC+ G + W + ME E+ P L ++D++ + G + A ++M
Sbjct: 305 SACSHSGLVSDAQWCFNMMEE-EYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQP 363
Query: 297 DQVVWNAVVSGLSMNGYVKVA 317
D W A+++ ++G +++
Sbjct: 364 DASAWGALLNACRIHGNIELG 384
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 154/307 (50%), Gaps = 17/307 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMR-NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I G+ N AIE Y M +E +P T+ +L A + Q G+R H ++K
Sbjct: 166 LITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKN 225
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L D FV T L+++Y CG L DA+ +F +P KN V W A+IS Y G+ E+A+ +F
Sbjct: 226 CLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELF 285
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAK 178
R + +KPD + V +L+AC+ G +S A+W + E G ++ +VDL+ +
Sbjct: 286 REMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGR 345
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQRENLKPEYYT 234
G +E A +MP + D +W +++ +G K A + + + EN+ YY
Sbjct: 346 AGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVG--YYV 403
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFL-SNP----VLGTTLIDMYAKCGRMAQAC-K 288
++ + A++G E GV + R+ L NP ++ +D++ + C +
Sbjct: 404 LLSNIY--ANVGKWE-GVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEE 460
Query: 289 VFREMKD 295
++RE++D
Sbjct: 461 IYRELRD 467
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/606 (39%), Positives = 368/606 (60%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + N A++ + MR EG T +L C + D + H ++K G
Sbjct: 287 MISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHG 346
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV +L+N+Y G L DA K F + +VVSW +II+ Y + A F
Sbjct: 347 LEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFV 406
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-KGRNVFVATSLVDLYAKC 179
++ G +PD ++V + + Q D ++ +HG++ G +V + ++VD+YAK
Sbjct: 407 KMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKL 466
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGV 238
G ++ A +VF+ +P KD++SW+++I GYA NG EA++++ M+ + + P T V +
Sbjct: 467 GLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSI 526
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L A A +GAL+ G+ + + + + T LID+Y KCGR+ A +F ++ +
Sbjct: 527 LPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS 586
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WNA++S ++G+ + +FG++ G++P+ TFV LL C+H+G V+EG+ F
Sbjct: 587 VTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRL 646
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + + P ++HYGCMVDLLGR+G L+ A++ IK MP++P+A +WGALL CR+H +
Sbjct: 647 MQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 705
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L + ++L ++ N G YVLLSNIY+ KW K+RS+ ++G++K G S +EV+
Sbjct: 706 LGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVN 765
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
V F G+ SHP ++IY +L L K+K+ G++P VL D+EE+EK++ L HSE
Sbjct: 766 RKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSE 825
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LA+AFG+I+T PK IRI KNLRVCGDCH A K IS+IT REI+VRD+NRFH F +G C
Sbjct: 826 RLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGIC 885
Query: 599 SCKDFW 604
SC D+W
Sbjct: 886 SCGDYW 891
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 142/419 (33%), Positives = 223/419 (53%), Gaps = 12/419 (2%)
Query: 1 MIRGFVSNDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI +V N F AI FY + P +TFP VLKAC D G + H K
Sbjct: 188 MISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKL 244
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G + FV SL+++Y G+ A +FDD+P +++ SW A+ISG I GN +A+++
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+K + ++V +L C QLGD+STA IH YV + G ++FV+ +L+++YAK
Sbjct: 305 DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF 364
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+E AR+ F QM D+VSW+S+I Y N P A F MQ +P+ T+V +
Sbjct: 365 GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424
Query: 240 SACASLGALELGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
S A + F M R + + V+G ++DMYAK G + A KVF + KD
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDV 484
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+ WN +++G + NG A V+ +E+C I PN T+V +L H G + +G +
Sbjct: 485 ISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHG 544
Query: 358 SMSRVFSLTPMIEHY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
RV ++ + C++D+ G+ G+L +A L +P E +++ W A+++ +H
Sbjct: 545 ---RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIH 599
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/365 (32%), Positives = 193/365 (52%), Gaps = 17/365 (4%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+L+V AG F+ T L+NLY + G ++ + FD IP K+V +W ++IS Y++ G+
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHF 198
Query: 113 EEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
EAI F +LL ++PD ++ VL AC G L + IH + + G NVFVA S
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAAS 255
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
L+ +Y++ G AR +FD MP +D+ SW++MI G NG +ALD+ M+ E +K
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMN 315
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
+ T+V +L C LG + + ++ ++ + + LI+MYAK G + A K F+
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
+M D V WN++++ N A G F +++ G QP+ T V L A +V +
Sbjct: 376 QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL------ASIVAQ 429
Query: 352 GRQFFNSMS------RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
R NS S R L + +VD+ + G LD AH++ + +P++ + I W
Sbjct: 430 SRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVK-DVISWN 488
Query: 406 ALLAG 410
L+ G
Sbjct: 489 TLITG 493
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 176/377 (46%), Gaps = 36/377 (9%)
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
AK +H + AGK +++F++T LV+LYA G++ +R FDQ+P+KD+ +W+SMI Y
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 210 NGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASL-GALELGVWASSFMERNEFLSNP 267
NG EA+ FY + ++P++YT VL AC +L ++ WA F N
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKL----GFQWNV 250
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ +LI MY++ G A +F +M +D WNA++SGL NG A V ++
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH----YGCMVDLLGRSG 383
GI+ N T V +L C G + + ++ + +E ++++ + G
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAM-----LIHLYVIKHGLEFDLFVSNALINMYAKFG 365
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE--HVLNQLIALEPWNSGNYVLL 441
L++A + + M + + + W +++A + A V QL +P + V L
Sbjct: 366 NLEDARKAFQQMFIT-DVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQP-DLLTLVSL 423
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
++I + S ++ + + +G W+ D V+ +V +Y+KL
Sbjct: 424 ASIVAQSRDCKNSRSVHGFIMRRG--------WLMEDVVIGNAVV---------DMYAKL 466
Query: 502 DELATKLKAAGFVPTTD 518
L + K +P D
Sbjct: 467 GLLDSAHKVFEIIPVKD 483
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/574 (40%), Positives = 358/574 (62%), Gaps = 2/574 (0%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +L C + + G R H+ ++K ++ T L+ LY C L A VFD++
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
++NVVSWTA+ISGY G EA+++F ++L +P+ F+ VL++CT +
Sbjct: 73 ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IH ++ + ++FV +SL+D+YAK G + +AR VF+ +PE+D+VS +++I GYA G
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 192
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+EAL++F +QRE + Y T +L+A + L AL+ G S + R E VL +
Sbjct: 193 DEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNS 252
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQP 331
LIDMY+KCG + A K+F M + + WNA++ G S +G +F + E+ ++P
Sbjct: 253 LIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKP 312
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF-SLTPMIEHYGCMVDLLGRSGQLDEAHE 390
+ TF+ +L GC+H GL D+G + F+ M + IEHYGC++DLLGR+G+++EA E
Sbjct: 313 DSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFE 372
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
LIK MP EP A +WG+LL CR+H T++ E V +L+ +EP N+GNYV+LSN+Y+++ +
Sbjct: 373 LIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGR 432
Query: 451 WNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKA 510
W D +R +M +K + K G SW+E+D +H F D SHP E+++ K+ EL K K
Sbjct: 433 WEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKE 492
Query: 511 AGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEA 570
+G+VP VL+D++EE+K+ L HSEKLALAFGLI+T+ +R+ KNLR+C DCH
Sbjct: 493 SGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNF 552
Query: 571 IKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K +SK+ GR++ +RD NRFH G CSC D+W
Sbjct: 553 AKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 166/309 (53%), Gaps = 4/309 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ A+ + M P FTF VL +C F+LG + HS I K
Sbjct: 82 MISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRN 141
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +SLL++Y G + +A VF+ +P+++VVS TAIISGY G EEA+ +F
Sbjct: 142 YENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFC 201
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RL G+ + + +LTA + L L K +H +V V + SL+D+Y+KCG
Sbjct: 202 RLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCG 261
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVL 239
N+ AR++F+ MP + ++SW++M+ GY+ +G E + +F M+ EN +KP+ T + VL
Sbjct: 262 NLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVL 321
Query: 240 SACASLGALELGVWASSFMER--NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DK 296
S C+ G + G+ M +E + +ID+ + GR+ +A ++ ++M +
Sbjct: 322 SGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEP 381
Query: 297 DQVVWNAVV 305
+W +++
Sbjct: 382 TAAIWGSLL 390
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/604 (39%), Positives = 360/604 (59%), Gaps = 34/604 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR +++N + A+ + M + GF P ++T+P VLKAC+ + ++G++ H + K G
Sbjct: 104 MIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVG 163
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + FV L+ LY CG L +A V D++ K+VVSW ++++GY ++A+++ R
Sbjct: 164 LDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICR 223
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ KPD+ ++ +L A T + YV E
Sbjct: 224 EMDGVRQKPDACTMASLLPAVTNTSSENVL-----YVEE--------------------- 257
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+F + +K +VSW+ MI Y N P +++D++ M + ++P+ T VL
Sbjct: 258 -------MFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLR 310
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC L AL LG ++ER + N +L +LIDMYA+CG + A +VF MK +D
Sbjct: 311 ACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVAS 370
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++S M G A +F +++ G P+ FV +L C+H+GL++EG+ +F M+
Sbjct: 371 WTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMT 430
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ +TP+IEH+ C+VDLLGRSG++DEA+ +IK MPM+PN VWGALL+ CR++ D+
Sbjct: 431 DDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIG 490
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
++L+ L P SG YVLLSNIY+ + +W + IRS+M + I+K+ G S VE++
Sbjct: 491 ILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQ 550
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL GD HP S++IY +L L K+K G+VP TD L D+EEE+K+ LA HSEKL
Sbjct: 551 VHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKL 610
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+ F ++ T + IRI KNLRVCGDCH A KLISKI REI++RD NRFH F +G CSC
Sbjct: 611 AIVFAILNTQ-ESPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSC 669
Query: 601 KDFW 604
D+W
Sbjct: 670 GDYW 673
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 6/272 (2%)
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
Q D+ T K +H V N + L+ YA G AR VFD +PE++++ ++
Sbjct: 44 QYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNV 103
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
MI+ Y +N +AL +F +M P++YT VL AC+ L +G+ + +
Sbjct: 104 MIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVG 163
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
N +G LI +Y KCG + +A V EM+ KD V WN++V+G + N A +
Sbjct: 164 LDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICR 223
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
+++ +P+ T LL T+ E + M ++ + M+ + ++
Sbjct: 224 EMDGVRQKPDACTMASLLPAVTNTS--SENVLYVEEMFMNLEKKSLVS-WNVMISVYMKN 280
Query: 383 GQLDEAHELIKSM---PMEPNAIVWGALLAGC 411
++ +L M +EP+AI ++L C
Sbjct: 281 SMPGKSVDLYLQMGKCEVEPDAITCASVLRAC 312
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/553 (40%), Positives = 363/553 (65%), Gaps = 1/553 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ ++K+ D F+ L+++Y GY DA ++FD++P+K++VSW +++SG G L
Sbjct: 85 HARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYL 144
Query: 113 EEAINMFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+N F R+ G +P+ +++ V++AC +G L K +HG V + G V S
Sbjct: 145 GACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNS 204
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
L+++Y K G ++ A ++F++MP + +VSW+SM+ + NG+ ++ +D+F M+R + P+
Sbjct: 205 LINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPD 264
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
TMV +L AC G +++ R F ++ ++ T L+++YAK GR+ + +F
Sbjct: 265 QATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFE 324
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
E+KD+D++ W A+++G +++ + A +F + K G++ + TF LL C+H+GLV+E
Sbjct: 325 EIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEE 384
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G+++F MS V+ + P ++HY CMVDLLGRSG+L++A+ELIKSMPMEP++ VWGALL C
Sbjct: 385 GKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGAC 444
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
R++ +L + V QL++L+P + NY++LSNIYSA+ W DA+K+R++M ++ + + G
Sbjct: 445 RVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPG 504
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
CS++E +H F+VGD HP S++I++KL+EL K++ AG P T+ VL DI+EE K
Sbjct: 505 CSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVD 564
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
+ HSEKLA+AFGL+ T + I KNLR+CGDCH K S + R II+RD+ RFH
Sbjct: 565 MINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFH 624
Query: 592 CFIEGSCSCKDFW 604
F +G CSC+D+W
Sbjct: 625 HFADGLCSCRDYW 637
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 168/308 (54%), Gaps = 5/308 (1%)
Query: 21 MRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCG 79
MR E G P T V+ ACA G H ++VK G+ V SL+N+Y G
Sbjct: 154 MRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLG 213
Query: 80 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
+L A ++F+++P +++VSW +++ + + G E+ +++F + G+ PD ++V +L
Sbjct: 214 FLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLR 273
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
ACT G A+ IH Y++ G ++ +AT+L++LYAK G + + +F+++ ++D ++
Sbjct: 274 ACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIA 333
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W++M+ GYA + +EA+ +F M +E ++ ++ T +LSAC+ G +E G M
Sbjct: 334 WTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMS 393
Query: 260 RNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKV 316
+ P L + ++D+ + GR+ A ++ + M + VW A++ + G V++
Sbjct: 394 -EVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVEL 452
Query: 317 AFGVFGQL 324
V QL
Sbjct: 453 GKEVAEQL 460
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 151/284 (53%), Gaps = 8/284 (2%)
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
S+V +++CT + S IH V ++ + F+ LV +Y K G E A+R+FD+M
Sbjct: 67 SLVFAISSCTSV---SYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALELG 251
P KD+VSW+S++ G + G+ L+ F M+ E+ +P T++ V+SACA +GAL+ G
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + + +LI+MY K G + A ++F EM + V WN++V + N
Sbjct: 184 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 243
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIE 370
GY + +F +++ GI P+ T V LL CT GL + + R F+ +I
Sbjct: 244 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIA 303
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+++L + G+L+ + ++ + + + + I W A+LAG +H
Sbjct: 304 --TALLNLYAKLGRLNASEDIFEEIK-DRDRIAWTAMLAGYAVH 344
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/568 (40%), Positives = 350/568 (61%), Gaps = 1/568 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
++ ACAR H+ + + F+ SL++LY CG +ADA +VFD +P ++
Sbjct: 70 LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+ SWT++I+GY +EA+ + +L KP+ F+ +L A + IH
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ +V+V ++L+D+YA+CG M+ A VFDQ+ K+ VSW+++I G+A G +
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
L MF MQR + ++T V SA A +GALE G W + M ++ + +G T++D
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MYAK G M A KVF + KD V WN++++ + G + A F ++ KCG+ N T
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 369
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
F+ +L C+H GLV EG+Q+F+ M + ++L P I+HY +VDLLGR+G L++A I M
Sbjct: 370 FLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKM 428
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
PM+P A VWGALL CR+HK + + + + L+P ++G VLL NIY+++ +W+ AA
Sbjct: 429 PMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAA 488
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
++R MM G++K CSWVE++ VH F+ D++HP SE+IY K +E++ +++ AG+VP
Sbjct: 489 RVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVP 548
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
TD+VL ++E+E+Q L HSEK+ALAF LI IRI KN+R+CGDCH A + IS
Sbjct: 549 NTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYIS 608
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDF 603
K+ REI+VRD NRFH F GSCSC D+
Sbjct: 609 KVFKREIVVRDTNRFHHFSSGSCSCGDY 636
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 164/317 (51%), Gaps = 1/317 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ ND A+ M F P FTF +LKA +G + H+L VK
Sbjct: 136 LIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYD 195
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++LL++Y CG + A+ VFD + KN VSW A+I+G+ +G+ E + MF
Sbjct: 196 WHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFA 255
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G + F+ V +A +G L KW+H ++ ++G+ + FV +++D+YAK G
Sbjct: 256 EMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSG 315
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M AR+VFD++ +KD+V+W+SM+ +A G +EA+ F M++ + T + +L+
Sbjct: 316 SMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILT 375
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK-VFREMKDKDQV 299
AC+ G ++ G M+ T++D+ + G + A +F+
Sbjct: 376 ACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAA 435
Query: 300 VWNAVVSGLSMNGYVKV 316
VW A++ M+ K+
Sbjct: 436 VWGALLGSCRMHKNAKI 452
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/666 (37%), Positives = 361/666 (54%), Gaps = 77/666 (11%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
H+ ++ +R+ F P P K+C L H++ +GL D FV +SLL
Sbjct: 3 HSSSLHHFLRHVSFPPDPHLLPTAFKSCP---TLPLARALHAVAEVSGLARDPFVASSLL 59
Query: 73 NLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG---- 126
+ Y+ G +A +FD +P + VV W+A+++ + G+ E A + + G
Sbjct: 60 HAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEP 119
Query: 127 ---------------------------------LKPDSFSIVRVLTACTQLGDLSTAKWI 153
L+PD+ + L+A +G +S + +
Sbjct: 120 NVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQL 179
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI---------------- 197
HGY +AG + V T+L+D+Y KCG + RVFD+ D+
Sbjct: 180 HGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQV 239
Query: 198 -------------------VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
VSW+S++ NG EA++ F MQ + +P T+ V
Sbjct: 240 CEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCV 299
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L A A++ AL G A F R FL + + + L+DMYAKCGR+ A +F M ++
Sbjct: 300 LPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNV 359
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WNA++ G +M G A +F + KC +P+ TF LL CT AGL +EGR +F
Sbjct: 360 VSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKE 419
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + ++P +EHY CMV LLGR+G+LDEA++LI MP EP+A +WG+LL CR+H D
Sbjct: 420 MHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVD 479
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
LAE +L LEP N+GNYVLLSNIY++ W+ ++R MM D G++K +GCSW+E+
Sbjct: 480 LAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIK 539
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH L GD+SHP+ I K+++L +++ GFVP+TD VL D+EE+EK LA HSE
Sbjct: 540 NKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSE 599
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA+A GLI+T+P +R+ KNLR+CGDCHEA+K IS GREI VRD NRFH F G C
Sbjct: 600 KLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKC 659
Query: 599 SCKDFW 604
SC DFW
Sbjct: 660 SCGDFW 665
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 168/356 (47%), Gaps = 40/356 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G + + A+ +M EG L P L A +G + H VKA
Sbjct: 127 LVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKA 186
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP--------------------------- 92
G D V T+L+++Y CG A+ ++VFD+
Sbjct: 187 GCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLF 246
Query: 93 --------DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+ NVVSWT+I++ + G EA+ FR + +G +P+S +I VL A +
Sbjct: 247 KEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANV 306
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
L + H + G +V+V+++LVD+YAKCG ++ AR +FD M +++VSW++MI
Sbjct: 307 AALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMI 366
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GYA G A+ MF++M + KP+ T +L+AC G E G M NE+
Sbjct: 367 GGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMH-NEYG 425
Query: 265 SNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
+P + ++ + + G++ +A + +M + D +W +++ ++G V +A
Sbjct: 426 VSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLA 481
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/608 (39%), Positives = 361/608 (59%), Gaps = 10/608 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I +V C +E + M ++GF P ++ ++ AC +LG + HS+ ++ G
Sbjct: 217 LITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLG 276
Query: 61 LDCDEFVKTSLLNLYVHCGY---LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI- 116
L D V L+++Y + A KVF +P NV+SWTA+ISGY+ G E +
Sbjct: 277 LVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVM 336
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+FR +L+ ++P+ + +L AC L D + + IH +V + V +LV +Y
Sbjct: 337 ALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMY 396
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ G ME+AR+ FDQ+ E +I+S S ++ +N ++ + +T
Sbjct: 397 AESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDD------GVSTFTFA 450
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
+LSA AS+G L G + + F S+ + +L+ MYA+CG + AC+ F EMKD
Sbjct: 451 SLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDH 510
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ + W +++SGL+ +GY K A +F + G++PN T++ +L C+H GLV EG++ F
Sbjct: 511 NVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHF 570
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
SM + L P +EHY C+VDLL RSG ++EA + I MP + +A+VW LL+ CR +
Sbjct: 571 RSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGN 630
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
T++ E N +I LEP + YVLLSN+Y+ + W++ A+IRS+M DK + K G SW++
Sbjct: 631 TEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMD 690
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
V +HEF GD SHPL+ IY+KL L ++K G+VP T VL D+ EE K+ +L H
Sbjct: 691 VGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQH 750
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEK+A+AFGLITT+ +RI KNLRVC DCH AIK ISK TGREII+RD+NRFH +G
Sbjct: 751 SEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDG 810
Query: 597 SCSCKDFW 604
CSC ++W
Sbjct: 811 ICSCGEYW 818
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 194/381 (50%), Gaps = 19/381 (4%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAG-LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD- 93
+L + AR D +LG H ++++ LD D V SLL +Y CG + A +VFD +
Sbjct: 46 LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC--TQLGDLSTAK 151
+++VSWTA+ S G E++ + +L GL+P++F++ AC +L L+
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLA-GG 164
Query: 152 WIHGYVNEAGK-GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ G+V + G G +V V +L+D++A+ G++ A+RVFD + E+ V W+ +I Y
Sbjct: 165 VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQA 224
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G + +++F +M + +P+ Y+M ++SAC LG++ LG S R +S+ +
Sbjct: 225 GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVS 284
Query: 271 TTLIDMYAKCG---RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK-VAFGVFGQLEK 326
L+DMYAK M A KVF+ M + + W A++SG +G + +F ++
Sbjct: 285 CGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLN 344
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQFF-----NSMSRV----FSLTPMIEHYGCMVD 377
I+PN T+ LL C + D GRQ S++ V +L M GCM +
Sbjct: 345 ESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEE 404
Query: 378 LLGRSGQLDEAHELIKSMPME 398
QL E + L S +E
Sbjct: 405 ARKAFDQLYETNILSMSPDVE 425
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/577 (40%), Positives = 347/577 (60%), Gaps = 1/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT + ++ ACA+ + H+ + ++ L D F+ SL+++Y CG ++DA V
Sbjct: 58 PTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHV 117
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD +P ++VVSWT +I+GY EAI + +L +P+ F+ +L A G
Sbjct: 118 FDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGC 177
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
S + +H + +V+V ++L+D+YA+C M+ A VFD++ K+ VSW+++I G+
Sbjct: 178 SIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGF 237
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A + L F MQR ++T + SA A +GALE G W + + ++
Sbjct: 238 ARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTA 297
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+G T++ MYAK G M A KVF M +D V WN +++ L+ G K A F ++ KC
Sbjct: 298 FVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKC 357
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GIQ N TF+ +L C+H GLV EG+ +F+ M + +++ P I+HY VDLLGR+G L E
Sbjct: 358 GIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVDLLGRAGLLKE 416
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A + MPMEP A VWGALL CR+HK + ++ + + L+P ++G VLL NIY++
Sbjct: 417 ALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYAS 476
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ KWNDAA++R MM G++K CSWV+++ VH F+ D++HP S IY +E+ +
Sbjct: 477 TGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMR 536
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
+K AG+VP T HVL I E+E++ L HSEK+ALAF LI IRI KN+R+CGDC
Sbjct: 537 IKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDC 596
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A K +SK+ REI+VRD NRFH F EGSCSC D+W
Sbjct: 597 HSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 160/317 (50%), Gaps = 1/317 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N AI M F P FTF +LKA +G + H+L VK
Sbjct: 132 LIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYN 191
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D +V ++LL++Y C + A+ VFD + KN VSW A+I+G+ + + E + F
Sbjct: 192 WDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFA 251
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G F+ + +A ++G L +W+H ++ ++G+ FV +++ +YAK G
Sbjct: 252 EMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSG 311
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M AR+VFD+M ++D+V+W++M+ A G KEA+ F +++ ++ T + VL+
Sbjct: 312 SMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLT 371
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK-VFREMKDKDQV 299
AC+ G ++ G M+ + +D+ + G + +A VF+ +
Sbjct: 372 ACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAA 431
Query: 300 VWNAVVSGLSMNGYVKV 316
VW A++ M+ K+
Sbjct: 432 VWGALLGACRMHKNAKM 448
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/605 (40%), Positives = 357/605 (59%), Gaps = 8/605 (1%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
+R F +I Y SM G P F+FPF+LK+CA G + H + K G
Sbjct: 25 LRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGC 84
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS--WTAIISGYINEGNLEEAINMF 119
+ + FV T+L+++Y CG +ADA KVF++ P + +S + A+ISGY + +A MF
Sbjct: 85 ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMF 144
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
RR+ G+ DS +++ ++ CT L + +HG + G V V S + +Y KC
Sbjct: 145 RRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKC 204
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++E RR+FD+MP K +++W+++I GY+ NG + L+++ M+ + P+ +T+V VL
Sbjct: 205 GSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVL 264
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
S+CA LGA ++G +E N F+ N + I MYA+CG +A+A VF M K V
Sbjct: 265 SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV 324
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W A++ M+G ++ +F + K GI+P+G FV +L C+H+GL D+G + F +M
Sbjct: 325 SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 384
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R + L P EHY C+VDLLGR+G+LDEA E I+SMP+EP+ VWGALL C++HK D+
Sbjct: 385 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDM 444
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE ++I EP N G YVL+SNIYS S +IR MM ++ +K G S+VE G
Sbjct: 445 AELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG 504
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH FL GD SH +E+++ LDEL T + D EE HSE+
Sbjct: 505 RVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDR------GEEVSSTTREHSER 558
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFG++ + P I + KNLRVC DCH +K +SKI R+ +VRD +RFH F +G CS
Sbjct: 559 LAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCS 618
Query: 600 CKDFW 604
CKD+W
Sbjct: 619 CKDYW 623
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 195/405 (48%), Gaps = 12/405 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ +N A + M+ G + T ++ C LG H VK G
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + V S + +Y+ CG + ++FD++P K +++W A+ISGY G + + ++
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ PD F++V VL++C LG + V G NVFV+ + + +YA+CG
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCG 306
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ KAR VFD MP K +VSW++MI Y +G + L +F +M + ++P+ V VLS
Sbjct: 307 NLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLS 366
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G + G+ M+R L P + L+D+ + GR+ +A + M + D
Sbjct: 367 ACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG 426
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
VW A++ ++ V +A F ++ + +PN + L+ EG
Sbjct: 427 AVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRV 484
Query: 359 M--SRVFSLTP---MIEHYGCMVDLLG--RS-GQLDEAHELIKSM 395
M R F P +EH G + L RS Q +E H ++ +
Sbjct: 485 MMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 156/332 (46%), Gaps = 4/332 (1%)
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
W + + E+I+++R +L G PD+FS +L +C L + + +H +V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 159 EAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS--WSSMIQGYASNGFPKEA 216
+ G FV T+L+ +Y KCG + AR+VF++ P+ +S ++++I GY +N +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
MF M+ + + TM+G++ C L LG + S + + I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
Y KCG + ++F EM K + WNAV+SG S NG ++ Q++ G+ P+ T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
V +L C H G G + + P + + + R G L +A + MP
Sbjct: 261 VSVLSSCAHLGAKKIGHE-VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
++ + + W A++ +H ++ + + +I
Sbjct: 320 VK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMI 350
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/607 (39%), Positives = 358/607 (58%), Gaps = 4/607 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V N F A+ +++MR + P +FTFP KA +G + H+L VKAG
Sbjct: 79 LIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAG 138
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV S ++Y G +A K+FD++P++N+ +W A +S + EG ++A+ F
Sbjct: 139 QISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFI 198
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
H G +P+ + L AC L + +HG+V ++G +V VA L+D Y KC
Sbjct: 199 EFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCH 258
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + +F + + + VSW SMI Y N ++A +F ++E ++P + + VLS
Sbjct: 259 QVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLS 318
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA L LE+G + + + N +G+ L+DMY KCG + A + F EM +++ V
Sbjct: 319 ACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVT 378
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCG---IQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
WNA++ G + G +A +F ++ CG + PN TFV +L C+ AG V+ G + F
Sbjct: 379 WNAMIGGYAHQGQADMAVTLFDEM-TCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFE 437
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
SM + + P EHY C+VDLLGR+G +++A++ IK MP+ P VWGALL ++ K+
Sbjct: 438 SMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKS 497
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
+L + + L L+P +SGN+VLLSN+++A+ +W +A +R M D GI+K GCSW+
Sbjct: 498 ELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITA 557
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
VH F D SH + +I + L +L +++AAG++P T LFD+EEEEK + HS
Sbjct: 558 GNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHS 617
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EK+ALAFGLI+ IRI KNLR+CGDCH AIK IS I GREIIVRDNN FH F +
Sbjct: 618 EKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQ 677
Query: 598 CSCKDFW 604
CSC+D+W
Sbjct: 678 CSCRDYW 684
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 201/427 (47%), Gaps = 9/427 (2%)
Query: 47 QLGVRSHSLIVKAGLD--CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIIS 104
+LG +H+ I+K LD F+ L+N+Y A + P+++VV+WTA+I+
Sbjct: 23 RLGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIA 81
Query: 105 GYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR 164
G + G A+ F + ++P+ F+ A L K +H +AG+
Sbjct: 82 GSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQIS 141
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+VFV S D+Y+K G E+AR++FD+MPE++I +W++ + G +AL F +
Sbjct: 142 DVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFR 201
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
E +P T L+ACA L LG F+ ++ F ++ + LID Y KC ++
Sbjct: 202 HEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVG 261
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
+ +F + + V W +++ N + A VF + K GI+P +L C
Sbjct: 262 CSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACA 321
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
+++ G+ ++++ + I +VD+ G+ G +++A MP E N + W
Sbjct: 322 GLSVLEVGKS-VHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTW 379
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKW---NDAAKI-RSM 460
A++ G + D+A + +++ + NYV + SA + N +I SM
Sbjct: 380 NAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESM 439
Query: 461 MGDKGIQ 467
G GI+
Sbjct: 440 RGRYGIE 446
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/624 (40%), Positives = 370/624 (59%), Gaps = 47/624 (7%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P T +L ACA Q G + H V+ GL D FV +L+++Y C + +A KV
Sbjct: 232 PDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKV 291
Query: 88 FDDIPDKNVVSW-----------------------------------TAIISGYINEGNL 112
F+ I K+VVSW +A+I+GY +G+
Sbjct: 292 FEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHG 351
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV-------NEAGKGRN 165
EA+++FR++ GL+P+ ++ +L+ C +G L K H YV N K +
Sbjct: 352 FEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDD 411
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKD--IVSWSSMIQGYASNGFPKEALDMFYNM 223
+ V L+D+YAKC + AR +FD + KD +V+W+ MI GYA +G +AL +F +
Sbjct: 412 LLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQI 471
Query: 224 --QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV-LGTTLIDMYAKC 280
Q+ +LKP +T+ L ACA LG L LG ++ RNE S + +G LIDMY+K
Sbjct: 472 FKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKS 531
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G + A VF MK ++ V W ++++G M+G + A +F Q++K G +G TF+ +L
Sbjct: 532 GDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVL 591
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C+H+G+VD+G +F+ M + F +TP EHY CMVDLLGR+G+L+EA ELIK+M MEP
Sbjct: 592 YACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPT 651
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSM 460
A+VW ALL+ R+H +L E+ ++L L N G+Y LLSN+Y+ + +W D A+IRS+
Sbjct: 652 AVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSL 711
Query: 461 MGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHV 520
M GI+K GCSW++ F VGD SHP SE+IY+ L +L ++K G+VP T
Sbjct: 712 MKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFA 771
Query: 521 LFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGR 580
L D+++EEK L HSEKLA+A+G++TTAP IRI KNLR+CGDCH A+ IS I
Sbjct: 772 LHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDH 831
Query: 581 EIIVRDNNRFHCFIEGSCSCKDFW 604
EI++RD++RFH F +GSCSC+ +W
Sbjct: 832 EIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/501 (30%), Positives = 246/501 (49%), Gaps = 54/501 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR V + FY M+ G+LP ++TFPFVLKAC + G H+++ G
Sbjct: 98 LIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANG 157
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK---NVVSWTAIISGYINEGNLEEAIN 117
L + F+ S++ +Y CG L DA ++FD++ ++ ++VSW +I++ Y+ G A+
Sbjct: 158 LGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALR 217
Query: 118 M-FRRLLHRGLK--PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
+ FR H LK PD+ ++V +L AC + L K +HG+ G +VFV +LV
Sbjct: 218 IAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVS 277
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSM------------------------------- 203
+YAKC M +A +VF+ + +KD+VSW++M
Sbjct: 278 MYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVIT 337
Query: 204 ----IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
I GYA G EALD+F MQ L+P T+ +LS CAS+GAL G +++
Sbjct: 338 WSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVI 397
Query: 260 RNEFLSN-------PVLGTTLIDMYAKCGRMAQACKVFR--EMKDKDQVVWNAVVSGLSM 310
+N N ++ LIDMYAKC A +F E KDK+ V W ++ G +
Sbjct: 398 KNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQ 457
Query: 311 NGYVKVAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+G A +F Q+ +K ++PN T L C G + GRQ R + + +
Sbjct: 458 HGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEV 517
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ C++D+ +SG +D A + +M + N + W +L+ G +H + + A H+ +Q+
Sbjct: 518 LYVGNCLIDMYSKSGDIDAARAVFDNMKLR-NVVSWTSLMTGYGMHGRGEEALHLFDQMQ 576
Query: 429 ALEPWNSGNYVLLSNIYSASH 449
L G L +Y+ SH
Sbjct: 577 KLGFAVDG-ITFLVVLYACSH 596
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 194/413 (46%), Gaps = 56/413 (13%)
Query: 75 YVHCGYLADALKVFDD-IPDKNVVSW-TAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
Y+ CG A+A+ + IP + V W A+I + G L++ + + ++ G PD +
Sbjct: 69 YIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHY 128
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ VL AC ++ L +H V G G NVF+ S+V +Y +CG ++ A ++FD++
Sbjct: 129 TFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEV 188
Query: 193 PEK---DIVSWSSMIQGYASNGFPKEALDMFYNMQRE---NLKPEYYTMVGVLSACASLG 246
E+ DIVSW+S++ Y G + AL + + M L+P+ T+V +L ACAS+
Sbjct: 189 LERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVF 248
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
AL+ G F RN + + +G L+ MYAKC +M +A KVF +K KD V WNA+V+
Sbjct: 249 ALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVT 308
Query: 307 GLS------------------------------MNGYVKVAFG-----VFGQLEKCGIQP 331
G S + GY + G VF Q++ G++P
Sbjct: 309 GYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEP 368
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-VFSLT------PMIEHYGCMVDLLGRSGQ 384
N T LL GC G + G+Q + + + +L ++ G ++D+ +
Sbjct: 369 NVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNG-LIDMYAKCKS 427
Query: 385 LDEAHELIKSMP-MEPNAIVWGALLAGCRLHKKTD----LAEHVLNQLIALEP 432
A + S+ + N + W ++ G H + + L + Q +L+P
Sbjct: 428 YRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKP 480
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 5/211 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G+ + A++ + + + P FT L ACAR + +LG + H+ ++
Sbjct: 451 MIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALR 510
Query: 59 AGLDCDE-FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
+ + +V L+++Y G + A VFD++ +NVVSWT++++GY G EEA++
Sbjct: 511 NENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALH 570
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLY 176
+F ++ G D + + VL AC+ G + + H V G +VDL
Sbjct: 571 LFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLL 630
Query: 177 AKCGNMEKARRVFDQMP-EKDIVSWSSMIQG 206
+ G + +A + M E V W +++
Sbjct: 631 GRAGRLNEAMELIKNMSMEPTAVVWVALLSA 661
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/602 (39%), Positives = 367/602 (60%), Gaps = 36/602 (5%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPD 93
+L+ C+ + + + H ++K GL DE + LL + G LA A VFD I
Sbjct: 24 LLQRCSNMEELR---QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
N W +I GY N EEA+ ++ +L+ + ++++ +L AC+ + + I
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQI 140
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ---------------------- 191
H ++ + G G ++ SL+++Y+K G+++ AR +FDQ
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200
Query: 192 ---------MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
MPE++I+SW+SMI G G PKEAL++F+ MQ +K + +V L AC
Sbjct: 201 EMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQAC 260
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
A LG L+ G W ++++++E +P+LG LIDMYAKCG + +A +VFR+M++K VW
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
A++SG +++G + A F +++ G++PN TF G+L C+HAGLV E + F SM R+
Sbjct: 321 AMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERI 380
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
P IEHYGCMVDLLGR+G L EA ELI++MP++PNA +WGALL C +H +L +
Sbjct: 381 HGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQ 440
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
+ LI ++P + G Y+ L++I++A+ +WN AA++R M ++G+ K+ GCS + V+G H
Sbjct: 441 IGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAH 500
Query: 483 EFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
EFL GD SHP ++I L+++ +L+ G+ P +L D+E++EK+ + HSEKLA+
Sbjct: 501 EFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAV 560
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
FGLI+T P IRI KNLRVC DCH IKLISK+ REI++RD RFH F +G+C+C D
Sbjct: 561 TFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGD 620
Query: 603 FW 604
+W
Sbjct: 621 YW 622
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 181/350 (51%), Gaps = 33/350 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+ ++ + A+ Y+ M +TFPF+LKAC+ + + H+ I+K G
Sbjct: 89 MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMG 148
Query: 61 LDCDEFVKTSLLNL-------------------------------YVHCGYLADALKVFD 89
+ + SLLN+ Y CG + A ++F+
Sbjct: 149 FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFN 208
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+P++N++SWT++ISG + G +EA+N+F R+ G+K D+ ++V L AC LG L
Sbjct: 209 HMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQ 268
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
KWIH Y+ + + + L+D+YAKCG++E+A VF +M EK + W++MI GYA
Sbjct: 269 GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAI 328
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER-NEFLSNPV 268
+G +EAL+ F MQ ++P T G+L+AC+ G + MER + F +
Sbjct: 329 HGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIE 388
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
++D+ + G + +A ++ M K + +W A+++ ++G +++
Sbjct: 389 HYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELG 438
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 125/299 (41%), Gaps = 40/299 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G V + A+ ++ M+ G N L+ACA G H+ I K
Sbjct: 221 MISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHE 280
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D + L+++Y CG L +A++VF + +K V WTA+ISGY G EA+ F
Sbjct: 281 IEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFM 340
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++P+ + +LTAC+ G + AK +
Sbjct: 341 KMQTAGVEPNQMTFTGILTACSHAGLVHEAKLL--------------------------- 373
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
E R+ P I + M+ G KEA ++ NM +KP +L+
Sbjct: 374 -FESMERIHGFKP--SIEHYGCMVDLLGRAGLLKEAEELIENMP---VKPNAAIWGALLN 427
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM---YAKCGRMAQACKVFREMKDK 296
AC G LELG + +P G I + +A G QA +V R+MK++
Sbjct: 428 ACHIHGNLELGKQIGKIL----IQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQ 482
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/670 (36%), Positives = 368/670 (54%), Gaps = 66/670 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G F AI+ M +GF PT FT VL +CA +G + HS +VK G
Sbjct: 135 MVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG 194
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
L V S+LN+Y CG A VF+
Sbjct: 195 LGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFE 254
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLS 148
+PD+++VSW A+I+GY G +A+ +F R+LH + PD F+I VL+AC LG++
Sbjct: 255 SMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVR 314
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ----------------- 191
K +H Y+ N V +L+ YAK G++E ARR+ DQ
Sbjct: 315 IGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEG 374
Query: 192 ----------------MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
M +D+V+W++MI GY NG EA+D+F +M +P YT+
Sbjct: 375 YVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTL 434
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM-K 294
VLS CASL L+ G R+ + + +I MYA+ G A ++F ++
Sbjct: 435 AAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCW 494
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
K+ + W +++ L+ +G + A G+F ++ + G++P+ T+VG+L C+HAG V+EG++
Sbjct: 495 RKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKR 554
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+++ + + P + HY CMVDLL R+G EA E I+ MP+EP+AI WG+LL+ CR+H
Sbjct: 555 YYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH 614
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K +LAE +L++++P NSG Y ++N+YSA +W+DAA+I +K ++K G SW
Sbjct: 615 KNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSW 674
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+ +H F D HP + +Y+ + ++K AGFVP VL D+++E K+ L+
Sbjct: 675 THIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLS 734
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFGLI+T K +R+ KNLRVC DCH AIK ISK+T REIIVRD RFH F
Sbjct: 735 RHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFR 794
Query: 595 EGSCSCKDFW 604
+G CSCKD+W
Sbjct: 795 DGLCSCKDYW 804
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 187/434 (43%), Gaps = 68/434 (15%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F SLL+++ G LADA VF ++P+++ VSWT ++ G G EAI +
Sbjct: 99 FTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTAD 158
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G P F++ VL++C + + +H +V + G G V VA S++++Y KCG+ E A
Sbjct: 159 GFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETA 218
Query: 186 RRVFDQ-------------------------------MPEKDIVSWSSMIQGYASNGFPK 214
VF++ MP++ IVSW++MI GY NG
Sbjct: 219 TTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDA 278
Query: 215 EALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
+AL +F M E ++ P+ +T+ VLSACA+LG + +G +++ R E N + L
Sbjct: 279 KALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNAL 338
Query: 274 IDMYAKCGR---------------------------------MAQACKVFREMKDKDQVV 300
I YAK G M A ++F M ++D V
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVA 398
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ G NG A +F + CG +PN T +L C +D G+Q
Sbjct: 399 WTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAI 458
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R L ++ + RSG A + + I W +++ H + + A
Sbjct: 459 RSL-LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEA 517
Query: 421 EHVLNQLI--ALEP 432
+ +++ +EP
Sbjct: 518 VGLFEEMLRAGVEP 531
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 34/280 (12%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
RNVF SL+ ++AK G + AR VF +MPE+D VSW+ M+ G G EA+ +M
Sbjct: 96 RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC--- 280
+ P +T+ VLS+CA A +G SF+ + S + ++++MY KC
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDS 215
Query: 281 ----------------------------GRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
GRM A +F M D+ V WNA+++G + NG
Sbjct: 216 ETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNG 275
Query: 313 YVKVAFGVFGQ-LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
A +F + L + + P+ T +L C + G V G+Q + R + +
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRT-EMAYNSQV 334
Query: 372 YGCMVDLLGRSGQLDEAHELI-KSMPMEPNAIVWGALLAG 410
++ +SG ++ A ++ +SM + N I + ALL G
Sbjct: 335 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEG 374
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/622 (39%), Positives = 367/622 (59%), Gaps = 53/622 (8%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L ACA HS ++ G D FV +L++ Y CG + DA+KVF+ + K+
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324
Query: 96 VVSWTAIISGYINEGNL-----------------------------------EEAINMFR 120
VVSW A+++GY GN +EA++ F+
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY------------VNEAGKGRNVFV 168
+++ G +P+S +I+ +L+AC LG LS IH Y G G ++ V
Sbjct: 385 QMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMV 444
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNM--Q 224
+L+D+Y+KC + + AR +FD +P E+++V+W+ MI GYA G +AL +F M +
Sbjct: 445 YNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISK 504
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV--LGTTLIDMYAKCGR 282
+ P YT+ +L ACA L AL +G +++ R+ V + LIDMY+KCG
Sbjct: 505 PYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGD 564
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ A VF M +++V W +++SG M+G K A +F +++K G P+ +F+ LL
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
C+H+G+VD+G +F+ M R + + EHY C++DLL R G+LD+A + I+ MPMEP+A+
Sbjct: 625 CSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAV 684
Query: 403 VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMG 462
+W ALL+ CR+H +LAE+ LN+L+ ++ N G+Y L+SNIY+ + +W D A+IR +M
Sbjct: 685 IWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMK 744
Query: 463 DKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLF 522
GI+K GCSWV+ F VGD SHPLS +IYS L+ L ++K G+VP T+ L
Sbjct: 745 KSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALH 804
Query: 523 DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREI 582
D+++EEK L+ HSEKLALA+GL+TT+P IRI KNLRVCGDCH A ISKI EI
Sbjct: 805 DVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEI 864
Query: 583 IVRDNNRFHCFIEGSCSCKDFW 604
IVRD++RFH F GSCSC +W
Sbjct: 865 IVRDSSRFHHFKNGSCSCGGYW 886
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 227/488 (46%), Gaps = 62/488 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++R + AI M G P +FT P+ LKAC + G H LI G
Sbjct: 120 LVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNG 179
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK---NVVSWTAIISGYINEGNLEEAIN 117
+ + FV +L+ +Y CG L DA VFD+I K +V+SW +I++ ++ N A+
Sbjct: 180 FESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALE 239
Query: 118 MFRRL---LHRGL---KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+F + +H + D SIV +L AC L L K IH Y G + FV +
Sbjct: 240 LFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNA 299
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL--- 228
L+D YAKCG+M A +VF+ M KD+VSW++M+ GY +G A ++F NM++EN+
Sbjct: 300 LIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLD 359
Query: 229 --------------------------------KPEYYTMVGVLSACASLGALELGVWASS 256
+P T++ +LSACASLGAL G+ +
Sbjct: 360 VITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHA 419
Query: 257 FMERNEFLS------------NPVLGTTLIDMYAKCGRMAQACKVFREM--KDKDQVVWN 302
+ + LS + ++ LIDMY+KC A +F + ++++ V W
Sbjct: 420 YSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWT 479
Query: 303 AVVSGLSMNGYVKVAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
++ G + G A +F ++ + + PN T +L C H + G+Q ++
Sbjct: 480 VMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVT 539
Query: 361 RVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R P + C++D+ + G +D A + SMP + N + W ++++G +H +
Sbjct: 540 RHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSMMSGYGMHGRGKE 598
Query: 420 AEHVLNQL 427
A + +++
Sbjct: 599 ALDIFDKM 606
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 200/436 (45%), Gaps = 62/436 (14%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T ++ Y+ CG DAL V + + V W ++ +I EG+L+ AI + R+L G K
Sbjct: 87 TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
PD F++ L AC +L + +HG + G NVFV +LV +Y++CG++E A V
Sbjct: 147 PDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLV 206
Query: 189 FDQMPEK---DIVSWSSMIQGYASNGFPKEALDMFYNM------QRENLKPEYYTMVGVL 239
FD++ K D++SW+S++ + P+ AL++F M + N + + ++V +L
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNIL 266
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACASL AL S+ RN ++ + LID YAKCG M A KVF M+ KD V
Sbjct: 267 PACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVV 326
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEK---------------------C----------- 327
WNA+V+G + +G AF +F + K C
Sbjct: 327 SWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQM 386
Query: 328 ---GIQPNGNTFVGLLCGCTHAGLVDEGRQF--FNSMSRVFSLTPMIEH---------YG 373
G +PN T + LL C G + +G + ++ + SL Y
Sbjct: 387 ILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYN 446
Query: 374 CMVDLLGRSGQLDEAHELIKSMP-MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEP 432
++D+ + A + S+P E N + W ++ G + ++ A + +++I
Sbjct: 447 ALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMI---- 502
Query: 433 WNSGNYVLLSNIYSAS 448
S Y + N Y+ S
Sbjct: 503 --SKPYAVAPNAYTIS 516
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 119/239 (49%), Gaps = 15/239 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL--PTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G+ A++ ++ M ++ + P +T +L ACA ++G + H+ + +
Sbjct: 481 MIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTR 540
Query: 59 AGL--DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
FV L+++Y CG + A VFD +P +N VSWT+++SGY G +EA+
Sbjct: 541 HHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEAL 600
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS----L 172
++F ++ G PD S + +L AC+ G + Y + + +V + +
Sbjct: 601 DIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGL---NYFDIMRRDYDVVASAEHYACV 657
Query: 173 VDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQREN 227
+DL A+CG ++KA + +MP E V W +++ +++ + AL+ NM+ EN
Sbjct: 658 IDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAEN 716
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 115/268 (42%), Gaps = 21/268 (7%)
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
H YV+ G T +V Y CG + A V +++ V W+ +++ + G
Sbjct: 77 HSYVSPKSLG------TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHL 130
Query: 214 KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
A+ + M R KP+++T+ L AC L + G + N F SN + L
Sbjct: 131 DRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNAL 190
Query: 274 IDMYAKCGRMAQACKVFREMKDK---DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
+ MY++CG + A VF E+ K D + WN++V+ + A +F ++ +
Sbjct: 191 VAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHE 250
Query: 331 PNGN------TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC--MVDLLGRS 382
N + V +L C + + ++ + R + + + C ++D +
Sbjct: 251 KATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFA---DAFVCNALIDTYAKC 307
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAG 410
G +++A ++ M + + + W A++ G
Sbjct: 308 GSMNDAVKVFNVMEFK-DVVSWNAMVTG 334
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/608 (40%), Positives = 363/608 (59%), Gaps = 5/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N CF+ A++ YNSMR G +P+NF L +CA LG ++H +K G
Sbjct: 175 MITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLG 234
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG-NLEEAINMF 119
LD D V +LL LY LA+ KVF + +++ VSW +I + G ++ EAI +F
Sbjct: 235 LDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVF 294
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G P+ + + +L + L + IH + + + + +L+ Y K
Sbjct: 295 LEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKS 354
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G ME +F +M E+ D VSW+SMI GY N +A+D+ + M + + + +T V
Sbjct: 355 GEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATV 414
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
LSACA++ LE G+ + R S+ V+G+ L+DMY+KCGR+ A + F M ++
Sbjct: 415 LSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNL 474
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WN+++SG + +G+ A +F +++ G P+ TFVG+L C+H GLVDEG ++F S
Sbjct: 475 YSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKS 534
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLH-KK 416
M+ V+ L P +EHY CMVDLLGR+G+LD+ I MP++PN ++W +L A CR + +K
Sbjct: 535 MTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRK 594
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
T+L L ++P N+ NYVLLSN+Y++ KW D A+ R M + ++K GCSWV
Sbjct: 595 TELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVT 654
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
+ VH F+ GDNSHP IY+KL EL K++ AG+VP L+D+E E K+ L+ H
Sbjct: 655 MKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYH 714
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEKLA+AF ++T IRI KNLRVCGDCH A K ISK+ R I++RD+NRFH F +G
Sbjct: 715 SEKLAVAF-VLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDG 773
Query: 597 SCSCKDFW 604
CSC+D+W
Sbjct: 774 KCSCRDYW 781
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 190/361 (52%), Gaps = 4/361 (1%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H ++K G D D F+ +L+N+YV G A K+FD++PD+N V+W +ISGY G
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQ-LGDLSTAKWIHGYVNEAG-KGRNVFVAT 170
E+A + + ++ G P+ F+ + AC + + + +HGY G V V
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
L+++YAKCG+++ AR VF M +KD VSW+SMI G N ++A+ + +M++ L P
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ ++ LS+CASLG + LG + + + TL+ +YA+ R+A+ KVF
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVF 262
Query: 291 REMKDKDQVVWNAVVSGLSMNG-YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
M ++DQV WN V+ L+ +G V A VF ++ + G PN TF+ LL +
Sbjct: 263 SWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTS 322
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
Q +++ +++ ++ G+SG+++ E+ M + + W ++++
Sbjct: 323 KLSHQ-IHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 381
Query: 410 G 410
G
Sbjct: 382 G 382
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 203/431 (47%), Gaps = 6/431 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQL-GVRSHSLIVKA 59
+I G+ N + A M EGFLP F F ++AC ++ G + H ++
Sbjct: 72 LISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRT 131
Query: 60 GL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
GL D V L+N+Y CG + A VF + DK+ VSW ++I+G E+A+
Sbjct: 132 GLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKS 191
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ + GL P +F+++ L++C LG + + HG + G +V V+ +L+ LYA+
Sbjct: 192 YNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAE 251
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP-KEALDMFYNMQRENLKPEYYTMVG 237
+ + ++VF M E+D VSW+++I A +G EA+++F M R P T +
Sbjct: 252 TSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFIN 311
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD-K 296
+L+ +SL +L + + + + + L+ Y K G M ++F M + +
Sbjct: 312 LLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERR 371
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
D+V WN+++SG N + A + + + G + + TF +L C ++ G +
Sbjct: 372 DEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVH 431
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
R L + +VD+ + G++D A MP+ N W ++++G H
Sbjct: 432 ACAIRA-CLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMISGYARHGH 489
Query: 417 TDLAEHVLNQL 427
D A + ++
Sbjct: 490 GDNALRLFTRM 500
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
A H V + G ++F+ +L+++Y + G+ AR++FD+MP+++ V+W+ +I GY
Sbjct: 19 ANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQ 78
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA-SLGALELGVWASSFMERNEFLSNPV 268
NG P++A + M E P + + AC S+ G + R V
Sbjct: 79 NGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKV 138
Query: 269 -LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+G LI+MYAKCG + A VF M DKD V WN++++GL N + A + + K
Sbjct: 139 AVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT 198
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G+ P+ + L C G + G+Q ++ L + ++ L + +L E
Sbjct: 199 GLMPSNFALISALSSCASLGCILLGQQTHGEGIKL-GLDMDVSVSNTLLALYAETSRLAE 257
Query: 388 AHELIKSMPMEPNAIVWGALLAG 410
++ M +E + + W ++
Sbjct: 258 CQKVFSWM-LERDQVSWNTVIGA 279
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/637 (37%), Positives = 372/637 (58%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVK 58
+I G+ +++ YN M +N+G N TF +L ++ +LG + H +VK
Sbjct: 112 LISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVK 171
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV--------------------- 97
G FV + L+++Y G ++ A KVFD++P+KNVV
Sbjct: 172 FGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRL 231
Query: 98 ----------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
SWT++I+G+ G +AI++FR + L+ D ++ VLTAC + L
Sbjct: 232 FFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMAL 291
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
K +H Y+ N+FVA++LVD+Y KC N++ A VF +M K++VSW++M+ GY
Sbjct: 292 QEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGY 351
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
NG+ +EA+ F +MQ+ ++P+ +T+ V+S+CA+L +LE G + + +S
Sbjct: 352 GQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFI 411
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ L+ +Y KCG + + ++F E+ KD+V W A+VSG + G G+F +
Sbjct: 412 TVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAH 471
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++P+ TF+G+L C+ AGLV++G Q F SM + P+ +HY CM+DL R+G+++E
Sbjct: 472 GLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEE 531
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A I MP P+AI W LL+ CR + D+ + L+ L+P N+ +YVLLS++Y+A
Sbjct: 532 ARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAA 591
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
KW + A++R M DKG++K GCSW++ VH F D S+P S++IYS+L++L K
Sbjct: 592 KGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYK 651
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
+ G+VP + VL D+ + EK L HSEKLA+AFGL+ P IR+ KNLRVC DC
Sbjct: 652 MIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDC 711
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A K ISKIT REI+VRD RFH F +G+CSC DFW
Sbjct: 712 HNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 212/439 (48%), Gaps = 66/439 (15%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+LK C H+F HS I+K + F+ +L++ Y G + A KVFD +P N
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRG---------------------------LK 128
+ SW I+S Y G + E +F + R LK
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134
Query: 129 PD-SFSIVRV-----LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
D SF++ R+ L ++ G + + IHG+V + G VFV + LVD+Y+K G +
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMI 194
Query: 183 EKARRVFDQMPEKDIV-------------------------------SWSSMIQGYASNG 211
AR+VFD++PEK++V SW+SMI G+ NG
Sbjct: 195 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG 254
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
++A+D+F M+ ENL+ + YT VL+AC + AL+ G +++ R ++ N + +
Sbjct: 255 LDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVAS 314
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
L+DMY KC + A VF++M K+ V W A++ G NGY + A F ++K GI+P
Sbjct: 315 ALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEP 374
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ T ++ C + ++EG Q F++ + L I +V L G+ G ++++H L
Sbjct: 375 DDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHRL 433
Query: 392 IKSMPMEPNAIVWGALLAG 410
+ + + + W AL++G
Sbjct: 434 FNEISFK-DEVTWTALVSG 451
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/605 (38%), Positives = 357/605 (59%), Gaps = 2/605 (0%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
I G V++ A+E M++ G +P FT VLKACA F LG + H +VKA
Sbjct: 278 ISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVA 337
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
D DEFV L+++Y G+L DA KVFD +P ++++ W A+ISG ++G E +++F R
Sbjct: 338 DFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHR 397
Query: 122 LLHRGLKPD--SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ GL D ++ VL + + + +H + G + V L+D Y KC
Sbjct: 398 MRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKC 457
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ A +VF + DI+S ++M+ + ++A+ +F M R+ L+P+ + + +L
Sbjct: 458 GQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLL 517
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+AC SL A E G + + + +F S+ G L+ YAKCG + A F + ++ V
Sbjct: 518 NACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIV 577
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W+A++ GL+ +G+ K A +F ++ G+ PN T +L C HAGLVD+ +++F SM
Sbjct: 578 SWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESM 637
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
F + EHY CM+D+LGR+G+L++A EL+ +MP + NA VWGALL R+H+ +L
Sbjct: 638 KETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPEL 697
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+L LEP SG +VLL+N Y+++ W++ AK+R +M D ++K SWVE+
Sbjct: 698 GRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKD 757
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F+VGD SHP++ IY KL EL + AG+VP + L D++ EK+ L+ HSE+
Sbjct: 758 KVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSER 817
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AF LI+T IR+ KNLR+C DCH A K ISKI REII+RD NRFH F G+CS
Sbjct: 818 LAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCS 877
Query: 600 CKDFW 604
C D+W
Sbjct: 878 CGDYW 882
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 204/399 (51%), Gaps = 10/399 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ + +N + A+ + +MR G F P VLK CA D + G + H+L V
Sbjct: 74 LVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAP--DVRFGAQVHALAVATR 130
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDI----PDKNVVSWTAIISGYINEGNLEEAI 116
L D FV +L+ +Y G + +A ++FD+ ++N VSW +IS Y+ +AI
Sbjct: 131 LVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAI 190
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+FR ++ G +P+ F V+ ACT DL + +HG V G ++VF A +LVD+Y
Sbjct: 191 GVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMY 250
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+K G++E A VF++MP D+VSW++ I G ++G AL++ M+ L P +T+
Sbjct: 251 SKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLS 310
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VL ACA GA LG FM + + + L+DMYAK G + A KVF M +
Sbjct: 311 SVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRR 370
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG--IQPNGNTFVGLLCGCTHAGLVDEGRQ 354
D ++WNA++SG S +G +F ++ K G + N T +L + + RQ
Sbjct: 371 DLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQ 430
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
++++ L ++D + GQLD A ++ K
Sbjct: 431 -VHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFK 468
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 179/367 (48%), Gaps = 11/367 (2%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G HS ++K+GL LL LY C + A VFD+IPD VSW+++++ Y N
Sbjct: 23 GAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSN 80
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
G +A+ FR + RG+ + F++ VL D+ +H +VFV
Sbjct: 81 NGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAP---DVRFGAQVHALAVATRLVHDVFV 137
Query: 169 ATSLVDLYAKCGNMEKARRVFDQM----PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
A +LV +Y G +++ARR+FD+ E++ VSW++MI Y N +A+ +F M
Sbjct: 138 ANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMV 197
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
+P + V++AC LE G + R + + L+DMY+K G +
Sbjct: 198 WSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIE 257
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A VF +M D V WNA +SG +G+ A + Q++ G+ PN T +L C
Sbjct: 258 MAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACA 317
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
AG + GRQ M + + G +VD+ + G LD+A ++ MP + I+W
Sbjct: 318 GAGAFNLGRQIHGFMVKAVADFDEFVAVG-LVDMYAKHGFLDDARKVFDFMPRR-DLILW 375
Query: 405 GALLAGC 411
AL++GC
Sbjct: 376 NALISGC 382
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 123/260 (47%), Gaps = 9/260 (3%)
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
L+ LY++C AR VFD++P+ VSWSS++ Y++NG P++AL F M+ +
Sbjct: 43 LLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCN 102
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
+ + VL CA + G + + + + L+ +Y G + +A ++F
Sbjct: 103 EFALPVVLK-CAP--DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFD 159
Query: 292 EM----KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
E +++ V WN ++S N A GVF ++ G +PN F ++ CT +
Sbjct: 160 EYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSR 219
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
++ GRQ ++ R + +VD+ + G ++ A + + MP + + W A
Sbjct: 220 DLEAGRQVHGAVVRT-GYEKDVFTANALVDMYSKLGDIEMAATVFEKMP-AADVVSWNAF 277
Query: 408 LAGCRLHKKTDLAEHVLNQL 427
++GC H A +L Q+
Sbjct: 278 ISGCVTHGHDHRALELLLQM 297
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/534 (43%), Positives = 347/534 (64%), Gaps = 9/534 (1%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
++ Y G L++A ++F+++P ++V +WTA++SG++ G L+EA +F + + +
Sbjct: 252 MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----N 307
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S ++ Q + A+ + + RN ++V YA+CGN+++A+ +FD
Sbjct: 308 EVSWNAMIAGYVQSQQIEKARELFDQM----PSRNTSSWNTMVTGYAQCGNIDQAKILFD 363
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+MP++D +SW++MI GYA +G +EAL +F M+R+ + LS+CA + ALEL
Sbjct: 364 EMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALEL 423
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + + F + + G L+ MY KCG + +A VF ++ +KD V WN +++G +
Sbjct: 424 GKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYAR 483
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+G+ K A +F + K I+P+ T VG+L C+H GLVD+G ++FNSM + + +T +
Sbjct: 484 HGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAK 542
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
HY CM+DLLGR+G+LDEA L+KSMP P+A WGALL R+H T+L E ++ +
Sbjct: 543 HYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM 602
Query: 431 EPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNS 490
EP NSG YVLLSN+Y+AS +W + ++RS M DKG++K+ G SWVE+ H F VGD S
Sbjct: 603 EPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCS 662
Query: 491 HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTA 550
HP +E+IY+ L+EL +LK GFV +T VL D+EEEEK++ L HSEKLA+AFG+++
Sbjct: 663 HPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIP 722
Query: 551 PKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P IR+ KNLRVC DCH AIK ISKIT R+IIVRD+NRFH F EGSCSC D+W
Sbjct: 723 PGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 199/444 (44%), Gaps = 57/444 (12%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKA----CAREHDFQLGVRSHSLIV 57
I ++ + A+ +N MR + N L CAR+ +
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARK------------VF 114
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
+ D D +L+ YV G L+ A +F+ +P+K+VVSW A++SG+ G +EEA
Sbjct: 115 EKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK--------W--------IHGYVNEA- 160
+F ++L + + S +L+A Q G + A+ W + GYV +
Sbjct: 175 IFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKR 230
Query: 161 -GKGRNVFVATSLVDL---------YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
R++F + D YA+ G + +ARR+F+++P +D+ +W++M+ G+ N
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQN 290
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G EA +F M +N + G + + A EL RN N
Sbjct: 291 GMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKAREL---FDQMPSRNTSSWN---- 343
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
T++ YA+CG + QA +F EM +D + W A++SG + +G + A +F ++++ G
Sbjct: 344 -TMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
N + L C ++ G+Q + + T I ++ + G+ G ++EA +
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG-NALLAMYGKCGSIEEAFD 461
Query: 391 LIKSMPMEPNAIVWGALLAGCRLH 414
+ + + E + + W ++AG H
Sbjct: 462 VFEDIT-EKDIVSWNTMIAGYARH 484
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 167/363 (46%), Gaps = 53/363 (14%)
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
I D ++V W IS Y+ +G E A+++F G++ S + + G LS
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFN-----GMRRRSTVTYNAMIS----GYLSNN 105
Query: 151 KW-IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
K+ V E R++ ++ Y K GN+ AR +F+QMPEKD+VSW++M+ G+A
Sbjct: 106 KFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQ 165
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL-------------ELGVW--- 253
NGF +EA +F M +N + G+LSA G + E+ W
Sbjct: 166 NGFVEEARKIFDQMLVKN----EISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCL 221
Query: 254 ------------ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
A S +R + + + +I YA+ G +++A ++F E+ +D W
Sbjct: 222 MGGYVRKKRLDDARSLFDRMP-VRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAW 280
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
A+VSG NG + A +F ++ + N ++ ++ G + +++ R+ F+ M
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIEKARELFDQMP- 335
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+ + MV + G +D+A L MP + + I W A+++G +++ A
Sbjct: 336 ----SRNTSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAMISGYAQSGQSEEAL 390
Query: 422 HVL 424
H+
Sbjct: 391 HLF 393
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 114/232 (49%), Gaps = 6/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + A+ + M+ +G + L +CA +LG + H +VKAG
Sbjct: 376 MISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAG 435
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+LL +Y CG + +A VF+DI +K++VSW +I+GY G +EA+ +F
Sbjct: 436 FQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFE 495
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +KPD ++V VL+AC+ G + ++ + G N T ++DL +
Sbjct: 496 S-MKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRA 554
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
G +++A + MP D +W +++ +G ++A + + M+ +N
Sbjct: 555 GRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDN 606
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/435 (50%), Positives = 302/435 (69%), Gaps = 1/435 (0%)
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+L+ +A+ G + AR +FD+MPE++ VSWS+M+ GY G +EAL +F MQ + ++P
Sbjct: 164 TLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRP 223
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ +VGVL+ACA LGALE G W +++ N LGT L+DMYAKCG + +VF
Sbjct: 224 DDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVF 283
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
MKDK+ + W ++ GL+M+G + +F Q+E G++P+ F+G LC CTH GLVD
Sbjct: 284 EGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVD 343
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+GR+ FNSM + + P IEHYGCMVDLL R+G L EA ++++ MPM+P+A++WGAL+AG
Sbjct: 344 KGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAG 403
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CR HK +LAE+V+ I LEP SG YVLL NIYSAS + A +IR++M +KG++K
Sbjct: 404 CRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTP 463
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEEK 529
GCS VE+ GV+H+F+VGD SHP + I +K E+ ++++ G+VP VL DIEEEE
Sbjct: 464 GCSNVEIKGVIHQFIVGDLSHPRIKDILTKWYEIDSRIRLEEGYVPDKKEVLLDIEEEEM 523
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+ L+ HSEKLA+AF LI+T IRI KNLRVC DCH KLISK+ GREIIVRD R
Sbjct: 524 ESALSRHSEKLAIAFALISTEDYMPIRIVKNLRVCQDCHHVTKLISKVYGREIIVRDRTR 583
Query: 590 FHCFIEGSCSCKDFW 604
FH F +G+CSCKD+W
Sbjct: 584 FHLFKDGTCSCKDYW 598
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 186/355 (52%), Gaps = 38/355 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACA---------------REHD 45
+IR S+ Q A+ Y + G PT T P +LK+ A H
Sbjct: 59 LIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHAHA 118
Query: 46 FQLGVRSHSLI------VKAGL-----DCDEFVKTS----------LLNLYVHCGYLADA 84
+LG+ L+ V AGL D ++TS L+ + G +ADA
Sbjct: 119 VRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVADA 178
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+FD++P++N VSW+A+++GY+ G+ EA+ +F ++ +G++PD +V VL AC QL
Sbjct: 179 RSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQL 238
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
G L KW+HGY+ VF+ T+LVD+YAKCG ++ VF+ M +K++++W++MI
Sbjct: 239 GALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMI 298
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
+G A +G ++L +F M+ +KP+ +G L AC G ++ G + M N +
Sbjct: 299 KGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGI 358
Query: 265 SNPVLG-TTLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
+ ++D+ A+ G +++A + +M K D ++W A+++G + V++A
Sbjct: 359 KPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELA 413
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/670 (37%), Positives = 371/670 (55%), Gaps = 66/670 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + AI M EG P+ FT VL + A + G + HS IVK G
Sbjct: 117 MIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLG 176
Query: 61 LDCDEFVKTSLLNLYVHCG-------------------------------YLADALKVFD 89
L + V SLLN+Y CG + A+ F+
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFE 236
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLS 148
+ ++++V+W ++ISGY G A++MF ++L L PD F++ VL+AC L L
Sbjct: 237 QMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLC 296
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR--------------------- 187
+ IH ++ G + V +L+ +Y++CG +E ARR
Sbjct: 297 IGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG 356
Query: 188 ------------VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
+FD + ++D+V+W++MI GY +G EA+++F +M E +P YT+
Sbjct: 357 YIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTL 416
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK- 294
+LS +SL +L G ++ + + + LI MYAK G + A + F ++
Sbjct: 417 AAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRC 476
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
++D V W +++ L+ +G+ + A +F + G++P+ T+VG+ CTHAGLV++GRQ
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+F+ M V + P + HY CMVDL GR+G L EA E I+ MP+EP+ + WG+LL+ CR++
Sbjct: 537 YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVY 596
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K DL + +L+ LEP NSG Y L+N+YSA KW +AAKIR M D ++K +G SW
Sbjct: 597 KNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSW 656
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+EV VH F V D HP +IY + ++ ++K G+VP T VL D+EEE K+ L
Sbjct: 657 IEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILR 716
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFGLI+T K +RI KNLRVC DCH AIK ISK+ GREIIVRD RFH F
Sbjct: 717 HHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFK 776
Query: 595 EGSCSCKDFW 604
+G CSC+D+W
Sbjct: 777 DGFCSCRDYW 786
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 200/489 (40%), Gaps = 130/489 (26%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDD---------------------- 90
H ++K+GL ++ +L+N+Y GY A K+FD+
Sbjct: 37 HCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDM 96
Query: 91 ---------IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
+P ++ VSWT +I GY N G +AI + ++ G++P F++ VL +
Sbjct: 97 DSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASV 156
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD----------- 190
L T K +H ++ + G NV V+ SL+++YAKCG+ A+ VFD
Sbjct: 157 AATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWN 216
Query: 191 --------------------QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LK 229
QM E+DIV+W+SMI GY G+ ALDMF M R++ L
Sbjct: 217 AMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLS 276
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC--------- 280
P+ +T+ VLSACA+L L +G S + F + ++ LI MY++C
Sbjct: 277 PDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336
Query: 281 ------------------------GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
G M +A +F +KD+D V W A++ G +G
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGE 396
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF--------------------- 355
A +F + +PN T +L + + G+Q
Sbjct: 397 AINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALIT 456
Query: 356 -------FNSMSRVFSLTPM---IEHYGCMVDLLGRSGQLDEAHELIKSMPME---PNAI 402
S SR F L + M+ L + G +EA EL ++M ME P+ I
Sbjct: 457 MYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Query: 403 VWGALLAGC 411
+ + + C
Sbjct: 517 TYVGVFSAC 525
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/670 (36%), Positives = 368/670 (54%), Gaps = 66/670 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G F AI+ M +GF PT FT VL +CA +G + HS +VK G
Sbjct: 29 MVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG 88
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
L V S+LN+Y CG A VF+
Sbjct: 89 LGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFE 148
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLS 148
+PD+++VSW A+I+GY G +A+ +F R+LH + PD F+I VL+AC LG++
Sbjct: 149 SMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVR 208
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ----------------- 191
K +H Y+ N V +L+ YAK G++E ARR+ DQ
Sbjct: 209 IGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEG 268
Query: 192 ----------------MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
M +D+V+W++MI GY NG EA+D+F +M +P YT+
Sbjct: 269 YVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTL 328
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM-K 294
VLS CASL L+ G R+ + + +I MYA+ G A ++F ++
Sbjct: 329 AAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCW 388
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
K+ + W +++ L+ +G + A G+F ++ + G++P+ T+VG+L C+HAG V+EG++
Sbjct: 389 RKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKR 448
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+++ + + P + HY CMVDLL R+G EA E I+ MP+EP+AI WG+LL+ CR+H
Sbjct: 449 YYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH 508
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K +LAE +L++++P NSG Y ++N+YSA +W+DAA+I +K ++K G SW
Sbjct: 509 KNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSW 568
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+ +H F D HP + +Y+ + ++K AGFVP VL D+++E K+ L+
Sbjct: 569 THIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLS 628
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFGLI+T K +R+ KNLRVC DCH AIK ISK+T REIIVRD RFH F
Sbjct: 629 RHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFR 688
Query: 595 EGSCSCKDFW 604
+G CSCKD+W
Sbjct: 689 DGLCSCKDYW 698
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 182/426 (42%), Gaps = 68/426 (15%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
++ G LADA VF ++P+++ VSWT ++ G G EAI + G P F+
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ-- 191
+ VL++C + + +H +V + G G V VA S++++Y KCG+ E A VF++
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 192 -----------------------------MPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
MP++ IVSW++MI GY NG +AL +F
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 223 MQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
M E ++ P+ +T+ VLSACA+LG + +G +++ R E N + LI YAK G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 282 R---------------------------------MAQACKVFREMKDKDQVVWNAVVSGL 308
M A ++F M ++D V W A++ G
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
NG A +F + CG +PN T +L C +D G+Q R L
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL-LEQS 359
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
++ + RSG A + + I W +++ H + + A + +++
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419
Query: 429 --ALEP 432
+EP
Sbjct: 420 RAGVEP 425
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 222/553 (40%), Positives = 363/553 (65%), Gaps = 1/553 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ ++K+ D F+ L+++Y GY DA ++FD++P+K++VSW +++SG G L
Sbjct: 142 HARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYL 201
Query: 113 EEAINMFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+N F R+ G +P+ +++ V++AC +G L K +HG V + G V S
Sbjct: 202 GACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNS 261
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
L+++Y K G ++ A ++F++MP + +VSW+SM+ + NG+ ++ +D+F M+R + P+
Sbjct: 262 LINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPD 321
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
TMV +L AC G +++ R F ++ ++ T L+++YAK GR+ + +F
Sbjct: 322 QATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFE 381
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
E+KD+D++ W A+++G +++ + A +F + K G++ + TF LL C+H+GLV+E
Sbjct: 382 EIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEE 441
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G+++F MS V+ + P ++HY CMVDLLGRSG+L++A+ELIKSMPMEP++ VWGALL C
Sbjct: 442 GKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGAC 501
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
R++ +L + V QL++L+P + NY++LSNIYSA+ W DA+K+R++M ++ + + G
Sbjct: 502 RVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPG 561
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
CS++E +H F+VGD HP S++I++KL+EL K++ AG P T+ VL DI+EE K
Sbjct: 562 CSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVD 621
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
+ HSEKLA+AFGL+ T + I KNLR+CGDCH K S + R II+RD+ RFH
Sbjct: 622 MINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFH 681
Query: 592 CFIEGSCSCKDFW 604
F +G CSC+D+W
Sbjct: 682 HFADGLCSCRDYW 694
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 168/308 (54%), Gaps = 5/308 (1%)
Query: 21 MRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCG 79
MR E G P T V+ ACA G H ++VK G+ V SL+N+Y G
Sbjct: 211 MRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLG 270
Query: 80 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
+L A ++F+++P +++VSW +++ + + G E+ +++F + G+ PD ++V +L
Sbjct: 271 FLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLR 330
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
ACT G A+ IH Y++ G ++ +AT+L++LYAK G + + +F+++ ++D ++
Sbjct: 331 ACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIA 390
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W++M+ GYA + +EA+ +F M +E ++ ++ T +LSAC+ G +E G M
Sbjct: 391 WTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMS 450
Query: 260 RNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKV 316
+ P L + ++D+ + GR+ A ++ + M + VW A++ + G V++
Sbjct: 451 -EVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVEL 509
Query: 317 AFGVFGQL 324
V QL
Sbjct: 510 GKEVAEQL 517
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 151/284 (53%), Gaps = 8/284 (2%)
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
S+V +++CT + S IH V ++ + F+ LV +Y K G E A+R+FD+M
Sbjct: 124 SLVFAISSCTSV---SYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 180
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALELG 251
P KD+VSW+S++ G + G+ L+ F M+ E+ +P T++ V+SACA +GAL+ G
Sbjct: 181 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 240
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + + +LI+MY K G + A ++F EM + V WN++V + N
Sbjct: 241 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 300
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIE 370
GY + +F +++ GI P+ T V LL CT GL + + R F+ +I
Sbjct: 301 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIA 360
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+++L + G+L+ + ++ + + + + I W A+LAG +H
Sbjct: 361 --TALLNLYAKLGRLNASEDIFEEIK-DRDRIAWTAMLAGYAVH 401
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/609 (39%), Positives = 361/609 (59%), Gaps = 47/609 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ S + AI Y M G P ++TFPFVL C + F G++ H +VK G
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMG 161
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D F++ L++ Y CG++ KVF+ + ++NVVSWT++I GY +EA+++F
Sbjct: 162 LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFF 221
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L N + +LVD+Y KCG
Sbjct: 222 EML-----------------------------------------NKVMVNALVDMYMKCG 240
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+R+FD+ ++++V +++++ YA G +EAL + M ++ +P+ TM+ +S
Sbjct: 241 AIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAIS 300
Query: 241 ACASL-----GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
A A L G + G W +++E+N + L T L+DM+A+CG A +VF +M +
Sbjct: 301 ASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTE 360
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+D W A + ++M G + A G+F Q+ G++P+ FV +L C+H G V++G
Sbjct: 361 RDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHI 420
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F+ M ++P IEHYGCMVDLLGR+G L EA +LIKSMPMEPN +VWG+LLA CR+HK
Sbjct: 421 FSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHK 479
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
++A + ++ L P +G +VLLSNIY+++ KW D A++R + +KG++K+ G S V
Sbjct: 480 NVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSV 539
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
+V+GV+HEF GD SHP I L E+ + AG +P +VL D++E+EK+Y L+
Sbjct: 540 QVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSR 599
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+AFGLI T IR+ KNLR+C DCH K+ S I REIIVRDNNRFH F +
Sbjct: 600 HSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQ 659
Query: 596 GSCSCKDFW 604
G CSC D+W
Sbjct: 660 GLCSCCDYW 668
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 190/436 (43%), Gaps = 73/436 (16%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCG------YLADALKVF--DDIPDKNVVSWTAIIS 104
H I K GLD T L+N Y A ++F D D + ++I
Sbjct: 45 HCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSLIR 104
Query: 105 GYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR 164
GY + G EAI ++ R+L G+ P+ ++ VL+ CT++ +HG V + G
Sbjct: 105 GYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEE 164
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+VF+ L+ YA+CG+M+ +VF+ M E+++VSW+S+I GYA PKEA+ +F+ M
Sbjct: 165 DVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEML 224
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
N V+ L+DMY KCG +
Sbjct: 225 -----------------------------------------NKVMVNALVDMYMKCGAID 243
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A ++F E D++ V++N ++S + G + A + ++ + G +P+ T + +
Sbjct: 244 AAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISA-- 301
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYG---------CMVDLLGRSGQLDEAHELIKSM 395
A LVD F+ + + + IE G +VD+ R G A ++ M
Sbjct: 302 SAQLVD---LFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKM 358
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYVLLSNIYSA-SH--K 450
E + W A + + + A + NQ++ ++P + VL + +A SH +
Sbjct: 359 T-ERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKP----DVVLFVQVLTACSHGGQ 413
Query: 451 WNDAAKIRSMMGDKGI 466
I S+M D GI
Sbjct: 414 VEQGLHIFSLMEDHGI 429
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/639 (38%), Positives = 375/639 (58%), Gaps = 67/639 (10%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLK---ACAREHDFQLGVRSHSLIVKAGL-DCDEFVKTSLL 72
+ MR G P FTF F+ K + +R H L H+ ++ L FV SL+
Sbjct: 90 LFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLI 149
Query: 73 NLYVHCGYLADALKVFDDI-------------------------------PDKNVVSWTA 101
++Y+ G ADA + FD+I P ++V+SWT+
Sbjct: 150 HMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTS 209
Query: 102 IISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG 161
+I+ Y EA+ F+ +L G+ PD +++ VL+AC +L DL + +H V E G
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269
Query: 162 KGRNVFVATSLVDLYAKCGN--------------------------------MEKARRVF 189
+ + +L+D+YAKCG+ ++ AR +F
Sbjct: 270 MPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLF 329
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D+M +DI++++SM+ GY +G +EAL +F +M+R +L+ + +T+V +L+ACASLGAL+
Sbjct: 330 DEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQ 389
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + +E+ ++ LGT L+DMY KCGR+ +A VF+ M +D W A+++GL+
Sbjct: 390 QGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLA 449
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
NG K A F Q+ G QPN +++ +L C+H+ L++EGR +F+ M ++++ P I
Sbjct: 450 FNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQI 509
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
EHYGCM+DLLGRSG LDEA +L+K+MP++PNA++W ++L+ CR+HK DLA+ L+
Sbjct: 510 EHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLK 569
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
LEP G YV L NIY S +W +A+KIR +M ++ ++K G S + V G VH+F+V D
Sbjct: 570 LEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDK 629
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
SHP +I + L+E++ +LK+ G+ P T + D++EEEK+ L HSEKLA+AFGLI
Sbjct: 630 SHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINL 689
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNN 588
AP + I KNLRVC DCH AIKLIS++ REIIVRD +
Sbjct: 690 APNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRS 728
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 179/354 (50%), Gaps = 40/354 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + + + A+ + +M + G P T VL ACA+ D +LG H L+ + G
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKV--------------------------------F 88
+ E + +L+++Y CG A +V F
Sbjct: 270 MPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLF 329
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
D++ ++++++ ++++GYI+ G L EA+ +F + L+ D+F++V +LTAC LG L
Sbjct: 330 DEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQ 389
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+ +H + + ++++ T+L+D+Y KCG +++A VF +M ++D+ +W++MI G A
Sbjct: 390 QGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLA 449
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN-- 266
NG K AL+ FY M+ + +P + + VL+AC+ L G + + L N
Sbjct: 450 FNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEG---RLYFDEMRILYNIH 506
Query: 267 PVLGT--TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
P + +ID+ + G + +A + + M + V+W +++S ++ ++ +A
Sbjct: 507 PQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLA 560
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 147/329 (44%), Gaps = 41/329 (12%)
Query: 70 SLLN-LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
SL+N L H +L AL +FD +P + TA+ + + +FRR+ G++
Sbjct: 41 SLVNCLEPHPLHLRYALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVR 100
Query: 129 PDSFS---IVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVATSLVDLYAKCGNMEK 184
PD F+ + + ++ ++ L +H + FV+ SL+ +Y + G
Sbjct: 101 PDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAAD 160
Query: 185 ARRVFD-------------------------------QMPEKDIVSWSSMIQGYASNGFP 213
ARR FD Q P +D++SW+S+I Y+
Sbjct: 161 ARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRA 220
Query: 214 KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
+EA+ F M + P+ T++ VLSACA L LELG +E ++ L L
Sbjct: 221 REAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVAL 280
Query: 274 IDMYAKCGRMAQACKVFREM-KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
IDMYAKCG A +VF + + WNA++ G +G+V VA +F ++E I
Sbjct: 281 IDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDII-- 338
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
TF ++ G H+G + E F SM R
Sbjct: 339 --TFNSMMTGYIHSGQLREALLLFMSMRR 365
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/606 (38%), Positives = 356/606 (58%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G+ + M+ E FT VL C + Q H +
Sbjct: 276 MIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWR 335
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
GL +E V + + Y CG L + +VFD + K V SW A++ GY + +A+++
Sbjct: 336 HGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDL 395
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ ++ GL PD F+I +L AC+++ L + IHG+ G + F+ SL+ LY
Sbjct: 396 YLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYIC 455
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG A+ +FD M + +VSW+ MI GY+ NG P EA+++F M + ++P ++ V
Sbjct: 456 CGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCV 515
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
AC+ L AL LG F + + + +++IDMYAK G + + ++F +++KD
Sbjct: 516 CGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDV 575
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WN +++G ++G K A +F ++ + G++P+ TF G+L C+HAGLV++G ++FN
Sbjct: 576 ASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQ 635
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + ++ P +EHY C+VD+LGR+G++D+A LI+ MP +P++ +W +LL+ CR+H
Sbjct: 636 MLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLG 695
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E V N+L+ LEP NYVL+SN+++ S KW+D ++R M D G+QK GCSW+EV
Sbjct: 696 LGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVG 755
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
G VH FL+GD P E++ L K+ + G+ P T VL D+EEE+K L HSE
Sbjct: 756 GKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSE 815
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA++FGL+ TA +R+ KNLR+CGDCH A K ISK+ R+I+VRDN RFH F +G C
Sbjct: 816 KLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGIC 875
Query: 599 SCKDFW 604
SC D+W
Sbjct: 876 SCGDYW 881
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 217/434 (50%), Gaps = 6/434 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMR--NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
+I GF N Q + + M E F+P T VL CA E D + G+ H L VK
Sbjct: 173 IICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVK 232
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
GL+ + V SL+++Y C +L++A +FD KN+VSW ++I GY E ++ +
Sbjct: 233 LGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYL 292
Query: 119 FRRLLHRG--LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+++ +K D F+I+ VL C + +L + K +HGY G N VA + + Y
Sbjct: 293 LQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAY 352
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+CG + + RVFD M K + SW++++ GYA N P++ALD++ M L P+++T+
Sbjct: 353 TRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIG 412
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
+L AC+ + +L G F RN +P +G +L+ +Y CG+ A +F M+ +
Sbjct: 413 SLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHR 472
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
V WN +++G S NG A +F Q+ GIQP + + C+ + G++
Sbjct: 473 SLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKE-L 531
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+ + LT I ++D+ + G + + + + E + W ++AG +H +
Sbjct: 532 HCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRL-REKDVASWNVIIAGYGIHGR 590
Query: 417 TDLAEHVLNQLIAL 430
A + +++ L
Sbjct: 591 GKEALELFEKMLRL 604
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 217/441 (49%), Gaps = 11/441 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ + N+ F+ A+ ++ + + P NFT P V+KACA D LG H + K
Sbjct: 71 IVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKM 130
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L D FV +L+ +Y CG + +A+KVF+ +P++N+VSW +II G+ G L+E+ N F
Sbjct: 131 DLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAF 190
Query: 120 RRLL--HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
R +L PD ++V VL C D+ +HG + G + V SL+D+Y+
Sbjct: 191 REMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYS 250
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN--LKPEYYTM 235
KC + +A+ +FD+ +K+IVSW+SMI GYA + MQ E+ +K + +T+
Sbjct: 251 KCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTI 310
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+ VL C L+ + R+ SN ++ I Y +CG + + +VF M
Sbjct: 311 LNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDT 370
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
K WNA++ G + N + A ++ Q+ G+ P+ T LL C+ + G +
Sbjct: 371 KTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEI 430
Query: 356 FN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ ++ P I ++ L G+ A L M + + W ++AG +
Sbjct: 431 HGFALRNGLAVDPFIGI--SLLSLYICCGKPFAAQVLFDGME-HRSLVSWNVMIAGYSQN 487
Query: 415 KKTDLAEHVLNQLIA--LEPW 433
D A ++ Q+++ ++P+
Sbjct: 488 GLPDEAINLFRQMLSDGIQPY 508
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 166/294 (56%), Gaps = 4/294 (1%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFV-KTSLLNLYVHCGYLADALKVFDDIPDK 94
+L+AC + D ++G R H ++ + C++FV T ++ +Y CG +D+ VFD + K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
N+ W AI+S Y E+A+++F L+ KPD+F++ V+ AC L DL + I
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
HG + +VFV +L+ +Y KCG +E+A +VF+ MPE+++VSW+S+I G++ NGF
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 214 KEALDMFYNM--QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
+E+ + F M E+ P+ T+V VL CA +E G+ + ++
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+LIDMY+KC +++A +F + K+ V WN+++ G + V F + +++
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQ 297
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 238 VLSACASLGALELGVWASSFME-RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
+L AC +E+G + +F ++ VL T +I MY+ CG + + VF +++ K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGR-Q 354
+ WNA+VS + N + A +F +L +P+ T ++ C AGL+D G Q
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLGLGQ 121
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ M+ L + ++ + G+ G ++EA ++ + MP E N + W +++ G
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP-ERNLVSWNSIICG 176
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/580 (42%), Positives = 339/580 (58%), Gaps = 49/580 (8%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVK--AGLDCDEFVKTSLLNLYVHCGYLADA 84
L NF PF L+ + H+ I+K A L + L+ + + A
Sbjct: 67 LLRNFNSPFELR------------QVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQ 114
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+ + W + + + +AI +F RL + PD+F+ VL AC L
Sbjct: 115 IFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNL 174
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
DLS + +HG V + G SW+SMI
Sbjct: 175 LDLSNGRILHGVVEKVG-----------------------------------FRSWTSMI 199
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GY G KEA+ +F M+ +K T+V VL+ACA LGAL+LG+ + R+ F
Sbjct: 200 AGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFK 259
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
N + TLIDMY KCG + +ACKVF EM+++ V W+A++ GL+M+G + A +F +
Sbjct: 260 RNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDM 319
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ GI+PNG TF+GLL C+H GL+ EGR+FF SM+R + + P IEHYGCMVDLL R+G
Sbjct: 320 SQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGL 379
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
L EAHE I +MPM+PN +VWGALL CR+HK ++AE + L+ L+P N G YV+LSNI
Sbjct: 380 LHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNI 439
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+ + +W D A++R M D+ ++K G S + VDGVVHEF+ G+ SHP +E+I+ + +EL
Sbjct: 440 YAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEEL 499
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
+++ G+VP T VL DIEE EK F++ HSEKLAL FGL+ T + IRI KNLR+C
Sbjct: 500 LEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRIC 559
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH A KLIS I REI+VRD NRFHCF + SCSC+D+W
Sbjct: 560 EDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 155/324 (47%), Gaps = 46/324 (14%)
Query: 5 FVSNDCFQ---------HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSL 55
FV N C + AI + +R P FT VL+AC D G H +
Sbjct: 127 FVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGV 186
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
+ K G TS++ YV C G +EA
Sbjct: 187 VEKVGFRS----WTSMIAGYVQC-------------------------------GKAKEA 211
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
I++F ++ G+K + ++V VL AC LG L IH Y N G RNV ++ +L+D+
Sbjct: 212 IHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDM 271
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y KCG +E+A +VF++M E+ +VSWS+MI G A +G +EAL +F +M + ++P T
Sbjct: 272 YVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTF 331
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGT-TLIDMYAKCGRMAQACKVFREMK 294
+G+L AC+ +G + G + M R+ + + ++D+ ++ G + +A + M
Sbjct: 332 IGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP 391
Query: 295 DK-DQVVWNAVVSGLSMNGYVKVA 317
K + VVW A++ ++ V++A
Sbjct: 392 MKPNGVVWGALLGACRVHKNVEMA 415
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 141/314 (44%), Gaps = 35/314 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V + AI + M G T VL ACA LG+R H + G
Sbjct: 198 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 257
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + +L+++YV CG L +A KVF+++ ++ VVSW+A+I G G EEA+ +F
Sbjct: 258 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 317
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++P+ + + +L AC+ +G +S +GR F + +
Sbjct: 318 DMSQVGIEPNGVTFIGLLHACSHMGLIS-------------EGRRFFASMT--------- 355
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
R + +P+ I + M+ + G EA + NM +KP +L
Sbjct: 356 ------RDYGIIPQ--IEHYGCMVDLLSRAGLLHEAHEFILNMP---MKPNGVVWGALLG 404
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC +E+ A + + L++ L ++YA+ GR +V + MKD+ QV
Sbjct: 405 ACRVHKNVEMAEEAIKHLLELDPLNDGYY-VVLSNIYAEAGRWEDTARVRKFMKDR-QVK 462
Query: 301 WNAVVSGLSMNGYV 314
S ++++G V
Sbjct: 463 KTPGWSSITVDGVV 476
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/435 (51%), Positives = 302/435 (69%), Gaps = 1/435 (0%)
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+L+ YA+ G + AR +FD+MP ++ VSWS+M+ GY G +EAL +F MQ E+++P
Sbjct: 148 TLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRP 207
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ +VGVL+ACA GALE G W +++ + N GT L+DMY+KCG + A VF
Sbjct: 208 DDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVF 267
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M+ K+ + W ++ GL+M+G A +F Q+E GI+P+ F+G+LC CTHAGLVD
Sbjct: 268 ERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVD 327
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+GR+ F+SM R + + P IEHYGCMVDLL R+G L EA E+I+ MPMEP+A++WGAL+AG
Sbjct: 328 KGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAG 387
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CR HK + AE+V I LEP SG YVLLSNIY+AS + A +IR +M +KG+ K
Sbjct: 388 CRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTP 447
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEEK 529
GCS VEV+GV+H+F+VGD SHP + I SK E+ T+++ G++P VL DIEEEEK
Sbjct: 448 GCSTVEVNGVIHQFIVGDLSHPRIKDILSKWYEIDTRIRLEEGYIPDMKEVLLDIEEEEK 507
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+ L+ HSEKLA+AF LI+ + IRI KNLRVC DCH KLISK+ GREI+VRD R
Sbjct: 508 EGALSRHSEKLAIAFALISISDNMPIRIFKNLRVCHDCHHVTKLISKVYGREIVVRDRTR 567
Query: 590 FHCFIEGSCSCKDFW 604
FH F EG+CSCKD+W
Sbjct: 568 FHLFKEGTCSCKDYW 582
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 181/355 (50%), Gaps = 38/355 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACA---------------REHD 45
+IR + A+ Y + G LPT T P +LK+ A H
Sbjct: 43 LIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTVHTHA 102
Query: 46 FQLG-----------VRSHS----------LIVKAGLDCDEFVKTSLLNLYVHCGYLADA 84
+LG +R H+ L+++ D +L+ Y G LADA
Sbjct: 103 VKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADA 162
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+FD++P +N VSW+A+++GY+ G+ EA+ +F R+ ++PD +V VL AC Q
Sbjct: 163 RALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQH 222
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
G L KW+HGY+ G N+F T+LVD+Y+KCG ++ A VF++M K++++W++MI
Sbjct: 223 GALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMI 282
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
+G A +G EA+ +F M+ ++P+ +GVL AC G ++ G M R +
Sbjct: 283 KGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGI 342
Query: 265 SNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
+ ++D+ A+ G + +A ++ ++M + D ++W A+++G + V+ A
Sbjct: 343 KPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFA 397
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/626 (40%), Positives = 359/626 (57%), Gaps = 50/626 (7%)
Query: 24 EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV--HCGYL 81
+ +LP N A + QL H+ +K + FV + LL LY L
Sbjct: 11 QQYLPHNLHLSLFQTCSAPQEVEQL----HAFSLKTAIFNHPFVSSRLLALYSDPKINDL 66
Query: 82 ADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
A +FD I ++++ W II Y+ + I +F L+H L PD+F++ V+ C
Sbjct: 67 GYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGC 125
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD----------- 190
+LG + K IHG + G G +VFV SLV++Y+KCG ++ AR+VFD
Sbjct: 126 ARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWN 185
Query: 191 -------------------------------QMPEKDIVSWSSMIQGYASNGFPKEALDM 219
QMP D+V+W+ MI GY NG +A+ M
Sbjct: 186 SLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKM 245
Query: 220 FYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK 279
F+ M + +P + T+V VLSA + L L G W S+ME+N F + +LGT+LI+MYAK
Sbjct: 246 FFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAK 305
Query: 280 CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
CG + A VFR ++ K W A++ GL ++G A +F ++ K G++PN F+G+
Sbjct: 306 CGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGV 365
Query: 340 LCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP 399
L C HAGLVD+GRQ+F+ M + + P +EHYGC+VD+L R+G L+EA I++MP+ P
Sbjct: 366 LNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISP 425
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRS 459
N ++W +LL G R H K D+ E+ ++I + P G Y+LLSN+Y+AS W + +R
Sbjct: 426 NKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVRE 485
Query: 460 MMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDH 519
MM +G +K GCS VE G +HEF+VGD SHP +++IY+K+ E+ KLK G VP T
Sbjct: 486 MMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQ 545
Query: 520 VLFDIE-EEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKIT 578
VL IE E+EK+ L HSE+LA+AFGLI P IRI KNLRVC DCH KL+SKI
Sbjct: 546 VLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIY 605
Query: 579 GREIIVRDNNRFHCFIEGSCSCKDFW 604
REIIVRDN RFH F GSCSC D+W
Sbjct: 606 SREIIVRDNCRFHHFKNGSCSCMDYW 631
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 176/362 (48%), Gaps = 47/362 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+ +V N I ++ + +E +LP NFT P V+K CAR Q G + H L +K G
Sbjct: 87 IIKCYVENQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIG 145
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-----------NVVSWTAIISGYINE 109
D FV+ SL+N+Y CG + A KVFD + DK N+VSW A+I+GY+
Sbjct: 146 FGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKS 205
Query: 110 GNLE-------------------------------EAINMFRRLLHRGLKPDSFSIVRVL 138
G+ + +A+ MF +L G +P ++V VL
Sbjct: 206 GDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVL 265
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
+A + L L +WIH Y+ + G + + TSL+++YAKCG +E A VF + +K +
Sbjct: 266 SAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVG 325
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
W+++I G +G AL +F M + LKP +GVL+AC G ++ G M
Sbjct: 326 HWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMM 385
Query: 259 ERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVK 315
NE+ P L L+D+ + G + +A M ++V+W +++ G +G +
Sbjct: 386 -MNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKID 444
Query: 316 VA 317
+
Sbjct: 445 IG 446
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/553 (42%), Positives = 338/553 (61%), Gaps = 40/553 (7%)
Query: 92 PDKNVVSWTAIISGYIN-----EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
P W +I ++ G I++F R+ G++PD + +L +
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSL 79
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ--------------- 191
L + +H + G + FV TSL+ +Y+ CGN+ AR+VFD+
Sbjct: 80 LHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINA 139
Query: 192 ----------------MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR---ENLKPEY 232
MPE++++SWS MI GY G KEAL +F MQ +++P
Sbjct: 140 NFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 199
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+TM GVL+AC LGALE G WA +++++ + VLGT LIDMYAKCG + +A VF
Sbjct: 200 FTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSN 259
Query: 293 M-KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
+ +KD + W+A++SGL+M+G + G+F ++ G++PN TF+ + C C H GLV E
Sbjct: 260 LGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSE 319
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G+ + M+ +S+ P I+HYGCMVDL GR+G++ EA ++KSMPMEP+ +VWGALL+G
Sbjct: 320 GKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGS 379
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
R+H + E L +LI LEP NSG YVLLSN+Y+ +W D +R +M GI+K+ G
Sbjct: 380 RMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPG 439
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
CS +EV GV+HEF VGD+SHP + +I+ L+E+ +LK G+V T VL D++EE K+
Sbjct: 440 CSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKEL 499
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L+ HSEKLALA+G + T+P IRI KNLR+C DCH AIK+ISK+ REIIVRD NRFH
Sbjct: 500 ALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFH 559
Query: 592 CFIEGSCSCKDFW 604
F +G CSC+D+W
Sbjct: 560 HFTQGLCSCRDYW 572
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 184/341 (53%), Gaps = 43/341 (12%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
I + MR G P TFPF+L++ A LG H+ I++ GL D FV+TSL+++
Sbjct: 49 ISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISM 108
Query: 75 YVHCGYLADALKVFDDI-------------------------------PDKNVVSWTAII 103
Y CG L A +VFD+I P++NV+SW+ +I
Sbjct: 109 YSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMI 168
Query: 104 SGYINEGNLEEAINMFRRLLHRG---LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
+GY+ G +EA+ +FR + G ++P+ F++ VL AC +LG L KW H Y+++
Sbjct: 169 NGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKC 228
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQM-PEKDIVSWSSMIQGYASNGFPKEALDM 219
G +V + T+L+D+YAKCG++EKA VF + P KD+++WS+MI G A +G +E + +
Sbjct: 229 GMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGL 288
Query: 220 FYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER--NEFLSNPVLG--TTLID 275
F M + ++P T + V AC G + G ++ R ++ P + ++D
Sbjct: 289 FSKMINQGVRPNAVTFLAVFCACVHGGLVSEG---KDYLRRMTEDYSIIPTIQHYGCMVD 345
Query: 276 MYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVK 315
+Y + GR+ +A V + M + D +VW A++SG M+G ++
Sbjct: 346 LYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIE 386
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/587 (41%), Positives = 354/587 (60%), Gaps = 38/587 (6%)
Query: 53 HSLIVKAGL--DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ +++ GL D V L Y G L +L + D + +T+ I + + G
Sbjct: 309 HAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRTRDPTAIFYTSAIHAHSSRG 368
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+ A+ + +L +GL P + ++ L AC LS + +HGY + + +VAT
Sbjct: 369 HRLPALALLSDMLAQGLLPTAHTLSASLPACR---GLSPGRALHGYAFKLALAGDSYVAT 425
Query: 171 SLVDLYAKCGN--------------------------------MEKARRVFDQMPEKDIV 198
+L+ +YA+ G+ ++ AR +FD +P KD V
Sbjct: 426 ALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFV 485
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
W++MI GY +G P EAL +F M ++P+ T+V VLSA A LG +E G W S++
Sbjct: 486 CWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYV 545
Query: 259 ERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ + + V +GT LIDMY KCG + A VF + DKD VVWNA+++G +M+G + A
Sbjct: 546 KNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKA 605
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
+F Q + G+ P TF+GLL C+H+G+V+EGR+FF SM R + + P IEHYGCMVD
Sbjct: 606 LEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVD 665
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGN 437
LLGR+G + EA L++SM + P+A++W +LLA CRLHK L + + + L+A NSG
Sbjct: 666 LLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSGM 725
Query: 438 YVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKI 497
Y+LLSNIY+A W + A++RSMM GIQK GCS +E+D V+EF+ GD SHP +++I
Sbjct: 726 YILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIEIDREVYEFVAGDMSHPRTDEI 785
Query: 498 YSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRI 557
Y LD++ +K G VP T+ VL D++E K+ LA HSEKLALAFGLI+T P I+I
Sbjct: 786 YVMLDKMNGLVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLALAFGLISTQPGATIKI 845
Query: 558 AKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLR C DCH +KLIS+ITGR+I+ RD NRFH F++GSCSC D+W
Sbjct: 846 VKNLRACSDCHAVLKLISRITGRKIVFRDRNRFHHFVDGSCSCGDYW 892
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 177/356 (49%), Gaps = 40/356 (11%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ + M +G LPT T L AC G H K L D +V T+LL
Sbjct: 373 ALALLSDMLAQGLLPTAHTLSASLPAC---RGLSPGRALHGYAFKLALAGDSYVATALLG 429
Query: 74 LYVHC--------------------------------GYLADALKVFDDIPDKNVVSWTA 101
+Y G L DA +FD +P K+ V W A
Sbjct: 430 MYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNA 489
Query: 102 IISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG 161
+I GY G EA+ +FRR+L G++PD ++V VL+A QLG + + KW+H YV +
Sbjct: 490 MIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSR 549
Query: 162 KGR-NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
+ + +V V T+L+D+Y KCG++ A VF + +KDIV W++MI GYA +G ++AL+MF
Sbjct: 550 RVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMF 609
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYA 278
+ + L P T +G+L+AC+ G +E G MER E+ +P + ++D+
Sbjct: 610 VQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMER-EYGIDPKIEHYGCMVDLLG 668
Query: 279 KCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+ G + +A + + MK D V+W ++++ ++ + + + L G+ +G
Sbjct: 669 RAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSG 724
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/574 (40%), Positives = 356/574 (62%), Gaps = 2/574 (0%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +L AC + + G R H+ ++K +++T LL Y C L DA KV D++P
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
+KNVVSWTA+IS Y G+ EA+ +F ++ KP+ F+ VLT+C + L K
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IHG + + ++FV +SL+D+YAK G +++AR +F+ +PE+D+VS +++I GYA G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+EAL+MF+ + E + P Y T +L+A + L L+ G A + R E VL +
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQP 331
LIDMY+KCG ++ A ++F M ++ + WNA++ G S +G + +F + ++ ++P
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
+ T + +L GC+H + D G F+ M + + P EHYGC+VD+LGR+G++DEA E
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
IK MP +P A V G+LL CR+H D+ E V +LI +EP N+GNYV+LSN+Y+++ +
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474
Query: 451 WNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKA 510
W D +R+MM K + K G SW++ + +H F D +HP E++ +K+ E++ K+K
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Query: 511 AGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEA 570
AG+VP VL+D++EE+K+ L HSEKLAL FGLI T IR+ KNLR+C DCH
Sbjct: 535 AGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNF 594
Query: 571 IKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K+ SK+ RE+ +RD NRFH ++G CSC D+W
Sbjct: 595 AKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 161/285 (56%), Gaps = 8/285 (2%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
F MR++G P FTF VL +C R LG + H LIVK D FV +SLL++Y
Sbjct: 141 FAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYA 199
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVR 136
G + +A ++F+ +P+++VVS TAII+GY G EEA+ MF RL G+ P+ +
Sbjct: 200 KAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYAS 259
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
+LTA + L L K H +V + SL+D+Y+KCGN+ ARR+FD MPE+
Sbjct: 260 LLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERT 319
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALELGVWAS 255
+SW++M+ GY+ +G +E L++F M+ E +KP+ T++ VLS C+ + G+
Sbjct: 320 AISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIF 379
Query: 256 SFMERNEFLSNPVLGTT----LIDMYAKCGRMAQACKVFREMKDK 296
M E+ + P GT ++DM + GR+ +A + + M K
Sbjct: 380 DGMVAGEYGTKP--GTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + A+E ++ + +EG P T+ +L A + G ++H +++
Sbjct: 225 IIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L ++ SL+++Y CG L+ A ++FD++P++ +SW A++ GY G E + +FR
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 121 RLL-HRGLKPDSFSIVRVLTACT--QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+ + +KPD+ +++ VL+ C+ ++ D + E G +VD+
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLG 404
Query: 178 KCGNMEKARRVFDQMPEK 195
+ G +++A +MP K
Sbjct: 405 RAGRIDEAFEFIKRMPSK 422
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/624 (38%), Positives = 360/624 (57%), Gaps = 21/624 (3%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNF--TFPFVLKACAREHDFQLGVRSHSLIVKA 59
IR + F A+ + MR ++ + P LK+CA LG H+L +++
Sbjct: 20 IRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRS 79
Query: 60 GLDCDEFVKTSLLNLY--VHCGYL-----------------ADALKVFDDIPDKNVVSWT 100
G D F +LLNLY V C YL KVFD++ +++VVSW
Sbjct: 80 GAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWN 139
Query: 101 AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
++ G EG EA+ R++ G +PDSF++ VL + D+ +HG+
Sbjct: 140 TLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRN 199
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
G +VFV +SL+D+YA C + + +VFD +P +D + W+S++ G A NG +EAL +F
Sbjct: 200 GFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIF 259
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
M + ++P T ++ C +L +L G +++ F N + ++LIDMY KC
Sbjct: 260 RRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKC 319
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G ++ A +F +M D V W A++ G +++G + A +F ++E +PN TF+ +L
Sbjct: 320 GEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVL 379
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C+HAGLVD+G ++F SMS + + P +EH+ + D LGR+G+LDEA+ I M ++P
Sbjct: 380 TACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPT 439
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSM 460
A VW LL CR+HK T LAE V +++ LEP + G++V+LSN+YSAS +WN+AA +R
Sbjct: 440 ASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRES 499
Query: 461 MGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHV 520
M KG++K CSW+EV +H F+ D SHP ++I L+ + ++ G VP T+ V
Sbjct: 500 MRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDV 559
Query: 521 LFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGR 580
DIEEE K Y L HSEKLA+ FG+I+T IR+ KNLRVC DCH K ISK+ R
Sbjct: 560 FQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADR 619
Query: 581 EIIVRDNNRFHCFIEGSCSCKDFW 604
EI+VRD NRFH F +G+CSC DFW
Sbjct: 620 EIVVRDANRFHHFKDGNCSCGDFW 643
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/603 (38%), Positives = 357/603 (59%), Gaps = 38/603 (6%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC---GYLADALKVFDDIPD 93
L+ C+++ + + + H+ ++K GL D + T L+ + +L A VFD
Sbjct: 21 LQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
+ W +I G+ E ++ +++R+L ++++ +L AC+ L I
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG-- 211
H + + G +V+ SL++ YA GN + A +FD++PE D VSW+S+I+GY G
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 212 -----------------------------FPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
KEAL +F+ MQ +++P+ ++ LSAC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
A LGALE G W S++ + + VLG LIDMYAKCG M +A +VF+ +K K W
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
A++SG + +G+ + A F +++K GI+PN TF +L C++ GLV+EG+ F SM R
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
++L P IEHYGC+VDLLGR+G LDEA I+ MP++PNA++WGALL CR+HK +L E
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
+ LIA++P++ G YV +NI++ KW+ AA+ R +M ++G+ K+ GCS + ++G H
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497
Query: 483 EFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD-IEEEEKQYFLACHSEKLA 541
EFL GD SHP EKI SK + KL+ G+VP + +L D ++++E++ + HSEKLA
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLA 557
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+ +GLI T P +IRI KNLRVC DCH+ KLISKI R+I++RD RFH F +G CSC
Sbjct: 558 ITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCG 617
Query: 602 DFW 604
D+W
Sbjct: 618 DYW 620
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 176/349 (50%), Gaps = 33/349 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRGF +D + ++ Y M +TFP +LKAC+ F+ + H+ I K G
Sbjct: 86 MIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D + SL+N Y G A +FD IP+ + VSW ++I GY+ G ++ A+ +FR
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 121 RLLHRG-------------------------------LKPDSFSIVRVLTACTQLGDLST 149
++ + ++PD+ S+ L+AC QLG L
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
KWIH Y+N+ + + L+D+YAKCG ME+A VF + +K + +W+++I GYA
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+G +EA+ F MQ+ +KP T VL+AC+ G +E G MER+ L +
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 270 GT-TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKV 316
++D+ + G + +A + +EM K + V+W A++ ++ +++
Sbjct: 386 HYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 434
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/553 (42%), Positives = 353/553 (63%), Gaps = 5/553 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ + K+ L D F+ L+ Y GY DALK+FDD+P K++VSW ++ISG+ L
Sbjct: 62 HARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGF--SRCL 119
Query: 113 EEAINMFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
++ F + +KP+ +I+ +++AC+ G L K+IHG+ + G V VA S
Sbjct: 120 HMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALDAGKYIHGFGIKVGGTLEVKVANS 177
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
L+++Y K G++ A R+F+ +P+ + VSW+S+I +NG +E +D F M+R ++ +
Sbjct: 178 LINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQD 237
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
T++ +L AC LG +L M F + + T L+D YAK GR++ + VF
Sbjct: 238 EGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFT 297
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
E+ D+V W A+++G + +G + A +F + G++P+ TF LL C+H+GLV+E
Sbjct: 298 EVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNE 357
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G+ +FN MS V+ + P ++HY CMVDLLGR G L++A+E+I++MPMEPNA VWGALL C
Sbjct: 358 GKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGAC 417
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
R+H +L + V LI +EP + NY++LSN+YSAS W DAAK+R+++ ++G+++ G
Sbjct: 418 RVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPG 477
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
S +E H F VGD SHP +EKIYSKL+EL K++ AG+ T++VL D+EEE K+
Sbjct: 478 YSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKED 537
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
+ HSEKLA+AFGL+ + + + I KNLR+CGDCH KLIS I R II+RD RFH
Sbjct: 538 MINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFH 597
Query: 592 CFIEGSCSCKDFW 604
F +G CSC D+W
Sbjct: 598 HFSDGFCSCADYW 610
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 164/342 (47%), Gaps = 33/342 (9%)
Query: 122 LLHRGLKPDSFSIVR-----------VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
LLHR SF +VR +L A +S + IH V ++ R+ F+
Sbjct: 24 LLHR-----SFHLVRQCATPEAIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGD 78
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLK 229
LV Y K G E A ++FD MP KD+VSW+S+I G++ +L FY M+ E ++K
Sbjct: 79 QLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVK 136
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P T++ ++SAC+ GAL+ G + F + + +LI+MY K G + AC++
Sbjct: 137 PNEVTILSMISACS--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRL 194
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F + D + V WN++++ NG + F ++ + GI+ + T + LL C H G V
Sbjct: 195 FEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLG-V 253
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ + + + I ++D + G+L ++ + + + + W A+LA
Sbjct: 254 GKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGF-ADRVAWTAMLA 312
Query: 410 GCRLH----KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
G H + L E + N+ LEP ++V +++ SA
Sbjct: 313 GYAAHGLGREAIKLFESMANK--GLEP----DHVTFTHLLSA 348
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 7/241 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I V+N C + I+++N MR G T +L+AC +L H L+ G
Sbjct: 209 IIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTG 268
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ T+LL+ Y G L+ + VF ++ + V+WTA+++GY G EAI +F
Sbjct: 269 FGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFE 328
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAKC 179
+ ++GL+PD + +L+AC+ G ++ K ++E G V + +VDL +C
Sbjct: 329 SMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRC 388
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQRENLKPEYYTM 235
G + A V MP E + W +++ +G KE + NM E L P Y M
Sbjct: 389 GLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINM--EPLDPRNYIM 446
Query: 236 V 236
+
Sbjct: 447 L 447
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/605 (40%), Positives = 349/605 (57%), Gaps = 29/605 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ F NDCF+ A++ ++ MR GF P NFTF V KAC F +G H +K+
Sbjct: 211 MVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSR 270
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D +V +LL+LY G + DA F++IP K+V+ W+ +I+ Y +EA+ MF
Sbjct: 271 YELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFF 330
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + P+ F+ VL AC + L+ IH +V + G +VFV+ +L+D+YAKCG
Sbjct: 331 QMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG 390
Query: 181 NMEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
ME + +F + P + D+ W+++I G+ G ++AL +F NM ++ T L
Sbjct: 391 RMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSAL 450
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACASL ALE G+ S + F + V+ LIDMYAKCG + A VF M +D+V
Sbjct: 451 RACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEV 510
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG SM+G C +AGL+D+G+ +F SM
Sbjct: 511 SWNAMISGYSMHGL----------------------------ACANAGLLDQGQAYFTSM 542
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + P IEHY CMV LLGR G LD+A +LI +P +P+ +VW ALL C +H +L
Sbjct: 543 IQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIEL 602
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
++ +EP + +VLLSN+Y+ + +W++ A +R M KG++K G SW+E G
Sbjct: 603 GRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQG 662
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F VGD SHP I L+ L K K AG++P + VL D+E+EEK+ L HSE+
Sbjct: 663 TVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSER 722
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LAL+FG+I T IRI KNLR+C DCH AIK ISK+ REI+VRD NRFH F EG CS
Sbjct: 723 LALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCS 782
Query: 600 CKDFW 604
C D+W
Sbjct: 783 CGDYW 787
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 215/415 (51%), Gaps = 3/415 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+G+ + F AIE + + EG F F +LK +LG H+ I K G
Sbjct: 110 LIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLG 169
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV T+L++ Y CG + A +VFD I K++VSWT +++ + +EA+ +F
Sbjct: 170 HESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFS 229
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G KP++F+ V AC L K +HG ++ +++V +L+DLY K G
Sbjct: 230 QMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSG 289
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ AR F+++P+KD++ WS MI YA + KEA++MF+ M++ + P +T VL
Sbjct: 290 DIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQ 349
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA++ L LG + + S+ + L+D+YAKCGRM + +F E ++ V
Sbjct: 350 ACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVT 409
Query: 301 -WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN V+ G G + A +F + + +Q T+ L C ++ G Q +S+
Sbjct: 410 PWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQ-IHSL 468
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + I ++D+ + G + +A L+ + + + + W A+++G +H
Sbjct: 469 TVKTTFDKDIVVTNALIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMISGYSMH 522
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 189/389 (48%), Gaps = 10/389 (2%)
Query: 28 PTNF---TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA 84
P+ F + L+ C ++ + G H I+K G D F LLN+YV +L DA
Sbjct: 33 PSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDA 92
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG--LKPDSFSIVRVLTACT 142
K+FD++P++N +S+ +I GY EAI +F RL G L P F+ + L
Sbjct: 93 SKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSM 152
Query: 143 QLGDLSTAKW-IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
G+L W IH + + G N FV T+L+D Y+ CG ++ AR VFD + KD+VSW+
Sbjct: 153 DCGELG---WGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWT 209
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
M+ +A N KEAL +F M+ KP +T V AC L A ++G ++
Sbjct: 210 GMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKS 269
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ + +G L+D+Y K G + A F E+ KD + W+ +++ + + K A +F
Sbjct: 270 RYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMF 329
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
Q+ + + PN TF +L C ++ G Q + ++ L + ++D+ +
Sbjct: 330 FQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKI-GLHSDVFVSNALMDVYAK 388
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G+++ + L P + W ++ G
Sbjct: 389 CGRMENSMXLFAESPHRNDVTPWNTVIVG 417
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/675 (37%), Positives = 371/675 (54%), Gaps = 76/675 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G F AI+ M +GF PT FT VL +CA +G + HS +VK G
Sbjct: 135 MVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG 194
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
L V S+LN+Y CG A VF+
Sbjct: 195 LGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFE 254
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLS 148
+P +++VSW A+I+GY G +A+ +F R+LH + PD F+I VL+AC LG++
Sbjct: 255 SMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVR 314
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ----------------- 191
K +H Y+ N V +L+ YAK G++E ARR+ DQ
Sbjct: 315 IGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEG 374
Query: 192 ----------------MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
M +D+V+W++MI GY NG EA+D+F +M +P YT+
Sbjct: 375 YVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTL 434
Query: 236 VGVLSACASLGALELGVWA-----SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
VLS CASL L+ G S +ER+ +SN + I MYA+ G A ++F
Sbjct: 435 AAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAI-----ITMYARSGSFPWARRMF 489
Query: 291 REM-KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
++ K+ + W +++ L+ +G + A G+F ++ + G++P+ T+VG+L C+HAG V
Sbjct: 490 DQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 549
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+EG+++++ + + P + HY CMVDLL R+G EA E I+ MP+EP+AI WG+LL+
Sbjct: 550 NEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLS 609
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKI 469
CR+HK +LAE +L++++P NSG Y ++N+YSA +W+DAA+I +K ++K
Sbjct: 610 ACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKE 669
Query: 470 RGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEK 529
G SW + +H F D HP + +Y+ + ++K AGFVP VL D+++E K
Sbjct: 670 TGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELK 729
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+ L+ HSEKLA+AFGLI+T K +R+ KNLRVC DCH AIK ISK+T REIIVRD R
Sbjct: 730 EELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATR 789
Query: 590 FHCFIEGSCSCKDFW 604
FH F +G CSCKD+W
Sbjct: 790 FHHFRDGLCSCKDYW 804
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 186/434 (42%), Gaps = 68/434 (15%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F SLL+++ G LADA VF ++P+++ VSWT ++ G G EAI +
Sbjct: 99 FTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTAD 158
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G P F++ VL++C + + +H +V + G G V VA S++++Y KCG+ E A
Sbjct: 159 GFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETA 218
Query: 186 RRVFDQ-------------------------------MPEKDIVSWSSMIQGYASNGFPK 214
VF++ MP + IVSW++MI GY NG
Sbjct: 219 STVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDA 278
Query: 215 EALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
+AL +F M E ++ P+ +T+ VLSACA+LG + +G +++ R E N + L
Sbjct: 279 KALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNAL 338
Query: 274 IDMYAKCGR---------------------------------MAQACKVFREMKDKDQVV 300
I YAK G M A ++F M ++D V
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVA 398
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ G NG A +F + CG +PN T +L C +D G+Q
Sbjct: 399 WTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAI 458
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R L ++ + RSG A + + I W +++ H + + A
Sbjct: 459 RSL-LERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEA 517
Query: 421 EHVLNQLI--ALEP 432
+ +++ +EP
Sbjct: 518 VGLFEEMLRAGVEP 531
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 34/280 (12%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
RNVF SL+ ++AK G + AR VF +MPE+D VSW+ M+ G G EA+ +M
Sbjct: 96 RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC--- 280
+ P +T+ VLS+CA A +G SF+ + S + ++++MY KC
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDA 215
Query: 281 ----------------------------GRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
GRM A +F M + V WNA+++G + NG
Sbjct: 216 ETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNG 275
Query: 313 YVKVAFGVFGQ-LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
A +F + L + + P+ T +L C + G V G+Q + R + +
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRT-EMAYNSQV 334
Query: 372 YGCMVDLLGRSGQLDEAHELI-KSMPMEPNAIVWGALLAG 410
++ +SG ++ A ++ +SM + N I + ALL G
Sbjct: 335 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEG 374
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/589 (40%), Positives = 353/589 (59%), Gaps = 37/589 (6%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLY--VHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ I++ GL +V T L+ + V + L VF + N WTA+I GY +G
Sbjct: 62 HAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQG 121
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVA 169
L E+ N + R+ G+ P SF+ + AC ++ K +H + G +++V
Sbjct: 122 LLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVG 181
Query: 170 TSLVDLYAKCGNMEKARRVFDQM-------------------------------PEKDIV 198
S++DLY KCG + AR+VFD+M P KD+V
Sbjct: 182 NSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMV 241
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+W++M+ GYA NG PKEAL+ F MQ ++ + T+ GV+SACA LGA++ W
Sbjct: 242 AWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIA 301
Query: 259 ERNEF--LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
ER+ F N V+G+ LIDMY+KCG +A KVF MK+++ +++++ G +M+G
Sbjct: 302 ERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHS 361
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A +F + K I+PN TF+G+L C+HAGLV++GRQ F M + F + P +HY CMV
Sbjct: 362 ALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMV 421
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSG 436
DLLGR+G L+EA +L+K+MPMEPN VWGALL CR+H D+A+ N+L LEP G
Sbjct: 422 DLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIG 481
Query: 437 NYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE-VDGVVHEFLVGDNSHPLSE 495
NY+LLSNIY+++ +W + +K+R ++ +KG +K GCSW E +G +H+F GD +HP S
Sbjct: 482 NYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSS 541
Query: 496 KIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVI 555
+I L +L +L++ G+ P +D+ ++EK+ L HSEKLALA+GL+ T D I
Sbjct: 542 EIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTI 601
Query: 556 RIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+I KN+R+C DCH + S+ITGREIIVRDN RFH F G+CSC +FW
Sbjct: 602 KIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 197/369 (53%), Gaps = 38/369 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHS-LIVKA 59
MIRG+ + FY MR +G P +FTF + KAC + LG + H+ I+
Sbjct: 113 MIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIG 172
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------ 89
G D +V S+++LYV CG+L A KVFD
Sbjct: 173 GFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLF 232
Query: 90 -DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
D+P K++V+WTA+++GY G +EA+ F+++ G++ D ++ V++AC QLG +
Sbjct: 233 DDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVK 292
Query: 149 TAKWIHGYVNEAGKGR--NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
A WI +G G NV V ++L+D+Y+KCG+ ++A +VF+ M E+++ S+SSMI G
Sbjct: 293 HANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILG 352
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS- 265
YA +G AL +F++M + ++P T +G+LSAC+ G +E G + ME+ ++
Sbjct: 353 YAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAP 412
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+P ++D+ + G + +A + + M + + VW A++ ++G +A +L
Sbjct: 413 SPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANEL 472
Query: 325 EKCGIQPNG 333
K ++PNG
Sbjct: 473 FK--LEPNG 479
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/599 (39%), Positives = 369/599 (61%), Gaps = 9/599 (1%)
Query: 10 CFQH----AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
C+Q A++ +S+++ G + T+ ++K C G + G
Sbjct: 37 CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F+ L+N+YV L DA ++FD +P +NV+SWT +IS Y ++A+ + +L
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
++P+ ++ VL +C + D+ + +H + + G +VFV ++L+D++AK G E A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
VFD+M D + W+S+I G+A N AL++F M+R E T+ VL AC L
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
LELG+ A + + + + +L L+DMY KCG + A +VF +MK++D + W+ ++
Sbjct: 274 ALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMI 331
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
SGL+ NGY + A +F +++ G +PN T VG+L C+HAGL+++G +F SM +++ +
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
P+ EHYGCM+DLLG++G+LD+A +L+ M EP+A+ W LL CR+ + LAE+
Sbjct: 392 DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAK 451
Query: 426 QLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFL 485
++IAL+P ++G Y LLSNIY+ S KW+ +IR+ M D+GI+K GCSW+EV+ +H F+
Sbjct: 452 KVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFI 511
Query: 486 VGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFG 545
+GDNSHP ++ KL++L +L G+VP T+ VL D+E E+ + L HSEKLALAFG
Sbjct: 512 IGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFG 571
Query: 546 LITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
L+T + VIRI KNLR+CGDCH KL SK+ R I++RD R+H F +G CSC D+W
Sbjct: 572 LMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 168/310 (54%), Gaps = 9/310 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + Q A+E M + P +T+ VL++C D ++ H I+K G
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEG 189
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+++L++++ G DAL VFD++ + + W +II G+ + A+ +F+
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G + ++ VL ACT L L + +V+ +++ + +LVD+Y KCG
Sbjct: 250 RMKRAGFIAEQATLTSVLRACTGLALLELG--MQAHVHIVKYDQDLILNNALVDMYCKCG 307
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A RVF+QM E+D+++WS+MI G A NG+ +EAL +F M+ KP Y T+VGVL
Sbjct: 308 SLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G LE G W + + +PV +ID+ K G++ A K+ EM+ + D
Sbjct: 368 ACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 426
Query: 298 QVVWNAVVSG 307
V W ++
Sbjct: 427 AVTWRTLLGA 436
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/534 (43%), Positives = 346/534 (64%), Gaps = 9/534 (1%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
++ Y G L++A ++F+++P ++V +WTA++SG++ G L+EA +F + + +
Sbjct: 252 MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----N 307
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S ++ Q + A+ + + RN ++V YA+CGN+++A+ +FD
Sbjct: 308 EVSWNAMIAGYVQSQQIEKARELFDQM----PSRNTSSWNTMVTGYAQCGNIDQAKILFD 363
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+MP++D +SW++MI GYA +G +EAL +F M+R+ + LS+CA + ALEL
Sbjct: 364 EMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALEL 423
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + + F + + G L+ MY KCG + +A VF ++ +KD V WN +++G +
Sbjct: 424 GKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYAR 483
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+G+ K A +F + K I+P+ T VG+L C+H G VD+G ++FNSM + + +T +
Sbjct: 484 HGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAK 542
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
HY CM+DLLGR+G+LDEA L+KSMP P+A WGALL R+H T+L E ++ +
Sbjct: 543 HYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM 602
Query: 431 EPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNS 490
EP NSG YVLLSN+Y+AS +W + ++RS M DKG++K+ G SWVE+ H F VGD S
Sbjct: 603 EPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCS 662
Query: 491 HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTA 550
HP +E+IY+ L+EL +LK GFV +T VL D+EEEEK++ L HSEKLA+AFG+++
Sbjct: 663 HPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIP 722
Query: 551 PKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P IR+ KNLRVC DCH AIK ISKIT R+IIVRD+NRFH F EGSCSC D+W
Sbjct: 723 PGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 199/444 (44%), Gaps = 57/444 (12%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKA----CAREHDFQLGVRSHSLIV 57
I ++ + A+ +N MR + N L CAR+ +
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARK------------VF 114
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
+ D D +L+ YV G L+ A +F+ +P+K+VVSW A++SG+ G +EEA
Sbjct: 115 EKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK--------W--------IHGYVNEA- 160
+F ++L + + S +L+A Q G + A+ W + GYV +
Sbjct: 175 IFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKR 230
Query: 161 -GKGRNVFVATSLVDL---------YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
R++F + D YA+ G + +ARR+F+++P +D+ +W++M+ G+ N
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQN 290
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G EA +F M +N + G + + A EL RN N
Sbjct: 291 GMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKAREL---FDQMPSRNTSSWN---- 343
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
T++ YA+CG + QA +F EM +D + W A++SG + +G + A +F ++++ G
Sbjct: 344 -TMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
N + L C ++ G+Q + + T I ++ + G+ G ++EA +
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG-NALLAMYGKCGSIEEAFD 461
Query: 391 LIKSMPMEPNAIVWGALLAGCRLH 414
+ + + E + + W ++AG H
Sbjct: 462 VFEDIT-EKDIVSWNTMIAGYARH 484
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 167/363 (46%), Gaps = 53/363 (14%)
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
I D ++V W IS Y+ +G E A+++F G++ S + + G LS
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFN-----GMRRRSTVTYNAMIS----GYLSNN 105
Query: 151 KW-IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
K+ V E R++ ++ Y K GN+ AR +F+QMPEKD+VSW++M+ G+A
Sbjct: 106 KFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQ 165
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL-------------ELGVW--- 253
NGF +EA +F M +N + G+LSA G + E+ W
Sbjct: 166 NGFVEEARKIFDQMLVKN----EISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCL 221
Query: 254 ------------ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
A S +R + + + +I YA+ G +++A ++F E+ +D W
Sbjct: 222 MGGYVRKKRLDDARSLFDRMP-VRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAW 280
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
A+VSG NG + A +F ++ + N ++ ++ G + +++ R+ F+ M
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIEKARELFDQMP- 335
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+ + MV + G +D+A L MP + + I W A+++G +++ A
Sbjct: 336 ----SRNTSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAMISGYAQSGQSEEAL 390
Query: 422 HVL 424
H+
Sbjct: 391 HLF 393
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 114/232 (49%), Gaps = 6/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + A+ + M+ +G + L +CA +LG + H +VKAG
Sbjct: 376 MISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAG 435
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+LL +Y CG + +A VF+DI +K++VSW +I+GY G +EA+ +F
Sbjct: 436 FQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFE 495
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +KPD ++V VL+AC+ G + ++ + G N T ++DL +
Sbjct: 496 S-MKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRA 554
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
G +++A + MP D +W +++ +G ++A + + M+ +N
Sbjct: 555 GRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDN 606
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/608 (38%), Positives = 367/608 (60%), Gaps = 14/608 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I +V +C + A+E + +GF P +T ++ AC +LG++ HSL ++ G
Sbjct: 225 LISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMG 284
Query: 61 LDCDEFVKTSLLNLYV--HCGYLAD-ALKVFDDIPDKNVVSWTAIISGYINEGNLE-EAI 116
L D V L+++Y + G D A KVF+ +P +V+SWTA+ISGY+ G E + +
Sbjct: 285 LASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVM 344
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F +L+ +KP+ + +L +C + D + + +H +V ++ + V +LV +Y
Sbjct: 345 ALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMY 404
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ G ME+ARRVF+Q+ E+ ++ + +G FP LD + + R ++ T
Sbjct: 405 AESGCMEEARRVFNQLYERSMIP--CITEG---RDFP---LD--HRIVRMDVGISSSTFA 454
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
++SA AS+G L G + + F S+ + +L+ MY++CG + AC+ F E+KD+
Sbjct: 455 SLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDR 514
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ + W +++SGL+ +GY + A +F + G++PN T++ +L C+H GLV EG+++F
Sbjct: 515 NVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYF 574
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
SM R L P +EHY CMVDLL RSG + EA E I MP++ +A+VW LL CR H
Sbjct: 575 RSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDN 634
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
++ E ++ LEP + YVLLSN+Y+ + W++ A+IRS M D + K G SW+E
Sbjct: 635 IEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWME 694
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
V+ HEF GD SHP ++ IY KLD L ++K G+VP T VL D+ +E K+ +L H
Sbjct: 695 VENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQH 754
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEK+A+AFGLITT+ IRI KNLRVC DCH AIK +SK T REII+RD+NRFH +G
Sbjct: 755 SEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDG 814
Query: 597 SCSCKDFW 604
CSC ++W
Sbjct: 815 ECSCGEYW 822
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 175/361 (48%), Gaps = 13/361 (3%)
Query: 45 DFQLGVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-KNVVSWTAI 102
D +LG H +++ L D D V SLL LY CG +A A VFD + +++VSWTA+
Sbjct: 63 DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122
Query: 103 ISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC--TQLGDLSTAKWIHGYVNEA 160
S G ++ + +L GL P+++++ AC +L L +
Sbjct: 123 ASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMG 182
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
G +V V ++L+D+ A+ G++ AR+VFD + EK +V W+ +I Y +EA+++F
Sbjct: 183 LWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELF 242
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
+ + +P+ YTM ++SAC LG++ LG+ S R S+ + L+DMYAK
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKS 302
Query: 281 G---RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK-VAFGVFGQLEKCGIQPNGNTF 336
M A KVF M D + W A++SG +G + +FG++ I+PN T+
Sbjct: 303 NIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITY 362
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY--GCMVDLLGRSGQLDEAHELIKS 394
+L C D GRQ + V H +V + SG ++EA +
Sbjct: 363 SSILKSCASISDHDSGRQVH---AHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQ 419
Query: 395 M 395
+
Sbjct: 420 L 420
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/563 (43%), Positives = 357/563 (63%), Gaps = 8/563 (1%)
Query: 49 GVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI 107
G + H L +++GL D F ++LL++Y HC DA K FD+IP N V TA+ SGY+
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 108 NEGNLEEAINMFRRLLHRGLKP--DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+ ++ +FR+L+ G D + + +A ++ D +H V + G +
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227
Query: 166 VFVATSLVDLYAKCG--NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
V +++D YAK G ++ AR+VFD M EKD+VSW+SMI YA NG +AL ++ M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKM 286
Query: 224 QR--ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
++K T+ +L ACA G ++ G + + R N +GT+++DMY+KCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
R+ A K F+++K+K+ + W+A+++G M+G+ + A +F ++ + G PN TF+ +L
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLA 406
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C+HAGL+D+GR ++N+M + F + P +EHYGCMVDLLGR+G LDEA+ LIK M ++P+A
Sbjct: 407 ACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 466
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMM 461
+WGALL+ CR+HK +LAE +L L+ N G YVLLSNIY+ + W D ++R ++
Sbjct: 467 AIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLV 526
Query: 462 GDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVL 521
+GI+K G S VE+ G H F VGD SHP ++IYS L +L K++ AG+VP T VL
Sbjct: 527 KTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVL 586
Query: 522 FDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGRE 581
D++EEEK L HSEKLA+AF L+ + P VI + KNLRVC DCH AIKLI+KI RE
Sbjct: 587 HDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQRE 646
Query: 582 IIVRDNNRFHCFIEGSCSCKDFW 604
IIVRD RFH F +GSCSC D+W
Sbjct: 647 IIVRDLQRFHHFKDGSCSCGDYW 669
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI + N A+ Y M N G + N T +L ACA Q G H+ +V+
Sbjct: 266 MIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVR 325
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
GL+ + +V TS++++Y CG + A K F I +KN++SW+A+I+GY G+ +EA+++
Sbjct: 326 MGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDI 385
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYA 177
F + G P+ + + VL AC+ G L + W + G V +VDL
Sbjct: 386 FNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLG 445
Query: 178 KCGNMEKARRVFDQMPEK-DIVSWSSMIQG 206
+ G +++A + +M K D W +++
Sbjct: 446 RAGCLDEAYGLIKEMKVKPDAAIWGALLSA 475
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 117/312 (37%), Gaps = 48/312 (15%)
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
SWS+ + S+G P AL F R N + A A+ +L G
Sbjct: 56 SWSAAVGDLLSSGDPVAALAAFAAALRVNPAALRPALPPAFRAAAAATSLAAGRQLHLLA 115
Query: 259 ERNE-FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK-- 315
R+ F S+P + L+ MY C R A K F E+ + V+ A+ SG N V
Sbjct: 116 IRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPS 175
Query: 316 ----------------------VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE-- 351
VAF ++ CGI + + V AG+V+
Sbjct: 176 LALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTML 235
Query: 352 ------GRQFFNSMSRVF-SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM-----PMEP 399
GR+ + +VF ++ + + M+ L ++G +A L + M ++
Sbjct: 236 DAYAKGGRRDLGAARKVFDTMEKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKC 295
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKI-R 458
NA+ A+L C + + NQ++ + L N+Y + + +K R
Sbjct: 296 NAVTLSAILLACAHAGTIQTGKCIHNQVVRMG--------LEENVYVGTSVVDMYSKCGR 347
Query: 459 SMMGDKGIQKIR 470
M K QKI+
Sbjct: 348 VEMARKAFQKIK 359
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 260/687 (37%), Positives = 369/687 (53%), Gaps = 93/687 (13%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACA-----------REHDFQLGVR 51
R ++ + A Y SM + N+T+P +++AC+ H +LG
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245
Query: 52 SHSLIVKAGLDC--------------------DEFVKTSLLNLYVHCG------------ 79
S + ++C D S+L Y+ G
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305
Query: 80 -------------------YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +A K+FD++ +K++V+W+A+I+ + EEAI F
Sbjct: 306 PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFV 365
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ D V L+AC L ++ K IH + G + + +L+ +Y+KCG
Sbjct: 366 GMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG 425
Query: 181 NMEKARRVFDQ-------------------------------MPEKDIVSWSSMIQGYAS 209
++ AR++FD+ MPEKD+VSWSSMI GYA
Sbjct: 426 DIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQ 485
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
N E L +F MQ KP+ T+V V+SACA L ALE G W ++++RN N +L
Sbjct: 486 NDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVIL 545
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
GTTLIDMY KCG + A +VF M +K WNA++ GL+MNG V+ + +F ++KC +
Sbjct: 546 GTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHV 605
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
PN TF+G+L C H GLVDEG+ F SM + P ++HYGCMVDLLGR+G+L EA
Sbjct: 606 TPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAE 665
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
EL+ MPM P+ WGALL C+ H +++ V +LI L+P + G +VLLSNIY++
Sbjct: 666 ELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKG 725
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
KW+D +IR MM + KI GCS +E +GV+HEFL GD +HP + I L E+A KLK
Sbjct: 726 KWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLK 785
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
G+ P + VL D++EEEK+ L HSEKLA+AFGLI +P IRI KNLR+C DCH
Sbjct: 786 LEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHT 845
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEG 596
A KLISK R+I+VRD +RFH F +G
Sbjct: 846 AAKLISKAFCRKIVVRDRHRFHHFEQG 872
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 182/373 (48%), Gaps = 35/373 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F N+ ++ AI + M G + L ACA +G HSL +K G
Sbjct: 347 LIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIG 406
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN------------ 108
+ ++ +L+ +Y CG + A K+FD+ +++SW ++ISGY+
Sbjct: 407 TESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFD 466
Query: 109 ------------------EGNL-EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+ +L +E + +F+ + G KPD ++V V++AC +L L
Sbjct: 467 SMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQ 526
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
KW+H Y+ G NV + T+L+D+Y KCG +E A VF M EK I +W+++I G A
Sbjct: 527 GKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAM 586
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA-SSFMERNEFLSNPV 268
NG + +LDMF NM++ ++ P T +GVL AC +G ++ G S + ++ N
Sbjct: 587 NGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVK 646
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
++D+ + G++ +A ++ M D W A++ +G ++ V +L +
Sbjct: 647 HYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE- 705
Query: 328 GIQPNGNTFVGLL 340
+QP+ + F LL
Sbjct: 706 -LQPDHDGFHVLL 717
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/643 (38%), Positives = 367/643 (57%), Gaps = 60/643 (9%)
Query: 17 FYNSMRNEGFLPTN---FTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
YN R F P + PF +C D + + H++ +K G D ++
Sbjct: 5 IYNPNRTFNFSPQPPLILSKPFT--SCKTPRDLK---QLHAIFIKTGQIQDPLTAAEVIK 59
Query: 74 LYVHCGYLAD-ALKVFDDIPDKNVVSWTAIIS--GYINEGNLE-EAINMFRRLLHRG-LK 128
D A VF +P+ N W I+ N+ +L+ EA+ +F +L G +K
Sbjct: 60 FCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVK 119
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC--------- 179
P+ F+ VL AC + L K IHG + + G + FV ++LV +Y C
Sbjct: 120 PNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSL 179
Query: 180 --------------------------------------GNMEKARRVFDQMPEKDIVSWS 201
G+++ A+ +FD+MP++ +VSW+
Sbjct: 180 FCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWN 239
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
MI GYA NG EA+++F MQ N+ P Y T+V VL A A +GALELG W + +N
Sbjct: 240 VMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN 299
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ + VLG+ L+DMY+KCG + +A +VF + ++ + W+A++ +M+G + A F
Sbjct: 300 KIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHF 359
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
+ K G+ PN ++G+L C+HAGLV+EGR FF+ M +V L P IEHYGCMVDLLGR
Sbjct: 360 HLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 419
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+G L+EA ELI++MP+EP+ ++W ALL C++HK + E V L+ L P +SG+YV L
Sbjct: 420 AGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVAL 479
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
SN+Y++ W A++R M I+K GCSW+E+ G++HEFLV D+SH +++I + L
Sbjct: 480 SNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAML 539
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
E++ KL++ G+ P T V + +E+E+ L HSEK+A+AFGLI+TAP+ ++I KNL
Sbjct: 540 GEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNL 599
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH ++KLIS I R+IIVRD RFH F GSCSC D+W
Sbjct: 600 RICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N F AI + M++ P T VL A AR +LG H K
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNK 300
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D+ + ++L+++Y CG + +AL+VF+ +P +N ++W+AII + G E+AI F
Sbjct: 301 IEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFH 360
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVATSLVDLYAKC 179
+ G+ P+ + + +L+AC+ G + + + V G + +VDL +
Sbjct: 361 LMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRA 420
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G++E+A + MP E D V W +++
Sbjct: 421 GHLEEAEELIRNMPIEPDDVIWKALL 446
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/598 (41%), Positives = 359/598 (60%), Gaps = 55/598 (9%)
Query: 7 SNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEF 66
SND + F + + P FTFP V KAC R + G + H L VK GLD
Sbjct: 89 SNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDS--- 145
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 126
D+ VVS ++ Y++ G +E+A +F R +
Sbjct: 146 --------------------------DEFVVS--NVVRMYLSCGVMEDAHRLFYRRV--- 174
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
+ C + D + + G +V + ++D Y + G +E AR
Sbjct: 175 ----------FVDGCDGIRD--KKRRVDG---------DVVLWNVMIDGYVRIGELEVAR 213
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
+FD+MP++ +VSW+ MI GYA +G KEA+++F MQ + P Y T+V VL A + LG
Sbjct: 214 NLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLG 273
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
ALELG W + RN + VLG+ LIDMYAKCG + +A +VF + ++ V W+ +++
Sbjct: 274 ALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIA 333
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
GL+M+G K F +E+ G+ P+ T++GLL C+HAGLV+EGR FF+ M RV L
Sbjct: 334 GLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLE 393
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
P IEHYGCMVDLLGR+G L+E+ ELI +MP++P+ ++W ALL C++H ++ + V
Sbjct: 394 PRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEH 453
Query: 427 LIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLV 486
L+ L P +SG+YV LSNIY++ W AK+R MM + ++K GCSW+E+DGV+HEFLV
Sbjct: 454 LMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLV 513
Query: 487 GDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGL 546
D+SHP S+KI+S L E++ L G+ P T VL +++EE+K+ L HSEK+A+AFGL
Sbjct: 514 EDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGL 573
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I+T P+ +RI KNLR+C DCH +IKLISKI R+IIVRD RFH F+ GSCSC D+W
Sbjct: 574 ISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 109/213 (51%), Gaps = 2/213 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + F+ A+E + M+ P T VL A +R +LG H V+
Sbjct: 230 MIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNN 289
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D+ + ++L+++Y CG + AL+VF+ +P +NVV+W+ II+G G ++ ++ F
Sbjct: 290 IGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFE 349
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVATSLVDLYAKC 179
+ G+ P + + +L+AC+ G ++ +W + V +G + +VDL +
Sbjct: 350 DMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRA 409
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMIQGYASNG 211
G +E++ + MP K D V W +++ +G
Sbjct: 410 GLLEESEELILNMPIKPDDVIWKALLGACKMHG 442
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/553 (42%), Positives = 352/553 (63%), Gaps = 5/553 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ + K+ L D F+ L+ Y GY DALK+FDD+P K++VSW ++ISG+ L
Sbjct: 62 HARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGF--SRCL 119
Query: 113 EEAINMFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
++ F + +KP+ +I+ +++AC G L K+IHG+ + G V VA S
Sbjct: 120 HMSLTAFYTMKFEMSVKPNEVTILSMISACN--GALDAGKYIHGFGIKVGGTLEVKVANS 177
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
L+++Y K G++ A R+F+ +P+ + VSW+S+I +NG +E +D F M+R ++ +
Sbjct: 178 LINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQD 237
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
T++ +L AC LG +L M F + + T L+D YAK GR++ + VF
Sbjct: 238 EGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFT 297
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
E+ D+V W A+++G + +G + A +F + G++P+ TF LL C+H+GLV+E
Sbjct: 298 EVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNE 357
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G+ +FN MS V+ + P ++HY CMVDLLGR G L++A+E+I++MPMEPNA VWGALL C
Sbjct: 358 GKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGAC 417
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
R+H +L + V LI +EP + NY++LSN+YSAS W DAAK+R+++ ++G+++ G
Sbjct: 418 RVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPG 477
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
S +E H F VGD SHP +EKIYSKL+EL K++ AG+ T++VL D+EEE K+
Sbjct: 478 YSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKED 537
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
+ HSEKLA+AFGL+ + + + I KNLR+CGDCH KLIS I R II+RD RFH
Sbjct: 538 MINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFH 597
Query: 592 CFIEGSCSCKDFW 604
F +G CSC D+W
Sbjct: 598 HFSDGFCSCADYW 610
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 163/342 (47%), Gaps = 33/342 (9%)
Query: 122 LLHRGLKPDSFSIVR-----------VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
LLHR SF +VR +L A +S + IH V ++ R+ F+
Sbjct: 24 LLHR-----SFHLVRQCATPEAIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGD 78
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLK 229
LV Y K G E A ++FD MP KD+VSW+S+I G++ +L FY M+ E ++K
Sbjct: 79 QLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVK 136
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P T++ ++SAC GAL+ G + F + + +LI+MY K G + AC++
Sbjct: 137 PNEVTILSMISACN--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRL 194
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F + D + V WN++++ NG + F ++ + GI+ + T + LL C H G V
Sbjct: 195 FEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLG-V 253
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ + + + I ++D + G+L ++ + + + + W A+LA
Sbjct: 254 GKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGF-ADRVAWTAMLA 312
Query: 410 GCRLH----KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
G H + L E + N+ LEP ++V +++ SA
Sbjct: 313 GYAAHGLGREAIKLFESMANK--GLEP----DHVTFTHLLSA 348
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 7/241 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I V+N C + I+++N MR G T +L+AC +L H L+ G
Sbjct: 209 IIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTG 268
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ T+LL+ Y G L+ + VF ++ + V+WTA+++GY G EAI +F
Sbjct: 269 FGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFE 328
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAKC 179
+ ++GL+PD + +L+AC+ G ++ K ++E G V + +VDL +C
Sbjct: 329 SMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRC 388
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQRENLKPEYYTM 235
G + A V MP E + W +++ +G KE + NM E L P Y M
Sbjct: 389 GLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINM--EPLDPRNYIM 446
Query: 236 V 236
+
Sbjct: 447 L 447
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/599 (41%), Positives = 352/599 (58%), Gaps = 6/599 (1%)
Query: 7 SNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEF 66
SN FQ A+ F+N MR G P +FTF +L ACA G + H+LI K D F
Sbjct: 178 SNKPFQ-ALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPF 236
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 126
V T+LL++Y CG + A VFD++P +N+VSW ++I G++ AI +FR +L G
Sbjct: 237 VATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG 296
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
PD SI VL+AC L +L K +HG + + G V+V SLVD+Y KCG E A
Sbjct: 297 --PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDAT 354
Query: 187 RVFDQMPEKDIVSWSSMIQG-YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
++F ++D+V+W+ MI G + F ++A F M RE ++P+ + + A AS+
Sbjct: 355 KLFCGGGDRDVVTWNVMIMGCFRCRNF-EQACTYFQAMIREGVEPDEASYSSLFHASASI 413
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
AL G S + + + N + ++L+ MY KCG M A +VFRE K+ + V W A++
Sbjct: 414 AALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMI 473
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
+ +G A +F ++ G+ P TFV +L C+H G +D+G ++FNSM+ V ++
Sbjct: 474 TVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNI 533
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
P +EHY CMVDLLGR G+L+EA I+SMP EP+++VWGALL C H ++ V
Sbjct: 534 KPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAE 593
Query: 426 QLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFL 485
+L LEP N GNY+LLSNIY +A ++R +MG G++K GCSW++V F
Sbjct: 594 RLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFN 653
Query: 486 VGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFG 545
D SH +++IY L +L +K G+V T +E E+Q L CHSEKLALAFG
Sbjct: 654 ANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSEEQS-LWCHSEKLALAFG 712
Query: 546 LITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
L+ P +RI KNLR CGDCH +K S+I REIIVRD NRFH F GSCSC D+W
Sbjct: 713 LLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 209/446 (46%), Gaps = 37/446 (8%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP--D 93
+L A+ + + HS +V +LL LY CG + L +F+ P
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
NVV+WT +I+ +A+ F R+ G+ P+ F+ +L AC LS + I
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
H +++ + FVAT+L+D+YAKCG+M A VFD+MP +++VSW+SMI G+ N
Sbjct: 223 HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLY 282
Query: 214 KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
A+ +F + +L P+ ++ VLSACA L L+ G + + + + +L
Sbjct: 283 GRAIGVFREVL--SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSL 340
Query: 274 IDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+DMY KCG A K+F D+D V WN ++ G + A F + + G++P+
Sbjct: 341 VDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDE 400
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSM--------SRVFSLTPMIEHYGCMVDLLGRSGQL 385
++ L + +G + + SR+ S +V + G+ G +
Sbjct: 401 ASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISS---------SLVTMYGKCGSM 451
Query: 386 DEAHELIKSMPMEPNAIVWGALLA-----GCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
+A+++ + E N + W A++ GC ++ L E +LN+ + E Y+
Sbjct: 452 LDAYQVFRETK-EHNVVCWTAMITVFHQHGCA-NEAIKLFEEMLNEGVVPE------YIT 503
Query: 441 LSNIYSA-SH--KWNDAAKIRSMMGD 463
++ SA SH K +D K + M +
Sbjct: 504 FVSVLSACSHTGKIDDGFKYFNSMAN 529
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 7/241 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G F+ A ++ +M EG P ++ + A A G HS ++K G
Sbjct: 371 MIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTG 430
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + +SL+ +Y CG + DA +VF + + NVV WTA+I+ + G EAI +F
Sbjct: 431 HVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFE 490
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L+ G+ P+ + V VL+AC+ G + K+ + N + +VDL +
Sbjct: 491 EMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRV 550
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPEYYTM 235
G +E+A R + MP E D + W +++ +A+ +E + + ++ +N P Y +
Sbjct: 551 GRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDN--PGNYML 608
Query: 236 V 236
+
Sbjct: 609 L 609
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 243/632 (38%), Positives = 376/632 (59%), Gaps = 53/632 (8%)
Query: 22 RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLD--CDEFVKTSLLNLYVHCG 79
R+ + + F+L++CARE +G R H+ I+ G+ + F+ +LL Y CG
Sbjct: 5 RHTALSSVSRHYRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCG 64
Query: 80 YLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
A KVFD+IP K+ V WT ++ ++ +EA+ +F + G+KPD ++V +
Sbjct: 65 CAWQARKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCL 124
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR---------- 187
C +LGD+ HG + + G G +++D+YAK G M +ARR
Sbjct: 125 FGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSV 184
Query: 188 ---------------------VFDQMPEKDIVSWSSMIQGYASNGFPKEAL----DMFYN 222
VFD+MPE++ V+W+ MI GY +G +E+ +M ++
Sbjct: 185 VSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFD 244
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSF-MERNEFLSNPVLGTTLIDMYAKCG 281
++ E Y T+ +L+AC+ G L +G W ++ ++ E N ++GT ++DMYAKCG
Sbjct: 245 LEME---LNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCG 301
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
R+ A K F++M ++ V WNA++SGL+M+G + A +F Q+ K +P+ TF +L
Sbjct: 302 RIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFK-EAKPDDVTFTSVLS 360
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C+H+GLVD+G +F ++ V+ +TP +EHY CMVDLLGR+G+L+EA L++ MP+ PN
Sbjct: 361 ACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNE 420
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMM 461
+V G+LL C +H K L EH+L +L+ L+P N+ ++LLSN+Y+ + K N A +R ++
Sbjct: 421 VVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVL 480
Query: 462 GDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVL 521
+GI+K+ G S + V G VH+F GD SHP + ++Y+ LDE+ +L+ AG+ P T
Sbjct: 481 KKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQT 540
Query: 522 FD---------IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIK 572
F +E+EEK+ L HSEKLA+ FGLI+T P + I KNLR+C DCH AIK
Sbjct: 541 FAGCDSLEDDLVEQEEKEQALFSHSEKLAICFGLISTGPGVPLHIFKNLRICQDCHSAIK 600
Query: 573 LISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
++SKI REI++RD NRFHCF EGSCSC D+W
Sbjct: 601 IVSKIYNREIVIRDRNRFHCFKEGSCSCCDYW 632
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 181/355 (50%), Gaps = 36/355 (10%)
Query: 5 FVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCD 64
FV ++ A+ + MR G P T + CAR D +G + H +VK GL
Sbjct: 93 FVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGV 152
Query: 65 EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
E +++++Y G + +A +VF ++ ++VVSWT I+ G I + +F +
Sbjct: 153 EKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPE 212
Query: 125 R---------------GLKPDSFSIVR-----------------VLTACTQLGDLSTAKW 152
R GL +SF++VR +LTAC+Q GDL +W
Sbjct: 213 RNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRW 272
Query: 153 IHGY-VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+H Y + K N+ V T++VD+YAKCG + A + F +MP++++VSW++M+ G A +G
Sbjct: 273 VHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHG 332
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG- 270
+ ALD+F M +E KP+ T VLSAC+ G ++ G + +E ++ V
Sbjct: 333 LGRAALDIFPQMFKEA-KPDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHY 391
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
++D+ + GR+ +A + REM + ++VV +++ S++G +++ + +L
Sbjct: 392 ACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQEL 446
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/589 (40%), Positives = 353/589 (59%), Gaps = 37/589 (6%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLY--VHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ I++ GL +V T L+ + V + L VF + N WTA+I GY +G
Sbjct: 62 HAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQG 121
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVA 169
L E+ N + R+ G+ P SF+ + AC ++ K +H + G +++V
Sbjct: 122 LLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVG 181
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS---------------------------- 201
S++DLY KCG + AR+VFD+M E+D+VSW+
Sbjct: 182 NSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMV 241
Query: 202 ---SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+M+ GYA NG PKEAL+ F MQ ++ + T+ GV+SACA LGA++ W
Sbjct: 242 AWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIA 301
Query: 259 ERNEF--LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
ER+ F N V+G+ LIDMY+KCG +A KVF MK+++ +++++ G +M+G
Sbjct: 302 ERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHS 361
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A +F + K I+PN TF+G+L C+HAGLV++GRQ F M + F + P +HY CMV
Sbjct: 362 ALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMV 421
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSG 436
DLLGR+G L+EA +L+K+MPMEPN VWGALL CR+H D+A+ N+L LEP G
Sbjct: 422 DLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIG 481
Query: 437 NYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE-VDGVVHEFLVGDNSHPLSE 495
NY+LLSNIY+++ +W + +K+R ++ +KG +K GCSW E +G +H+F GD +HP S
Sbjct: 482 NYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSS 541
Query: 496 KIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVI 555
+I L +L +L++ G+ P +D+ ++EK+ L HSEKLALA+GL+ T D I
Sbjct: 542 EIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTI 601
Query: 556 RIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+I KN+R+C DCH + S+ITGREIIVRDN RFH F G+CSC +FW
Sbjct: 602 KIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 197/369 (53%), Gaps = 38/369 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHS-LIVKA 59
MIRG+ + FY MR +G P +FTF + KAC + LG + H+ I+
Sbjct: 113 MIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIG 172
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------ 89
G D +V S+++LYV CG+L A KVFD
Sbjct: 173 GFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLF 232
Query: 90 -DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
D+P K++V+WTA+++GY G +EA+ F+++ G++ D ++ V++AC QLG +
Sbjct: 233 DDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVK 292
Query: 149 TAKWIHGYVNEAGKGR--NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
A WI +G G NV V ++L+D+Y+KCG+ ++A +VF+ M E+++ S+SSMI G
Sbjct: 293 HANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILG 352
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS- 265
YA +G AL +F++M + ++P T +G+LSAC+ G +E G + ME+ ++
Sbjct: 353 YAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAP 412
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+P ++D+ + G + +A + + M + + VW A++ ++G +A +L
Sbjct: 413 SPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANEL 472
Query: 325 EKCGIQPNG 333
K ++PNG
Sbjct: 473 FK--LEPNG 479
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/616 (39%), Positives = 355/616 (57%), Gaps = 38/616 (6%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALK 86
P ++ + + R + +LG ++H+ IV GL + F+ ++ +Y G L A+
Sbjct: 74 FPHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVV 133
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEA---INMFRRLLHRGLKPDSFSIVRVLTACTQ 143
VFD I + + + + +II Y G + + R+ GL D+F++ VL +C
Sbjct: 134 VFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCAD 193
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD------- 196
L + + +HG G + +V SL+D+Y KCG + AR++FD+M +D
Sbjct: 194 LSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNAL 253
Query: 197 ------------------------IVSWSSMIQGYASNGFPKEALDMFYNMQRE--NLKP 230
IVSW++MI GY NGF ++AL +F M ++ +KP
Sbjct: 254 IAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKP 313
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA--CK 288
+ T+V VL ACA ALE G F N + T L MYAKC + +A C
Sbjct: 314 NWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCF 373
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
K+ + WN +++ + +G A +F + + G+QP+ TF+GLL GC+H+GL
Sbjct: 374 DMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGL 433
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
+D G FN M + S+ P +EHY C+VDLLGR+G+L EA ELI MPM+ VWGALL
Sbjct: 434 IDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALL 493
Query: 409 AGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQK 468
A CR H+ ++AE +L LEP NSGNYVLLSN+Y+ + W + K+R+++ +G++K
Sbjct: 494 AACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKK 553
Query: 469 IRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEE 528
GCSW+E++G H F+ D SHP +++IY L+ L K+K AG++P T VL DI EEE
Sbjct: 554 SPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEE 613
Query: 529 KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNN 588
K+Y L HSEKLA+AFGL+ T P V+R+ KNLR+CGDCH A K ISKI REIIVRD N
Sbjct: 614 KEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLN 673
Query: 589 RFHCFIEGSCSCKDFW 604
RFHCF +GSCSC D+W
Sbjct: 674 RFHCFKDGSCSCGDYW 689
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 177/342 (51%), Gaps = 41/342 (11%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
+E Y M G L NFT PFVLK+CA +G H ++ GL+ D +V SL+++
Sbjct: 166 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 225
Query: 75 YVHCGYLADALKVFDD-------------------------------IPDKNVVSWTAII 103
YV CG + DA K+FD + +N+VSWTA+I
Sbjct: 226 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 285
Query: 104 SGYINEGNLEEAINMFRRLLHRG--LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG 161
SGY G E+A+ +F +L G +KP+ +IV VL AC Q L + IH + N G
Sbjct: 286 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 345
Query: 162 KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE--KDIVSWSSMIQGYASNGFPKEALDM 219
N V T+L +YAKC ++ +AR FD + + K++++W++MI YAS+G EA+ +
Sbjct: 346 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 405
Query: 220 FYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS-NPVLG--TTLIDM 276
F NM R ++P+ T +G+LS C+ G ++ G+ + F + S P + ++D+
Sbjct: 406 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGL--NHFNDMGTIHSVEPRVEHYACVVDL 463
Query: 277 YAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
+ GR+ +A ++ +M VW A+++ + +++A
Sbjct: 464 LGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIA 505
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G+ N + A+ ++ M +G P T VL ACA+ + G R H
Sbjct: 284 MISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANG 343
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAI 116
GL + V+T+L +Y C L +A FD I KN+++W +I+ Y + G EA+
Sbjct: 344 IGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAV 403
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS----L 172
++F +L G++PD+ + + +L+ C+ G + + N+ G +V +
Sbjct: 404 SIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGL---NHFNDMGTIHSVEPRVEHYACV 460
Query: 173 VDLYAKCGNMEKARRVFDQMP 193
VDL + G + +A+ + QMP
Sbjct: 461 VDLLGRAGRLVEAKELISQMP 481
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/591 (40%), Positives = 348/591 (58%), Gaps = 3/591 (0%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
F + + G++P FT ++ CA LG HS ++++GL D V SL+++Y
Sbjct: 249 FLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYA 308
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGN--LEEAINMFRR-LLHRGLKPDSFS 133
CG + +A KVFD + + NV+SWTA+++GY+ G EA+ MF LL G+ P+ F+
Sbjct: 309 KCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFT 368
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
VL AC L D + +HG + G V LV +YAK G ME AR+ FD +
Sbjct: 369 FSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLF 428
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
EK++VS + + + D+ ++ +T +LS A +G + G
Sbjct: 429 EKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQ 488
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ + + F ++ + LI MY+KCG A +VF +M+D + + W ++++G + +G+
Sbjct: 489 IHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGF 548
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
A +F + + G++PN T++ +L C+H GL+DE + F SM + P +EHY
Sbjct: 549 ASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYA 608
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
CMVDLLGRSG L EA E I SMP + +A+VW L CR+H+ T L EH ++ EP
Sbjct: 609 CMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPH 668
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPL 493
+ Y+LLSN+Y+ +W D A IR M K I K G SW+EV+ VH+F VGD HP
Sbjct: 669 DPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPK 728
Query: 494 SEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKD 553
+++IY KLDELA K+K G+VP TD VL D+E+E+K+ +L HSEKLA+AF LI+T
Sbjct: 729 AQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPK 788
Query: 554 VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IR+ KNLRVCGDCH AIK IS ++GREI+VRD NRFH +G+CSC D+W
Sbjct: 789 PIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 217/427 (50%), Gaps = 19/427 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMR-NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I F +N A+E ++ + +G P + F V++AC + F+ G+ ++K
Sbjct: 126 IISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKT 185
Query: 60 G-LDCDEFVKTSLLNLYVHCGYLAD---ALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
G D V L++++V LAD A KVFD + +KNVV+WT +I+ G +EA
Sbjct: 186 GYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEA 245
Query: 116 INMFRRLL-HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
I++F +L G PD F++ +++ C ++ LS K +H +V +G ++ V SLVD
Sbjct: 246 IDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVD 305
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY--ASNGFPKEALDMFYNMQRE-NLKPE 231
+YAKCG +++AR+VFD M E +++SW++++ GY G+ +EA+ MF NM + + P
Sbjct: 306 MYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPN 365
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
+T GVL ACASL + G + + +G L+ +YAK GRM A K F
Sbjct: 366 CFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFD 425
Query: 292 EMKDK----DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+ +K + VV + V ++N + ++E G + T+ LL G G
Sbjct: 426 VLFEKNLVSETVVDDTNVKDFNLNSEQDLD----REVEYVGSGVSSFTYASLLSGAACIG 481
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+ +G Q + ++ T + + ++ + + G + A ++ M + N I W ++
Sbjct: 482 TIGKGEQIHAMVVKIGFRTDLSVN-NALISMYSKCGNKEAALQVFNDME-DCNVITWTSI 539
Query: 408 LAGCRLH 414
+ G H
Sbjct: 540 INGFAKH 546
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 193/370 (52%), Gaps = 12/370 (3%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T +LK C R + LG H + + L D + SL+ LY A +F +
Sbjct: 54 TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113
Query: 92 PD--KNVVSWTAIISGYINEGNLEEAINMFRRLL-HRGLKPDSFSIVRVLTACTQLGDLS 148
+ ++VVS+++IIS + N N +A+ MF +LL G+ P+ + V+ AC + G
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173
Query: 149 TAKWIHGYVNEAGK-GRNVFVATSLVDLYAK---CGNMEKARRVFDQMPEKDIVSWSSMI 204
T + G+V + G +V V L+D++ K ++E AR+VFD+M EK++V+W+ MI
Sbjct: 174 TGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMI 233
Query: 205 QGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
A G+ EA+D+F M P+ +T+ G++S CA + L LG S++ R+
Sbjct: 234 TRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGL 293
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM--NGYVKVAFGVF 321
+ + +G +L+DMYAKCG + +A KVF M++ + + W A+V+G GY + A +F
Sbjct: 294 VLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMF 353
Query: 322 GQ-LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
L + G+ PN TF G+L C D G Q ++ L+ + +V +
Sbjct: 354 SNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKL-GLSAIDCVGNGLVSVYA 412
Query: 381 RSGQLDEAHE 390
+SG+++ A +
Sbjct: 413 KSGRMESARK 422
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/604 (40%), Positives = 356/604 (58%), Gaps = 28/604 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ N AIE + MR EG FTFP +L AC G + H IV++G
Sbjct: 211 MVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSG 270
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV ++L+++Y CG L++A ++ + + + VSW ++I G + +G EEA+++FR
Sbjct: 271 FGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFR 330
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ R +K D F+ VL + + D+ A +H + + G V +LVD+YAK G
Sbjct: 331 IMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRG 390
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A VF++M +KD++SW+S++ G NG +EAL +F M+ + P+ + VLS
Sbjct: 391 YFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLS 450
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA L LE G + ++ S+ + +L+ MYAKCG + A KVF M+ +D +
Sbjct: 451 ACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVIT 510
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ G + NG G HAGLV+ GR +F SM
Sbjct: 511 WTALIVGYAQNGR----------------------------GRDHAGLVEHGRSYFQSME 542
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V+ + P EHY CM+DLLGRSG+L EA EL+ M ++P+A VW ALLA CR+H +L
Sbjct: 543 EVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELG 602
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E N L LEP N+ YVLLSN+YSA+ KW +AAK R +M +G+ K GCSW+E+
Sbjct: 603 ERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSK 662
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F+ D SHP + +IYSK+DE+ +K AG+VP + L D++EE K+ LA HSEKL
Sbjct: 663 VHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKL 722
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL+T P IRI KNLR+CGDCH A+K +S + R +I+RD+N FH F EG+CSC
Sbjct: 723 AVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSC 782
Query: 601 KDFW 604
D+W
Sbjct: 783 SDYW 786
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 217/411 (52%), Gaps = 3/411 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ C A+E + M+ EG P FT+ VL+ C+ + G + H+ +K
Sbjct: 109 LISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQ 168
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMF 119
D + FV T L+++Y C + +A +F+ PDK N V WTA+++GY G+ +AI F
Sbjct: 169 FDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECF 228
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R + G++ + F+ +LTAC + +HG + +G G NVFV ++LVD+Y+KC
Sbjct: 229 RDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKC 288
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ ARR+ + M D VSW+SMI G G +EAL +F M ++K + +T VL
Sbjct: 289 GDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVL 348
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+ + + + + S + + F + ++ L+DMYAK G A VF +M DKD +
Sbjct: 349 NCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVI 408
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W ++V+G NG + A +F ++ GI P+ +L C +++ G+Q +
Sbjct: 409 SWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANF 468
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ L + +V + + G +++A+++ SM ++ + I W AL+ G
Sbjct: 469 LKS-GLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQ-DVITWTALIVG 517
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 183/360 (50%), Gaps = 21/360 (5%)
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
D DE +++ Y + G L +A K+F + P ++ ++W+++ISGY G EA+ +F
Sbjct: 69 DRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWE 128
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ + G +P+ F+ VL C+ L K IH + + N FV T LVD+YAKC
Sbjct: 129 MQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC 188
Query: 182 MEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +A +F+ P+K + V W++M+ GY+ NG +A++ F +M+ E ++ +T +L+
Sbjct: 189 ILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILT 248
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC S+ A G + R+ F +N +G+ L+DMY+KCG ++ A ++ M+ D V
Sbjct: 249 ACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVS 308
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN+++ G G + A +F + ++ + T+ +L C F M
Sbjct: 309 WNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVL-NCF---------SFVMDMR 358
Query: 361 RVFSLTPMIEHYG---------CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
S+ +I G +VD+ + G D A ++ + M + + I W +L+ GC
Sbjct: 359 NAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMT-DKDVISWTSLVTGC 417
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 141/292 (48%), Gaps = 17/292 (5%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGK---GRNVFVA---------TSLVDLYAKCGN 181
I R + +C + S + W+ +++ G+ R +F +++ YA G
Sbjct: 28 IRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGR 87
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ +AR++F + P + ++WSS+I GY G EAL++F+ MQ E +P +T VL
Sbjct: 88 LNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRV 147
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQVV 300
C+ LE G + + +F SN + T L+DMYAKC + +A +F DK + V+
Sbjct: 148 CSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVL 207
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A+V+G S NG A F + GI+ N TF +L C G Q +
Sbjct: 208 WTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIV 267
Query: 361 RV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
R F + +VD+ + G L A ++++M ++ + + W +++ GC
Sbjct: 268 RSGFGANVFVG--SALVDMYSKCGDLSNARRMLETMEVD-DPVSWNSMIVGC 316
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/639 (38%), Positives = 373/639 (58%), Gaps = 48/639 (7%)
Query: 14 AIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+E ++ M NE GF P + T VL CA LG + H V + + + FV L+
Sbjct: 212 ALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLV 271
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF------------- 119
++Y G + +A VF ++P K+VVSW A+++GY G E+A+ +F
Sbjct: 272 DMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVV 331
Query: 120 ----------------------RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY- 156
R++L G+KP+ +++ VL+ C +G L K IH Y
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 157 ------VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYA 208
+ + G G V L+D+YAKC ++ AR +FD + E+D+V+W+ MI GY+
Sbjct: 392 IKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 209 SNGFPKEALDMFYNMQREN--LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
+G +AL++ M E+ +P +T+ L ACASL AL +G ++ RN+ +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAV 511
Query: 267 PV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
P+ + LIDMYAKCG + A VF M +K++V W ++++G M+GY + A G+F ++
Sbjct: 512 PLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMR 571
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
+ G + +G T + +L C+H+G++D+G ++FN M F ++P EHY C+VDLLGR+G+L
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRL 631
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
+ A LI+ MPMEP +VW ALL+ CR+H K +L E+ ++ L N G+Y LLSN+Y
Sbjct: 632 NAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMY 691
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ + +W D +IRS+M KGI+K GCSWVE F VGD +HP +++IY L +
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHM 751
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
++K G+VP T L D+++EEK L HSEKLALA+G++TT IRI KNLRVCG
Sbjct: 752 QRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCG 811
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH A +S+I EII+RD++RFH F G CSCK +W
Sbjct: 812 DCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 147/496 (29%), Positives = 238/496 (47%), Gaps = 49/496 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + +N + + M + + P N+TFPFV KAC + G SH+L G
Sbjct: 98 LIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTG 157
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +L+ +Y CG L+DA KVFD++P +VVSW +II Y G + A+ MF
Sbjct: 158 FMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFS 217
Query: 121 RLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ + G +PD ++V VL C +G S K HG+ + +N+FV LVD+YAK
Sbjct: 218 KMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKF 277
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN------------ 227
G M++A VF MP KD+VSW++M+ GY+ G ++A+ +F MQ E
Sbjct: 278 GMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAI 337
Query: 228 -----------------------LKPEYYTMVGVLSACASLGAL----ELGVWASSF--- 257
+KP T++ VLS CAS+GAL E+ +A +
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMD 397
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM--KDKDQVVWNAVVSGLSMNGYVK 315
+ +N ++ LIDMYAKC ++ A +F + K++D V W ++ G S +G
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 316 VAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
A + ++ E C +PN T L C + G+Q R +
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSN 517
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
C++D+ + G + +A + +M ME N + W +L+ G +H + A + ++ + +
Sbjct: 518 CLIDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIG-F 575
Query: 434 NSGNYVLLSNIYSASH 449
LL +Y+ SH
Sbjct: 576 KLDGVTLLVVLYACSH 591
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 194/407 (47%), Gaps = 47/407 (11%)
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
+ + L++ Y+ G L+ A+ + P D V W ++I Y N G + ++ F +
Sbjct: 61 LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHS 120
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
PD+++ V AC ++ + H G NVFV +LV +Y++CG++
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSD 180
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACA 243
AR+VFD+MP D+VSW+S+I+ YA G PK AL+MF M E +P+ T+V VL CA
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
S+G LG F +E + N +G L+DMYAK G M +A VF M KD V WNA
Sbjct: 241 SVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNA 300
Query: 304 VVSGLS------------------------------MNGYVKV-----AFGVFGQLEKCG 328
+V+G S ++GY + A GV Q+ G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-------CMVDLLGR 381
I+PN T + +L GC G + G++ + + + + +G ++D+ +
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKE-IHCYAIKYPMDLRKNGHGDENMVINQLIDMYAK 419
Query: 382 SGQLDEAHELIKSM-PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
++D A + S+ P E + + W ++ G H + A +L+++
Sbjct: 420 CKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 130/301 (43%), Gaps = 41/301 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G+ + A+E + M E P FT L ACA +G + H+ ++
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALR 505
Query: 59 AGLDCDE-FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
+ FV L+++Y CG + DA VFD++ +KN V+WT++++GY G EEA+
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLY 176
+F + G K D +++ VL AC+ G + ++ + + G LVDL
Sbjct: 566 IFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLL 625
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+ G + A R+ ++MP ++P V
Sbjct: 626 GRAGRLNAALRLIEEMP----------------------------------MEPPPVVWV 651
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI-DMYAKCGRMAQACKVFREMKD 295
+LS C G +ELG +A+ + E SN TL+ +MYA GR ++ M+
Sbjct: 652 ALLSCCRIHGKVELGEYAAK--KITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRH 709
Query: 296 K 296
K
Sbjct: 710 K 710
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/606 (39%), Positives = 361/606 (59%), Gaps = 6/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G + N+ A++ ++ R + T+ V+K CA L + HS ++K G
Sbjct: 273 LMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHG 332
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
D V T++++ Y CG L DA +F +P +NVVSWTA+I G I ++ A +F
Sbjct: 333 FHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALF 392
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ +KP+ F+ VLTA + IH + + V T+L+ Y+K
Sbjct: 393 SRMREDNVKPNEFTYSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGTALLASYSKL 448
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN E+A +F + KD+V+WS+M+ Y+ G A ++F M + +KP +T+ +
Sbjct: 449 GNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAI 508
Query: 240 SACASLGA-LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
ACAS A ++ G + + + +G+ L+ MYA+ G + A VF D+D
Sbjct: 509 DACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDL 568
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WN+++SG + +GY K A F Q+E GI+ +G TF+ ++ GCTHAGLV EG+Q+F+S
Sbjct: 569 VSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDS 628
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M +++P +EHY CMVDL R+G+LDE LI+ MP A+VW LL CR+HK +
Sbjct: 629 MVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVE 688
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L + +L+ LEP +S YVLLSNIY+A+ +W + ++R +M K ++K GCSW+++
Sbjct: 689 LGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIK 748
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F+ D SHPLSE+IY+KL + T+LK G+ P T VL DI EE+K+ L HSE
Sbjct: 749 NKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSE 808
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LALAFGLI T P+ ++I KNLRVCGDCH +K++S I REII+RD +RFH F G+C
Sbjct: 809 RLALAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGAC 868
Query: 599 SCKDFW 604
SC DFW
Sbjct: 869 SCGDFW 874
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 210/430 (48%), Gaps = 10/430 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+V + + MR EG P FTF VL A A + LG R H+ VK G
Sbjct: 172 LLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFG 231
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
FV SL+N+Y CG + +A VF + +++VSW +++G + + EA+ +F
Sbjct: 232 CRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFH 291
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
K + V+ C L L+ A+ +H V + G + V T+++D Y+KCG
Sbjct: 292 DSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCG 351
Query: 181 NMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A +F MP +++VSW++MI G N A +F M+ +N+KP +T VL
Sbjct: 352 ELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVL 411
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+ AS+ L + A + + + P +GT L+ Y+K G +A +F+ + KD V
Sbjct: 412 T--ASIPILLPQIHAQ--IIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVV 467
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL--CGCTHAGLVDEGRQFFN 357
W+A++S S G A VF ++ G++PN T + C AG +D+GRQ F+
Sbjct: 468 AWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAG-IDQGRQ-FH 525
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
++S + I +V + R G +D A ++ + + + W ++++G H +
Sbjct: 526 AISIKYRYQDAICVGSALVTMYARKGSIDSA-RIVFERQTDRDLVSWNSMISGYAQHGYS 584
Query: 418 DLAEHVLNQL 427
A Q+
Sbjct: 585 KEALDTFRQM 594
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 211/440 (47%), Gaps = 36/440 (8%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLD 62
RG + H ++ + R +G + VLK C D G + H L VK G D
Sbjct: 77 RGKGRGEALDHFVDVHRCGRVQGAAVSR-----VLKVCGLIPDRVSGEQLHCLCVKCGFD 131
Query: 63 CDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
E V T+L+++Y+ CG + D VF+ +P +NVV+WT++++GY+ + + +F R
Sbjct: 132 RAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFR 191
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ G+ P+ F+ VL+A G + + +H + G VFV SL+++Y+KCG
Sbjct: 192 MRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGL 251
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+E+A+ VF QM +D+VSW++++ G N EAL +F++ + K T V+
Sbjct: 252 VEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKL 311
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV- 300
CA+L L L S + ++ F S+ + T ++D Y+KCG + A +F M VV
Sbjct: 312 CANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVS 371
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF-------VGLLCGCTHAGLVDE-- 351
W A++ G N + +A +F ++ + ++PN T+ + +L HA ++
Sbjct: 372 WTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQIIKTNY 431
Query: 352 ------GRQFFNSMSRV------FSLTPMIEH-----YGCMVDLLGRSGQLDEAHELIKS 394
G S S++ S+ MI+H + M+ ++G D A +
Sbjct: 432 QHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIK 491
Query: 395 MPME---PNAIVWGALLAGC 411
M M+ PN + + C
Sbjct: 492 MSMQGMKPNEFTISSAIDAC 511
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/487 (46%), Positives = 320/487 (65%), Gaps = 4/487 (0%)
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC-- 179
+L R P+ F+ VL AC +G+L+ K +HG V + G G V V +LV +Y C
Sbjct: 1 MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60
Query: 180 --GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
G +E AR+VFD+M + D VSWS+MI GY G +A+++F MQ + + P+ TMV
Sbjct: 61 GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVS 120
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
VLSAC LGALELG W S++E+ N L LIDM+AKCG + +A +FR M++++
Sbjct: 121 VLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERN 180
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V W +V+ GL+M+G A VF ++ + G+ P+ F+GLL C+H+GLVD+G+++F+
Sbjct: 181 IVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFD 240
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
SM + FS+ P IEHYGCMVD+L R+G + EA + ++ MP++PN +VW L+ CR H +
Sbjct: 241 SMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGEL 300
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
L E + QLI EP + NYVLLSNIY+ W +IR M KG++KI G + +E+
Sbjct: 301 KLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIEL 360
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
D ++EF+ GD SH S++IY +DE+ ++K AG++PTT VL DI++E+K+ L HS
Sbjct: 361 DNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHS 420
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EKLA+AF L+ T P +IRI KNLRVC DCH A K ISKI REI+VRD NRFH F G
Sbjct: 421 EKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGL 480
Query: 598 CSCKDFW 604
CSC+DFW
Sbjct: 481 CSCRDFW 487
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 178/305 (58%), Gaps = 8/305 (2%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC----GYLA 82
LP FT+PFVLKACA + LG H ++K G + V+ +L+++Y C G +
Sbjct: 7 LPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIE 66
Query: 83 DALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT 142
A KVFD++ + VSW+A+I GY+ G +AIN+FR + +G+ PD ++V VL+ACT
Sbjct: 67 FARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACT 126
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
LG L KW+ YV + +NV ++ +L+D++AKCG+++KA +F M E++IVSW+S
Sbjct: 127 GLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTS 186
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
+I G A +G EA+ +F M R + P+ +G+LSAC+ G ++ G M R +
Sbjct: 187 VIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSM-RKD 245
Query: 263 FLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFG 319
F P + ++DM + G + +A K +EM D + VVW +++ +G +K+
Sbjct: 246 FSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEK 305
Query: 320 VFGQL 324
+ QL
Sbjct: 306 ITRQL 310
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 38/298 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V AI + M+ +G P T VL AC +LG S + K
Sbjct: 86 MIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKER 145
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + + +L++++ CG + A +F + ++N+VSWT++I G G EA+ +F
Sbjct: 146 VQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFE 205
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ PD + +L+AC+ G + KG+ F
Sbjct: 206 EMVRSGVTPDDVVFIGLLSACSHSGLVD-------------KGKRYF------------- 239
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ R+ F +P+ I + M+ G KEAL M + P +++
Sbjct: 240 --DSMRKDFSIVPK--IEHYGCMVDMLCRAGLVKEALKFVQEMP---IDPNPVVWRTLIN 292
Query: 241 ACASLGALELGVWASSFMERNEFL--SNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
AC + G L+LG + + RNE + SN VL L ++YAK + ++ M K
Sbjct: 293 ACRAHGELKLGEKITRQLIRNEPMHESNYVL---LSNIYAKMSDWEKKTRIREAMDMK 347
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/590 (40%), Positives = 355/590 (60%), Gaps = 42/590 (7%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ +++ GL + L Y G+L ++ +F P+ NV WT II+ + +
Sbjct: 43 HAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLF 102
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
A++ + ++L ++P++F++ +L ACT L A+ +H + + G +++V+T L
Sbjct: 103 HHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSHAIKFGLSSHLYVSTGL 158
Query: 173 VDLYAKCGNMEKARRVFDQMPE-------------------------------KDIVSWS 201
VD YA+ G++ A+++FD MPE KD+V W+
Sbjct: 159 VDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWN 218
Query: 202 SMIQGYASNGFPKEALDMFYNMQRE-------NLKPEYYTMVGVLSACASLGALELGVWA 254
MI GYA +G P EAL F M ++P T+V VLS+C +GALE G W
Sbjct: 219 VMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWV 278
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
S++E N N +GT L+DMY KCG + A KVF M+ KD V WN+++ G ++G+
Sbjct: 279 HSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFS 338
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
A +F ++ G++P+ TFV +L C HAGLV +G + F+SM + + P +EHYGC
Sbjct: 339 DEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGC 398
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWN 434
MV+LLGR+G++ EA++L++SM +EP+ ++WG LL CR+H L E + L++ +
Sbjct: 399 MVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLAS 458
Query: 435 SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLS 494
SG YVLLSN+Y+A+ W AK+RSMM G++K GCS +EV VHEF+ GD HP S
Sbjct: 459 SGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRHPRS 518
Query: 495 EKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDV 554
+ IYS L+++ LK + P TD VL DI E+EK+ L HSEKLALAFGLI+T+P
Sbjct: 519 KDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSEKLALAFGLISTSPGAA 578
Query: 555 IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I+I KNLRVC DCH +K++SKI+GR+II+RD NRFH F GSCSC+D+W
Sbjct: 579 IKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 187/380 (49%), Gaps = 47/380 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I D F HA+ +Y+ M P FT +LKAC HS +K G
Sbjct: 92 IINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSHAIKFG 147
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTA------------------- 101
L +V T L++ Y G +A A K+FD +P++++VS+TA
Sbjct: 148 LSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFE 207
Query: 102 ------------IISGYINEGNLEEAINMFRRLLHRG-------LKPDSFSIVRVLTACT 142
+I GY G EA+ FR+++ ++P+ ++V VL++C
Sbjct: 208 GMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCG 267
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
Q+G L KW+H YV G NV V T+LVD+Y KCG++E AR+VFD M KD+V+W+S
Sbjct: 268 QVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNS 327
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
MI GY +GF EAL +F+ M +KP T V VL+ACA G + G W ++
Sbjct: 328 MIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKG-WEVFDSMKDG 386
Query: 263 FLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFG 319
+ P + ++++ + GRM +A + R M+ + D V+W ++ ++ V +
Sbjct: 387 YGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEE 446
Query: 320 VFGQLEKCGIQPNGNTFVGL 339
+ L G+ +G T+V L
Sbjct: 447 IAEILVSNGLASSG-TYVLL 465
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 130/320 (40%), Gaps = 46/320 (14%)
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IH + G + + L YA G++ + +F + P ++ W+ +I +A
Sbjct: 42 IHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDL 101
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
AL + M ++P +T+ +L AC A + A F S+ + T
Sbjct: 102 FHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPARAVHSHAIKF----GLSSHLYVSTG 157
Query: 273 LIDMYAKCGRMAQACKVFREMKD-------------------------------KDQVVW 301
L+D YA+ G +A A K+F M + KD V W
Sbjct: 158 LVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCW 217
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCG-------IQPNGNTFVGLLCGCTHAGLVDEGRQ 354
N ++ G + +G A F ++ ++PN T V +L C G ++ G+
Sbjct: 218 NVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGK- 276
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ +S + + +VD+ + G L++A ++ M + + + W +++ G +H
Sbjct: 277 WVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGK-DVVAWNSMIMGYGIH 335
Query: 415 KKTDLAEHVLNQL--IALEP 432
+D A + +++ I ++P
Sbjct: 336 GFSDEALQLFHEMCCIGVKP 355
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/602 (38%), Positives = 363/602 (60%), Gaps = 1/602 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G V N + +E + M G T VL A A + LG H VKA
Sbjct: 542 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKAC 601
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +LL++Y CG L A +VF + D +VSWT+ I+ Y+ EG +AI +F
Sbjct: 602 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFD 661
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +G++PD +++ ++ AC L + +H YV + G G N+ V +L+++YAKCG
Sbjct: 662 EMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG 721
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E+AR VF ++P KDIVSW++MI GY+ N P EAL++F +MQ++ KP+ TM VL
Sbjct: 722 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLP 780
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA L AL+ G + R + S+ + L+DMYAKCG + A +F + KD +
Sbjct: 781 ACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLIS 840
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G M+G+ A F ++ GI+P+ ++F +L C+H+GL++EG +FFNSM
Sbjct: 841 WTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMR 900
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P +EHY C+VDLL R G L +A++ I+SMP++P+ +WG LL+GCR+H LA
Sbjct: 901 NECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLA 960
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V + LEP N+ YV+L+N+Y+ + KW + K+R M +G ++ GCSW+EV G
Sbjct: 961 EKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGK 1020
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+ F+ G++ HP +++I L +L +++ + +VL + ++ EK+ HSEK
Sbjct: 1021 FNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKS 1080
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFG++ P +R++KN RVCGDCHE K +SK T REI++RD+NRFH F +G CSC
Sbjct: 1081 AMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSC 1140
Query: 601 KD 602
+D
Sbjct: 1141 RD 1142
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 196/380 (51%), Gaps = 12/380 (3%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
VL+ CA + + G R HS+I+ G+ DE + L+ +YV+CG L K+FD I +
Sbjct: 375 VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
V W ++S Y GN E++++F+++ G+ + ++ VL LG + K +HG
Sbjct: 435 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
YV + G G N V SL+ Y K G +E A +FD++ E D+VSW+SMI G NGF
Sbjct: 495 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 554
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
L++F M ++ + T+V VL A A++G L LG F + F V TL+D
Sbjct: 555 GLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 614
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MY+KCG + A +VF +M D V W + ++ G A G+F +++ G++P+ T
Sbjct: 615 MYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 674
Query: 336 FVGLLCGCTHAGLVDEGRQFF-----NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
++ C + +D+GR N M +T ++++ + G ++EA
Sbjct: 675 VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVT------NALINMYAKCGSVEEARL 728
Query: 391 LIKSMPMEPNAIVWGALLAG 410
+ +P++ + + W ++ G
Sbjct: 729 VFSKIPVK-DIVSWNTMIGG 747
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/461 (29%), Positives = 235/461 (50%), Gaps = 9/461 (1%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
F+ ++ + M+ G + +TF VLK A + R H ++K G + V S
Sbjct: 451 FRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNS 510
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ Y G + A +FD++ + +VVSW ++I+G + G + +F ++L G++ D
Sbjct: 511 LIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVD 570
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
++V VL A +G+LS + +HG+ +A V + +L+D+Y+KCGN+ A VF
Sbjct: 571 LTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFV 630
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M + IVSW+S I Y G +A+ +F MQ + ++P+ YT+ ++ ACA +L+
Sbjct: 631 KMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK 690
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G S++ +N SN + LI+MYAKCG + +A VF ++ KD V WN ++ G S
Sbjct: 691 GRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQ 750
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
N A +F ++K +P+ T +L C +D+GR+ + R + +
Sbjct: 751 NSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL-- 807
Query: 371 HYGC-MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL-- 427
H C +VD+ + G L A L +P + + I W ++AG +H + A N++
Sbjct: 808 HVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRI 866
Query: 428 IALEPWNSGNYVLLSNIYSASHKWNDAAK-IRSMMGDKGIQ 467
+EP S V+L N S S N+ K SM + G++
Sbjct: 867 AGIEPDESSFSVIL-NACSHSGLLNEGWKFFNSMRNECGVE 906
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 144/317 (45%), Gaps = 18/317 (5%)
Query: 101 AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
A I+ + G+L AI + + L +S+ VL C + L K +H +
Sbjct: 341 AKINKFCEMGDLRNAIELLTKSKSYELGLNSY--CSVLQLCAEKKSLEDGKRVHSVIISN 398
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
G + + LV +Y CG++ + R++FD++ + W+ ++ YA G +E++ +F
Sbjct: 399 GISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLF 458
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
MQ+ + YT VL A+LG ++ ++ + F SN + +LI Y K
Sbjct: 459 KKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKF 518
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G + A +F E+ + D V WN++++G +NG+ +F Q+ G++ + T V +L
Sbjct: 519 GGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVL 578
Query: 341 CGCTHAGLVDEGRQFFN-------SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
+ G + GR S VFS T ++D+ + G L+ A E+
Sbjct: 579 VAWANIGNLSLGRALHGFGVKACFSEEVVFSNT--------LLDMYSKCGNLNGATEVFV 630
Query: 394 SMPMEPNAIVWGALLAG 410
M + + W + +A
Sbjct: 631 KMG-DTTIVSWTSTIAA 646
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/637 (37%), Positives = 364/637 (57%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
+I GF A+ Y ++ + P+ T ++ A + D LG + H I++
Sbjct: 109 VIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILR 168
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV--------------------- 97
G + FV + L+++Y + DA + FD++ KNVV
Sbjct: 169 LGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRL 228
Query: 98 ----------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
+WT +++G+ G EA+ +FRR+ +G+ D ++ +LTAC L L
Sbjct: 229 FEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSAL 288
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
K IH Y+ NVFV ++LVD+Y+KC +++ A VF +M K+I+SW+++I GY
Sbjct: 289 EQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGY 348
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
NG +EA+ +F MQR+ + P+ YT+ V+S+CA+L +LE G + +
Sbjct: 349 GQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYI 408
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ L+ +Y KCG + A ++F EM DQV W A+VSG + G K +F ++
Sbjct: 409 TVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAK 468
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++P+G TF+G+L C+ AG V++GR +F+SM + + P+ +HY CM+DL RSG+L E
Sbjct: 469 GVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKE 528
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E IK MPM P+AI WG LL+ CRL ++ + L+ ++P N +YVLL ++++A
Sbjct: 529 AEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAA 588
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+WN+ A++R M D+ ++K GCSW++ VH F D SHP S+ IY KL+ L +K
Sbjct: 589 KGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSK 648
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
+ G+ P VL D+ + +K + ++ HSEKLA+AFGLI + IRI KNLRVC DC
Sbjct: 649 MLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDC 708
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A K ISKITGR+I+VRD RFH F +G CSC DFW
Sbjct: 709 HNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 216/441 (48%), Gaps = 41/441 (9%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH- 124
F +LL+ H L+D +F + +++VS+ A+I+G+ G+ +A+ ++ LL
Sbjct: 73 FTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQA 132
Query: 125 -RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK----- 178
++P ++ ++ A + LGD + K H + G G N FV + LVD+YAK
Sbjct: 133 DSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVG 192
Query: 179 --------------------------CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
C +E+ARR+F+ M ++D ++W++M+ G+ NG
Sbjct: 193 DAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGL 252
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
EAL++F M+ + + + YT +L+AC +L ALE G +++ R + N +G+
Sbjct: 253 ESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSA 312
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+DMY+KC + A VFR M K+ + W A++ G NG + A VF ++++ GI P+
Sbjct: 313 LVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPD 372
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
T ++ C + ++EG Q F+ ++ V L I +V L G+ G +++AH L
Sbjct: 373 DYTLGSVISSCANLASLEEGAQ-FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLF 431
Query: 393 KSMPMEPNAIVWGALLAGC----RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
M + + W AL++G R + DL E +L + ++P +LS A
Sbjct: 432 DEMSFH-DQVSWTALVSGYAQFGRAKETIDLFEKMLAK--GVKPDGVTFIGVLSACSRAG 488
Query: 449 HKWNDAAKIRSMMGDKGIQKI 469
+ SM D GI I
Sbjct: 489 FVEKGRSYFHSMQKDHGIVPI 509
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 143/326 (43%), Gaps = 42/326 (12%)
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+ R L H P ++ + +LTA + G + A+ V +A N+F +L+ A
Sbjct: 31 ILRTLPH---PPPTYLLNHLLTAYGKAGRHARAR----RVFDAMPHPNLFTYNALLSTLA 83
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN--LKPEYYTM 235
+ +F M ++DIVS++++I G++ G +A+ ++ + + + ++P TM
Sbjct: 84 HARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITM 143
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK---------------- 279
++ A ++LG LG + R F +N +G+ L+DMYAK
Sbjct: 144 STMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDS 203
Query: 280 ---------------CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
C + +A ++F M D+D + W +V+G + NG A +F ++
Sbjct: 204 KNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRM 263
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
GI + TF +L C +++G+Q + R + +VD+ +
Sbjct: 264 RFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT-RYDDNVFVGSALVDMYSKCRS 322
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAG 410
+ A + + M + N I W AL+ G
Sbjct: 323 IKLAETVFRRMTCK-NIISWTALIVG 347
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 258/643 (40%), Positives = 385/643 (59%), Gaps = 48/643 (7%)
Query: 6 VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS-----HSLIVKAG 60
VS + A+ Y M G P +TFP +LKA A + S H+ +VK G
Sbjct: 27 VSGHGAEEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKFG 86
Query: 61 LDCDEFVKTSLLNLYVHCGYLADA--------LKVFDDIPDKNVVSWTAIISGYINEGNL 112
++ + +SL+ +Y G A A L P V W A+ISG+ G
Sbjct: 87 MESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAP----VMWNALISGHNRSGRF 142
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
E + F ++ + + V VL+AC + DL +H V E+G + V +L
Sbjct: 143 ELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENAL 202
Query: 173 VDLYAKCGNME-------------------------------KARRVFDQMPEKDIVSWS 201
VD+YA+CG+M+ +AR +FD MPE+D ++W+
Sbjct: 203 VDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWT 262
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+MI GY G ++AL+ F MQ ++ + +TMV V++ACA LGALE G WA +M R
Sbjct: 263 AMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRL 322
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ +G LIDMY+KCG + +A VF++M ++D+ W A++ GL++NG + A +F
Sbjct: 323 GIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMF 382
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ + P+ TFVG+L CTHAGLVD+GR+FF SM+ ++++P + HYGC++D+LGR
Sbjct: 383 YRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGR 442
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+G+L EA + I MPM+PN+ +WG LLA CR++ +++ E +L+ L+P NS Y+LL
Sbjct: 443 AGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILL 502
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
SN+Y+ S++W D +IR ++ +KGI+K GCS +E++G++HEF+ D SHP++++IYSKL
Sbjct: 503 SNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKL 562
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+ + T L+ AG+VP VL ++ EEEKQ L HSEKLA+ F L+T+ +IRI KNL
Sbjct: 563 ENVLTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFALLTSESNVIIRIVKNL 622
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH AIKLISK+ GRE+IVRD RFH F GSCSCKD+W
Sbjct: 623 RMCLDCHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V F+ A+E + M+ FT V+ ACA+ + G + + + G
Sbjct: 264 MIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLG 323
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+++Y CG + AL VF D+ +++ +WTAII G G EEAI+MF
Sbjct: 324 IKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFY 383
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS-LVDLYAKC 179
R+L PD + V VLTACT G + + + EA V L+D+ +
Sbjct: 384 RMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRA 443
Query: 180 GNMEKARRVFDQMPEK 195
G +++A D+MP K
Sbjct: 444 GKLKEALDTIDKMPMK 459
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 163/380 (42%), Gaps = 46/380 (12%)
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL-- 138
L+ A + D IP + + ++ +SG+ EEA+ + R+L G +PD+++ +L
Sbjct: 5 LSRARSLLDGIPHRRGRAASSSVSGH----GAEEAVAGYVRMLAGGARPDAYTFPSLLKA 60
Query: 139 ---TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD----Q 191
+ S IH +V + G N A+SL+ +YA G+ AR V +
Sbjct: 61 AAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLA 120
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
V W+++I G+ +G + + F +M R + T V VLSAC L LG
Sbjct: 121 TGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLG 180
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL--- 308
+ + + L + + L+DMYA+CG M A +F M+ + W +V+SGL
Sbjct: 181 MQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRS 240
Query: 309 -----------------------SMNGYVKV-----AFGVFGQLEKCGIQPNGNTFVGLL 340
++GYV+V A F ++ C ++ + T V ++
Sbjct: 241 GQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVV 300
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C G ++ G M R + + ++D+ + G ++ A ++ K M +
Sbjct: 301 TACAQLGALETGEWARIYMGR-LGIKMDVFVGNALIDMYSKCGSIERALDVFKDMH-NRD 358
Query: 401 AIVWGALLAGCRLHKKTDLA 420
W A++ G ++ + + A
Sbjct: 359 KFTWTAIILGLAVNGRGEEA 378
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/599 (39%), Positives = 366/599 (61%), Gaps = 4/599 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF N A+ N M+ EG T +L CA+ D GV H ++K G
Sbjct: 193 MISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG 252
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D FV +L+N+Y G L DA VFD + +++VSW +II+ Y + A+ F+
Sbjct: 253 LDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFK 312
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV-NEAGKGRNVFVATSLVDLYAKC 179
+ G++PD ++V + + +QL D ++ I G+V ++V + +LV++YAK
Sbjct: 313 GMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKL 372
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVG 237
G M A VFDQ+P KD +SW++++ GY NG EA+D YNM E + P T V
Sbjct: 373 GYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDA-YNMMEECRDTIPNQGTWVS 431
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
++ A + +GAL+ G+ + + +N + + T LID+Y KCGR+ A +F E+
Sbjct: 432 IIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDT 491
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WNA+++ L ++G + A +F + ++ + TFV LL C+H+GLVDEG++ F+
Sbjct: 492 SVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFD 551
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
M + + + P ++HYGCMVDLLGR+G L++A+EL+++MP++P+A +WGALL+ C+++
Sbjct: 552 IMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNA 611
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
+L ++L+ ++ N G YVLLSNIY+ + KW K+RS+ D+G++K G S V V
Sbjct: 612 ELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVV 671
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
F G+ +HP +IY +L L+ K+K+ G+VP V DIEE+EK+ L HS
Sbjct: 672 GSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHS 731
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
E+LA+AFG+I+T P+ IRI KNLRVCGDCH A K IS+I+ REI+VRD+NRFH F +G
Sbjct: 732 ERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDG 790
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 229/424 (54%), Gaps = 8/424 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P +TFP +LKAC D G + H + K G + D FV SL++LY G L A KV
Sbjct: 122 PDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKV 178
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F D+P K+V SW A+ISG+ GN A+ + R+ G+K D+ ++ +L C Q D+
Sbjct: 179 FVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDV 238
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
IH +V + G +VFV+ +L+++Y+K G ++ A+ VFDQM +D+VSW+S+I Y
Sbjct: 239 INGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAY 298
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL-SN 266
N P AL F MQ ++P+ T+V + S + L + F+ R E+L +
Sbjct: 299 EQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKD 358
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
V+G L++MYAK G M A VF ++ KD + WN +V+G + NG A + +E+
Sbjct: 359 VVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEE 418
Query: 327 C-GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
C PN T+V ++ +H G + +G + + + SL + C++DL G+ G+L
Sbjct: 419 CRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIK-NSLYLDVFVATCLIDLYGKCGRL 477
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
++A L +P + ++ W A++A +H + + A + ++A E + + +S +
Sbjct: 478 EDAMSLFYEIPRD-TSVPWNAIIASLGIHGRGEEALQLFKDMLA-ERVKADHITFVSLLS 535
Query: 446 SASH 449
+ SH
Sbjct: 536 ACSH 539
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 199/418 (47%), Gaps = 16/418 (3%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+L++ G + + T L+NLYV G ++ + FD I KN+ SW +IIS Y+ G
Sbjct: 42 HALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKY 101
Query: 113 EEAINMFRRLLHR----GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
EA+N +L L+PD ++ +L AC L D K +H V + G +VFV
Sbjct: 102 HEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFV 158
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
A SLV LY++ G ++ A +VF MP KD+ SW++MI G+ NG AL + M+ E +
Sbjct: 159 AASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGV 218
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
K + T+ +L CA + GV + ++ S+ + LI+MY+K GR+ A
Sbjct: 219 KMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQM 278
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF +M+ +D V WN++++ N A F ++ GI+P+ T V L +
Sbjct: 279 VFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSD 338
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
R + R L + +V++ + G ++ AH + +P + + I W L+
Sbjct: 339 QRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLV 397
Query: 409 AGCRLHKKTDLAEHVLNQLIALEPW-----NSGNYVLLSNIYSASHKWNDAAKIRSMM 461
G + + LA ++ +E N G +V + YS KI + +
Sbjct: 398 TG---YTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKL 452
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 155/323 (47%), Gaps = 15/323 (4%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
+++ K +H + GK +N+ ++T L++LY G++ +R FD + +K+I SW+S+I
Sbjct: 34 NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIIS 93
Query: 206 GYASNGFPKEALD----MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
Y G EA++ +F +L+P++YT +L AC SL G + +
Sbjct: 94 AYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKM 150
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
F + + +L+ +Y++ G + A KVF +M KD WNA++SG NG A GV
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
+++ G++ + T +L C + V G + + L + ++++ +
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK-HGLDSDVFVSNALINMYSK 269
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN--QLIALEPWNSGNYV 439
G+L +A + M + + + W +++A + A QL + P + V
Sbjct: 270 FGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRP-DLLTVV 327
Query: 440 LLSNIYSASHKWNDAAKIRSMMG 462
L++I+S + +D RS++G
Sbjct: 328 SLTSIFS---QLSDQRISRSILG 347
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/618 (40%), Positives = 366/618 (59%), Gaps = 53/618 (8%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAG-----LDCDEFVKTSLLNLYVHCGYLADALKV 87
FP + + H Q+ H+ +K G L E +K L+ Y A K
Sbjct: 19 FPQISRCKTTRHLKQI----HAHFIKTGQIHHPLAAAELLKFLTLSTQREIKY---ARKF 71
Query: 88 FDDIPDKNVVSWTAIISGY-------INEGNLEEAINMFRRLLHRGL-KPDSFSIVRVLT 139
F I N SW II + N EA+ F +L GL +P+ F+ VL
Sbjct: 72 FSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLK 131
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA-------------- 185
AC +L + K +HG+V + G + FV ++LV +Y CG M+ A
Sbjct: 132 ACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVV 191
Query: 186 ------------------RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
R +FD MP K +VSW+ MI G A NG KEA++MF++MQ +
Sbjct: 192 LWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGD 251
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+ P Y T+V VL A + LGA+ELG W F E+NE + VLG+ LIDMY+KCG + +A
Sbjct: 252 VPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAV 311
Query: 288 KVFREMKDK-DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
+VF +++K + + W+A++ GL+M+G + A F ++++ G+ P+ ++G+L C+HA
Sbjct: 312 QVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHA 371
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
GLV+EGR + M + L P IEHYGCMVDLLGR+G L+EA +LI +MP++P+ ++ A
Sbjct: 372 GLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKA 431
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
LL C++H ++ E + L+ P +SG+YV LSN++++ W K+R M + I
Sbjct: 432 LLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDI 491
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
+K GCSW+E+DGV+HEFLV D+SHP +E I+S L+E++ +L++ G+ P T VL +++E
Sbjct: 492 RKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVLLNMDE 551
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
+EKQ L HSEK+A+AFGLI+T P+ ++I KNLRVC DCH +IKL+SKI R+IIVRD
Sbjct: 552 KEKQSALHYHSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRD 611
Query: 587 NNRFHCFIEGSCSCKDFW 604
RFH F GSCSC D+W
Sbjct: 612 RKRFHHFENGSCSCMDYW 629
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 183/346 (52%), Gaps = 48/346 (13%)
Query: 14 AIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+ +++ M +G + P FTFP VLKACA+ + G + H +VK GL DEFV+++L+
Sbjct: 106 ALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLV 165
Query: 73 NLYVHCGYLADA--------------------------------LKVFDDIPDKNVVSWT 100
+YV CG + DA ++FD +P+K+VVSW
Sbjct: 166 RVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWN 225
Query: 101 AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
+ISG G+ +EAI MF + + P+ ++V VL A ++LG + KW+H + +
Sbjct: 226 VMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKN 285
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDM 219
+ + ++L+D+Y+KCG+++KA +VF+ + +K+ ++WS++I G A +G ++ALD
Sbjct: 286 EIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDH 345
Query: 220 FYNMQRENLKPEYYTMVGVLSACASLGALELG-------VWASSFMERNEFLSNPVLGTT 272
F+ MQ+ + P +GVLSAC+ G +E G V + R E
Sbjct: 346 FWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYG------C 399
Query: 273 LIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
++D+ + G + +A ++ M K D V+ A++ M+G +++
Sbjct: 400 MVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEMG 445
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N F+ AIE ++ M+ P T VL A +R +LG H K
Sbjct: 227 MISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNE 286
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-KNVVSWTAIISGYINEGNLEEAINMF 119
++ D+ + ++L+++Y CG + A++VF+ I + KN ++W+AII G G +A++ F
Sbjct: 287 IEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHF 346
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVATSLVDLYAK 178
R+ G+ P + VL+AC+ G + + I+ + VN G + +VDL +
Sbjct: 347 WRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGR 406
Query: 179 CGNMEKARRVFDQMPEK 195
G +E+A ++ MP K
Sbjct: 407 AGCLEEAEQLILNMPVK 423
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/607 (40%), Positives = 369/607 (60%), Gaps = 8/607 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + A+ N +R + T +L AC DF GV HS +K G
Sbjct: 222 MISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY-INEGNLEEAINMF 119
L+ + FV L++LY G L D KVFD + ++++SW +II Y +NE L AI++F
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR-AISLF 336
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG-RNVFVATSLVDLYAK 178
+ + ++PD +++ + + +QLGD+ + + G+ G ++ + ++V +YAK
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVG 237
G ++ AR VF+ +P D++SW+++I GYA NGF EA++M+ M+ E + T V
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
VL AC+ GAL G+ + +N + + T+L DMY KCGR+ A +F ++ +
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WN +++ +G+ + A +F ++ G++P+ TFV LL C+H+GLVDEG+ F
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
M + +TP ++HYGCMVD+ GR+GQL+ A + IKSM ++P+A +WGALL+ CR+H
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
DL + L +EP + G +VLLSN+Y+++ KW +IRS+ KG++K G S +EV
Sbjct: 637 DLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEV 696
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
D V F G+ +HP+ E++Y +L L KLK G+VP VL D+E++EK++ L HS
Sbjct: 697 DNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHS 756
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
E+LA+AF LI T K IRI KNLRVCGDCH K ISKIT REIIVRD+NRFH F G
Sbjct: 757 ERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGV 816
Query: 598 CSCKDFW 604
CSC D+W
Sbjct: 817 CSCGDYW 823
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 221/417 (52%), Gaps = 25/417 (5%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M + G P TFP VLKAC D G + H L +K G D +V SL++LY
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP-DSFSIVRVLT 139
+ +A +FD++P +++ SW A+ISGY GN +EA+ L GL+ DS ++V +L+
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLS 255
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
ACT+ GD + IH Y + G +FV+ L+DLYA+ G + ++VFD+M +D++S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF-M 258
W+S+I+ Y N P A+ +F M+ ++P+ T++ + S + LG + F +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ FL + +G ++ MYAK G + A VF + + D + WN ++SG + NG+ A
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 319 GVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR------VFSLTPMIEH 371
++ +E+ G I N T+V +L C+ AG + +G + + + VF +T
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS---- 491
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ D+ G+ G+L++A L +P N++ W L+A H + A + +++
Sbjct: 492 ---LADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 166/345 (48%), Gaps = 9/345 (2%)
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR-LLHR 125
+ L+NLY + G +A A FD I +++V +W +ISGY GN E I F +L
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
GL PD + VL AC + D IH + G +V+VA SL+ LY++ + A
Sbjct: 148 GLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
R +FD+MP +D+ SW++MI GY +G KEAL + ++ + T+V +LSAC
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEA 260
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
G GV S+ ++ S + LID+YA+ GR+ KVF M +D + WN+++
Sbjct: 261 GDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSII 320
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
+N A +F ++ IQP+ T + L + G + R R
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
I +V + + G +D A + +P + I W +++G
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIISG 424
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 12/273 (4%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
+L +AK +H + + + +NV ++ LV+LY GN+ AR FD + +D+ +W+ MI
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 206 GYASNGFPKEALDMF-YNMQRENLKPEYYTMVGVLSACAS-LGALELGVWASSFMERNEF 263
GY G E + F M L P+Y T VL AC + + ++ A F F
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKF----GF 181
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ + + +LI +Y++ + A +F EM +D WNA++SG +G K A +
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG 241
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
L + T V LL CT AG + G +S S L + ++DL G
Sbjct: 242 LRAM----DSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+L + ++ M + + I W +++ L+++
Sbjct: 297 RLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQ 328
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/562 (43%), Positives = 340/562 (60%), Gaps = 24/562 (4%)
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKV-FDDIPD--KNVVSWTAIISGYINEGNLEEAINM 118
D +T ++ ++ + AL++ +D P W +I+ Y A+N+
Sbjct: 87 DLSTLEQTKQIHAHIIKTHFHHALQIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNV 146
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ +L + D+F VL AC Q+ K IHG+V + G R+VFV +L+ +Y +
Sbjct: 147 YAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGE 206
Query: 179 CGNMEKARRVFDQMPEKDIVSW----SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
C +E AR VFD+M E+D+VSW ++++ YA G A +F + ++ + +
Sbjct: 207 CACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLARQLFNGLTQKTV----VS 262
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPV-------------LGTTLIDMYAKCG 281
+++ C LE G M+ N + L T L+DMYAKCG
Sbjct: 263 WTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNKERVEVDCILNTALVDMYAKCG 322
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
+ A ++F E +D +WNA+++G +M+GY + A +F ++E+ G++PN TF+GLL
Sbjct: 323 DINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLH 382
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C+HAGLV EG++ F M F L P IEHYGCMVDLLGR+G LDEAHE+IKSMP++PN
Sbjct: 383 ACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNT 442
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMM 461
IVWGAL+A CRLHK L E QL+ +EP N G VL+SNIY+A+++W+DAA +R M
Sbjct: 443 IVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTM 502
Query: 462 GDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVL 521
G++K G S +EV+G VHEFL+GD SHP +I L E+ KL AG+VP T VL
Sbjct: 503 KTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVL 562
Query: 522 FDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGRE 581
+I+EEEK+ L HSEKLA+AFGLI+TAP IRI KNLRVC DCH A KL+SKI GR
Sbjct: 563 LNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRV 622
Query: 582 IIVRDNNRFHCFIEGSCSCKDF 603
IIVRD NRFH F EG CSC D+
Sbjct: 623 IIVRDRNRFHHFREGYCSCGDY 644
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 174/373 (46%), Gaps = 70/373 (18%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + + ++A+ Y +R F NF P VLKAC + QLG H ++K G
Sbjct: 130 VITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKG 189
Query: 61 LDCDEFV-----------------------------------KTSLLNLYVHCGYLADAL 85
LD D FV T+LL++Y CG+L A
Sbjct: 190 LDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLAR 249
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
++F+ + K VVSWTA+I+G I LEE +F R+ + P+ ++
Sbjct: 250 QLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITM----------- 298
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
+N+ + + T+LVD+YAKCG++ A R+F + +DI W+++I
Sbjct: 299 -----------LNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIIT 347
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER--NEF 263
G+A +G+ +EALD+F M+R+ +KP T +G+L AC+ G + G E+ + F
Sbjct: 348 GFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEG---KKLFEKMVHTF 404
Query: 264 LSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVAFGV 320
P + ++D+ + G + +A ++ + M K + +VW A+V+ ++ ++
Sbjct: 405 GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELA 464
Query: 321 FGQL-----EKCG 328
QL E CG
Sbjct: 465 ATQLLEIEPENCG 477
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/570 (39%), Positives = 356/570 (62%), Gaps = 4/570 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L++ R + Q + H+ I+ +GL + T L++L G + A ++F +P+ +
Sbjct: 97 LLRSGPRLRNLQ---QVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPD 153
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+ +++ G + + +RR+L G +++ V+ AC L L K IH
Sbjct: 154 SFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHS 213
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+V G G +++V +L+ LYAK +M+ A++VFD MP++ I++W+S+I GY NG P+E
Sbjct: 214 HVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQE 273
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
++ +F+ M +P+ T+V +LS+C+ LGAL+ G W + + N F N VLGT+LI+
Sbjct: 274 SIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLIN 333
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MY +CG +++A +VF MK+++ V W A++SG M+GY + A +F ++ G +PN T
Sbjct: 334 MYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNIT 393
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS- 394
FV +L C H+GL+D+GR+ F+SM + L P +EH CMVD+ GR+G L++A++ IK
Sbjct: 394 FVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKF 453
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDA 454
+P EP VW ++L CR+H+ DL V ++++EP N G+YV+LSNIY+ + + +
Sbjct: 454 IPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRV 513
Query: 455 AKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFV 514
+R+MM + ++K G S +E++ + F +GD SHP + IY LDEL + +G+V
Sbjct: 514 EMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYV 573
Query: 515 PTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLI 574
P + ++ D+EEEE+ Y L HSEKLALAFGL+ T + IRI KNLR+C DCH AIK I
Sbjct: 574 PAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHI 633
Query: 575 SKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
S I REIIVRD RFH F +GSCSC D+W
Sbjct: 634 SIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 191/356 (53%), Gaps = 14/356 (3%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
+ FY M G +N+TF V+KACA +LG HS ++ G D +V+ +L+
Sbjct: 173 TVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIA 232
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
LY + A KVFD +P + +++W ++ISGY G +E+I +F ++ G +PDS +
Sbjct: 233 LYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSAT 292
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
IV +L++C+QLG L W+H Y + G NV + TSL+++Y +CGN+ KAR VFD M
Sbjct: 293 IVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK 352
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
E+++V+W++MI GY +G+ ++A+++F M+ +P T V VLSACA G ++ G
Sbjct: 353 ERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRR 412
Query: 254 A-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM--KDKDQVVWNAVVSGLSM 310
SS E + ++DM+ + G + A + ++ K+ VW +++ M
Sbjct: 413 VFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRM 472
Query: 311 NGY----VKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
+ VKVA V ++P N +V L AG +D N M+R
Sbjct: 473 HRNFDLGVKVAEHVL------SVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTR 522
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 152/354 (42%), Gaps = 46/354 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N Q +I ++ M GF P + T +L +C++ G H G
Sbjct: 261 LISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNG 320
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + + TSL+N+Y CG ++ A +VFD + ++NVV+WTA+ISGY G +A+ +F
Sbjct: 321 FDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFT 380
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAKC 179
+ G +P++ + V VL+AC G + + + + EA G V +VD++ +
Sbjct: 381 EMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRA 440
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + A + + PKE P +T +L
Sbjct: 441 GLLNDAYQFIKKF-------------------IPKEP------------GPAVWT--SML 467
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC +LGV + + E NP L ++YA GRM + ++ R M + ++
Sbjct: 468 GACRMHRNFDLGVKVAEHVLSVE-PENPGHYVMLSNIYALAGRMDRV-EMVRNMMTRRRL 525
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG----LLCGCTHAGLV 349
S + +N +F +K P NT L+C C+ +G V
Sbjct: 526 KKQVGYSTIEINRKTY----LFSMGDKS--HPQTNTIYRYLDELMCRCSESGYV 573
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/643 (38%), Positives = 366/643 (56%), Gaps = 60/643 (9%)
Query: 17 FYNSMRNEGFLPTN---FTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
YN R F P + PF +C D + + H++ +K G D ++
Sbjct: 5 IYNPNRTLNFSPQPPLILSKPFT--SCKTPRDLK---QLHAIFIKTGQIQDPLTAAEVIK 59
Query: 74 LYVHCGYLAD-ALKVFDDIPDKNVVSWTAI--ISGYINEGNLE-EAINMFRRLLHRG-LK 128
D A VF +P+ N W I I N+ +L+ EA+ +F +L G +K
Sbjct: 60 FCAFSSRDIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVK 119
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC--------- 179
P+ F+ VL AC + L K IHG + + G + FV ++LV +Y C
Sbjct: 120 PNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSL 179
Query: 180 --------------------------------------GNMEKARRVFDQMPEKDIVSWS 201
G+++ A+ +FD+MP + +VSW+
Sbjct: 180 FCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWN 239
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
MI GYA NG EA+++F MQ N+ P Y T+V VL A A +GALELG W + +N
Sbjct: 240 VMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN 299
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ + VLG+ L+DMY+KCG + +A +VF + ++ + W+A++ +M+G + A F
Sbjct: 300 KVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHF 359
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
+ K G+ PN ++G+L C+HAGLV+EGR FF+ M +V L P IEHYGCMVDLLGR
Sbjct: 360 HLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 419
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+G L+EA ELI++MP+EP+ ++W ALL C++HK + E V L+ L P +SG+YV L
Sbjct: 420 AGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVAL 479
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
SN+Y++ W A++R M I+K GCSW+E+ G++HEFLV D+SH +++I + L
Sbjct: 480 SNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAML 539
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
E++ KL++ G+ P T V + +E+E+ L HSEK+A+AFGLI+TAP+ ++I KNL
Sbjct: 540 GEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNL 599
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH ++KLIS I R+IIVRD RFH F GSCSC D+W
Sbjct: 600 RICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N F AI + M++ P T VL A AR +LG H K
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNK 300
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D+ + ++L+++Y CG + AL+VF+ +P +N ++W+AII + G E+AI F
Sbjct: 301 VEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFH 360
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVATSLVDLYAKC 179
+ G+ P+ + + +L+AC+ G + + + V G + +VDL +
Sbjct: 361 LMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRA 420
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G++E+A + MP E D V W +++
Sbjct: 421 GHLEEAEELIRNMPIEPDDVIWKALL 446
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/595 (41%), Positives = 356/595 (59%), Gaps = 58/595 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG + AI+FY M G P ++TFPF+LK+CA+ Q G + H ++K G
Sbjct: 103 MIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLG 162
Query: 61 LDCDEFVKTSLLNLYVHCGYLA-------------------------------DALKVFD 89
L+ D FV TSL+N+Y G L DA ++F+
Sbjct: 163 LESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFE 222
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP ++ VSW A+I+GY G EEA+ F+ + + P+ ++V VL+AC Q G L
Sbjct: 223 EIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLEL 282
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
W+ ++ + G G N+ + +L+D+Y+KCG+++KAR +F+ + EKDI+SW+ MI GY+
Sbjct: 283 GNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSH 342
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF-LSNPV 268
KEAL +F MQ+ N++P T V +L ACA LGAL+LG W +++++ L+N
Sbjct: 343 MNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTS 402
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
L T+LIDMYAKCG + A +VF MK K WNA++SGL+M+G+ +A +F Q+ G
Sbjct: 403 LWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG 462
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
+P+ TFVG+L C+HAGLV+ GRQ F+SM + ++P ++HYGCM+DLLGR+G DEA
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA 522
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
L+K+M M+P+ +WG+LL CR+H +L E L LEP N G YVLLSNIY+ +
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATA 582
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
+W+D A+IR+ + DKG++K + IY LDE+
Sbjct: 583 GRWDDVARIRTKLNDKGMKK-------------------------XQDIYKMLDEIDQSF 617
Query: 509 -KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
+ G VP T VL+D++EE K+ L+ HSEKLA+AFGLI+T P+ IRI KNLR
Sbjct: 618 GERPGXVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLR 672
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 219/417 (52%), Gaps = 38/417 (9%)
Query: 46 FQLGVRSHSLIVKAGLDCDEFVKTSLLNL--YVHCGYLADALKVFDDIPDKNVVSWTAII 103
FQ + HS I+K GL +F + L+ G L+ AL +F+ I N W +I
Sbjct: 45 FQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMI 104
Query: 104 SGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG 163
G + AI+ + R+L G++P+S++ +L +C ++G K IHG+V + G
Sbjct: 105 RGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLE 164
Query: 164 RNVFVATSLVDLYAKCGNM-------------------------------EKARRVFDQM 192
+ FV TSL+++YA+ G + + ARR+F+++
Sbjct: 165 SDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEI 224
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
P +D VSW++MI GYA +G +EAL F M+R N+ P TMV VLSACA G+LELG
Sbjct: 225 PVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGN 284
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS-MN 311
W S++E + SN L LIDMY+KCG + +A +F + +KD + WN ++ G S MN
Sbjct: 285 WVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMN 344
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
Y K A +F ++++ ++PN TFV +L C + G +D G+ + + F
Sbjct: 345 SY-KEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSL 403
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAI-VWGALLAGCRLHKKTDLAEHVLNQL 427
+ ++D+ + G ++ A ++ M+P ++ W A+++G +H ++A + Q+
Sbjct: 404 WTSLIDMYAKCGNIEAAKQVFAG--MKPKSLGSWNAMISGLAMHGHANMALELFRQM 458
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/583 (41%), Positives = 354/583 (60%), Gaps = 6/583 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT TF ++ +CA+++ G+ H +V +G D D F+ T L+N+Y G + ALKV
Sbjct: 76 PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT----Q 143
FD+ ++ + W A+ G+ +E ++++ ++ G D F+ VL AC
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+ L K IH ++ G N+ V T+L+D+YAK G++ A VF MP K+ VSWS+M
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255
Query: 204 IQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
I +A N P +AL++F M E N P TMV +L ACA L ALE G ++ R
Sbjct: 256 IACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRR 315
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ S + LI MY +CG + +VF MK +D V WN+++S M+G+ K A +F
Sbjct: 316 QLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIF 375
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
+ G+ P+ +F+ +L C+HAGLV+EG+ F SM + + P +EHY CMVDLLGR
Sbjct: 376 ENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 435
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+ +L EA +LI+ M EP VWG+LL CR+H +LAE L LEP N+GNYVLL
Sbjct: 436 ANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLL 495
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
++IY+ + W++A + ++ +G+QK+ GCSW+EV V+ F+ D +P E+I++ L
Sbjct: 496 ADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALL 555
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+L+ ++KA G+VP T+ VL+D++EEEK+ + HSEKLA+AFGLI TA + IRI KNL
Sbjct: 556 VKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNL 615
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH K ISK REI+VRD NRFH F +G CSC D+W
Sbjct: 616 RLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 161/311 (51%), Gaps = 8/311 (2%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREH----DFQLGVRSHSLIVKAGLDCDEFVKTS 70
++ Y M G FT+ +VLKAC + G H+ I++ G + + V T+
Sbjct: 164 LDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTT 223
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK-- 128
LL++Y G ++ A VF +P KN VSW+A+I+ + +A+ +F+ ++
Sbjct: 224 LLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSV 283
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
P+S ++V +L AC L L K IHGY+ + V +L+ +Y +CG + +RV
Sbjct: 284 PNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRV 343
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD M ++D+VSW+S+I Y +GF K+A+ +F NM + + P Y + + VL AC+ G +
Sbjct: 344 FDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLV 403
Query: 249 ELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVS 306
E G + S + + ++D+ + R+ +A K+ +M + VW +++
Sbjct: 404 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLG 463
Query: 307 GLSMNGYVKVA 317
++ V++A
Sbjct: 464 SCRIHCNVELA 474
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 161/360 (44%), Gaps = 51/360 (14%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G L AL + P+ ++ +I + +L +++ R L+ G D
Sbjct: 61 GNLKQALHLLCCEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDP------- 113
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
F+AT L+++Y + G++++A +VFD+ E+ I
Sbjct: 114 ----------------------------FLATKLINMYYELGSIDRALKVFDETRERTIY 145
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA----SLGALELGVWA 254
W+++ + A G KE LD++ M + +T VL AC S+ L G
Sbjct: 146 VWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEI 205
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
+ + R+ + +N + TTL+D+YAK G ++ A VF M K+ V W+A+++ + N
Sbjct: 206 HAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMP 265
Query: 315 KVAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR--VFSLTPMIE 370
A +F + E C PN T V +L C +++G+ + R + S+ P++
Sbjct: 266 MKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVL- 324
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH----KKTDLAEHVLNQ 426
++ + GR G++ + +M + + + W +L++ +H K + E++++Q
Sbjct: 325 --NALITMYGRCGEVLMGQRVFDNMK-KRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQ 381
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI F N+ A+E + M E +P + T +L+ACA + G H I++
Sbjct: 255 MIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILR 314
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
LD V +L+ +Y CG + +VFD++ ++VVSW ++IS Y G ++AI +
Sbjct: 315 RQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQI 374
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI-HGYVNEAGKGRNVFVATSLVDLYA 177
F ++H+G+ P S + VL AC+ G + K + +++ + +VDL
Sbjct: 375 FENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 434
Query: 178 KCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ + +A ++ + M E W S++
Sbjct: 435 RANRLGEAIKLIEDMHFEPGPTVWGSLL 462
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/570 (39%), Positives = 356/570 (62%), Gaps = 4/570 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L++ R + Q + H+ I+ +GL + T L++L G + A ++F +P+ +
Sbjct: 33 LLRSGPRLRNLQ---QVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPD 89
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+ +++ G + + +RR+L G +++ V+ AC L L K IH
Sbjct: 90 SFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHS 149
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+V G G +++V +L+ LYAK +M+ A++VFD MP++ I++W+S+I GY NG P+E
Sbjct: 150 HVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQE 209
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
++ +F+ M +P+ T+V +LS+C+ LGAL+ G W + + N F N VLGT+LI+
Sbjct: 210 SIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLIN 269
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MY +CG +++A +VF MK+++ V W A++SG M+GY + A +F ++ G +PN T
Sbjct: 270 MYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNIT 329
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS- 394
FV +L C H+GL+D+GR+ F+SM + L P +EH CMVD+ GR+G L++A++ IK
Sbjct: 330 FVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKF 389
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDA 454
+P EP VW ++L CR+H+ DL V ++++EP N G+YV+LSNIY+ + + +
Sbjct: 390 IPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRV 449
Query: 455 AKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFV 514
+R+MM + ++K G S +E++ + F +GD SHP + IY LDEL + +G+V
Sbjct: 450 EMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYV 509
Query: 515 PTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLI 574
P + ++ D+EEEE+ Y L HSEKLALAFGL+ T + IRI KNLR+C DCH AIK I
Sbjct: 510 PAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHI 569
Query: 575 SKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
S I REIIVRD RFH F +GSCSC D+W
Sbjct: 570 SIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 191/356 (53%), Gaps = 14/356 (3%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
+ FY M G +N+TF V+KACA +LG HS ++ G D +V+ +L+
Sbjct: 109 TVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIA 168
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
LY + A KVFD +P + +++W ++ISGY G +E+I +F ++ G +PDS +
Sbjct: 169 LYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSAT 228
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
IV +L++C+QLG L W+H Y + G NV + TSL+++Y +CGN+ KAR VFD M
Sbjct: 229 IVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK 288
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
E+++V+W++MI GY +G+ ++A+++F M+ +P T V VLSACA G ++ G
Sbjct: 289 ERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRR 348
Query: 254 A-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM--KDKDQVVWNAVVSGLSM 310
SS E + ++DM+ + G + A + ++ K+ VW +++ M
Sbjct: 349 VFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRM 408
Query: 311 NGY----VKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
+ VKVA V ++P N +V L AG +D N M+R
Sbjct: 409 HRNFDLGVKVAEHVL------SVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTR 458
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 152/354 (42%), Gaps = 46/354 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N Q +I ++ M GF P + T +L +C++ G H G
Sbjct: 197 LISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNG 256
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + + TSL+N+Y CG ++ A +VFD + ++NVV+WTA+ISGY G +A+ +F
Sbjct: 257 FDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFT 316
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAKC 179
+ G +P++ + V VL+AC G + + + + EA G V +VD++ +
Sbjct: 317 EMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRA 376
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + A + + PKE P +T +L
Sbjct: 377 GLLNDAYQFIKKF-------------------IPKEP------------GPAVWT--SML 403
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC +LGV + + E NP L ++YA GRM + ++ R M + ++
Sbjct: 404 GACRMHRNFDLGVKVAEHVLSVE-PENPGHYVMLSNIYALAGRMDRV-EMVRNMMTRRRL 461
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG----LLCGCTHAGLV 349
S + +N +F +K P NT L+C C+ +G V
Sbjct: 462 KKQVGYSTIEINRKTY----LFSMGDKS--HPQTNTIYRYLDELMCRCSESGYV 509
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/577 (40%), Positives = 348/577 (60%), Gaps = 1/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT + + ACA+ + + + H+ + + D F+ SL+++Y C + DA V
Sbjct: 49 PTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNV 108
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD + K++VSWT++I+GY EAI + +L KP+ F+ +L A D
Sbjct: 109 FDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
T + IH + G +V+V ++L+D+YA+CG M+ A VFD++ K+ VSW+++I G+
Sbjct: 169 GTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A G + AL F M R + ++T V S+ A LGALE G W + + ++
Sbjct: 229 ARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTA 288
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+G TL+DMYAK G M A KVF + +KD V WN++++ + G K A F ++ K
Sbjct: 289 FVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS 348
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G+ N TF+ +L C+H GLV EG+++F M + + L P I+HY +V LLGR+G L+
Sbjct: 349 GVYLNQITFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHYVTVVALLGRAGLLNY 407
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A I MPMEP A VWGALLA CR+HK + + + + L+P +SG VLL NIY++
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYAS 467
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +W+ AA++R MM G++K CSWVE++ VH F+ D++HP +E+IY E++ K
Sbjct: 468 TGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKK 527
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
++ G+VP D+VL ++++EK+ L HSEKLALAF LI IRI KN+R+CGDC
Sbjct: 528 IRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDC 587
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A K ISK+ GREI+VRD NRFH F GSCSC D+W
Sbjct: 588 HSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 165/317 (52%), Gaps = 1/317 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ ND AI M F P FTF +LKA D G + H+L VK G
Sbjct: 123 LIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCG 182
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++LL++Y CG + A VFD + KN VSW A+ISG+ +G+ E A+ F
Sbjct: 183 WHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFA 242
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G + F+ V ++ +LG L KW+H +V ++ + FV +L+D+YAK G
Sbjct: 243 EMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSG 302
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M AR+VFD++ KD+V+W+SM+ +A G KEA+ F M++ + T + +L+
Sbjct: 303 SMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILT 362
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK-VFREMKDKDQV 299
AC+ G ++ G M+ + T++ + + G + A +F+ +
Sbjct: 363 ACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAA 422
Query: 300 VWNAVVSGLSMNGYVKV 316
VW A+++ M+ KV
Sbjct: 423 VWGALLAACRMHKNAKV 439
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/589 (37%), Positives = 360/589 (61%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ +I+ ++ MR LP +T +L A + Q G H+ + K G + D V +L
Sbjct: 397 EESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNAL 456
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+ +Y+ G + D K+++ + D++++SW A +SG + G + + +F +L G P+
Sbjct: 457 VTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNM 516
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++ + +L +C+ L D+ + +H ++ + N FV T+L+D+YAKC +E A F++
Sbjct: 517 YTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNR 576
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+ +D+ +W+ +I YA ++AL+ F MQ+E +KP +T+ G LS C+SL +LE G
Sbjct: 577 LSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGG 636
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
S + ++ +S+ +G+ L+DMYAKCG M +A +F + +D + WN ++ G + N
Sbjct: 637 QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQN 696
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G A F + GI P+G TF G+L C+H GLV+EG++ FNSM R F ++P ++H
Sbjct: 697 GQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDH 756
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
CMVD+LGR G+ DE + I+ M + NA++W +L ++H L E N+L L+
Sbjct: 757 CACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQ 816
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P +Y+LLSNI++ +W+D ++RS+M KG++K GCSWVE +G VH F+ D SH
Sbjct: 817 PEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSH 876
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P ++I+ KLDEL +L + +VP T++VL ++ E EK+ L HSE+LAL F LI+T+
Sbjct: 877 PQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSS 936
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
+ IRI KNLR+C DCH+ +K IS IT +EI+VRD RFH F G+CSC
Sbjct: 937 EKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 206/410 (50%), Gaps = 2/410 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ ++ + SM FT VLK CA + + G HSLI+K G
Sbjct: 285 LLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG 344
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +EF+ L+++Y CG DA+ VF I ++V W+A+I+ +G EE+I +F
Sbjct: 345 YEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH 404
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ P+ ++I +L+A T G+L + IH V + G +V V+ +LV +Y K G
Sbjct: 405 LMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNG 464
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ ++++ M ++D++SW++ + G G L +FY+M E P YT + +L
Sbjct: 465 CVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILG 524
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+C+ L + G + + +N+ N + T LIDMYAKC + A F + +D
Sbjct: 525 SCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFT 584
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++ + + A F Q+++ G++PN T G L GC+ ++ G+Q + +
Sbjct: 585 WTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVF 644
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ ++ M +VD+ + G ++EA L +++ + + I W ++ G
Sbjct: 645 KSGHVSDMFVG-SALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 200/378 (52%), Gaps = 2/378 (0%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +L+ CA + + H LIVK ++ D + SL+N+Y C Y A A V +P
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
D++VVSWTA+I G + EG ++I +F+ + + G+ P+ F++ L AC+ L K
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+H + G ++FV ++LVDLYAKCG +E A ++F MPE++ V+W+ ++ GYA G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
L +F +M ++K +T+ VL CA+ L+ G S + + + N +G
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+DMY+KCG A VF+ +K D VVW+A+++ L G + + +F + PN
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
T LL T+ G + G+ + + + + +V + ++G + + +L
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWK-YGFETDVAVSNALVTMYMKNGCVHDGTKLY 473
Query: 393 KSMPMEPNAIVWGALLAG 410
+SM ++ + I W A L+G
Sbjct: 474 ESM-VDRDLISWNAYLSG 490
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 183/354 (51%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+G V+ +I + M+NEG +P FT LKAC+ LG + H+ K G
Sbjct: 184 LIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLG 243
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D FV ++L++LY CG + A K+F +P++N V+W +++GY G++ + +F
Sbjct: 244 LLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFC 303
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ +K + F++ VL C +L + IH + + G N F+ LVD+Y+KCG
Sbjct: 304 SMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCG 363
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
A VF + + DIV WS++I G +E++ +F+ M+ + P YT+ +LS
Sbjct: 364 LAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLS 423
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A + G L+ G + + + F ++ + L+ MY K G + K++ M D+D +
Sbjct: 424 AATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLIS 483
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
WNA +SGL G +F + + G PN TF+ +L C+ V GRQ
Sbjct: 484 WNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQ 537
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 175/309 (56%), Gaps = 6/309 (1%)
Query: 8 NDC--FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
+DC + + + M EGF+P +TF +L +C+ D G + H+ I+K LD +
Sbjct: 492 HDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNN 551
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
FV T+L+++Y C YL DA F+ + +++ +WT II+ Y E+A+N FR++
Sbjct: 552 FVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQE 611
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G+KP+ F++ L+ C+ L L + +H V ++G ++FV ++LVD+YAKCG ME+A
Sbjct: 612 GVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA 671
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+F+ + +D ++W+++I GYA NG +AL F M E + P+ T G+LSAC+
Sbjct: 672 EALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQ 731
Query: 246 GALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWN 302
G +E G + M R +F +P + ++D+ + G+ + ++M+ ++ ++W
Sbjct: 732 GLVEEGKEHFNSMYR-DFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWE 790
Query: 303 AVVSGLSMN 311
V+ M+
Sbjct: 791 TVLGASKMH 799
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + + + A+ ++ M+ EG P FT L C+ + G + HS++ K+G
Sbjct: 588 IITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSG 647
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV ++L+++Y CG + +A +F+ + ++ ++W II GY G +A+ FR
Sbjct: 648 HVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFR 707
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L G+ PD + +L+AC+ G + K + + G V +VD+ +
Sbjct: 708 MMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRV 767
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G ++ +M ++ + W +++
Sbjct: 768 GKFDELEDFIQKMQLSQNALIWETVL 793
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/639 (38%), Positives = 373/639 (58%), Gaps = 48/639 (7%)
Query: 14 AIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+E ++ M NE G P N T VL CA LG + H V + + + FV L+
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF------------- 119
++Y CG + +A VF ++ K+VVSW A+++GY G E+A+ +F
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 120 ----------------------RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY- 156
R++L G+KP+ +++ VL+ C +G L K IH Y
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 157 ------VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYA 208
+ + G G V L+D+YAKC ++ AR +FD + E+D+V+W+ MI GY+
Sbjct: 392 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 209 SNGFPKEALDMFYNMQREN--LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
+G +AL++ M E+ +P +T+ L ACASL AL +G ++ RN+ +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 267 PV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
P+ + LIDMYAKCG ++ A VF M K++V W ++++G M+GY + A G+F ++
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
+ G + +G T + +L C+H+G++D+G ++FN M VF ++P EHY C+VDLLGR+G+L
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
+ A LI+ MPMEP +VW A L+ CR+H K +L E+ ++ L + G+Y LLSN+Y
Sbjct: 632 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ + +W D +IRS+M KG++K GCSWVE F VGD +HP +++IY L +
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 751
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
++K G+VP T L D+++EEK L HSEKLALA+G++TT IRI KNLRVCG
Sbjct: 752 QRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCG 811
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH A +S+I +II+RD++RFH F GSCSCK +W
Sbjct: 812 DCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 238/496 (47%), Gaps = 49/496 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + N C + + M + + P N+TFPFV KAC + G +H+L + G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +L+ +Y C L+DA KVFD++ +VVSW +II Y G + A+ MF
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 121 RLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ + G +PD+ ++V VL C LG S K +H + + +N+FV LVD+YAKC
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN------------ 227
G M++A VF M KD+VSW++M+ GY+ G ++A+ +F MQ E
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 228 -----------------------LKPEYYTMVGVLSACASLGAL----ELGVWASSF--- 257
+KP T++ VLS CAS+GAL E+ +A +
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM--KDKDQVVWNAVVSGLSMNGYVK 315
+ +N ++ LIDMYAKC ++ A +F + K++D V W ++ G S +G
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 316 VAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
A + ++ E C +PN T L C + G+Q R +
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
C++D+ + G + +A + +M M N + W +L+ G +H + A + +++ + +
Sbjct: 518 CLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG-F 575
Query: 434 NSGNYVLLSNIYSASH 449
LL +Y+ SH
Sbjct: 576 KLDGVTLLVVLYACSH 591
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 194/407 (47%), Gaps = 47/407 (11%)
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
+ + L++ Y+ G L+ A+ + P D V W ++I Y + G + + +F +
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
PD+++ V AC ++ + + H G NVFV +LV +Y++C ++
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACA 243
AR+VFD+M D+VSW+S+I+ YA G PK AL+MF M E +P+ T+V VL CA
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
SLG LG F +E + N +G L+DMYAKCG M +A VF M KD V WNA
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 304 VVSGLS------------------------------MNGYVKV-----AFGVFGQLEKCG 328
+V+G S ++GY + A GV Q+ G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-------CMVDLLGR 381
I+PN T + +L GC G + G++ + + + + +G ++D+ +
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKE-IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAK 419
Query: 382 SGQLDEAHELIKSM-PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
++D A + S+ P E + + W ++ G H + A +L+++
Sbjct: 420 CKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 132/307 (42%), Gaps = 53/307 (17%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G+ + A+E + M E P FT L ACA ++G + H+ ++
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 59 AGLDCDE-FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
+ FV L+++Y CG ++DA VFD++ KN V+WT++++GY G EEA+
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS------ 171
+F + G K D +++ VL AC+ G + Y N + + VF +
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM---EYFN---RMKTVFGVSPGPEHYA 619
Query: 172 -LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
LVDL + G + A R+ ++MP ++P
Sbjct: 620 CLVDLLGRAGRLNAALRLIEEMP----------------------------------MEP 645
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI-DMYAKCGRMAQACKV 289
V LS C G +ELG +A+ + E SN TL+ ++YA GR ++
Sbjct: 646 PPVVWVAFLSCCRIHGKVELGEYAAE--KITELASNHDGSYTLLSNLYANAGRWKDVTRI 703
Query: 290 FREMKDK 296
M+ K
Sbjct: 704 RSLMRHK 710
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/606 (38%), Positives = 372/606 (61%), Gaps = 6/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G V N A E +N+M+ G PT+ TF V+K+CA + L H +K+G
Sbjct: 275 MIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSG 334
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-KNVVSWTAIISGYINEGNLEEAINMF 119
L ++ V T+L+ C + DA +F + ++VVSWTA+ISGY+ G+ ++A+N+F
Sbjct: 335 LSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLF 394
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+KP+ F+ +LT + IH V + ++ V T+L+D + K
Sbjct: 395 SLMRREGVKPNHFTYSTILTVQHAV----FISEIHAEVIKTNYEKSSSVGTALLDAFVKI 450
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+ A +VF+ + KD+++WS+M+ GYA G +EA +F+ + RE +KP +T ++
Sbjct: 451 GNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSII 510
Query: 240 SAC-ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+AC A ++E G ++ + + + ++L+ +YAK G + A ++F+ K++D
Sbjct: 511 NACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDL 570
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WN+++SG + +G K A VF +++K ++ + TF+G++ C HAGLV +G+ +FN
Sbjct: 571 VSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNI 630
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + P +EHY CM+DL R+G L +A ++I MP P A VW +LA R+H+ +
Sbjct: 631 MINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIE 690
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L + ++I+LEP +S YVLLSNIY+A+ W++ +R +M + ++K G SW+EV
Sbjct: 691 LGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVK 750
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
+ FL GD SHPLS+ IYSKL EL T+L+ G+ P T++V DIE+E+K+ L+ HSE
Sbjct: 751 NKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSE 810
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LA+AFGLI T P+ ++I KNLRVCGDCH IKL+S + R I+VRD+NRFH F G C
Sbjct: 811 RLAIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLC 870
Query: 599 SCKDFW 604
SC D+W
Sbjct: 871 SCGDYW 876
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 224/429 (52%), Gaps = 8/429 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N E + M+ EG+ P +T V+ A A + +G++ H+L+VK G
Sbjct: 174 LLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLG 233
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + V SL+++ G L DA VFD++ +K+ VSW ++I+G++ G EA F
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFN 293
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G KP + V+ +C L +L + +H ++G N V T+L+ KC
Sbjct: 294 NMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCK 353
Query: 181 NMEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A +F M + +VSW++MI GY NG +A+++F M+RE +KP ++T +L
Sbjct: 354 EIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL 413
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+ ++ E+ + + + + + +GT L+D + K G ++ A KVF ++ KD +
Sbjct: 414 TVQHAVFISEI----HAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVI 469
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH-AGLVDEGRQFFNS 358
W+A+++G + G + A +F QL + GI+PN TF ++ CT V++G+Q F++
Sbjct: 470 AWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQ-FHA 528
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ L + +V L + G ++ AHE+ K E + + W ++++G H +
Sbjct: 529 YAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSMISGYAQHGQAK 587
Query: 419 LAEHVLNQL 427
A V ++
Sbjct: 588 KALEVFEEM 596
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 202/425 (47%), Gaps = 17/425 (4%)
Query: 9 DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK 68
D Q A+ + S+ G P ++T VL CA + +G + H VK GL V
Sbjct: 81 DQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVG 140
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
SL+++Y G + D +VFD++ D++VVSW ++++GY ++ +F + G +
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR 200
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
PD +++ V+ A G ++ IH V + G V SL+ + +K G + AR V
Sbjct: 201 PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD M KD VSW+SMI G+ NG EA + F NMQ KP + T V+ +CASL L
Sbjct: 261 FDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKEL 320
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV-WNAVVSG 307
L ++ +N + T L+ KC + A +F M VV W A++SG
Sbjct: 321 GLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISG 380
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE-----GRQFFNSMSRV 362
NG A +F + + G++PN T+ +L HA + E + + S V
Sbjct: 381 YLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT-VQHAVFISEIHAEVIKTNYEKSSSV 439
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ ++D + G + +A ++ + + + + I W A+LAG +T+ A
Sbjct: 440 GT---------ALLDAFVKIGNISDAVKVFELIETK-DVIAWSAMLAGYAQAGETEEAAK 489
Query: 423 VLNQL 427
+ +QL
Sbjct: 490 IFHQL 494
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 180/338 (53%), Gaps = 3/338 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A ++FD P +++ ++ Y +EA+++F L GL PDS+++ VL+ C
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+ + + +H + G ++ V SLVD+Y K GN+ RRVFD+M ++D+VSW+S+
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
+ GY+ N F + ++F MQ E +P+YYT+ V++A A+ GA+ +G+ + + + F
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ ++ +LI M +K G + A VF M++KD V WN++++G +NG AF F
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGR-QFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
++ G +P TF ++ C A L + G + + + L+ ++ L +
Sbjct: 295 MQLAGAKPTHATFASVIKSC--ASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKC 352
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++D+A L M + + W A+++G + TD A
Sbjct: 353 KEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQA 390
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/583 (40%), Positives = 352/583 (60%), Gaps = 6/583 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT TF ++ +C ++ GV H +V +GLD D ++ T L+N+Y G + A KV
Sbjct: 72 PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT----Q 143
FD+ +K + W AI E+ + ++ ++ G+ + F+ VL AC
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELS 191
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+ L K IH ++ G +V V T+L+D+YA+ G + A VF MP+K+IVSWS+M
Sbjct: 192 ICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAM 251
Query: 204 IQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
I YA N P +AL++F M E + P TMV VL ACASL ALE G +++ R
Sbjct: 252 IACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRR 311
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
S + TLI MY +CG ++ +VF MK +D + WN+++S M+G K A +F
Sbjct: 312 GLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIF 371
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
+ G+ P+ TF+ +LC C+HAGLV+E + F SM + + P +EHY CMVD+LGR
Sbjct: 372 ENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGR 431
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+ +LDEA ELI++M +P VWG+LL CR+H +LAE L LEP N+GNYVLL
Sbjct: 432 ANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLL 491
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
S+IY+ S WND ++R + +G+QKI CSW+EV ++ + + +P E++ + L
Sbjct: 492 SHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFL 551
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
L T++K G+VP T+ V +D++EEEK+ + HS KLA+AFGLI T+ ++IRI+ NL
Sbjct: 552 ITLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNL 611
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH +K +SK T REI++RD NRFHCF +G CSC D+W
Sbjct: 612 RLCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 162/311 (52%), Gaps = 12/311 (3%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREH----DFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
Y M G FT+ +VLKAC + G H+ I++ G + V T+LL
Sbjct: 162 LYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLL 221
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK--PD 130
++Y GY++ A VF +PDKN+VSW+A+I+ Y +A+ +F+ ++ P+
Sbjct: 222 DVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPN 281
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
++V VL AC L L K +H YV G + V +L+ +Y +CG + +RVFD
Sbjct: 282 PITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFD 341
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
M ++D++SW+S+I Y +G K+A+ +F NM + P Y T + VL AC+ G +E
Sbjct: 342 YMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEE 401
Query: 251 G-VWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDKD-QVVWNAVVS 306
+ S + N++ +P + ++D+ + R+ +A ++ + M K VW +++
Sbjct: 402 AKILFESML--NKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLG 459
Query: 307 GLSMNGYVKVA 317
++ V++A
Sbjct: 460 SCRIHCNVELA 470
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI + N+ A+E + M E +P T VL+ACA + G H+ +++
Sbjct: 251 MIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLR 310
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
GLD V +L+ +Y CG ++ +VFD + ++V+SW ++IS Y G ++AI +
Sbjct: 311 RGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQI 370
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI-HGYVNEAGKGRNVFVATSLVDLYA 177
F +++RG+ P + + VL AC+ G + AK + +N+ + +VD+
Sbjct: 371 FENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILG 430
Query: 178 KCGNMEKARRVFDQMPEKD-IVSWSSMI 204
+ +++A + M K W S++
Sbjct: 431 RANRLDEAIELIQNMDFKPGPTVWGSLL 458
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/606 (38%), Positives = 366/606 (60%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + N A++ + MR EG T +L C + D + H ++K G
Sbjct: 287 MISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHG 346
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV +L+N+Y G L DA K F + +VVSW +II+ Y + A F
Sbjct: 347 LEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFV 406
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-KGRNVFVATSLVDLYAKC 179
++ G +PD ++V + + Q D ++ +HG++ G +V + ++VD+YAK
Sbjct: 407 KMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKL 466
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGV 238
G ++ A +VF+ + KD++SW+++I GYA NG EA++++ M+ + + P T V +
Sbjct: 467 GLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSI 526
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L A A +GAL+ G+ + + + + T LID+Y KCGR+ A +F ++ +
Sbjct: 527 LPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS 586
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WNA++S ++G+ + +FG++ G++P+ TFV LL C+H+G V+EG+ F
Sbjct: 587 VTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRL 646
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + + P ++HYGCMVDLLGR+G L+ A+ IK MP++P+A +WGALL CR+H +
Sbjct: 647 MQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIE 705
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L + ++L ++ N G YVLLSNIY+ KW K+RS+ ++G++K G S +EV+
Sbjct: 706 LGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVN 765
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
V F G+ SHP ++IY +L L K+K+ G++P VL D+EE+EK++ L HSE
Sbjct: 766 RKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSE 825
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LA+AFG+I+T PK IRI KNLRVCGDCH A K IS+IT REI+VRD+NRFH F +G C
Sbjct: 826 RLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGIC 885
Query: 599 SCKDFW 604
SC D+W
Sbjct: 886 SCGDYW 891
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 223/419 (53%), Gaps = 12/419 (2%)
Query: 1 MIRGFVSNDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI +V N F AI FY + P +TFP VLKAC D G R H K
Sbjct: 188 MISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKL 244
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G + FV SL+++Y G+ A +FDD+P +++ SW A+ISG I GN +A+++
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+K + ++V +L C QLGD+STA IH YV + G ++FV+ +L+++YAK
Sbjct: 305 DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF 364
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+E AR+ F QM D+VSW+S+I Y N P A F MQ +P+ T+V +
Sbjct: 365 GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424
Query: 240 SACASLGALELGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
S A + F M R + + V+G ++DMYAK G + A KVF + KD
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDV 484
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+ WN +++G + NG A V+ +E+C I PN T+V +L H G + +G +
Sbjct: 485 ISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHG 544
Query: 358 SMSRVFSLTPMIEHY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
RV ++ + C++D+ G+ G+L +A L +P E +++ W A+++ +H
Sbjct: 545 ---RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIH 599
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 192/365 (52%), Gaps = 17/365 (4%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+L+V AG F+ T L+NLY + G ++ + FD IP K+V +W ++IS Y++ G+
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHF 198
Query: 113 EEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
EAI F +LL ++PD ++ VL AC G L + IH + + G NVFVA S
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAAS 255
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
L+ +Y++ G AR +FD MP +D+ SW++MI G NG +ALD+ M+ E +K
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMN 315
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
+ T+V +L C LG + + ++ ++ + + LI+MYAK G + A K F+
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
+M D V WN++++ N A G F +++ G QP+ T V L A +V +
Sbjct: 376 QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL------ASIVAQ 429
Query: 352 GRQFFNSMS------RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
R NS S R L + +VD+ + G LD AH++ + + ++ + I W
Sbjct: 430 SRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVK-DVISWN 488
Query: 406 ALLAG 410
L+ G
Sbjct: 489 TLITG 493
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 16/267 (5%)
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
AK +H + AGK +++F++T LV+LYA G++ +R FDQ+P+KD+ +W+SMI Y
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 210 NGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASL-GALELGVWASSFMERNEFLSNP 267
NG EA+ FY + ++P++YT VL AC +L + WA F N
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKL----GFQWNV 250
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ +LI MY++ G A +F +M +D WNA++SGL NG A V ++
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH----YGCMVDLLGRSG 383
GI+ N T V +L C G + + ++ + +E ++++ + G
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAM-----LIHLYVIKHGLEFDLFVSNALINMYAKFG 365
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAG 410
L++A + + M + + + W +++A
Sbjct: 366 NLEDARKAFQQMFIT-DVVSWNSIIAA 391
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/637 (37%), Positives = 381/637 (59%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+ D + A++ F+ +R+E P + T V+ ACA+ D + G + ++ I +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G++ ++ + ++L+++Y+ C + A ++FD+ N+ A+ S Y+ +G EA+ +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G++PD S++ +++C+QL ++ K HGYV G + +L+D+Y KC
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNG-----------FPK-------------- 214
+ A R+FD+M K +V+W+S++ GY NG P+
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 215 ------EALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
EA+++F +MQ +E + + TM+ + SAC LGAL+L W ++E+N +
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 505
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
LGTTL+DM+++CG A +F + ++D W A + ++M G + A +F + +
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++P+G FVG L C+H GLV +G++ F SM ++ ++P HYGCMVDLLGR+G L+E
Sbjct: 566 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 625
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A +LI+ MPMEPN ++W +LLA CR+ ++A + ++ L P +G+YVLLSN+Y++
Sbjct: 626 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 685
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WND AK+R M +KG++K G S +++ G HEF GD SHP I + LDE++ +
Sbjct: 686 AGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
G VP +VL D++E+EK + L+ HSEKLA+A+GLI++ IRI KNLRVC DC
Sbjct: 746 ASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDC 805
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H K SK+ REII+RDNNRFH +G CSC DFW
Sbjct: 806 HSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 199/360 (55%), Gaps = 5/360 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ S+ AI + M N G P +TFPF L ACA+ G++ H LIVK G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV+ SL++ Y CG L A KVFD++ ++NVVSWT++I GY ++A+++F
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 121 RLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R++ + P+S ++V V++AC +L DL T + ++ ++ +G N + ++LVD+Y KC
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A+R+FD+ ++ ++M Y G +EAL +F M ++P+ +M+ +
Sbjct: 285 NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI 344
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
S+C+ L + G ++ RN F S + LIDMY KC R A ++F M +K V
Sbjct: 345 SSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVV 404
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN++V+G NG V A+ F + + N ++ ++ G L +E + F SM
Sbjct: 405 TWNSIVAGYVENGEVDAAWETFETMP----EKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 204/412 (49%), Gaps = 39/412 (9%)
Query: 34 PFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY---LADALKVFDD 90
P LK C + ++ RS + K GLD D T L+ G L+ A +VF++
Sbjct: 36 PSSLKNCKTIDELKMFHRS---LTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 91 IPDKNV-VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+ ++I GY + G EAI +F R+++ G+ PD ++ L+AC +
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
IHG + + G +++FV SLV YA+CG ++ AR+VFD+M E+++VSW+SMI GYA
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 210 NGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
F K+A+D+F+ M R E + P TMV V+SACA L LE G +F+ + N +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ + L+DMY KC + A ++F E + + NA+ S G + A GVF + G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 329 IQPNGNTFVGLLCGCT-----------HAGLVDEGRQFFNSMS----------------- 360
++P+ + + + C+ H ++ G + ++++
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 361 RVFSL--TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
R+F + + +V +G++D A E ++MP E N + W +++G
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNIVSWNTIISG 443
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/627 (39%), Positives = 361/627 (57%), Gaps = 26/627 (4%)
Query: 2 IRGFVSNDCFQHAIEFYNSMR----NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIV 57
IR S F HAI + MR +P + P LK+CA L H+L +
Sbjct: 19 IRMAASQGQFLHAISLFLQMRASVAPRSSVPA--SLPAALKSCAGLGLCTLAASLHALAI 76
Query: 58 KAGLDCDEFVKTSLLNLYVHC---------------GYLADAL-----KVFDDIPDKNVV 97
++G D F +LLNL + G L A KVFD++ +++ V
Sbjct: 77 RSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAV 136
Query: 98 SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV 157
SW +I G +EA++M R + G PD+F++ VL + D+ +HGY
Sbjct: 137 SWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYA 196
Query: 158 NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G +VFV +SL+D+YA C M+ + +VFD + D V W+SM+ GYA NG +EAL
Sbjct: 197 IKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEAL 256
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
+F M + ++P T ++ A +L L LG +++ R F N + ++LIDMY
Sbjct: 257 GIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMY 316
Query: 278 AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
KCG + A +VF ++ D V W A++ G +++G AF +F ++E ++PN TF+
Sbjct: 317 CKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFL 376
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
+L C+HAGLVD G ++FNSMS + P +EH + D LGR+G LDEA+ I M +
Sbjct: 377 AVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKI 436
Query: 398 EPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKI 457
+P + VW LL CR+HK T LAE V ++ LEP + G++V+LSN+YSAS +WN+AA++
Sbjct: 437 KPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQL 496
Query: 458 RSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTT 517
R M KG++K CSW+EV +H F+ D SHP ++I L+ + ++ G+VP
Sbjct: 497 RKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNM 556
Query: 518 DHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKI 577
+ VL DIEEE+K+ L HSEKLA+ FG+I+T P IR+ KNLRVC DCH A K ISKI
Sbjct: 557 EDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKFISKI 616
Query: 578 TGREIIVRDNNRFHCFIEGSCSCKDFW 604
REI+VRD NRFH F +G+CSC DFW
Sbjct: 617 VAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 169/308 (54%), Gaps = 4/308 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G + Q A+ M +GF+P FT VL A D + G+ H +K G
Sbjct: 141 LILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNG 200
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FV +SL+++Y +C + ++KVFD D + V W ++++GY G++EEA+ +FR
Sbjct: 201 FDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFR 260
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+L G++P + ++ A L L K +H Y+ A N+F+++SL+D+Y KCG
Sbjct: 261 RMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCG 320
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N++ ARRVF+ + DIVSW++MI GYA +G EA +F M+ N+KP + T + VL+
Sbjct: 321 NVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLT 380
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK-D 297
AC+ G ++ G W N++ P L L D + G + +A EMK K
Sbjct: 381 ACSHAGLVDNG-WKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPT 439
Query: 298 QVVWNAVV 305
VW+ ++
Sbjct: 440 SSVWSTLL 447
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/620 (39%), Positives = 356/620 (57%), Gaps = 51/620 (8%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L AC H ++ G D FV +L++ Y CG + +A+KVF+ + K+
Sbjct: 126 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 185
Query: 96 VVSWTAIISGYINEGNLE-----------------------------------EAINMFR 120
VVSW A+++GY GN + EA+N+FR
Sbjct: 186 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 245
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV----------NEAGKGRNVFVAT 170
+++ G P+ +I+ VL+AC LG S IH Y + G+ ++ V
Sbjct: 246 QMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 305
Query: 171 SLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-- 226
+L+D+Y+KC + + AR +FD +P E+++V+W+ MI G+A G +AL +F M E
Sbjct: 306 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 365
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV--LGTTLIDMYAKCGRMA 284
+ P YT+ +L ACA L A+ +G +++ R+ + + LI+MY+KCG +
Sbjct: 366 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVD 425
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A VF M K + W ++++G M+G A +F ++ K G P+ TF+ +L C+
Sbjct: 426 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 485
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
H G+VD+G +F+SMS + LTP EHY +DLL R G+LD+A + +K MPMEP A+VW
Sbjct: 486 HCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVW 545
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
ALL+ CR+H +LAEH LN+L+ + N G+Y L+SNIY+ + +W D A+IR +M
Sbjct: 546 VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKS 605
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
GI+K GCSWV+ F VGD SHPLS +IY+ L+ L ++KA G+VP T+ L D+
Sbjct: 606 GIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDV 665
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
+EEEK L HSEKLALA+GL+TT P IRI KNLRVCGDCH A ISKI EI+V
Sbjct: 666 DEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVV 725
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD +RFH F GSCSC +W
Sbjct: 726 RDPSRFHHFKNGSCSCGGYW 745
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 223/466 (47%), Gaps = 60/466 (12%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M G +FT P VLKAC ++ G H LI G + + F+ +L+ +Y CG
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 81 LADALKVFDDIPDK---NVVSWTAIISGYINEGNLEEAINMFRRL---LHR---GLKPDS 131
L +A +FD+I + +V+SW +I+S ++ N A+++F ++ +H + D
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
SIV +L AC L + K +HG G +VFV +L+D YAKCG ME A +VF+
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK---------------------- 229
M KD+VSW++M+ GY+ +G K A ++F NM++EN+
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 230 -------------PEYYTMVGVLSACASLGALELGVWASSFMERNEFLS----------N 266
P T++ VLSACASLGA G+ ++ +N L+ +
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFRE--MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
++ LIDMY+KC A +F + +++++ V W ++ G + G A +F ++
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360
Query: 325 --EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-CMVDLLGR 381
E G+ PN T +L C H + G+Q + R C++++ +
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
G +D A + SM + +AI W +++ G +H + A + +++
Sbjct: 421 CGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHGRGSEALDIFDKM 465
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 180/352 (51%), Gaps = 18/352 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK-- 58
+I G+ C A+ + M G LP T VL ACA F G+ H+ +K
Sbjct: 227 VIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNC 286
Query: 59 --------AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYIN 108
G D D V +L+++Y C A +FDDIP ++NVV+WT +I G+
Sbjct: 287 LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQ 346
Query: 109 EGNLEEAINMFRRLLHR--GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV--NEAGKGR 164
G+ +A+ +F ++ G+ P++++I +L AC L + K IH YV +
Sbjct: 347 YGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSS 406
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
FVA L+++Y+KCG+++ AR VFD M +K +SW+SM+ GY +G EALD+F M+
Sbjct: 407 AYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMR 466
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL-IDMYAKCGRM 283
+ P+ T + VL AC+ G ++ G+ M + L+ ID+ A+ GR+
Sbjct: 467 KAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRL 526
Query: 284 AQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+A K ++M + VVW A++S ++ V++A +L + + +G+
Sbjct: 527 DKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGS 578
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE--GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G A++ + M +E G P +T +L ACA ++G + H+ +++
Sbjct: 340 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 399
Query: 59 AGL--DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
FV L+N+Y CG + A VFD + K+ +SWT++++GY G EA+
Sbjct: 400 HHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 459
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDL 175
++F ++ G PD + + VL AC+ G + + + G +DL
Sbjct: 460 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDL 519
Query: 176 YAKCGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPE 231
A+ G ++KA + MP E V W +++ +++ + AL+ M EN
Sbjct: 520 LARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN--DG 577
Query: 232 YYTMVGVLSACA 243
YT++ + A A
Sbjct: 578 SYTLISNIYATA 589
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/552 (42%), Positives = 340/552 (61%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ I G + V LL +YV G L DA ++FD + ++ SW+ I+ GY GN
Sbjct: 73 HAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNF 132
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
MFR LL G D +S V+ AC L DL + IH + G FV +L
Sbjct: 133 FSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATL 192
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
VD+YA+C +E A ++F +M ++D+ +W+ MI A +G P E+L F M+ + + P+
Sbjct: 193 VDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDK 252
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+V V+ ACA LGA+ +++ + + +LGT +IDMYAKCG + A +F
Sbjct: 253 VALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDR 312
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M+ ++ + W+A+++ +G + A +F + + GI PN TFV LL C+HAGL++EG
Sbjct: 313 MQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEG 372
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
++FF+SM + +TP ++HY CMVDLLGR+G+LDEA E+I+ MP+E + ++WGALL CR
Sbjct: 373 QRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACR 432
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
+H+ DLAE V L+ L+ G+YVLLSNIY+ + KW D AK R +M G++KI G
Sbjct: 433 IHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGR 492
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF 532
+W+EV +++F VGD +HP S +IY L L KL+ AG+ P T+ VL+D++EE KQ
Sbjct: 493 TWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGL 552
Query: 533 LACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
L HSEKLA+AFGL+ IRI KNLRVCGDCH K +S I + IIVRD RFH
Sbjct: 553 LYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRFHH 612
Query: 593 FIEGSCSCKDFW 604
F EG CSC+D+W
Sbjct: 613 FKEGVCSCRDYW 624
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 186/337 (55%), Gaps = 4/337 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ F + + G +++ P V++AC D + G H + +K G
Sbjct: 122 IVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCG 181
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD FV +L+++Y C + DA ++F + +++ +WT +I G E++ F
Sbjct: 182 LDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFD 241
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ ++G+ PD ++V V+ AC +LG ++ AK IH Y+N G +V + T+++D+YAKCG
Sbjct: 242 RMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCG 301
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E AR +FD+M +++++WS+MI Y +G ++AL++F M R + P T V +L
Sbjct: 302 SVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLY 361
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G +E G S M +E+ P + T ++D+ + GR+ +A ++ M +KD
Sbjct: 362 ACSHAGLIEEGQRFFSSMW-DEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKD 420
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+V+W A++ ++ ++ +A V L K Q G+
Sbjct: 421 EVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGH 457
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 138/307 (44%), Gaps = 9/307 (2%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
+L + +H + G RN+ VA L+ +Y + G +E A+ +FD M ++ SWS ++
Sbjct: 65 NLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVG 124
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GYA G MF + R + Y+ V+ AC L L+ G +
Sbjct: 125 GYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDY 184
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ TL+DMYA+C + A ++F +M +D W ++ L+ +G + F ++
Sbjct: 185 GHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMR 244
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQ 384
GI P+ V ++ C G +++ + ++ +SL ++ M+D+ + G
Sbjct: 245 NQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILG--TAMIDMYAKCGS 302
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYVLLS 442
++ A + M + N I W A++A H + + A + ++ + P +S
Sbjct: 303 VESARWIFDRMQVR-NVITWSAMIAAYGYHGQGEKALELFPMMLRSGILP---NRITFVS 358
Query: 443 NIYSASH 449
+Y+ SH
Sbjct: 359 LLYACSH 365
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/599 (39%), Positives = 368/599 (61%), Gaps = 9/599 (1%)
Query: 10 CFQH----AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
C+Q A++ +S+++ G + T+ ++K C G + G
Sbjct: 37 CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F+ L+N+YV L DA ++FD +P +NV+SWT +IS Y ++A+ + +L
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
++P+ ++ VL +C + D+ + +H + + G +VFV ++L+D++AK G E A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
VFD+M D + W+S+I G+A N AL++F M+R E T+ VL AC L
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
LELG+ A + + + + +L L+DMY KCG + A +VF +MK++D + W+ ++
Sbjct: 274 ALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMI 331
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
SGL+ NGY + A +F +++ G +PN T VG+L C+HAGL+++G +F SM +++ +
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
P+ EHYGCM+DLLG++G+LD+A +L+ M EP+A+ W LL CR+ + LAE+
Sbjct: 392 DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAK 451
Query: 426 QLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFL 485
++IAL+P ++G Y LLSNIY+ S KW+ +IR+ M D+GI+K GCSW+EV+ +H F+
Sbjct: 452 KVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFI 511
Query: 486 VGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFG 545
+GDNSHP ++ KL++L +L G+VP T+ VL D+E E+ + L HSEKLALAFG
Sbjct: 512 IGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFG 571
Query: 546 LITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
L+T + VIRI KNLR+CGDCH KL SK+ R I++R R+H F +G CSC D+W
Sbjct: 572 LMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 168/310 (54%), Gaps = 9/310 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + Q A+E M + P +T+ VL++C D ++ H I+K G
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEG 189
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+++L++++ G DAL VFD++ + + W +II G+ + A+ +F+
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G + ++ VL ACT L L + +V+ +++ + +LVD+Y KCG
Sbjct: 250 RMKRAGFIAEQATLTSVLRACTGLALLELG--MQAHVHIVKYDQDLILNNALVDMYCKCG 307
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A RVF+QM E+D+++WS+MI G A NG+ +EAL +F M+ KP Y T+VGVL
Sbjct: 308 SLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G LE G W + + +PV +ID+ K G++ A K+ EM+ + D
Sbjct: 368 ACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 426
Query: 298 QVVWNAVVSG 307
V W ++
Sbjct: 427 AVTWRTLLGA 436
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/596 (40%), Positives = 360/596 (60%), Gaps = 8/596 (1%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
H ++ N N P + +LK C + G H+ ++ + D +K S+L
Sbjct: 77 HVLDLIN---NGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSIL 133
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG---NLEEAINMFRRLLHRGLKP 129
+Y CG L A +VFD++ K+VV+WT++I+GY +G + A+ +F ++ GL+P
Sbjct: 134 FMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRP 193
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
+ F++ ++ C LG K IHG + G NVFV +SLVD+YA+CG + ++R VF
Sbjct: 194 NEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVF 253
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D++ K+ VSW+++I G+A G +EAL +F MQRE +T +L + ++ G+LE
Sbjct: 254 DELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLE 313
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G W + M ++ +G TL+ MYAK G + A KVF + D V N+++ G +
Sbjct: 314 QGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYA 373
Query: 310 MNGYVKVAFGVFGQLEK-CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+G K A +F ++ I+PN TF+ +L C+HAGL+DEG +F M + + L P
Sbjct: 374 QHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPK 432
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ HY +VDL GR+G LD+A I+ MP+EPNA +WGALL ++HK T++ + +++
Sbjct: 433 LSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVL 492
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
L+P+ G + LLSNIY+++ +W D AK+R M D G++K CSWVE++ VH F D
Sbjct: 493 ELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSAND 552
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
SHP K+Y + L K+K G+VP T HV ++++EK+ L HSEKLALAF L+
Sbjct: 553 ISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLN 612
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
T P VIRI KN+RVCGDCH AIK +S + REIIVRD NRFH F +GSCSC+D+W
Sbjct: 613 TKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 137/298 (45%), Gaps = 40/298 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF + A+ + M+ EGF T FT+ +L + + + G H+ ++K+G
Sbjct: 267 LISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSG 326
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+V +LL++Y G + DA KVFD + +VVS +++ GY G +EA+ +F
Sbjct: 327 KKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFE 386
Query: 121 R-LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L ++P+ + + VLTAC+ G L + + + G + T++VDL+ +
Sbjct: 387 EMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRA 446
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G +++A+ ++MP E + W +++ A M N
Sbjct: 447 GLLDQAKSFIEEMPIEPNATIWGALLG----------ASKMHKNT--------------- 481
Query: 239 LSACASLGALELGVWASS-FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
E+G +A+ +E + F P T L ++YA G+ KV +EMKD
Sbjct: 482 ----------EMGAYAAQKVLELDPFY--PGAHTLLSNIYASAGQWKDVAKVRKEMKD 527
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/620 (39%), Positives = 356/620 (57%), Gaps = 51/620 (8%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L AC H ++ G D FV +L++ Y CG + +A+KVF+ + K+
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292
Query: 96 VVSWTAIISGYINEGNLE-----------------------------------EAINMFR 120
VVSW A+++GY GN + EA+N+FR
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV----------NEAGKGRNVFVAT 170
+++ G P+ +I+ VL+AC LG S IH Y + G+ ++ V
Sbjct: 353 QMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 412
Query: 171 SLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-- 226
+L+D+Y+KC + + AR +FD +P E+++V+W+ MI G+A G +AL +F M E
Sbjct: 413 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 472
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV--LGTTLIDMYAKCGRMA 284
+ P YT+ +L ACA L A+ +G +++ R+ + + LI+MY+KCG +
Sbjct: 473 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVD 532
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A VF M K + W ++++G M+G A +F ++ K G P+ TF+ +L C+
Sbjct: 533 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 592
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
H G+VD+G +F+SMS + LTP EHY +DLL R G+LD+A + +K MPMEP A+VW
Sbjct: 593 HCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVW 652
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
ALL+ CR+H +LAEH LN+L+ + N G+Y L+SNIY+ + +W D A+IR +M
Sbjct: 653 VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKS 712
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
GI+K GCSWV+ F VGD SHPLS +IY+ L+ L ++KA G+VP T+ L D+
Sbjct: 713 GIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDV 772
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
+EEEK L HSEKLALA+GL+TT P IRI KNLRVCGDCH A ISKI EI+V
Sbjct: 773 DEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVV 832
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD +RFH F GSCSC +W
Sbjct: 833 RDPSRFHHFKNGSCSCGGYW 852
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 229/486 (47%), Gaps = 60/486 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + AI M G +FT P VLKAC ++ G H LI G
Sbjct: 88 LIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNG 147
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK---NVVSWTAIISGYINEGNLEEAIN 117
+ + F+ +L+ +Y CG L +A +FD+I + +V+SW +I+S ++ N A++
Sbjct: 148 FESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALD 207
Query: 118 MFRRL---LHR---GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+F ++ +H + D SIV +L AC L + K +HG G +VFV +
Sbjct: 208 LFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNA 267
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK-- 229
L+D YAKCG ME A +VF+ M KD+VSW++M+ GY+ +G K A ++F NM++EN+
Sbjct: 268 LIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLD 327
Query: 230 ---------------------------------PEYYTMVGVLSACASLGALELGVWASS 256
P T++ VLSACASLGA G+ +
Sbjct: 328 MVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHA 387
Query: 257 FMERNEFLS----------NPVLGTTLIDMYAKCGRMAQACKVFRE--MKDKDQVVWNAV 304
+ +N L+ + ++ LIDMY+KC A +F + +++++ V W +
Sbjct: 388 YSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVM 447
Query: 305 VSGLSMNGYVKVAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
+ G + G A +F ++ E G+ PN T +L C H + G+Q + R
Sbjct: 448 IGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH 507
Query: 363 FSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
C++++ + G +D A + SM + +AI W +++ G +H + A
Sbjct: 508 HQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHGRGSEAL 566
Query: 422 HVLNQL 427
+ +++
Sbjct: 567 DIFDKM 572
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 180/352 (51%), Gaps = 18/352 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK-- 58
+I G+ C A+ + M G LP T VL ACA F G+ H+ +K
Sbjct: 334 VIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNC 393
Query: 59 --------AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYIN 108
G D D V +L+++Y C A +FDDIP ++NVV+WT +I G+
Sbjct: 394 LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQ 453
Query: 109 EGNLEEAINMFRRLLHR--GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV--NEAGKGR 164
G+ +A+ +F ++ G+ P++++I +L AC L + K IH YV +
Sbjct: 454 YGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSS 513
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
FVA L+++Y+KCG+++ AR VFD M +K +SW+SM+ GY +G EALD+F M+
Sbjct: 514 AYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMR 573
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL-IDMYAKCGRM 283
+ P+ T + VL AC+ G ++ G+ M + L+ ID+ A+ GR+
Sbjct: 574 KAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRL 633
Query: 284 AQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+A K ++M + VVW A++S ++ V++A +L + + +G+
Sbjct: 634 DKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGS 685
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 9/300 (3%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T ++ Y+ CG AL V + + V W +I +I +G L+ AIN+ R+L G +
Sbjct: 55 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 114
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
D F++ VL AC +L HG + G NVF+ +LV +Y++CG++E+A +
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 174
Query: 189 FDQMPEK---DIVSWSSMIQGYASNGFPKEALDMFYNM------QRENLKPEYYTMVGVL 239
FD++ ++ D++SW+S++ + + ALD+F M + N + + ++V +L
Sbjct: 175 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 234
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC SL A+ RN + +G LID YAKCG M A KVF M+ KD V
Sbjct: 235 PACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 294
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA+V+G S +G K AF +F + K I + T+ ++ G + G E F M
Sbjct: 295 SWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQM 354
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE--GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G A++ + M +E G P +T +L ACA ++G + H+ +++
Sbjct: 447 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 506
Query: 59 AGL--DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
FV L+N+Y CG + A VFD + K+ +SWT++++GY G EA+
Sbjct: 507 HHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 566
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDL 175
++F ++ G PD + + VL AC+ G + + + G +DL
Sbjct: 567 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDL 626
Query: 176 YAKCGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPE 231
A+ G ++KA + MP E V W +++ +++ + AL+ M EN
Sbjct: 627 LARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN--DG 684
Query: 232 YYTMVGVLSACA 243
YT++ + A A
Sbjct: 685 SYTLISNIYATA 696
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 125/310 (40%), Gaps = 56/310 (18%)
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
+ T +V Y CG + A V +++ V W+ +I+ + G A+++ M R
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+ +++T+ VL AC L + G + N F SN + L+ MY++CG + +A
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172
Query: 288 KVFREMKDK---DQVVWNAVVSGLSMNGYVKVAFGVFGQ--------------------- 323
+F E+ + D + WN++VS + A +F +
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232
Query: 324 -LEKCGI--------QPNGN---------TFVG--LLCGCTHAGLVDEGRQFFNSM--SR 361
L CG + +GN FVG L+ GL++ + FN M
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP---NAIVWGALLAGCRLHKKTD 418
V S M+ Y +SG A EL K+M E + + W A++AG +
Sbjct: 293 VVSWNAMVAGY-------SQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 345
Query: 419 LAEHVLNQLI 428
A +V Q+I
Sbjct: 346 EALNVFRQMI 355
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/608 (39%), Positives = 369/608 (60%), Gaps = 43/608 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG N F+ +I F+ M P TFPFVLK+ A + +G H I+K G
Sbjct: 111 LIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFG 170
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK----NVVSWTAIISGYINEGNLEEAI 116
L+ D FV+ SL+++YV L ALKVFD+ P+ +V+ W +I GY G+L +A
Sbjct: 171 LEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKAT 230
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F + + T W SL++ +
Sbjct: 231 ELFDSMPKK----------------------DTGSW-----------------NSLINGF 251
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
K G+M +A+ +F +MPEK++VSW++M+ G++ NG P++AL+ F+ M E +P YT+V
Sbjct: 252 MKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIV 311
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
LSACA +GAL+ G+ +++ N F N V+GT L+DMYAKCG + A KVF E K+K
Sbjct: 312 SALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEK 371
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
++W+ ++ G +++G+ + A F ++ G +P+ F+ +L C+H+G V+EG +FF
Sbjct: 372 GLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFF 431
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
++M R + + P ++HY +VD+LGR+G+LDEA + I++MP+ P+ +VWGAL CR HK
Sbjct: 432 DNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKN 491
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
++AE +L+ LEP + G+YV LSN Y++ +W+DA ++R M D G K G S++E
Sbjct: 492 VEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIE 551
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
VD +H F+ GDN+H + +IYSKLDE++ + G+ + VL +IEEEEK+ L H
Sbjct: 552 VDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECVLHNIEEEEKEEALGYH 611
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEKLALAFG+++T P +RI KNLRVC DCH +K SK++ REII+RD RFH F +G
Sbjct: 612 SEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKMSKREIILRDMKRFHHFNDG 671
Query: 597 SCSCKDFW 604
CSC D+W
Sbjct: 672 VCSCGDYW 679
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/605 (38%), Positives = 362/605 (59%), Gaps = 35/605 (5%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADAL------- 85
F +L++C E+ LG + HSLI+ +G D+F+ LLNLY CG L A+
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 86 ------------------------KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
K+FD++P++NV +W A+++G I EE + +F R
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ G PD F++ VL C L L + +HGYV + G N+ V +SL +Y KCG+
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ + R+ MP +++V+W+++I G A NG+P+E LD + M+ +P+ T V V+S+
Sbjct: 235 LGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISS 294
Query: 242 CASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
C+ L L G + A + + + ++LI MY++CG + + KVF E ++ D V
Sbjct: 295 CSELATLGQGQQIHAEVIKAGASLIVSVI--SSLISMYSRCGCLEYSLKVFLECENGDVV 352
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W+++++ +G A +F Q+E+ ++ N TF+ LL C+H GL ++G +FF+ M
Sbjct: 353 CWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLM 412
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + P +EHY CMVDLLGR G ++EA LI+SMP++ + I W LL+ C++HKKT++
Sbjct: 413 VEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEM 472
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A + ++ L+P + YVLLSNI+++ +W+D + +R M D+ ++K G SW+EV
Sbjct: 473 ARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKN 532
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H+F +GD SHP S +I S L EL +++K G+VP D VL D++ E+K+Y L HSEK
Sbjct: 533 QIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEK 592
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AF L+ T IR+ KNLRVC DCH AIK IS+I+ REIIVRD++RFH F G CS
Sbjct: 593 LAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCS 652
Query: 600 CKDFW 604
C D+W
Sbjct: 653 CGDYW 657
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 166/320 (51%), Gaps = 4/320 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G + + + + ++ M GFLP F VL+ CA G + H + K G
Sbjct: 155 MVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCG 214
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + V +SL ++Y+ CG L + ++ +P +NVV+W +I+G G EE ++ +
Sbjct: 215 FEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYN 274
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G +PD + V V+++C++L L + IH V +AG V V +SL+ +Y++CG
Sbjct: 275 MMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCG 334
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E + +VF + D+V WSSMI Y +G EA+D+F M++E L+ T + +L
Sbjct: 335 CLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLY 394
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK-D 297
AC+ G E G+ M ++ P L T ++D+ + G + +A + R M K D
Sbjct: 395 ACSHCGLKEKGIKFFDLMV-EKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKAD 453
Query: 298 QVVWNAVVSGLSMNGYVKVA 317
+ W ++S ++ ++A
Sbjct: 454 VITWKTLLSACKIHKKTEMA 473
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 177/381 (46%), Gaps = 38/381 (9%)
Query: 100 TAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE 159
TA + ++G+L++A + F H +P FS +L +C LS K +H +
Sbjct: 25 TAEFTNLCSKGHLKQAFDRFSS--HIWSEPSLFS--HLLQSCISENSLSLGKQLHSLIIT 80
Query: 160 AGKGRNVFVATSLVDLYAKCGNMEKA-------------------------------RRV 188
+G + F++ L++LY+KCG ++ A R++
Sbjct: 81 SGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKM 140
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD+MPE+++ +W++M+ G F +E L +F M P+ + + VL CA L AL
Sbjct: 141 FDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRAL 200
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
G ++ + F N V+ ++L MY KCG + + ++ R M ++ V WN +++G
Sbjct: 201 VAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGR 260
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+ NGY + + ++ G +P+ TFV ++ C+ + +G+Q + + + +
Sbjct: 261 AQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKA-GASLI 319
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ ++ + R G L+ + ++ + + W +++A H + A + NQ+
Sbjct: 320 VSVISSLISMYSRCGCLEYSLKVFLECE-NGDVVCWSSMIAAYGFHGRGVEAIDLFNQM- 377
Query: 429 ALEPWNSGNYVLLSNIYSASH 449
E + + LS +Y+ SH
Sbjct: 378 EQEKLEANDVTFLSLLYACSH 398
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/577 (40%), Positives = 348/577 (60%), Gaps = 1/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT + + ACA+ + + + H+ + + D F+ SL++LY CG + +A KV
Sbjct: 49 PTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKV 108
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD++ K++VSWT++I+GY EEAI + +L KP+ F+ +L A D
Sbjct: 109 FDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADS 168
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ IH + +V+V ++L+D+YA+CG M+ A VFD++ K+ VSW+++I G+
Sbjct: 169 GIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGF 228
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A G + AL F M R + ++T V S+ A LGALE G W + M ++
Sbjct: 229 ARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTA 288
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
G TL+DMYAK G M A KVF + DKD V WN +++ + G K A F ++ K
Sbjct: 289 FAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKS 348
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI N TF+ +L C+H GLV EG+++F M + + L P I+H+ +V LLGR+G L+
Sbjct: 349 GIYLNQVTFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHFVTVVALLGRAGLLNF 407
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A I MP+EP A VWGALLA CR+HK + + + + L+P +SG VLL NIY++
Sbjct: 408 ALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYAS 467
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +W+ AA++R +M G++K CSWVE++ VH F+ D++HP +E+IY +++ K
Sbjct: 468 TGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKK 527
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
++ G+VP D+VL ++++E++ L HSEKLALAF LI IRI KN+R+CGDC
Sbjct: 528 IRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDC 587
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A K ISK+ GREI+VRD NRFH F GSCSC D+W
Sbjct: 588 HSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 1/317 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ ND + AI M F P FTF +LKA D +G + H+L VK
Sbjct: 123 LIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCD 182
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++LL++Y CG + A VFD + KN VSW A+ISG+ +G+ E A+ F
Sbjct: 183 WHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFA 242
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G + F+ V ++ +LG L KW+H ++ ++ + F +L+D+YAK G
Sbjct: 243 EMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSG 302
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M AR+VFD++ +KD+V+W++M+ +A G KEA+ F M++ + T + +L+
Sbjct: 303 SMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILT 362
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK-VFREMKDKDQV 299
AC+ G ++ G M+ + T++ + + G + A +F+ +
Sbjct: 363 ACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAA 422
Query: 300 VWNAVVSGLSMNGYVKV 316
VW A+++ M+ KV
Sbjct: 423 VWGALLAACRMHKNAKV 439
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/636 (38%), Positives = 368/636 (57%), Gaps = 32/636 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I G+V A++ YNSM +G L N TF +L + + LG + H IVK
Sbjct: 108 LISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKF 167
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV---------------------- 97
G FV +SL+++Y G ++ A +VFD++ ++NVV
Sbjct: 168 GFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLF 227
Query: 98 ---------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
SWT +I+G I G EA+++FR + G+ D ++ VLTAC L L
Sbjct: 228 HGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALK 287
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K IH + +G NVFV ++LVD+Y KC ++ A VF +M K++VSW++M+ GY
Sbjct: 288 EGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYG 347
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
NGF +EA+ +F +MQR ++P+ +T+ V+S+CA+L +LE G + +S
Sbjct: 348 QNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFIT 407
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ LI +Y KCG + + ++F EM +D+V W A+VSG + G +F ++ G
Sbjct: 408 VSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQG 467
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
++P+ TF+ +L C+ AGLV+ G+Q+F SM + + P +HY CM+DL GR+G+L+EA
Sbjct: 468 LKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEA 527
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
I MP P++I W LL+ CRL+ ++ + L+ L+P N Y+LLS+IY+A
Sbjct: 528 KNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAK 587
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
KW++ A++R M +KG +K G SW++ V+ F D S P S++IY++L++L K+
Sbjct: 588 GKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKM 647
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
G+VP VL D+E+ EK L HSEKLA+AFGL+ IR+ KNLRVCGDCH
Sbjct: 648 IEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCH 707
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A K ISKI+ REI+VRD RFH F +G+CSC DFW
Sbjct: 708 NATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 229/496 (46%), Gaps = 71/496 (14%)
Query: 38 KACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV- 96
K C + + H LI+K+ + + F+ +L+N Y G + A VFD +P N
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 97 ------------------------------VSWTAIISGYINEGNLEEAINMFRRLLHRG 126
VSW ++ISGY+ G++ EA+ + ++ G
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 127 -LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
L + + +L + G + + IHG + + G G VFV +SLVD+YAK G + A
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 186 RRVFDQ-------------------------------MPEKDIVSWSSMIQGYASNGFPK 214
+VFD+ M E+D +SW++MI G NG
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
EA+D+F +M++E + + YT VL+AC L AL+ G + + R+ + N +G+ L+
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
DMY KC + A VF+ M +K+ V W A++ G NG+ + A VF +++ GI+P+
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDF 372
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
T ++ C + ++EG Q F+ + V L I ++ L G+ G ++++++L
Sbjct: 373 TLGSVISSCANLASLEEGAQ-FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDE 431
Query: 395 MPMEPNAIVWGALLAGC----RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
M + + W AL++G + ++ DL E +L Q L+P +LS A
Sbjct: 432 MSFR-DEVSWTALVSGYAQFGKANETIDLFERMLVQ--GLKPDAVTFIAVLSACSRAGLV 488
Query: 451 WNDAAKIRSMMGDKGI 466
SM+ D GI
Sbjct: 489 ERGQQYFESMLKDHGI 504
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/524 (43%), Positives = 340/524 (64%)
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
++ A VF I + NV +W II GY N A +R+++ ++PD+ + +L A
Sbjct: 68 MSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKA 127
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
++ ++ + IH G VFV SL+ +YA CG+ E A +VF+ M E+D+V+W
Sbjct: 128 ISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAW 187
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+SMI G+A NG P EAL +F M E ++P+ +T+V +LSA A LGALELG ++ +
Sbjct: 188 NSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK 247
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
N + +L+D+YAKCG + +A +VF EM +++ V W +++ GL++NG+ + A +
Sbjct: 248 VGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALEL 307
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F ++E G+ P+ TFVG+L C+H G++DEG ++F M + P IEHYGCMVDLL
Sbjct: 308 FKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLS 367
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
R+G + +A+E I++MP++PNA++W LL C +H L E + L+ LEP +SG+YVL
Sbjct: 368 RAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVL 427
Query: 441 LSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSK 500
LSN+Y++ +W+D IR M G++K G S VE+ V+EF +GD SHP S+ +Y+
Sbjct: 428 LSNLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAL 487
Query: 501 LDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKN 560
L+++ LK G+VP T +VL DIEEEEK+ L+ HSEK+A+AF L+ T P IR+ KN
Sbjct: 488 LEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKN 547
Query: 561 LRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LRVC DCH AIKLI+KI REI++RD +RFH F GSCSCKD+W
Sbjct: 548 LRVCADCHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 183/316 (57%), Gaps = 2/316 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ +D A FY M P T+PF+LKA ++ + + G HS+ ++ G
Sbjct: 89 IIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNG 148
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV+ SLL++Y CG A KVF+ + ++++V+W ++I+G+ G EA+ +FR
Sbjct: 149 FESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFR 208
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++PD F++V +L+A +LG L + +H Y+ + G +N V SL+DLYAKCG
Sbjct: 209 EMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCG 268
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +A+RVF +M E++ VSW+S+I G A NGF +EAL++F M+ + L P T VGVL
Sbjct: 269 AIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLY 328
Query: 241 ACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G L+ G + E + ++D+ ++ G + QA + + M +
Sbjct: 329 ACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNA 388
Query: 299 VVWNAVVSGLSMNGYV 314
V+W ++ +++G++
Sbjct: 389 VIWRTLLGACTIHGHL 404
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/636 (38%), Positives = 359/636 (56%), Gaps = 32/636 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ N ++ YN M +G + N TF +L + LG + H I K
Sbjct: 108 LLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKF 167
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV---------------------- 97
G FV + L+++Y G++ DA ++F++IP+KN+V
Sbjct: 168 GYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLF 227
Query: 98 ---------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
SWT II+G G +EA++ F+ + G D F+ VLTAC L
Sbjct: 228 DNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALD 287
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K IH Y+ N+FV ++L+D+Y KC N++ A VF +M K+++SW++M+ GY
Sbjct: 288 EGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYG 347
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
NG+ +EA+ +F +MQR + P+ +T+ V+S+CA+L +LE G + +
Sbjct: 348 QNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVT 407
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ LI +Y KCG + A ++F EMK +D+V W A+VSG + G +F + G
Sbjct: 408 VSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHG 467
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
I P+G TFVG+L C+ AGLV++G +F M + +TP+ +HY CM+DLL R+G+L+EA
Sbjct: 468 IVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEA 527
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
I MP P+AI W LL+ CRL+ ++ + L LEP N +Y+LLS+IY+A
Sbjct: 528 KNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAK 587
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
KW+D AK+R M + G++K G SW++ VH F D S P S++IY+KL+ L K+
Sbjct: 588 GKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKM 647
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
G+VP VL D+E+ EK L HSEKLA+AFGL+ IR+ KNLRVCGDCH
Sbjct: 648 IEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCH 707
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A K IS+IT REI+VRD RFH F +G CSC DFW
Sbjct: 708 NATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 192/379 (50%), Gaps = 38/379 (10%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F +LL+ Y GYL D +VFD +P+ +VVSW +++SGY G + E++ ++ +L
Sbjct: 72 FSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKD 131
Query: 126 G---LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
G L +FS + +L++ DL + IHG + + G +FV + LVD+YAK G +
Sbjct: 132 GSVNLNRITFSTMLILSSNRGFVDL--GRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFI 189
Query: 183 EKARRV-------------------------------FDQMPEKDIVSWSSMIQGYASNG 211
A R+ FD MPEKD +SW+++I G NG
Sbjct: 190 NDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNG 249
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
KEA+D F M E + +T VL+AC AL+ G +++ R ++ N +G+
Sbjct: 250 LFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGS 309
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
L+DMY KC + A VFR+M+ K+ + W A++ G NGY + A +F +++ I P
Sbjct: 310 ALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHP 369
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ T ++ C + ++EG Q F+ + L + ++ L G+ G L+ AH+L
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQ-FHGQALASGLICFVTVSNALITLYGKCGSLEHAHQL 428
Query: 392 IKSMPMEPNAIVWGALLAG 410
M + + + W AL++G
Sbjct: 429 FHEMKIR-DEVSWTALVSG 446
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 149/324 (45%), Gaps = 42/324 (12%)
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R++ P++F ++ +LGDL A+ + ++ + N+F +L+ Y+K G
Sbjct: 30 RIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQP----NLFSWNTLLSAYSKLG 85
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE---NLKPEYYTMVG 237
++ +RVFD MP D+VSW+S++ GYA NG E++ ++ M ++ NL ++ +
Sbjct: 86 YLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTML 145
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE----- 292
+LS ++ G ++LG + + + S +G+ L+DMYAK G + A ++F E
Sbjct: 146 ILS--SNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKN 203
Query: 293 --------------------------MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
M +KD + W +++GL+ NG K A F ++
Sbjct: 204 IVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGI 263
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLD 386
G + TF +L C +DEG+Q + R I ++D+ + +
Sbjct: 264 EGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRT-DYQDNIFVGSALLDMYCKCRNVK 322
Query: 387 EAHELIKSMPMEPNAIVWGALLAG 410
A + + M N I W A+L G
Sbjct: 323 YAEAVFRKM-RHKNVISWTAMLVG 345
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/512 (44%), Positives = 336/512 (65%), Gaps = 3/512 (0%)
Query: 96 VVSWTAII-SGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
V+ + AI SGY+ I M+ R+LH+ + P+ F+ ++ AC + K IH
Sbjct: 58 VIKFCAISKSGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIH 117
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD--IVSWSSMIQGYASNGF 212
+V + G G + F +L+ +Y ++E+ARRVFD MP++D VSW++MI Y +
Sbjct: 118 AHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNR 177
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
EA +F M+ EN+ + + +LSAC LGALE G W ++E++ + L TT
Sbjct: 178 LHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATT 237
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
+IDMY KCG + +A +VF E+ K WN ++ GL+M+G + A +F ++E+ + P+
Sbjct: 238 VIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPD 297
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
G TFV +L C H+GLV+EG+ +F M+ V L P +EH+GCMVDLLGR+G L+EA +LI
Sbjct: 298 GITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLI 357
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
MP+ P+A V GAL+ CR+H T+L E + ++I LEP NSG YVLL+N+Y+++ +W
Sbjct: 358 NEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWE 417
Query: 453 DAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAG 512
D AK+R +M D+G++K G S +E + V EF+ G +HP +++IY+KLDE+ +++ G
Sbjct: 418 DVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIG 477
Query: 513 FVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIK 572
+VP TD VL DI+EEEK+ L HSEKLA+AFGL+ T P + +RI+KNLR+C DCH+A K
Sbjct: 478 YVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASK 537
Query: 573 LISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LISK+ REII+RD NRFH F G CSCKD+W
Sbjct: 538 LISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 179/320 (55%), Gaps = 18/320 (5%)
Query: 4 GFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC 63
G++ ++ I Y+ M ++ P FT+P +++AC ++ + G + H+ ++K G
Sbjct: 68 GYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGA 127
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRR 121
D F +L+++YV+ L A +VFD++P D+N VSW A+I+ Y+ L EA +F R
Sbjct: 128 DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDR 187
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ + D F +L+ACT LG L KWIHGY+ ++G + +AT+++D+Y KCG
Sbjct: 188 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGC 247
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+EKA VF+++P+K I SW+ MI G A +G + A+++F M+RE + P+ T V VLSA
Sbjct: 248 LEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 307
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTT--------LIDMYAKCGRMAQACKVFREM 293
CA G +E G +M VLG ++D+ + G + +A K+ EM
Sbjct: 308 CAHSGLVEEGKHYFQYM-------TEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEM 360
Query: 294 K-DKDQVVWNAVVSGLSMNG 312
+ D V A+V ++G
Sbjct: 361 PVNPDAGVLGALVGACRIHG 380
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 1/194 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI +V ++ A ++ MR E + F +L AC + G H I K+G
Sbjct: 168 MIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSG 227
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D + T+++++Y CG L A +VF+++P K + SW +I G G E AI +F+
Sbjct: 228 IELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFK 287
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAKC 179
+ + PD + V VL+AC G + K Y+ E G + +VDL +
Sbjct: 288 EMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRA 347
Query: 180 GNMEKARRVFDQMP 193
G +E+AR++ ++MP
Sbjct: 348 GLLEEARKLINEMP 361
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/628 (39%), Positives = 360/628 (57%), Gaps = 31/628 (4%)
Query: 7 SNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK-------- 58
SND F+ AI Y M G P NF FP VLKA + D + G + H+ VK
Sbjct: 70 SND-FREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSV 128
Query: 59 -------------AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISG 105
G+ F +L+ +Y G + D+ +F+ D+++VSW +IS
Sbjct: 129 TVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISS 188
Query: 106 YINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV-NEAGKGR 164
+ EA+ FR ++ G++ D +I VL AC+ L L K IH YV
Sbjct: 189 FSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIE 248
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
N FV ++LVD+Y C +E RRVFD + + I W++MI GYA NG ++AL +F M
Sbjct: 249 NSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMI 308
Query: 225 R-ENLKPEYYTMVGVLSACA-SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
+ L P TM V+ AC SL A+ G ++ RN S+ +G+ L+DMYAKCG
Sbjct: 309 KVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGC 368
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCG----IQPNGNTFV 337
+ + +VF EM +K+ + WN ++ M+G + A +F + + G +PN TF+
Sbjct: 369 LNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFI 428
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
+ C+H+GL+ EG F M + P +HY C+VDLLGR+GQL+EA+EL+ +MP
Sbjct: 429 TVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPA 488
Query: 398 EPNAI-VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAK 456
E + + W +LL CR+H+ +L E L+ LEP + +YVLLSNIYS++ WN A +
Sbjct: 489 EFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAME 548
Query: 457 IRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
+R M G++K GCSW+E VH+F+ GD SHP SE+++ L+ L+ K++ G+VP
Sbjct: 549 VRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPD 608
Query: 517 TDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISK 576
T VL +++E+EK+ L HSEKLA+AFG++ T P IR+AKNLRVC DCH A K ISK
Sbjct: 609 TSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISK 668
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I REIIVRD RFH F EG+CSC D+W
Sbjct: 669 IMEREIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 177/362 (48%), Gaps = 26/362 (7%)
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
P ++ SW + + EAI+ + + G +PD+F+ VL A + L DL T +
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 152 WIH------GY-----------VNEAGK----GRNVFVATSLVDLYAKCGNMEKARRVFD 190
IH GY VN GK G F +L+ +YAK G ++ ++ +F+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
++D+VSW++MI ++ + EAL F M E ++ + T+ VL AC+ L L++
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232
Query: 251 GVWASSFMER-NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G +++ R N+ + N +G+ L+DMY C ++ +VF + + +WNA++SG +
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYA 292
Query: 310 MNGYVKVAFGVFGQLEK-CGIQPNGNTFVGLLCGCTHA-GLVDEGRQFFNSMSRVFSLTP 367
NG + A +F ++ K G+ PN T ++ C H+ + +G++ R L
Sbjct: 293 RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNM-LAS 351
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
I +VD+ + G L+ + + MP + N I W L+ C +H K + A + +
Sbjct: 352 DITVGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMACGMHGKGEEALELFKNM 410
Query: 428 IA 429
+A
Sbjct: 411 VA 412
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/553 (39%), Positives = 359/553 (64%), Gaps = 1/553 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ ++K+ D F+ L+++Y GY DA ++FD++P++++VSW +++SG G L
Sbjct: 162 HARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYL 221
Query: 113 EEAINMFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+N F R+ G +P+ +++ V++AC +G L K +HG V + G V S
Sbjct: 222 GACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNS 281
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
L+++Y K G ++ A ++F++MP + +VSW+SM+ + NG+ ++ +D+F M+R + P+
Sbjct: 282 LINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPD 341
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
TMV +L AC G +++ R F ++ ++ T L+++YAK GR+ + +F
Sbjct: 342 QATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFE 401
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
E+KD+D + W A+++G +++ + A +F + K G++ + TF LL C+H+GLV+E
Sbjct: 402 EIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEE 461
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G+++F MS V+ + P ++HY CMVDLLGRSG+L++A+ELIKSMPMEP++ VWGALL C
Sbjct: 462 GKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGAC 521
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
R++ +L + V QL++L+P + NY++LSNIYSA+ W A+K+R +M ++ + + G
Sbjct: 522 RVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPG 581
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
CS++E +H F+VGD HP S++I++KL+EL K+ AG P T+ VL DI+EE K
Sbjct: 582 CSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVD 641
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
+ HSEKLA+AFGL+ T + I KNLR+CGDCH K S + R II+RD+ RFH
Sbjct: 642 MINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFH 701
Query: 592 CFIEGSCSCKDFW 604
F +G CSC+D+W
Sbjct: 702 HFADGLCSCRDYW 714
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 168/308 (54%), Gaps = 5/308 (1%)
Query: 21 MRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCG 79
MR E G P T V+ ACA G H ++VK G+ V SL+N+Y G
Sbjct: 231 MRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLG 290
Query: 80 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
+L A ++F+++P +++VSW +++ + + G E+ +++F + G+ PD ++V +L
Sbjct: 291 FLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLR 350
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
ACT G A+ IH Y++ G ++ +AT+L++LYAK G + + +F+++ ++D ++
Sbjct: 351 ACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIA 410
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W++M+ GYA + +EA+ +F M +E ++ ++ T +LSAC+ G +E G M
Sbjct: 411 WTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMS 470
Query: 260 RNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKV 316
+ P L + ++D+ + GR+ A ++ + M + VW A++ + G V++
Sbjct: 471 -EVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVEL 529
Query: 317 AFGVFGQL 324
V QL
Sbjct: 530 GKEVAEQL 537
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 157/298 (52%), Gaps = 10/298 (3%)
Query: 121 RLLHRGLKPDSF--SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+L + L DS S+V +++CT + S IH V ++ + F+ LV +Y K
Sbjct: 130 KLHNSSLLADSIVQSLVFAISSCTSV---SYCSAIHARVIKSLNYSDGFIGDRLVSMYFK 186
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVG 237
G E A+R+FD+MP +D+VSW+S++ G + G+ L+ F M+ E+ +P T++
Sbjct: 187 LGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLS 246
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
V+SACA +GAL+ G + + + +LI+MY K G + A ++F EM +
Sbjct: 247 VVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRS 306
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WN++V + NGY + +F +++ GI P+ T V LL CT GL +
Sbjct: 307 LVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHA 366
Query: 358 SMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ R F+ +I +++L + G+L+ + ++ + + + + I W A+LAG +H
Sbjct: 367 YIHRCGFNADIIIA--TALLNLYAKLGRLNASEDIFEEIK-DRDTIAWTAMLAGYAVH 421
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/579 (41%), Positives = 340/579 (58%), Gaps = 43/579 (7%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADAL 85
F+ TN + K+ H Q+ H+++ + GLD + L Y G L ++
Sbjct: 27 FISTNRLAVLIDKSKTISHLLQI----HAVLFRHGLDHHPILNFKLQRSYASLGRLDYSV 82
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+F + +V WTAII G+ G++ A +F + P+
Sbjct: 83 ALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTM------PE--------------- 121
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
+++ T+++ YAK G ++ AR +FD M E+D V W+ MI
Sbjct: 122 ------------------KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMID 163
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GY NG P EAL +F M + KP T++ VLSAC LGALE G W S++E N
Sbjct: 164 GYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQF 223
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
N +GT L+DMY+KCG + A VF ++ DKD V WN+++ G +M+G+ + A +F +
Sbjct: 224 NVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMC 283
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
+ G+ P TF+G+L C H+G V EG FN M + + P IEHYGCMV+LLGR+G +
Sbjct: 284 RMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHV 343
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
++A+EL+K+M +EP+ ++WG LL CRLH K L E ++ L+ NSG Y+LLSNIY
Sbjct: 344 EQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIY 403
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+A W+ A++R+MM D G++K GCS +EV+ VHEFL G +HP ++IY L+E+
Sbjct: 404 AAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEIN 463
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
LK+ G+ P TD VL DI E EK+ L HSEKLA+AFGLI T P I+I KNLRVC
Sbjct: 464 GWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCA 523
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCHE KLISKITGR+I+VRD NRFH F+ GSCSC D+W
Sbjct: 524 DCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 4/207 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N A+ + M P T VL AC + + G HS I G
Sbjct: 161 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNG 220
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + V T+L+++Y CG L DA VFD I DK+VV+W ++I GY G +EA+ +F+
Sbjct: 221 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFK 280
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW--IHGYVNEAGKGRNVFVATSLVDLYAK 178
+ GL P + + + +L+AC G + T W + +E G + +V+L +
Sbjct: 281 SMCRMGLHPTNITFIGILSACGHSGWV-TEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGR 339
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMI 204
G++E+A + M E D V W +++
Sbjct: 340 AGHVEQAYELVKNMNIEPDPVLWGTLL 366
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/603 (39%), Positives = 353/603 (58%), Gaps = 36/603 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR +V+N ++ I+ + +M + P ++TFP VLKAC+ + +G + H K G
Sbjct: 112 MIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVG 171
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L FV L+++Y CG+L++A V D++ ++VVSW ++++GY ++A+ + R
Sbjct: 172 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCR 231
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + D+ ++ +L A +
Sbjct: 232 EMESVKISHDAGTMASLLPAVSN---------------------------------TTTE 258
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ + +F +M +K +VSW+ MI Y N P EA++++ M+ + +P+ ++ VL
Sbjct: 259 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLP 318
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC AL LG ++ER + + N +L LIDMYAKCG + +A VF MK +D V
Sbjct: 319 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVS 378
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++S +G A +F +++ G+ P+ FV L C+HAGL++EGR F M+
Sbjct: 379 WTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 438
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ +TP +EH CMVDLLGR+G++ EA++ I+ MPMEPN VWGALL CR+H TD+
Sbjct: 439 DHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIG 498
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
++L L P SG YVLLSNIY+ + +W + IR++M KG++K G S VEV+ +
Sbjct: 499 LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRI 558
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H FLVGD SHP S +IY +LD L K+K G+VP ++ L D+EEE+K+ LA HSEKL
Sbjct: 559 IHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKL 618
Query: 541 ALAFGLITTAPKD---VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
A+ F L+ T +D IRI KNLR+CGDCH A KLIS+IT REII+RD NRFH F G
Sbjct: 619 AIVFALMNTEEEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGV 678
Query: 598 CSC 600
CSC
Sbjct: 679 CSC 681
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 6/269 (2%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
DL T + +H + N + L+ YA ++ AR+VFD++PE++++ + MI+
Sbjct: 55 DLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIR 114
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
Y +NGF +E + +F M ++KP++YT VL AC+ G + +G + S
Sbjct: 115 SYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSS 174
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+G L+ MY KCG +++A V EM +D V WN++V+G + N A V ++E
Sbjct: 175 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREME 234
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
I + T LL ++ E + M ++ + M+ + ++
Sbjct: 235 SVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS-WNVMIGVYMKNAMP 291
Query: 386 DEAHELIKSMP---MEPNAIVWGALLAGC 411
EA EL M EP+A+ ++L C
Sbjct: 292 VEAVELYSGMEADGFEPDAVSITSVLPAC 320
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/569 (42%), Positives = 354/569 (62%), Gaps = 38/569 (6%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T+++ Y L A + FD +P+++VVSW A++SGY G EE + +F +++ G++
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIE 257
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
PD + V V++AC+ GD A + +++ N FV T+L+D+YAKCG++ ARR+
Sbjct: 258 PDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRI 317
Query: 189 FDQ--------------------------------MPEKDIVSWSSMIQGYASNGFPKEA 216
FD+ MP +++V+W+SMI GYA NG A
Sbjct: 318 FDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMA 377
Query: 217 LDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
+++F M + L P+ TMV V+SAC LGALELG W F+ N+ + +I
Sbjct: 378 IELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIF 437
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MY++CG M A +VF+EM +D V +N ++SG + +G+ A + +++ GI+P+ T
Sbjct: 438 MYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVT 497
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
F+G+L C+HAGL++EGR+ F S+ P I+HY CMVDLLGR G+L++A ++ M
Sbjct: 498 FIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERM 552
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
PMEP+A V+G+LL R+HK+ +L E N+L LEP NSGN++LLSNIY+++ +W D
Sbjct: 553 PMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVE 612
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
+IR M G++K G SWVE G +H+F+V D SH S+ IY L EL K++ AG++
Sbjct: 613 RIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIA 672
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
VL D+EEEEK+ + HSEKLA+ + L+ + VIR+ KNLRVC DCH AIK+IS
Sbjct: 673 DKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMIS 732
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K+ GR IIVRDNNRFHCF +G CSCKD+W
Sbjct: 733 KLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 199/452 (44%), Gaps = 87/452 (19%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+R + + + M+ G P F +P ++K+ G+ H+ ++K G
Sbjct: 71 MLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNG-----GIGFHAHVLKLG 125
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYI---NEGNLEEA 115
D FV+ +++++Y G + A KVFD+IPD + V W A++SGY +EG
Sbjct: 126 HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQ---- 181
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
A+W+ + E RNV T++V
Sbjct: 182 ----------------------------------AQWLFDVMPE----RNVITWTAMVTG 203
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
YAK ++E ARR FD MPE+ +VSW++M+ GYA NG +E L +F M ++P+ T
Sbjct: 204 YAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTW 263
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE--- 292
V V+SAC+S G L + + + N + T L+DMYAKCG + A ++F E
Sbjct: 264 VTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGA 323
Query: 293 -----------------------------MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
M ++ V WN++++G + NG +A +F +
Sbjct: 324 YRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKE 383
Query: 324 LEKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
+ + P+ T V ++ C H G ++ G ++ + I + M+ + R
Sbjct: 384 MITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTE-NQIKLSISGHNAMIFMYSRC 442
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
G +++A + + M + + + L++G H
Sbjct: 443 GSMEDAKRVFQEMATR-DVVSYNTLISGFAAH 473
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 164/328 (50%), Gaps = 41/328 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ N + + ++ M N G P T+ V+ AC+ D L + +
Sbjct: 231 MLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQ 290
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDI----------------------------- 91
+ + FV+T+LL++Y CG + A ++FD++
Sbjct: 291 IQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELF 350
Query: 92 ---PDKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDL 147
P +NVV+W ++I+GY G AI +F+ ++ + L PD ++V V++AC LG L
Sbjct: 351 NTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGAL 410
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
W+ ++ E ++ +++ +Y++CG+ME A+RVF +M +D+VS++++I G+
Sbjct: 411 ELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGF 470
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A++G EA+++ M+ ++P+ T +GVL+AC+ G LE G + E + +P
Sbjct: 471 AAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEG------RKVFESIKDP 524
Query: 268 VLG--TTLIDMYAKCGRMAQACKVFREM 293
+ ++D+ + G + A + M
Sbjct: 525 AIDHYACMVDLLGRVGELEDAKRTMERM 552
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 158/405 (39%), Gaps = 75/405 (18%)
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
GN + +++H L ++ + ++ CT+L + + H N NVFV
Sbjct: 12 GNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRL--RAPPHYTHLLFNST-LNPNVFVF 68
Query: 170 TSLVDLYAKCGNMEKARRVFDQMP----EKDIVSWSSMIQ----------------GYAS 209
TS++ Y+ + K +F+ M D + +I+ G+ S
Sbjct: 69 TSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGIGFHAHVLKLGHGS 128
Query: 210 NGFPKEA-LDMFYNM-----QRENLK--PEYYTMVGVLSACASLGALELGVWASSFMERN 261
+ F + A +DM+ + R+ P+Y V A A+ G W +
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKV------ADWNAMVSGYWKWESEGQA 182
Query: 262 EFL------SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
++L N + T ++ YAK + A + F M ++ V WNA++SG + NG +
Sbjct: 183 QWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAE 242
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR------VFSLTPMI 369
+F ++ GI+P+ T+V ++ C+ G ++ + F T ++
Sbjct: 243 EVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALL 302
Query: 370 EHYG-------------------------CMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
+ Y M+ R G LD A EL +MP N + W
Sbjct: 303 DMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGR-NVVTW 361
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+++AG + ++ +A + ++I + ++S I + H
Sbjct: 362 NSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGH 406
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/609 (40%), Positives = 367/609 (60%), Gaps = 8/609 (1%)
Query: 4 GFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQL--GVRSHSLIVKAGL 61
F N C A+ F+ M G P TF +L A A+ + G H +GL
Sbjct: 3 AFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGL 62
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ V T+++++Y CG L DA F+++ KN V+W A+++ Y +G EA+ +FR
Sbjct: 63 LPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFRE 122
Query: 122 LLHRG--LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK--GRNVFVATSLVDLYA 177
+ R +PD FS + AC+ L DL + IH + GK ++V V T+L+++Y+
Sbjct: 123 MCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYS 182
Query: 178 KCGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTM 235
KCG++E+AR+VFD + + D V W++MI YA +G K+ALD++ +M +L P+ T
Sbjct: 183 KCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTF 242
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
V V+ CA L AL+ G + + F +N ++ L+ MY KCG + +A VF MK
Sbjct: 243 VTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKL 302
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
KD++ WN ++S + +G+ A ++ +++ G++P TFVGLL C+H GLV +G +
Sbjct: 303 KDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDY 362
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F M + P + H+GC++DLLGR G+L EA ++KSMP++ NA+ W +LL C+ H
Sbjct: 363 FYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHG 422
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
+Q++ PW SG YVLLSNIY+A+ +W D KIR +M +G++K G SW+
Sbjct: 423 DLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWI 482
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
E+ VVHEF+ GD SHP E+IY +L ++ ++K G+VP T V D+EEEEK+ L C
Sbjct: 483 EIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVC 542
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+ +G + K ++RI KNLRVC DCH A K +S+ITGR+I+VRD RFH F
Sbjct: 543 HSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFEN 602
Query: 596 GSCSCKDFW 604
GSCSC+D+W
Sbjct: 603 GSCSCRDYW 611
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 171/326 (52%), Gaps = 10/326 (3%)
Query: 103 ISGYINEGNLEEAINMFRRLLHRGLKPD--SFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
++ + + G EA+ FRR+ G +PD +FS++ A + + IH Y +
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
G NV V T+++ +Y KCG ++ AR F+++ K+ V+W++M+ Y +G +EAL++F
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120
Query: 221 YNM--QRENLKPEYYTMVGVLSACASLGALELGVWASSFMER--NEFLSNPVLGTTLIDM 276
M + + +P+ ++ + AC++L LE G + R E + V+GT L++M
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180
Query: 277 YAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQPNGN 334
Y+KCG + +A KVF ++ D D V WNA+++ + +G K A ++ + + + P
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
TFV ++ C + +GR ++ R + + +V + G+ G LDEA ++ S
Sbjct: 241 TFVTVIDVCAELSALKQGRA-IHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHS 299
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLA 420
M ++ + I W +++ H +D A
Sbjct: 300 MKLK-DEISWNTIISSYAYHGHSDQA 324
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/509 (45%), Positives = 334/509 (65%), Gaps = 3/509 (0%)
Query: 84 ALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGL-KPDSFSIVRVLTAC 141
A KVF I NV W +I GY GN A +++R + GL +PD+ + ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
T + D+ + IH V +G G ++V SL+ LYA CG++ A +VFD+MPEKD+V+W+
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
S+I G+A NG P+EAL ++ M + +KP+ +T+V +LSACA +GAL LG +M +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
N L+D+YA+CGR+ +A +F EM DK+ V W +++ GL++NG+ K A +F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 322 GQLEKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
+E G+ P TFVG+L C+H G+V EG ++F M + + P IEH+GCMVDLL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
R+GQ+ +A+E IKSMPM+PN ++W LL C +H +DLAE Q++ LEP +SG+YVL
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 441 LSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSK 500
LSN+Y++ +W+D KIR M G++K+ G S VEV VHEFL+GD SHP S+ IY+K
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 501 LDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKN 560
L E+ +L++ G+VP +V D+EEEEK+ + HSEK+A+AF LI+T + I + KN
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551
Query: 561 LRVCGDCHEAIKLISKITGREIIVRDNNR 589
LRVC DCH AIKL+SK+ REI+VRD +R
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSR 580
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 203/337 (60%), Gaps = 8/337 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRG+ A Y MR G + P T+PF++KA D +LG HS+++++
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G +V+ SLL+LY +CG +A A KVFD +P+K++V+W ++I+G+ G EEA+ ++
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G+KPD F+IV +L+AC ++G L+ K +H Y+ + G RN+ + L+DLYA+C
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGV 238
G +E+A+ +FD+M +K+ VSW+S+I G A NGF KEA+++F M+ E L P T VG+
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK 296
L AC+ G ++ G M R E+ P + ++D+ A+ G++ +A + + M +
Sbjct: 331 LYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 389
Query: 297 DQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
VV W ++ +++G +A F +++ ++PN
Sbjct: 390 PNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPN 424
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/607 (39%), Positives = 371/607 (61%), Gaps = 7/607 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ +N A+ + SMR + +F ++K CA + + + H +VK G
Sbjct: 270 MISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYG 329
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-KNVVSWTAIISGYINEGNLEEAINMF 119
D+ ++T+L+ Y C + DAL++F + NVVSWTA+ISG++ EEA+ +F
Sbjct: 330 FVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLF 389
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G++P+ F+ +LTA + + +H V + R+ V T+L+D Y K
Sbjct: 390 SEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAYVKL 445
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +++A +VF + KDIV+WS+M+ GYA G + A+ +F + + +KP +T +L
Sbjct: 446 GKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSIL 505
Query: 240 SACASLGA-LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+ CA+ A + G F ++ S+ + + L+ MYAK G + A +VF+ ++KD
Sbjct: 506 NVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDL 565
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WN+++SG + +G A VF +++K ++ + TF+G+ CTHAGLV+EG ++F+
Sbjct: 566 VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDI 625
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M R + P EH CMVDL R+GQL++A ++I +MP + +W +LA CR+HKKT+
Sbjct: 626 MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTE 685
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L ++IA+ P +S YVLLSN+Y+ S W + AK+R +M ++ ++K G SW+EV
Sbjct: 686 LGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVK 745
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
+ FL GD SHPL ++IY KL++L+T+LK G+ P T +VL DI++E K+ LA HSE
Sbjct: 746 NKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSE 805
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF-IEGS 597
+LA+AFGLI T + I KNLRVCGDCH IKLI+KI REI+VRD+NRFH F +G
Sbjct: 806 RLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGV 865
Query: 598 CSCKDFW 604
CSC DFW
Sbjct: 866 CSCGDFW 872
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 216/435 (49%), Gaps = 21/435 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GF + Q A + ++++ G F VLK A D G + H +K G
Sbjct: 68 LLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFG 127
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V TSL++ Y+ D VFD++ ++NVV+WT +ISGY EE + +F
Sbjct: 128 FLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFM 187
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G +P+SF+ L + G +H V + G + + V+ SL++LY KCG
Sbjct: 188 RMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCG 247
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ KAR +FD+ K +V+W+SMI GYA+NG EAL MFY+M+ +++ + ++
Sbjct: 248 NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIK 307
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CA+L L + + F+ + + T L+ Y+KC M A ++F+E VV
Sbjct: 308 LCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVV 367
Query: 301 -WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC-------THAGLVDEG 352
W A++SG N + A G+F ++++ G++PN T+ +L HA +V
Sbjct: 368 SWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTN 427
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+ +++ ++D + G++DEA ++ + + + W A+LAG
Sbjct: 428 YERSSTVGT------------ALLDAYVKLGKVDEAAKVFSGID-NKDIVAWSAMLAGYA 474
Query: 413 LHKKTDLAEHVLNQL 427
+T+ A + ++L
Sbjct: 475 QAGETEAAIKIFSEL 489
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 160/338 (47%), Gaps = 23/338 (6%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A +FD PD++ S+T+++ G+ +G +EA +F + H G++ D VL
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L D + +H + G +V V TSLVD Y K N + R VFD+M E+++V+W+++
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I GYA N +E L +F MQ E +P +T L A G G+ + + +N
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 229
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ +LI++Y KCG + +A +F + + K V WN+++SG + NG A G+F
Sbjct: 230 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 289
Query: 324 LEKCGIQPNGNTFVGLLCGCT-----------HAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ ++ + ++F ++ C H +V G F ++ M+ +
Sbjct: 290 MRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTAL----MVAYS 345
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
CM L +A L K N + W A+++G
Sbjct: 346 KCMAML--------DALRLFKETGFLGNVVSWTAMISG 375
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A + A +FD+ P++D S++S++ G++ +G +EA +F N+Q ++ +
Sbjct: 42 ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VL A+L G + FL + +GT+L+D Y K VF EMK++
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER 161
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ V W ++SG + N + +F +++ G QPN TF L G+ G Q
Sbjct: 162 NVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 221
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + L I +++L + G + +A L ++ + + W ++++G
Sbjct: 222 TVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISG 273
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/670 (38%), Positives = 376/670 (56%), Gaps = 66/670 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ F++AI + M ++ PT FT VL +CA +G + HS +VK G
Sbjct: 116 MIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHG 175
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP---------------------------- 92
L V SLLN+Y G A VFD +
Sbjct: 176 LSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFE 235
Query: 93 ---DKNVVSWTAIISGYINEGNLEEAINMFRRLL-HRGLKPDSFSIVRVLTACTQLGDLS 148
+++VVSW A+ISGY G EA+++F ++L KPD F++ L+AC L +L
Sbjct: 236 QMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLK 295
Query: 149 TAKWIHGYV-------------------NEAG--------------KGRNVFVATSLVDL 175
K IH ++ +++G +V T+L+D
Sbjct: 296 LGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDG 355
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y K G++ ARR+FD + +D+V+W++MI GY NGF ++A+++F +M +E KP YT+
Sbjct: 356 YVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTL 415
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK- 294
+LS +SL +L+ G + R+ S+ + LI MYAK G + A VF +
Sbjct: 416 ATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHW 475
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+D + W +++ L+ +G + A +F ++ + GI+P+ T+VG+L CTH GLV++GR
Sbjct: 476 KRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRS 535
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++N M + P HY CM+DL GR+G L EAH I++MP+EP+ I WG+LLA C++H
Sbjct: 536 YYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVH 595
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K +LAE +L+ +EP NSG Y L+N+YSA +W +AA IR M DKG++K +G SW
Sbjct: 596 KNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSW 655
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
V++ VH F V D HP + IY + ++ ++K GFVP T+ VL D+EEE K+ L+
Sbjct: 656 VQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILS 715
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFGLI T +RI KNLRVC DCH AIK ISK+ GREIIVRD RFH F
Sbjct: 716 HHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFK 775
Query: 595 EGSCSCKDFW 604
G CSC+D+W
Sbjct: 776 NGLCSCRDYW 785
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 219/483 (45%), Gaps = 98/483 (20%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P++ F+ ++ + F G H+ I+KAGL F+ +L+N Y G++ DA +V
Sbjct: 12 PSDPYTSFLQRSLKFKDPFT-GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRV 70
Query: 88 FDDIPDKNV-------------------------------VSWTAIISGYINEGNLEEAI 116
FD++P K+V VSWTA+I GY G E AI
Sbjct: 71 FDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAI 130
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
MFR ++ + P F++ VL +C + L + +H +V + G + VA SL+++Y
Sbjct: 131 GMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMY 190
Query: 177 AKCGNMEKARRVFD-------------------------------QMPEKDIVSWSSMIQ 205
AK G+ A+ VFD QM E+D+VSW++MI
Sbjct: 191 AKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMIS 250
Query: 206 GYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GY +GF +EALD+F M + + KP+ +T+ LSACA+L L+LG + + R EF
Sbjct: 251 GYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFD 310
Query: 265 SNPVLGTTLIDMYAKCG--RMAQ-------------------------------ACKVFR 291
+ +G LI MY+K G +AQ A ++F
Sbjct: 311 TFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFD 370
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
++ +D V W A++ G NG+ + A +F + K G +PN T +L + +D
Sbjct: 371 SLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDH 430
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
GRQ S +R + + + ++ + +SG +++A + + + + I W +++
Sbjct: 431 GRQIHASATRSGNASS-VSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIAL 489
Query: 412 RLH 414
H
Sbjct: 490 AQH 492
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/602 (39%), Positives = 357/602 (59%), Gaps = 36/602 (5%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ VL+ CA Q G R HS+I ++ D + + L+ +YV CG L + ++FD +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA---CTQLGDLS 148
++ V W +++GY GN E++++F+R+ G++ RV +A +LGD
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIR-------RVESARKLFDELGDRD 215
Query: 149 TAKW---IHGYVNE--AGKGRNVF---------------------VATSLVDLYAKCGNM 182
W I GYV+ + KG ++F + L+D+Y+K GN+
Sbjct: 216 VISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNL 275
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
A +VF+ M E+ +VSW+SMI GYA G ++ +F+ M++E+L P TM +L AC
Sbjct: 276 NSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPAC 335
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
ASL ALE G + RN F + + L+DMY KCG + A +F + +KD V W
Sbjct: 336 ASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWT 395
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
+++G M+GY A F ++ GI+P+ +F+ +L C+H+GL+DEG FFN M
Sbjct: 396 VMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNN 455
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ P EHY C+VDLL R+G L +A++ IK MP+EP+A +WGALL GCR++ LAE
Sbjct: 456 CCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEK 515
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
V + LEP N+G YVLL+NIY+ + KW + K+R +G +G++K GCSW+E+ G VH
Sbjct: 516 VAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVH 575
Query: 483 EFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
F+ GD+SHPL+ KI L + T++K G P + L ++ EK+ L HSEK+A+
Sbjct: 576 IFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAM 635
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
AFG+++ P +R+ KNLRVCGDCHE K +SK+ R+II+RD+NRFH F +GSCSC+
Sbjct: 636 AFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRG 695
Query: 603 FW 604
W
Sbjct: 696 HW 697
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 120/251 (47%), Gaps = 13/251 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ ++ ++ M E P + T +L ACA + G H I++ G
Sbjct: 296 MIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNG 355
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V +L+++Y+ CG L A +FD IP+K++VSWT +I+GY G EAI F
Sbjct: 356 FSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFN 415
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS----LVDLY 176
+ + G++PD S + +L AC+ G L W G+ N + + +VDL
Sbjct: 416 EMRNSGIEPDEVSFISILYACSHSGLLDEG-W--GFFNMMRNNCCIEPKSEHYACIVDLL 472
Query: 177 AKCGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPEY 232
A+ GN+ KA + MP E D W +++ G Y ++ + + ++ EN Y
Sbjct: 473 ARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTG--Y 530
Query: 233 YTMVGVLSACA 243
Y ++ + A A
Sbjct: 531 YVLLANIYAEA 541
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 119/252 (47%), Gaps = 24/252 (9%)
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASS 256
I ++ I + G + A+++ + +L E T VL CA L +++ G S
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELINQSPKPDL--ELRTYCSVLQLCADLKSIQDGRRIHS 125
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
++ N+ + VLG+ L+ MY CG + + ++F ++ ++ +WN +++G + G +
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRE 185
Query: 317 AFGVFGQLEKCGIQPNGN--------------TFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
+ +F ++ + GI+ + ++ ++ G GL ++G F M +
Sbjct: 186 SLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLL 245
Query: 363 ---FSLTPMIE----HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
L M+ C++D+ +SG L+ A ++ ++M E + + W +++AG
Sbjct: 246 GINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTSMIAGYAREG 304
Query: 416 KTDLAEHVLNQL 427
+D++ + +++
Sbjct: 305 LSDMSVRLFHEM 316
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/673 (38%), Positives = 375/673 (55%), Gaps = 70/673 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACARE-HDFQLGVRSHSLIVKA 59
MI GF N+ AI + M++EGF P +FT+ VL A D + V+ H+ +K+
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKS 178
Query: 60 GLDCDEFVKTSLLNLYVHCG----YLADALKVFDDIPDKNVVSWT--------------- 100
G V +L+++Y C L A KVFDDIP+K+ SWT
Sbjct: 179 GAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLG 238
Query: 101 -----------------AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A+ISGY+N G +EA+ M RR++ G++ D F+ V+ AC
Sbjct: 239 KELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACAN 298
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L K +H YV + + SLV LY KCG +AR +F++MP KD+VSW+++
Sbjct: 299 ARLLQLGKQVHAYVLRR-EDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNAL 357
Query: 204 IQGY-------------------------------ASNGFPKEALDMFYNMQRENLKPEY 232
+ GY A NGF +E L +F M+RE +P
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD 417
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
Y G + +CA LGA G + + + F S+ G LI MYAKCG + +A +VFR
Sbjct: 418 YAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRT 477
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M D V WNA+++ L +G+ A V+ ++ K GI+P+ TF+ +L C+HAGLVD+G
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQG 537
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
R++FNSM V+ + P +HY ++DLL RSG+ EA +I+S+P +P A +W ALL+GCR
Sbjct: 538 RKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCR 597
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
+H +L ++L L P + G Y+LLSN+Y+A+ +W + A++R +M D+G++K C
Sbjct: 598 VHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVAC 657
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEE-EKQY 531
SW+E++ VH FLV D SHP +E +Y L +L +++ G+VP T VL D+E + K+
Sbjct: 658 SWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKED 717
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L HSEK+A+AFGL+ P IRI KNLR CGDCH + +SK+ R+II+RD RFH
Sbjct: 718 MLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFH 777
Query: 592 CFIEGSCSCKDFW 604
F G CSC +FW
Sbjct: 778 HFRNGECSCGNFW 790
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 198/439 (45%), Gaps = 77/439 (17%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRR 121
D+ +T++++ Y G +A A VF++ P ++ V + A+I+G+ + + AIN+F +
Sbjct: 79 DKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 122 LLHRGLKPDSFSIVRVLTACTQL-GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ H G KPD F+ VL + D H ++G G V+ +LV +Y++C
Sbjct: 139 MKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCA 198
Query: 181 N----MEKARRVFDQMPEKDIVSWSSMIQGYASN-------------------------- 210
+ + AR+VFD +PEKD SW++M+ GY N
Sbjct: 199 SSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMI 258
Query: 211 ------GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G +EAL+M M ++ + +T V+ ACA+ L+LG +++ R E
Sbjct: 259 SGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDF 318
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV-------------------- 304
S +L+ +Y KCG+ +A +F +M KD V WNA+
Sbjct: 319 SFH-FDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 305 -----------VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
+SGL+ NG+ + +F +++ G +P F G + C G G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
QF + ++ + ++ + + G ++EA ++ ++MP +++ W AL+A
Sbjct: 438 QFHAQLVKI-GFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPC-LDSVSWNALIAALGQ 495
Query: 414 H----KKTDLAEHVLNQLI 428
H + D+ E +L + I
Sbjct: 496 HGHGVEAVDVYEEMLKKGI 514
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 141/336 (41%), Gaps = 77/336 (22%)
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE------------ 194
L A+ +HG + G + + L+D+Y K ++ AR++FD++ E
Sbjct: 30 LQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSG 89
Query: 195 ---------------------KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
+D V +++MI G++ N A+++F M+ E KP+ +
Sbjct: 90 YCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDF 149
Query: 234 TMVGVLSACASLGALE---LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR----MAQA 286
T VL+ A + E + A++ ++++ + L+ +Y++C + A
Sbjct: 150 TYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTS--VSNALVSVYSRCASSPSLLHSA 207
Query: 287 CKVFREMKDKDQVVW--------------------------------NAVVSGLSMNGYV 314
KVF ++ +KD+ W NA++SG G
Sbjct: 208 RKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLY 267
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
+ A + ++ GI+ + T+ ++ C +A L+ G+Q + R + ++
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDN--S 325
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+V L + G+ +EA + + MP + + + W ALL+G
Sbjct: 326 LVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSG 360
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 255/640 (39%), Positives = 370/640 (57%), Gaps = 49/640 (7%)
Query: 14 AIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+ ++ M + P + +L ACA G + H +++GL D FV +++
Sbjct: 347 ALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVV 406
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE------------------- 113
++Y CG + +A KVF + K+VVSW A+++GY G LE
Sbjct: 407 DMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVV 466
Query: 114 ----------------EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY- 156
EA+++FR++ G +P+ ++V +L+AC +G L K H Y
Sbjct: 467 TWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYA 526
Query: 157 ----VNEAGK---GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD--IVSWSSMIQGY 207
+N G ++ V L+D+YAKC + E AR++FD + KD +V+W+ MI GY
Sbjct: 527 IKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGY 586
Query: 208 ASNGFPKEALDMFYNMQR--ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
A +G AL +F M + +++KP +T+ L ACA L AL G +++ RN + S
Sbjct: 587 AQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGS 646
Query: 266 NPV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ + LIDMY+K G + A VF M ++ V W ++++G M+G + A VF ++
Sbjct: 647 VMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEM 706
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
K + P+G TF+ +L C+H+G+VD G FFN MS+ F + P EHY CMVDL GR+G+
Sbjct: 707 RKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGR 766
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
L EA +LI MPMEP +VW ALL+ CRLH +L E N+L+ LE N G+Y LLSNI
Sbjct: 767 LGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNI 826
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+ + +W D A+IR M GI+K GCSW++ V F VGD SHP S++IY L +L
Sbjct: 827 YANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADL 886
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
++KA G+VP T L D+++EEK L HSEKLALA+G++T P+ IRI KNLR+C
Sbjct: 887 IQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRIC 946
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
GDCH AI ISKI EII+RD++RFH F GSCSCK +W
Sbjct: 947 GDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 238/487 (48%), Gaps = 59/487 (12%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
Y M++ G+ P ++TFPFV KACA LG H+ + ++G + FV +++++Y
Sbjct: 246 LYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYG 305
Query: 77 HCGYLADALKVFDDIPDKNV---VSWTAIISGYINEGNLEEAINMFRRLLHRGL-KPDSF 132
CG L A +FDD+ + + VSW +++S Y+ + A+ +F ++ R L PD
Sbjct: 306 KCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVI 365
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
S+V +L AC L + +HG+ +G +VFV ++VD+YAKCG ME+A +VF +M
Sbjct: 366 SLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRM 425
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL------------------------ 228
KD+VSW++M+ GY+ G + AL +F M EN+
Sbjct: 426 KFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEAL 485
Query: 229 -----------KPEYYTMVGVLSACASLGAL----ELGVWASSFMERNEFLSNPVLGTT- 272
+P T+V +LSAC S+GAL E +A F+ L P G
Sbjct: 486 DVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILN---LDGPDPGADD 542
Query: 273 ------LIDMYAKCGRMAQACKVFREM--KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
LIDMYAKC A K+F + KD+D V W ++ G + +G A +F +
Sbjct: 543 LKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGM 602
Query: 325 EKC--GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
K I+PN T L C + GRQ + R F + M+ C++D+ +S
Sbjct: 603 FKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKS 662
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLS 442
G +D A + +MP + NA+ W +L+ G +H + + A V +++ + P L
Sbjct: 663 GDVDTAQIVFDNMP-QRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKV-PLVPDGITFLV 720
Query: 443 NIYSASH 449
+Y+ SH
Sbjct: 721 VLYACSH 727
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 190/414 (45%), Gaps = 49/414 (11%)
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIPDK--NVVSWTAIISGYINEGNLEEAINMFRRLLH 124
+ T+L+ Y+ A A+ + + +P +V W +I ++ G+ + ++R++
Sbjct: 193 LATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKS 252
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G PD ++ V AC L LS +H V+ +G NVFV ++V +Y KCG +
Sbjct: 253 LGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRH 312
Query: 185 ARRVFDQMPEK---DIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLS 240
A +FD + + D+VSW+S++ Y AL +F+ M R + P+ ++V +L
Sbjct: 313 AHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILP 372
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL A G F R+ + + +G ++DMYAKCG+M +A KVF+ MK KD V
Sbjct: 373 ACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVS 432
Query: 301 WNAVVSGLS------------------------------MNGYVKV-----AFGVFGQLE 325
WNA+V+G S + GY + A VF Q+
Sbjct: 433 WNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMC 492
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQ-------FFNSMSRVFSLTPMIEHYGCMVDL 378
CG +PN T V LL C G + G++ F ++ ++ ++D+
Sbjct: 493 DCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDM 552
Query: 379 LGRSGQLDEAHELIKSM-PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
+ + A ++ S+ P + + + W ++ G H + A + + + ++
Sbjct: 553 YAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMD 606
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G+ + +A++ ++ M ++ P +FT L ACAR + G + H+ +++
Sbjct: 582 MIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR 641
Query: 59 AGL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
FV L+++Y G + A VFD++P +N VSWT++++GY G E+A+
Sbjct: 642 NFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALR 701
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG--YVNEAGKGRNVFVATS---- 171
+F + L PD + + VL AC+ G + HG + N K V
Sbjct: 702 VFDEMRKVPLVPDGITFLVVLYACSHSGMVD-----HGINFFNRMSKDFGVDPGPEHYAC 756
Query: 172 LVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMIQG 206
+VDL+ + G + +A ++ ++MP E V W +++
Sbjct: 757 MVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSA 792
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 139/304 (45%), Gaps = 14/304 (4%)
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK-- 195
+TA + L+ AK +H +G +AT+L+ Y + A + +++P
Sbjct: 165 ITALKECNSLAHAKLLHQ--QSIMQGLLFHLATNLIGTYIASNSTAYAILLLERLPPSPS 222
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
+ W+ +I+ G P++ ++ M+ P++YT V ACA+L +L LG
Sbjct: 223 SVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLH 282
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK---DQVVWNAVVSGLSMNG 312
+ + R+ F SN + ++ MY KCG + A +F ++ + D V WN+VVS
Sbjct: 283 ATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWAS 342
Query: 313 YVKVAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
A +F ++ + + P+ + V +L C GRQ + S L +
Sbjct: 343 DANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQV-HGFSIRSGLVDDVFV 401
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC----RLHKKTDLAEHVLNQL 427
+VD+ + G+++EA+++ + M + + + W A++ G RL L E + +
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKFK-DVVSWNAMVTGYSQAGRLEHALSLFERMTEEN 460
Query: 428 IALE 431
I L+
Sbjct: 461 IELD 464
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/636 (37%), Positives = 380/636 (59%), Gaps = 33/636 (5%)
Query: 1 MIRGFVSNDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+ + + A++ F+ +R+E +P + T V+ ACA+ D + G + + I +
Sbjct: 205 MICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDS 264
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G++ ++ + ++L+++Y+ C + A ++FD+ N+ A+ S Y+ +G +EA+ +
Sbjct: 265 GIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVL 324
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G++PD S++ +++C+QL ++ K HGYV G + +L+D+Y KC
Sbjct: 325 NLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 384
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNG-----------FPK-------------- 214
+ A R+FD+M K +V+W+S++ GY NG P+
Sbjct: 385 HRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALV 444
Query: 215 ------EALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
EA+++F+ MQ +E + + TM+ + SAC LGAL+L W ++E+N +
Sbjct: 445 QENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDV 504
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
LGTTL+DM+++CG A +F + ++D W A + ++M G V+ A +F ++ +
Sbjct: 505 RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQ 564
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++P+G F+G L C H GLV +G++ FNSM ++ ++P HYGCMVDLLGR+G L+E
Sbjct: 565 GLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEE 624
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A +LIK MP EPN ++W +LLA CR+ ++A ++ L P +G+YVLLSN+Y++
Sbjct: 625 ALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYAS 684
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WND AK+R M +KG++K G S +++ G HEF GD SHP KI + LDEL+ +
Sbjct: 685 AGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQR 744
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
G VP +VL D++E+EK + L+ HSEKLA+AFGLI++ IRI KNLRVC C
Sbjct: 745 ASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYC 804
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
H K SK+ REII+RDNNRFH +G CSC DF
Sbjct: 805 HSFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 199/360 (55%), Gaps = 5/360 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ S+ + AI + M N G P +TFPF L CA+ D G++ H LI+K
Sbjct: 104 LIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMD 163
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV+ SL++ Y CG L A KVFD++ ++NVVSWT++I GY ++A+++F
Sbjct: 164 YAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFF 223
Query: 121 RLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R++ + P+S ++V V++AC +L DL T + ++ ++ ++G N + ++LVD+Y KC
Sbjct: 224 RMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKC 283
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A+R+FD+ ++ ++M Y G KEAL + M ++P+ +M+ +
Sbjct: 284 NAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAI 343
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
S+C+ L + G ++ RN F S + LIDMY KC R A ++F M +K V
Sbjct: 344 SSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVV 403
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN++V+G NG V A+ F + + I + NT + L + +E + F+ M
Sbjct: 404 TWNSIVAGYIENGEVDAAWETFNTMPEKNI-VSWNTIISAL---VQENMYEEAIEVFHYM 459
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 220/462 (47%), Gaps = 39/462 (8%)
Query: 34 PFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY---LADALKVFDD 90
P LK C + ++ H + K GLD D T L+ G L+ A +VF++
Sbjct: 35 PSSLKNCKTIDELKM---FHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFEN 91
Query: 91 IPDKNVV-SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+ ++I GY + G +EAI +F R+++ G+ PD ++ L+ C + D
Sbjct: 92 GESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGN 151
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
IHG + + +++FV SLV YA+CG ++ AR+VFD+M E+++VSW+SMI GYA
Sbjct: 152 GIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYAR 211
Query: 210 NGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
F K+A+D+F+ M R E++ P TMV V+SACA L LE G F+ + N +
Sbjct: 212 REFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDL 271
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ + L+DMY KC + A ++F E + + NA+ S G K A GV + G
Sbjct: 272 MISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSG 331
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY----GCMVDLLGRSGQ 384
I+P+ + + + C+ + G+ + L E + ++D+ + +
Sbjct: 332 IRPDRISMLSAISSCSQLRNILWGKSCHG-----YVLRNGFESWDNICNALIDMYMKCHR 386
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
D A + M + W +++AG + + D A W + N + NI
Sbjct: 387 QDTAFRIFDRMS-NKTVVTWNSIVAGYIENGEVDAA------------WETFNTMPEKNI 433
Query: 445 YSASHKWND--AAKIRSMMGDKGIQ---KIRGCSWVEVDGVV 481
S WN +A ++ M ++ I+ ++ V VDGV
Sbjct: 434 VS----WNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVT 471
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/628 (39%), Positives = 362/628 (57%), Gaps = 35/628 (5%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
Q + + M G P +L AC++ D + G H VK G+ D FV T+L
Sbjct: 325 QKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTAL 384
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+NLY +C + +A VFD +P +NVV+W ++ S Y+N G ++ +N+FR ++ G+KPD
Sbjct: 385 VNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDL 444
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+++ +L AC+ L DL + K IHG+ G +VFV +L+ LYAKC + +A+ VFD
Sbjct: 445 VTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDL 504
Query: 192 MPEKDIVSWSSMIQGY-----------------------------------ASNGFPKEA 216
+P +++ SW+ ++ Y N +EA
Sbjct: 505 IPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEA 564
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
+++F MQ KP+ T+ +L AC+ L +G ++ R+ + L+DM
Sbjct: 565 MEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDM 624
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
YAKCG ++ + VF M KD WN ++ M+G K A +F ++ ++P+ TF
Sbjct: 625 YAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATF 684
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
+L C+H+ LV+EG Q FNSMSR + P EHY C+VD+ R+G L+EA+ I+ MP
Sbjct: 685 TCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMP 744
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAK 456
MEP AI W A LAGCR++K +LA+ +L ++P S NYV L NI + W++A+K
Sbjct: 745 MEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASK 804
Query: 457 IRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
IR +M ++GI K GCSW V VH F+ GD S+ S+KIY+ LDEL K+KAAG+ P
Sbjct: 805 IRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPD 864
Query: 517 TDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISK 576
TD+VL DI++EEK L HSEKLA+AFG++ + IR+ KNLR+CGDCH AIK +S
Sbjct: 865 TDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSN 924
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ G I+VRD+ RFH F G+CSCKDFW
Sbjct: 925 VVGVTIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 191/348 (54%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
Q + + M +G P T +L AC+ D + G H +K G+ + FV +L
Sbjct: 224 QKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNAL 283
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+NLY C + +A VFD +P +NV++W ++ S Y+N G ++ +N+FR + G+KPD
Sbjct: 284 VNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDP 343
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++ +L AC+QL DL + K IHG+ + G +VFV T+LV+LYA C + +A+ VFD
Sbjct: 344 MAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDL 403
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
MP +++V+W+S+ Y + GFP++ L++F M +KP+ TM+ +L AC+ L L+ G
Sbjct: 404 MPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG 463
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
F R+ + + + L+ +YAKC + +A VF + ++ WN +++ N
Sbjct: 464 KVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTN 523
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+ +F Q+ + ++ + T+ ++ GC ++E + F M
Sbjct: 524 KEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKM 571
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 186/342 (54%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
Q + + M T +L C+ D + G H +V+ G+ D FV ++
Sbjct: 123 QQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAF 182
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+N Y C + +A VFD +P ++VV+W ++ S Y+N G ++ +N+FR ++ G+KPD
Sbjct: 183 VNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDP 242
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++ +L+AC+ L DL + K IHG+ + G NVFV+ +LV+LY C + +A+ VFD
Sbjct: 243 VTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDL 302
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
MP +++++W+S+ Y + GFP++ L++F M +KP+ M +L AC+ L L+ G
Sbjct: 303 MPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG 362
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
F ++ + + + T L+++YA C + +A VF M ++ V WN++ S
Sbjct: 363 KTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNC 422
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
G+ + VF ++ G++P+ T + +L C+ + G+
Sbjct: 423 GFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGK 464
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 202/401 (50%), Gaps = 16/401 (3%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
AI+ Y S R G P F V KACA D + H + G+ D + + ++
Sbjct: 24 AIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIH 83
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
Y C + A +VFDD+ ++VV+W ++ + Y+N G ++ +N+FR++ +K + +
Sbjct: 84 AYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLT 143
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+ +L C+ L DL + K IHG+V G +VFV+++ V+ YAKC + +A+ VFD MP
Sbjct: 144 VSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMP 203
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
+D+V+W+S+ Y + GFP++ L++F M + +KP+ T+ +LSAC+ L L+ G
Sbjct: 204 HRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKA 263
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
F ++ + N + L+++Y C + +A VF M ++ + WN++ S G+
Sbjct: 264 IHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGF 323
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF------FNSMSRVFSLTP 367
+ VF ++ G++P+ +L C+ + G+ + VF T
Sbjct: 324 PQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTA 383
Query: 368 MIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
++ Y C+ + EA + MP N + W +L
Sbjct: 384 LVNLYANCLC--------VREAQTVFDLMPHR-NVVTWNSL 415
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 143/309 (46%), Gaps = 11/309 (3%)
Query: 107 INEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNV 166
I G EAI ++ RG+KPD + V AC D K H G +V
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75
Query: 167 FVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE 226
+ + + Y KC +E ARRVFD + +D+V+W+S+ Y + GFP++ L++F M
Sbjct: 76 SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLN 135
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+K T+ +L C+ L L+ G F+ R+ + + + + ++ YAKC + +A
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREA 195
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
VF M +D V WN++ S G+ + VF ++ G++P+ T +L C+
Sbjct: 196 QTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDL 255
Query: 347 GLVDEGRQFFNSMSRVFSLTP-MIEHY---GCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
+ G+ F+L M+E+ +V+L + EA + MP N I
Sbjct: 256 QDLKSGKAIHG-----FALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHR-NVI 309
Query: 403 VWGALLAGC 411
W + LA C
Sbjct: 310 TWNS-LASC 317
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V N + A+E + M+ GF P T +L+AC+ ++G H + +
Sbjct: 551 VIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHW 610
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D +L+++Y CG L+ + VFD +P K+V SW +I GN +EA+++F
Sbjct: 611 KDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFE 670
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG------KGRNVFVA----- 169
++L +KPDS + VL+AC+ H + E G R+ V
Sbjct: 671 KMLLSMVKPDSATFTCVLSACS-----------HSMLVEEGVQIFNSMSRDHLVEPEAEH 719
Query: 170 -TSLVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMIQG 206
T +VD+Y++ G +E+A +MP E ++W + + G
Sbjct: 720 YTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAG 758
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/604 (39%), Positives = 364/604 (60%), Gaps = 52/604 (8%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLY----VHCGYLADALKVFDDIPDKNVVSWTAIISGYI- 107
H++ +K+G D +L +H L A K+F+ +P +N SW II G+
Sbjct: 43 HAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSE 102
Query: 108 -NEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+E AI +F ++ ++P+ F+ VL AC + G + K IHG + G G +
Sbjct: 103 SDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGD 162
Query: 166 VFVATSLVDLYAKCGNMEKAR--------------------------------------- 186
FV ++LV +Y CG M+ AR
Sbjct: 163 EFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLG 222
Query: 187 ------RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+FD+M ++ +VSW++MI GY+ NGF K+A+++F M++ +++P Y T+V VL
Sbjct: 223 DCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLP 282
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A + LG+LELG W + E + + VLG+ LIDMY+KCG + +A VF + ++ +
Sbjct: 283 AISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVIT 342
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A+++G +++G A F ++ + G++P+ ++ LL C+H GLV+EGR++F+ M
Sbjct: 343 WSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMV 402
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V L P IEHYGCMVDLLGRSG LDEA E I +MP++P+ ++W ALL CR+ ++
Sbjct: 403 SVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMG 462
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ V N L+ + P +SG YV LSN+Y++ W++ +++R M +K I+K GCS +++DGV
Sbjct: 463 KRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGV 522
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+HEF+V D+SHP +++I S L E++ KL+ AG+ P T VL ++EEE+K+ L HSEK+
Sbjct: 523 LHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKI 582
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A AFGLI+T+P IRI KNLR+C DCH +IKLISK+ R+I VRD RFH F +GSCSC
Sbjct: 583 ATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSC 642
Query: 601 KDFW 604
D+W
Sbjct: 643 MDYW 646
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 187/367 (50%), Gaps = 50/367 (13%)
Query: 1 MIRGFVSNDCFQHAIE---FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIV 57
+IRGF +D + I FY M +E P FTFP VLKACA+ Q G + H L +
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLAD---------------------------------- 83
K G DEFV ++L+ +YV CG++ D
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 84 -----------ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
A +FD + ++VVSW +ISGY G ++A+ +FR + ++P+
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++V VL A ++LG L +W+H Y ++G + + ++L+D+Y+KCG +EKA VF+++
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
P +++++WS+MI G+A +G +A+D F M++ ++P + +L+AC+ G +E G
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 253 WASSFMERNEFLSNPVLGT-TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSM 310
S M + L + ++D+ + G + +A + M K D V+W A++ M
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRM 455
Query: 311 NGYVKVA 317
G V++
Sbjct: 456 QGNVEMG 462
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 136/302 (45%), Gaps = 44/302 (14%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N F+ A+E + M+ P T VL A +R +LG H +G
Sbjct: 245 MISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSG 304
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D+ + ++L+++Y CG + A+ VF+ +P +NV++W+A+I+G+ G +AI+ F
Sbjct: 305 IRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++P + + +LTAC+ HG G
Sbjct: 365 KMRQAGVRPSDVAYINLLTACS-----------HG------------------------G 389
Query: 181 NMEKARRVFDQMPEKD-----IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
+E+ RR F QM D I + M+ +G EA + NM +KP+
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP---IKPDDVIW 446
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+L AC G +E+G ++ + + + L +MYA G ++ ++ MK+
Sbjct: 447 KALLGACRMQGNVEMGKRVANIL-MDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKE 505
Query: 296 KD 297
KD
Sbjct: 506 KD 507
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 65/333 (19%)
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG----NMEKARRVFDQMP 193
+ C + DLS IH ++G+ R+ A ++ A +++ A ++F+QMP
Sbjct: 30 INNCRTIRDLSQ---IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 194 EKDIVSWSSMIQGYASNGFPKE--ALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALEL 250
+++ SW+++I+G++ + K A+ +FY M E ++P +T VL ACA G ++
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA------------------------ 286
G + F + + + L+ MY CG M A
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 287 -----------------CK----VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
CK +F +M+ + V WN ++SG S+NG+ K A VF +++
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF----NSMSRVFSLTPMIEHYGCMVDLLGR 381
K I+PN T V +L + G ++ G +S R+ + ++D+ +
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG-----SALIDMYSK 321
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
G +++A + + +P E N I W A++ G +H
Sbjct: 322 CGIIEKAIHVFERLPRE-NVITWSAMINGFAIH 353
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/605 (38%), Positives = 365/605 (60%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKA 59
MI G + + ++ + + + LP FT VL+AC+ E + L + H+ +KA
Sbjct: 1007 MISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKA 1066
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G+ D FV T+L+++Y G + +A +F + ++ SW AI+ GYI G+ +A+ ++
Sbjct: 1067 GVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLY 1126
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G + D ++V A L L K IH V + G ++FV + ++D+Y KC
Sbjct: 1127 ILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKC 1186
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ME ARRVF ++P D V+W++MI G NG + AL ++ M+ ++P+ YT ++
Sbjct: 1187 GEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLV 1246
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+ L ALE G + + + +P + T+L+DMYAKCG + A +F+ +
Sbjct: 1247 KACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIA 1306
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ GL+ +G K A F ++ G+ P+ TF+G+L C+H+GLV E + F SM
Sbjct: 1307 SWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSM 1366
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + + P IEHY C+VD L R+G+++EA ++I SMP E +A ++ LL CR+ +
Sbjct: 1367 QKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRET 1426
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ V +L+ALEP +S YVLLSN+Y+A+++W + A R+MM ++K G SWV++
Sbjct: 1427 GKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKN 1486
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F+ GD SH ++ IY+K++ + +++ G+VP TD L D+EEE+K+ L HSEK
Sbjct: 1487 KVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEK 1546
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GL+ T P +R+ KNLRVCGDCH AIK ISK+ REI++RD NRFH F G CS
Sbjct: 1547 LAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICS 1606
Query: 600 CKDFW 604
C D+W
Sbjct: 1607 CGDYW 1611
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 203/416 (48%), Gaps = 38/416 (9%)
Query: 1 MIRGFVSNDCFQH-AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M++ +V + C ++ A+ ++ GF P + T +R+ S +VK
Sbjct: 832 MMKAYV-DTCLEYEAMLLFSEFHRTGFRPDDVT-----------------LRTLSRVVKC 873
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
K ++L L Y A L ++DD +V+ W +S ++ G EA++ F
Sbjct: 874 --------KKNILELKQFKAY-ATKLFMYDD-DGSDVIVWNKALSRFLQRGEAWEAVDCF 923
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+++ + D + V +LT L L K IHG V +G + V V L+++Y K
Sbjct: 924 VDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKA 983
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ +AR VF QM E D++SW++MI G +G + ++ MF ++ R++L P+ +T+ VL
Sbjct: 984 GSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVL 1043
Query: 240 SACASL-GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
AC+SL G L + + + + + T LID+Y+K G+M +A +F D
Sbjct: 1044 RACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDL 1103
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV--DEGRQFF 356
WNA++ G ++G A ++ +++ G + + T V GLV +G+Q
Sbjct: 1104 ASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVN--AAKAAGGLVGLKQGKQIH 1161
Query: 357 N-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ R F+L + ++D+ + G+++ A + +P P+ + W +++GC
Sbjct: 1162 AVVVKRGFNLDLFVT--SGVLDMYLKCGEMESARRVFSEIP-SPDDVAWTTMISGC 1214
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 174/391 (44%), Gaps = 37/391 (9%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALK 86
LP F+ +L+ D LG R+H+ I+ +G D FV +L+ +Y CG L+ A K
Sbjct: 656 LPQCFS---ILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARK 712
Query: 87 VFDDIPDKN--VVSWTAIISGYINEGNLE-EAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
+FD PD N +V+W AI+S + + ++FR L + ++ V C
Sbjct: 713 LFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLL 772
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
S ++ +HGY + G +VFVA +LV++YAK G + +AR +FD M +D+V W+ M
Sbjct: 773 SASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVM 832
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
++ Y EA+ +F R +P+ T+ LS + +E +F
Sbjct: 833 MKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTL-RTLSRVVKC--------KKNILELKQF 883
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKD-KDQVVWNAVVSGLSMNGYVKVAFGVFG 322
A A K+F D D +VWN +S G A F
Sbjct: 884 -------------------KAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFV 924
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
+ + +G TFV +L ++ G+Q + R L ++ C++++ ++
Sbjct: 925 DMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRS-GLDQVVSVGNCLINMYVKA 983
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
G + A + M E + I W +++GC L
Sbjct: 984 GSVSRARSVFGQMN-EVDLISWNTMISGCTL 1013
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 171/402 (42%), Gaps = 39/402 (9%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
+ +R T T V K C H VK GL D FV +L+N+Y
Sbjct: 747 LFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYA 806
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVR 136
G + +A +FD + ++VV W ++ Y++ EA+ +F G +PD ++
Sbjct: 807 KFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRT 866
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
+ ++ K Y AT L +Y G+ D
Sbjct: 867 LSRVVKCKKNILELKQFKAY------------ATKLF-MYDDDGS--------------D 899
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASS 256
++ W+ + + G EA+D F +M + + T V +L+ A L LELG
Sbjct: 900 VIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHG 959
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
+ R+ +G LI+MY K G +++A VF +M + D + WN ++SG +++G +
Sbjct: 960 IVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEEC 1019
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP--MIEHY-- 372
+ G+F L + + P+ T +L C+ EG + + ++ +++ +
Sbjct: 1020 SVGMFVHLLRDSLLPDQFTVASVLRACSSL----EGGYYLATQIHACAMKAGVVLDSFVS 1075
Query: 373 GCMVDLLGRSGQLDEAHELIKSMP----MEPNAIVWGALLAG 410
++D+ + G+++EA L + NAI+ G +++G
Sbjct: 1076 TALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSG 1117
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/608 (38%), Positives = 362/608 (59%), Gaps = 14/608 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I +V +C + A+E + +GF P +T ++ AC +LG++ HSL ++ G
Sbjct: 225 LISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMG 284
Query: 61 LDCDEFVKTSLLNLYVHCGY---LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
D V L+++Y + A KVF+ + +V+SWTA+ISGY+ G E +
Sbjct: 285 FASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVM 344
Query: 118 -MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F +L+ +KP+ + +L AC + D + + +H +V ++ + V +LV +Y
Sbjct: 345 VLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMY 404
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ G ME+ARRVF+Q+ E+ ++S + +G + LD + + R ++ T
Sbjct: 405 AESGCMEEARRVFNQLYERSMIS--CITEGRDA------PLD--HRIGRMDMGISSSTFA 454
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
++SA AS+G L G + + F S+ + +L+ MY++CG + AC+ F E+KD+
Sbjct: 455 SLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDR 514
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ + W +++SGL+ +GY + A +F + G++PN T++ +L C+H GLV EG+++F
Sbjct: 515 NVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYF 574
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
SM R L P +EHY CMVDLL RSG + EA E I MP++ +A+VW LL CR H
Sbjct: 575 RSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDN 634
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
++ E +I LEP + YVLLSN+Y+ + W++ A+IRS M D + K G SW+E
Sbjct: 635 IEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWME 694
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
V+ HEF GD SHP ++ IY KLD L ++K G+VP T VL D+ +E K+ +L H
Sbjct: 695 VENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQH 754
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEK+A+AFGLITT+ IRI KNLRVC DCH AIK +SK T REII+RD+NRFH +G
Sbjct: 755 SEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDG 814
Query: 597 SCSCKDFW 604
CSC ++W
Sbjct: 815 ECSCGEYW 822
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 180/361 (49%), Gaps = 13/361 (3%)
Query: 45 DFQLGVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-KNVVSWTAI 102
D +LG H +++ L D D V SLL LY CG +A A VFD + +++VSWTA+
Sbjct: 63 DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122
Query: 103 ISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC--TQLGDLSTAKWIHGYVNEA 160
S G E++ + +L GL P+++++ V AC +L L +
Sbjct: 123 ASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMG 182
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
G ++ V ++L+D+ A+ G++ AR+VFD + EK +V W+ +I Y +EA+++F
Sbjct: 183 LWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIF 242
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
+ + +P+ YTM ++SAC LG++ LG+ S R F S+ + L+DMYAK
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKS 302
Query: 281 G---RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV-FGQLEKCGIQPNGNTF 336
M A KVF M+ D + W A++SG +G + V FG++ I+PN T+
Sbjct: 303 NIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITY 362
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY--GCMVDLLGRSGQLDEAHELIKS 394
+L C + D GRQ + V H +V + SG ++EA +
Sbjct: 363 SSILKACANISDHDSGRQVH---AHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQ 419
Query: 395 M 395
+
Sbjct: 420 L 420
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/462 (47%), Positives = 315/462 (68%), Gaps = 1/462 (0%)
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+ D+ + IH V +G G ++V SL+ LYA CG++ A +VFD+MPEKD+V+W+S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I G+A NG P+EAL ++ M + +KP+ +T+V +LSACA +GAL LG +M +
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
N L+D+YA+CGR+ +A +F EM DK+ V W +++ GL++NG+ K A +F
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 324 LEKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
+E G+ P TFVG+L C+H G+V EG ++F M + + P IEH+GCMVDLL R+
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLS 442
GQ+ +A+E IKSMPM+PN ++W LL C +H +DLAE Q++ LEP +SG+YVLLS
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 443 NIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLD 502
N+Y++ +W+D KIR M G++K+ G S VEV VHEFL+GD SHP S+ IY+KL
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 360
Query: 503 ELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
E+ +L++ G+VP +V D+EEEEK+ + HSEK+A+AF LI+T + I + KNLR
Sbjct: 361 EMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLR 420
Query: 563 VCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
VC DCH AIKL+SK+ REI+VRD +RFH F GSCSC+D+W
Sbjct: 421 VCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 183/292 (62%), Gaps = 7/292 (2%)
Query: 45 DFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIIS 104
D +LG HS+++++G +V+ SLL+LY +CG +A A KVFD +P+K++V+W ++I+
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 105 GYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR 164
G+ G EEA+ ++ + +G+KPD F+IV +L+AC ++G L+ K +H Y+ + G R
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
N+ + L+DLYA+CG +E+A+ +FD+M +K+ VSW+S+I G A NGF KEA+++F M+
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 225 R-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCG 281
E L P T VG+L AC+ G ++ G M R E+ P + ++D+ A+ G
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGCMVDLLARAG 241
Query: 282 RMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
++ +A + + M + V+W ++ +++G +A F +++ ++PN
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPN 291
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 5/235 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF N + A+ Y M ++G P FT +L ACA+ LG R H ++K G
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + LL+LY CG + +A +FD++ DKN VSWT++I G G +EAI +F+
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 121 RLLH-RGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ GL P + V +L AC+ G + ++ E + +VDL A+
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
G ++KA MP + ++V W +++ +G L F +Q L+P +
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPNH 292
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/504 (44%), Positives = 325/504 (64%)
Query: 101 AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
++I Y + ++ ++ ++ G+ PDS + VL + QL K IH + +
Sbjct: 112 SMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQM 171
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
G NV+V+T+LV++Y C ++ AR+VFD++P+++IVSW+++I GY N ++ +D+F
Sbjct: 172 GFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVF 231
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
MQ KP TMVGVL ACA LGAL G W +++ N N +GT LIDMYAKC
Sbjct: 232 REMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKC 291
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G + +A K+F+ M+ K+ WN ++SG +MNG + A F ++ +P+ TF+G+L
Sbjct: 292 GVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVL 351
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C C H GLV+EGR +F SM F L P IEHYGCMVDLLGR+G LDEA +LI++M M+P+
Sbjct: 352 CACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPD 411
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSM 460
I+W LL CR+H L E + +L+ LEP N NYVLL+N+Y+ +W+ ++R M
Sbjct: 412 PIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREM 471
Query: 461 MGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHV 520
M + ++K+ GCS +E+D VV+EF+V + P E++Y L ++ KLK AG+V T
Sbjct: 472 MDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMA 531
Query: 521 LFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGR 580
+DIEEEEK++ L HSEKLALAFGL+ + +RI KNLR+C DCH K++SK+ R
Sbjct: 532 SYDIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRR 591
Query: 581 EIIVRDNNRFHCFIEGSCSCKDFW 604
+I VRD NRFH F+ G+CSCKD+W
Sbjct: 592 DISVRDRNRFHHFVGGACSCKDYW 615
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 193/343 (56%), Gaps = 7/343 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR + ++ H++ Y M G P + TFP VLK+ A+ +LG H I++ G
Sbjct: 113 MIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMG 172
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + +V T+L+N+Y C ++DA +VFD+IPD+N+VSW A+I+GY + + I++FR
Sbjct: 173 FESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFR 232
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G KP ++V VL AC LG L+ +WI Y++ NVFV T+L+D+YAKCG
Sbjct: 233 EMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCG 292
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++A ++F M K++ +W+ +I GYA NG + AL F M E KP+ T +GVL
Sbjct: 293 VVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLC 352
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKD 297
AC G + G + M + EF P + ++D+ + G + +A ++ + M D
Sbjct: 353 ACCHQGLVNEGRTYFTSM-KEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPD 411
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGL 339
++W ++ ++G +++ G F + ++P NG +V L
Sbjct: 412 PIIWRELLGACRIHGNIQL--GEFAIKKLLELEPNNGENYVLL 452
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 126/256 (49%), Gaps = 15/256 (5%)
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+SMI+ Y + ++ ++ M + + P+ T VL + A L ELG + +
Sbjct: 111 NSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQ 170
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
F SN + T L++MY C ++ A +VF E+ D++ V WNA+++G + N + V
Sbjct: 171 MGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDV 230
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR------VFSLTPMIEHYGC 374
F +++ G +P T VG+L C H G +++GR + + VF T +I
Sbjct: 231 FREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALI----- 285
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWN 434
D+ + G +DEA ++ K+M ++ N W L++G ++ + + A +++I +E +
Sbjct: 286 --DMYAKCGVVDEAEKIFKAMRVK-NVYTWNVLISGYAMNGRGESALQAFSRMI-MEKFK 341
Query: 435 SGNYVLLSNIYSASHK 450
L + + H+
Sbjct: 342 PDEVTFLGVLCACCHQ 357
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/609 (38%), Positives = 351/609 (57%), Gaps = 38/609 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR +V+N + ++ + +M P ++TFP VLKAC+ +G + H K G
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L FV L+++Y CG+L++A V D++ ++VVSW +++ GY ++A+ + R
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + D+ ++ +L A +
Sbjct: 231 EMESVKISHDAGTMASLLPAVSN---------------------------------TTTE 257
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ + +F +M +K +VSW+ MI Y N P EA++++ M+ + +P+ ++ VL
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC AL LG ++ER + + N +L LIDMYAKCG + +A VF MK +D V
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++S +G A +F +L+ G+ P+ FV L C+HAGL++EGR F M+
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ +TP +EH CMVDLLGR+G++ EA+ I+ M MEPN VWGALL CR+H TD+
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIG 497
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
++L L P SG YVLLSNIY+ + +W + IR++M KG++K G S VEV+ +
Sbjct: 498 LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRI 557
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H FLVGD SHP S++IY +LD L K+K G+VP ++ L D+EEE+K+ LA HSEKL
Sbjct: 558 IHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKL 617
Query: 541 ALAFGLITTAPKD-----VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
A+ F L+ T ++ IRI KNLR+CGDCH A KLIS+IT REII+RD NRFH F
Sbjct: 618 AIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRF 677
Query: 596 GSCSCKDFW 604
G CSC D+W
Sbjct: 678 GVCSCGDYW 686
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 6/269 (2%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D+ T + +H + N + L+ YA ++ AR+VFD++PE++++ + MI+
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
Y +NGF E + +F M N++P++YT VL AC+ G + +G + S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+G L+ MY KCG +++A V EM +D V WN++V G + N A V ++E
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
I + T LL ++ E + M ++ + M+ + ++
Sbjct: 234 SVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS-WNVMIGVYMKNAMP 290
Query: 386 DEAHELIKSMP---MEPNAIVWGALLAGC 411
EA EL M EP+A+ ++L C
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPAC 319
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/605 (38%), Positives = 352/605 (58%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + + +I + MR G P++FTF VLKA HDF LG + H+L V G
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG 280
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V +L+ Y + + +FD++P+ + VS+ +IS Y E +++ FR
Sbjct: 281 FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G +F +L+ L L + +H A + V SLVD+YAKC
Sbjct: 341 EMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCE 400
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
E+A +F +P++ VSW+++I GY G L +F M+ NL+ + T VL
Sbjct: 401 MFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLK 460
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A AS +L LG +F+ R+ L N G+ L+DMYAKCG + A +VF EM D++ V
Sbjct: 461 ASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++S + NG + A G F ++ + G+QP+ + +G+L C+H G V++G ++F +MS
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS 580
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++ +TP +HY CM+DLLGR+G+ EA +L+ MP EP+ I+W ++L CR+HK LA
Sbjct: 581 PIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLA 640
Query: 421 EHVLNQLIALEPW-NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E +L ++E ++ YV +SNIY+A+ +W ++ M ++GI+K+ SWVEV+
Sbjct: 641 ERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNH 700
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F D +HP ++I K++EL +++ G+ P T V+ D++E+ K L HSE+
Sbjct: 701 KIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSER 760
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AF LI+T I + KNLR C DCH AIKLISKI REI VRD +RFH F EG CS
Sbjct: 761 LAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCS 820
Query: 600 CKDFW 604
C D+W
Sbjct: 821 CGDYW 825
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 197/412 (47%), Gaps = 10/412 (2%)
Query: 5 FVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLD 62
+ N F A + + M + LP + TF +L C + H+ VK G D
Sbjct: 120 YARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179
Query: 63 CDEFVKTS--LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ F+ S LL Y L A +F++IP+K+ V++ +I+GY +G E+I++F
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G +P F+ VL A L D + + +H G R+ V ++D Y+K
Sbjct: 240 KMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHD 299
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + R +FD+MPE D VS++ +I Y+ + +L F MQ + +LS
Sbjct: 300 RVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLS 359
Query: 241 ACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
A+L +L++G + + + + + + +G +L+DMYAKC +A +F+ + +
Sbjct: 360 IAANLSSLQMGRQLHCQALLATADSILH--VGNSLVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W A++SG G +F ++ ++ + +TF +L + G+Q
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF 477
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ R +L + G +VD+ + G + +A ++ + MP + NA+ W AL++
Sbjct: 478 IIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 164/346 (47%), Gaps = 8/346 (2%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG--L 127
++++ +V G ++ A +FD +PD+ VV+WT ++ Y + +EA +FR++
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCT 143
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS--LVDLYAKCGNMEKA 185
PD + +L C + +H + + G N F+ S L+ Y + ++ A
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+F+++PEKD V+++++I GY +G E++ +F M++ +P +T GVL A L
Sbjct: 204 CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGL 263
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
LG + F + +G ++D Y+K R+ + +F EM + D V +N V+
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
S S + + F +++ G F +L + + GRQ + +
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLAT 381
Query: 366 TPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
I H G +VD+ + +EA + KS+P + + W AL++G
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISG 426
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 8/224 (3%)
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R++ G D+ ++ + G +S A+ ++ + +N +++ + K G
Sbjct: 38 RIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPH----KNTVSTNTMISGHVKTG 93
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN--LKPEYYTMVGV 238
++ AR +FD MP++ +V+W+ ++ YA N EA +F M R + P++ T +
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTT--LIDMYAKCGRMAQACKVFREMKDK 296
L C +F + F +NP L + L+ Y + R+ AC +F E+ +K
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
D V +N +++G +G + +F ++ + G QP+ TF G+L
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/583 (41%), Positives = 352/583 (60%), Gaps = 6/583 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT TF ++ +CA+++ G+ H +V +G D D F+ T L+N+Y G + A KV
Sbjct: 76 PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT----Q 143
FD+ ++ + W A+ G +E ++++ ++ G+ D F+ VL AC
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+ L K IH ++ G N+ V T+L+D+YAK G++ A VF MP K+ VSWS+M
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255
Query: 204 IQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
I +A N P +AL++F M E + P TMV VL ACA L ALE G ++ R
Sbjct: 256 IACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRR 315
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
S + LI MY +CG + +VF MK++D V WN+++S M+G+ K A +F
Sbjct: 316 GLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIF 375
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
+ G P+ +F+ +L C+HAGLV+EG+ F SM + + P +EHY CMVDLLGR
Sbjct: 376 ENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 435
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+ +LDEA +LI+ M EP VWG+LL CR+H +LAE L LEP N+GNYVLL
Sbjct: 436 ANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLL 495
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
++IY+ + W++A + ++ +G+QK+ GCSW+EV V+ F+ D +P E+I++ L
Sbjct: 496 ADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALL 555
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+L+ ++KA G+VP T+ VL+D++EEEK+ + HSEKLA+AFGLI T + IRI KNL
Sbjct: 556 VKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNL 615
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH K ISK REI+VRD NRFH F +G CSC D+W
Sbjct: 616 RLCEDCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 166/326 (50%), Gaps = 10/326 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREH----DFQLGVRSHSLI 56
+ R C + ++ Y M G FT+ FVLKAC Q G H+ I
Sbjct: 150 LFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHI 209
Query: 57 VKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
++ G + + V T+LL++Y G ++ A VF +P KN VSW+A+I+ + +A+
Sbjct: 210 LRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKAL 269
Query: 117 NMFRRLL---HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLV 173
+F+ ++ H + P+S ++V VL AC L L K IHGY+ G + V +L+
Sbjct: 270 ELFQLMMLEAHDSV-PNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALI 328
Query: 174 DLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
+Y +CG + +RVFD M +D+VSW+S+I Y +GF K+A+ +F NM + P Y
Sbjct: 329 TMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYI 388
Query: 234 TMVGVLSACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+ + VL AC+ G +E G + S + + ++D+ + R+ +A K+ +
Sbjct: 389 SFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIED 448
Query: 293 MK-DKDQVVWNAVVSGLSMNGYVKVA 317
M + VW +++ ++ V++A
Sbjct: 449 MHFEPGPTVWGSLLGSCRIHCNVELA 474
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/537 (44%), Positives = 332/537 (61%), Gaps = 17/537 (3%)
Query: 85 LKVFDDIPDKN-VVSWTAIISGYINEGNLEEAINMFRR---------------LLHR-GL 127
+K+ DD +N S I S Y N ++ +M R L+H+ +
Sbjct: 26 MKLIDDSVSRNGFESIARIFSKYRGSINSQQCNSMIRTYLDLNKHLNSLYIFALMHKFSI 85
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
PDS + VL A QL D K IHG V + G +V+ +T+LV LY C ++ A +
Sbjct: 86 LPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQ 145
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
+FD+MPE++ V+W+++I GY N +A+D F M + +P T+V VLSAC+ LGA
Sbjct: 146 LFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGA 205
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
G W F+ N N +GT LIDMYAKCG + + KVF E+++K+ WN ++SG
Sbjct: 206 FNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISG 265
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
+MNG A F ++ +P+ TF+G+LC C H GLV EGR F SM + F L P
Sbjct: 266 YAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQP 325
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
IEHYGCMVDLLGR+G L+EA ELI+SM +EP+ I+W ALL CR+H T L E+++ +L
Sbjct: 326 RIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRL 385
Query: 428 IALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVG 487
I LEP N NYVLLSNIYS +W + K+R MM +GI+K+ GCS +E++ VV+EF+
Sbjct: 386 IELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSSIEINNVVYEFVAS 445
Query: 488 DNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLI 547
++ P E IY +LD L KLK G+V TD L+DIE+EEK++ + HSEKLALAFGL+
Sbjct: 446 NDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVMYHSEKLALAFGLL 505
Query: 548 TTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ +RI KNLR+C DCHE K++S + R I+VRD NRFH F EG CSC+D+W
Sbjct: 506 NSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 198/344 (57%), Gaps = 9/344 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR ++ + +++ + M LP + TFP VLKA A+ D +G H ++++ G
Sbjct: 60 MIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMG 119
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
CD + T+L++LY C ++DA ++FD++P++N V+W A+I+GY + +AI+ FR
Sbjct: 120 FICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFR 179
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G +P ++V VL+AC+ LG + KWIH ++ NVFV T+L+D+YAKCG
Sbjct: 180 GMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCG 239
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + +VF+++ EK++ +W+ +I GYA NG AL F M EN KP+ T +GVL
Sbjct: 240 AVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLC 299
Query: 241 ACASLGALELGVWASSFME-RNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DK 296
AC G + G W FM + +F P + ++D+ + G + +A ++ + M +
Sbjct: 300 ACCHQGLVTEGRW--QFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEP 357
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGL 339
D ++W A++ ++G K+ + +L + ++P NG +V L
Sbjct: 358 DPIIWRALLCACRVHGNTKLGEYIIKRLIE--LEPNNGENYVLL 399
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/537 (44%), Positives = 332/537 (61%), Gaps = 17/537 (3%)
Query: 85 LKVFDDIPDKN-VVSWTAIISGYINEGNLEEAINMFRR---------------LLHR-GL 127
+K+ DD +N S I S Y N ++ +M R L+H+ +
Sbjct: 26 MKLIDDSVSRNGFESIARIFSKYRGSINSQQCNSMIRTYLDLNKHLNSLYIFALMHKFSI 85
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
PDS + VL A QL D K IHG V + G +V+ +T+LV LY C ++ A +
Sbjct: 86 LPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQ 145
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
+FD+MPE++ V+W+++I GY N +A+D F M + +P T+V VLSAC+ LGA
Sbjct: 146 LFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGA 205
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
G W F+ N N +GT LIDMYAKCG + + KVF E+++K+ WN ++SG
Sbjct: 206 FNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISG 265
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
+MNG A F ++ +P+ TF+G+LC C H GLV EGR F SM + F L P
Sbjct: 266 YAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQP 325
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
IEHYGCMVDLLGR+G L+EA ELI+SM +EP+ I+W ALL CR+H T L E+++ +L
Sbjct: 326 RIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRL 385
Query: 428 IALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVG 487
I LEP N NYVLLSNIYS +W + K+R MM +GI+K+ GCS +E++ VV+EF+
Sbjct: 386 IELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSSIEINNVVYEFVAS 445
Query: 488 DNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLI 547
++ P E IY +LD L KLK G+V TD L+DIE+EEK++ + HSEKLALAFGL+
Sbjct: 446 NDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVMYHSEKLALAFGLL 505
Query: 548 TTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ +RI KNLR+C DCHE K++S + R I+VRD NRFH F EG CSC+D+W
Sbjct: 506 NSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 198/344 (57%), Gaps = 9/344 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR ++ + +++ + M LP + TFP VLKA A+ D +G H ++++ G
Sbjct: 60 MIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMG 119
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
CD + T+L++LY C ++DA ++FD++P++N V+W A+I+GY + +AI+ FR
Sbjct: 120 FICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFR 179
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G +P ++V VL+AC+ LG + KWIH ++ NVFV T+L+D+YAKCG
Sbjct: 180 GMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCG 239
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + +VF+++ EK++ +W+ +I GYA NG AL F M EN KP+ T +GVL
Sbjct: 240 AVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLC 299
Query: 241 ACASLGALELGVWASSFME-RNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DK 296
AC G + G W FM + +F P + ++D+ + G + +A ++ + M +
Sbjct: 300 ACCHQGLVTEGRW--QFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEP 357
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGL 339
D ++W A++ ++G K+ + +L + ++P NG +V L
Sbjct: 358 DPIIWRALLCACRVHGNTKLGEYIIKRLIE--LEPNNGENYVLL 399
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/606 (39%), Positives = 357/606 (58%), Gaps = 6/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G N+C A++ ++ R T T+ V+K CA L + HS ++K G
Sbjct: 273 LMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHG 332
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD-DIPDKNVVSWTAIISGYINEGNLEEAINMF 119
V T+L + Y CG LADAL +F +NVVSWTAIISG I G++ A+ +F
Sbjct: 333 FHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLF 392
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ + P+ F+ +L A + IH V + FV T+L+ Y+K
Sbjct: 393 SRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKF 448
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+ E A +F + +KD+V+WS+M+ +A G + A +F M + +KP +T+ V+
Sbjct: 449 GSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVI 508
Query: 240 SACASLGA-LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
ACA A ++ G + + + + + L+ MY++ G + A VF D+D
Sbjct: 509 DACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDL 568
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WN+++SG + +GY A F Q+E GIQ +G TF+ ++ GCTH GLV EG+Q+F+S
Sbjct: 569 VSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDS 628
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M R + P +EHY CMVDL R+G+LDE LI+ MP A+VW LL CR+HK +
Sbjct: 629 MVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVE 688
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L + ++L++LEP +S YVLLSNIY+A+ KW + ++R +M + ++K GCSW+++
Sbjct: 689 LGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIK 748
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F+ D SHP+S++IY KL + T+LK G+ P T VL DI E++K+ L HSE
Sbjct: 749 NKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSE 808
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LALAFGLI T P ++I KNLRVCGDCH +K++S I REII+RD +RFH F G+C
Sbjct: 809 RLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGAC 868
Query: 599 SCKDFW 604
SC DFW
Sbjct: 869 SCGDFW 874
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 205/428 (47%), Gaps = 31/428 (7%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEF-VKTSLLN 73
++ ++ R G L + T VLKAC D LG + H L VK G D E TSL++
Sbjct: 84 LDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVD 143
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y+ CG + + ++VF+ +P KNVV+WT++++G + E + +F R+ G+ P+ F+
Sbjct: 144 MYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFT 203
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
VL+A G L + +H + G +VFV SL+++YAKCG +E A+ VF+ M
Sbjct: 204 FASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWME 263
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
+D+VSW++++ G N EAL +F+ + K T V+ CA+L L L
Sbjct: 264 TRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQ 323
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV-WNAVVSGLSMNG 312
S + ++ F + T L D Y+KCG +A A +F VV W A++SG NG
Sbjct: 324 LHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNG 383
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC-------THAGLVDEGRQF---------- 355
+ +A +F ++ + + PN T+ +L HA ++ Q
Sbjct: 384 DIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPFVGTALLA 443
Query: 356 ----FNSMSRVFSLTPMIEH-----YGCMVDLLGRSGQLDEAHELIKSMPME---PNAIV 403
F S S+ MIE + M+ ++G + A L M ++ PN
Sbjct: 444 SYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFT 503
Query: 404 WGALLAGC 411
+++ C
Sbjct: 504 ISSVIDAC 511
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 206/419 (49%), Gaps = 12/419 (2%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
+ + MR EG P FTF VL A A + LG R H+ VK G FV SL+N+
Sbjct: 186 MALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNM 245
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGY-INEGNLEEAINMFRRLLHRGLKPDSFS 133
Y CG + DA VF+ + +++VSW +++G +NE L EA+ +F K +
Sbjct: 246 YAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECEL-EALQLFHESRATMGKMTQST 304
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
V+ C L L+ A+ +H V + G V T+L D Y+KCG + A +F
Sbjct: 305 YATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTT 364
Query: 194 -EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
+++VSW+++I G NG A+ +F M+ + + P +T +L ASL L +
Sbjct: 365 GSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLK--ASLSILPPQI 422
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
A + + P +GT L+ Y+K G A +F+ ++ KD V W+A++S + G
Sbjct: 423 HAQVI--KTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAG 480
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLL--CGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+ A +F ++ GI+PN T ++ C C AG VD+GRQ F+++S + I
Sbjct: 481 DCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAG-VDQGRQ-FHAISIKYRYHDAIC 538
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+V + R G +D A +++ + + + W ++++G H + A Q+ A
Sbjct: 539 VSSALVSMYSRKGNIDSA-QIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEA 596
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 12/237 (5%)
Query: 185 ARRVFDQMPEKDI-VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
AR D++P +D V + ++ YA G E LD F +R + + T+ VL AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 244 SLGALELG-----VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
S+ LG + +R E + GT+L+DMY KCG + + +VF M K+
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSA----GTSLVDMYMKCGSVCEGIEVFEGMPKKNV 166
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W ++++G + +F ++ GI PN TF +L G +D G Q ++
Sbjct: 167 VTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG-QRVHA 225
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
S F + ++++ + G +++A + M + + W L+AG +L++
Sbjct: 226 QSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLMAGLQLNE 281
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/609 (38%), Positives = 360/609 (59%), Gaps = 8/609 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN---EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIV 57
+I G+ N + A++ Y M + EG P TF L AC D G + V
Sbjct: 131 LIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTV 190
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
+G D V+ +L+N+Y CG L A KVFD + +++V++W +ISGY +G +A+
Sbjct: 191 ASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALE 250
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+F+R+ KP+ + + +LTACT L DL + IH V E G ++ + L+++Y
Sbjct: 251 LFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYT 310
Query: 178 KCGN-MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
KC + +E+AR+VF++M +D+++W+ +I Y G K+ALD+F MQ EN+ P T+
Sbjct: 311 KCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLS 370
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VLSACA LGA G + + ++ VL +L++MY +CG + VF ++DK
Sbjct: 371 NVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDK 430
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
V W+ +++ + +G+ + F +L + G+ + T V L C+H G++ EG Q F
Sbjct: 431 SLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTF 490
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
SM L P H+ CMVDLL R+G+L+ A LI MP P+A+ W +LL+GC+LH
Sbjct: 491 LSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHND 550
Query: 417 TDLAEHVLNQLIALEPWNSGNYV-LLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
T A V ++L LE + + V LLSN+Y+ + +W+D K R+ + +K GCS++
Sbjct: 551 TKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNR---RAARKNPGCSYI 607
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
E++ VHEF+ GD SHP E I +++ L+ ++K AG+VP VL +++EEEK+ L
Sbjct: 608 EINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCY 667
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+A+GLI+T P + I KNLR C DCH A K IS+I GR+I+VRD+ RFH F
Sbjct: 668 HSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFEN 727
Query: 596 GSCSCKDFW 604
GSCSCKD+W
Sbjct: 728 GSCSCKDYW 736
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 243/476 (51%), Gaps = 15/476 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ F N ++ A+ +Y M EG P F + C+ D + G H++I++
Sbjct: 29 IVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETR 88
Query: 61 L-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L + D + T+L+ +Y C L A K FD++ K +V+W A+I+GY G+ A+ ++
Sbjct: 89 LLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIY 148
Query: 120 RRLLHR---GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+ ++ + G+KPD+ + L ACT +GD+S + I +G + V +L+++Y
Sbjct: 149 QDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMY 208
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+KCG++E AR+VFD++ +D+++W++MI GYA G +AL++F M + KP T +
Sbjct: 209 SKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFI 268
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC-GRMAQACKVFREMKD 295
G+L+AC +L LE G + + + S+ V+G L++MY KC + +A +VF M+
Sbjct: 269 GLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRT 328
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+D + WN ++ G K A +F Q++ + PN T +L C G +G+
Sbjct: 329 RDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAV 388
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL-- 413
++ ++ M ++ R G LD+ + ++ + + + W L+A
Sbjct: 389 HALIASGRCKADVVLENSLM-NMYNRCGSLDDTVGVFAAI-RDKSLVSWSTLIAAYAQHG 446
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIR---SMMGDKGI 466
H +T L EH L E + + ++S + + SH ++ SM+GD G+
Sbjct: 447 HSRTGL-EHFWELL--QEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGL 499
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 197/378 (52%), Gaps = 7/378 (1%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG +ADAL VF I N VSWT I++ + G+ EA+ +RR++ GL+PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGR-NVFVATSLVDLYAKCGNMEKARRVFDQM 192
V + C+ DL + +H + E ++ + T+L+ +YA+C ++E AR+ FD+M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNM---QRENLKPEYYTMVGVLSACASLGALE 249
+K +V+W+++I GY+ NG + AL ++ +M E +KP+ T L AC +G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + + + S+ ++ LI+MY+KCG + A KVF +K++D + WN ++SG +
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
G A +F ++ +PN TF+GLL CT+ +++GR + + ++
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+ S L+EA ++ + M + I W L+ + + A + Q+
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTR-DVITWNILIVAYVQYGQAKDALDIFKQM-Q 358
Query: 430 LEPWNSGNYVLLSNIYSA 447
LE + N + LSN+ SA
Sbjct: 359 LENV-APNEITLSNVLSA 375
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/500 (45%), Positives = 319/500 (63%), Gaps = 2/500 (0%)
Query: 107 INEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNV 166
+ G + + + +L + P S +L +C G+ + H + + G ++
Sbjct: 6 LESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDM 65
Query: 167 FVATSLVDLYAKCGNMEKARRVFDQMPEKDI--VSWSSMIQGYASNGFPKEALDMFYNMQ 224
+ T L+D YAK G +E+AR +FD M E++ V+W++MI Y G A+ MF MQ
Sbjct: 66 ILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQ 125
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
EN+KP TMV +LSACA LGAL++G W ++ + VLG LIDMY KCG +
Sbjct: 126 SENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALE 185
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A VF + K+ WN+++ GL MNG + A F +EK GI+P+G TFVG+L GC+
Sbjct: 186 AAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCS 245
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
H+GL+ G+++F+ M V+ L P +EHYGCMVDLLGR+G L EA ELI++MPM+PN++V
Sbjct: 246 HSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVL 305
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
G+LL C++HK T L E V QL+ L+P + GNYV LSN+Y++ +W+D R +M +
Sbjct: 306 GSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKR 365
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
G+ K GCS +EV+ +VHEF+ GD SHP +I + LDE+A +LK G VP T +VL DI
Sbjct: 366 GVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDI 425
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
EEEEK+ + HSE++A+AFGL++T P IR+ KNLR C DCH A+KLIS REIIV
Sbjct: 426 EEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIV 485
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD RFH F GSCSC D+W
Sbjct: 486 RDRKRFHHFRNGSCSCNDYW 505
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 174/328 (53%), Gaps = 4/328 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR + + + FY+ M LP+ +F +L++CA + QLG H I+K G
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV--VSWTAIISGYINEGNLEEAINM 118
+ D ++T LL+ Y GY+ +A +FD++ ++N V+W +IS Y+ G AI+M
Sbjct: 61 FEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISM 120
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F+++ +KP ++V +L+AC LG L +WIHGY+ +V + +L+D+Y K
Sbjct: 121 FQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCK 180
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG +E A VF + K+I W+S+I G NG +EA+ F M++E +KP+ T VG+
Sbjct: 181 CGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGI 240
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMKDK- 296
LS C+ G L G S M L V ++D+ + G + +A ++ R M K
Sbjct: 241 LSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP 300
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ +V +++ ++ K+ V QL
Sbjct: 301 NSMVLGSLLRACQIHKDTKLGEQVTQQL 328
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/605 (37%), Positives = 372/605 (61%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHD-FQLGVRSHSLIVKA 59
MI + + ++ + + +EG P +FT VL+AC+ D + + H +K
Sbjct: 976 MISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKT 1035
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D FV T+L+++Y G + +A +F + D ++ W A++ GYI + ++A+ +F
Sbjct: 1036 GNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELF 1095
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G K D ++ AC L L K IH + +AG ++ V + ++D+Y KC
Sbjct: 1096 SLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKC 1155
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+M A VF+ + D V+W+SMI G NG +AL +++ M++ + P+ YT ++
Sbjct: 1156 GDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLI 1215
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A + + ALE G + + + + +S+P +GT+L+DMYAKCG + A ++F++M ++
Sbjct: 1216 KASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIA 1275
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+WNA++ GL+ +G + A +F ++ GI+P+ +F+G+L C+HAGL E ++ +SM
Sbjct: 1276 LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSM 1335
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + P IEHY C+VD LGR+G + EA ++I++MP + +A + ALL CR+ +
Sbjct: 1336 PNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVET 1395
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ V +L ALEP++S YVLLSNIY+A+++W+D R MM K ++K G SW++V
Sbjct: 1396 GKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKN 1455
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
++H F+V D SHP ++ IY K++E+ ++ G+VP T+ VL D+E+EEK+ L HSEK
Sbjct: 1456 MLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEK 1515
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GLI+T IR+ KNLRVCGDCH AIK ISK+ REI++RD NRFH F +G CS
Sbjct: 1516 LAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCS 1575
Query: 600 CKDFW 604
C D+W
Sbjct: 1576 CGDYW 1580
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 233/458 (50%), Gaps = 7/458 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
AIE + +M T VL A A D +LG + H + VK+GLD D V SL+N
Sbjct: 888 AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVN 947
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y G A +VF+D+ +++SW ++IS EE++N+F LLH GLKPD F+
Sbjct: 948 MYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFT 1007
Query: 134 IVRVLTACTQLGD-LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ VL AC+ L D L+ ++ IH + + G + FVAT+L+D+Y+K G ME+A +F
Sbjct: 1008 LASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNK 1067
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
+ D+ W++M+ GY K+AL++F + + K + T+ AC L L+ G
Sbjct: 1068 DDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGK 1127
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ + F S+ + + ++DMY KCG M A VF + D V W +++SG NG
Sbjct: 1128 QIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNG 1187
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT-PMIEH 371
A ++ ++ + + P+ TF L+ + +++GRQ ++ ++ ++ P +
Sbjct: 1188 NEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG- 1246
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA-- 429
+VD+ + G +++A+ L K M + N +W A+L G H + A ++ + +
Sbjct: 1247 -TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHG 1304
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
+EP +LS A + SM D GI+
Sbjct: 1305 IEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIE 1342
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 126/223 (56%), Gaps = 6/223 (2%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+ H+ LG +H+ IV +G D F+ +LL +Y CG L+ A +VFD P+++
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 96 VVSWTAIISGYI-----NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+V+W AI+ Y N+GN +E +++FR L ++ VL C G L A
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ +HGY + G +VFV+ +LV++Y+KCG M AR +FD M E+D+V W+ M++GY
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
G KEA +F R L+P+ +++ +L+ + + E G W
Sbjct: 807 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDE-GKW 848
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 202/424 (47%), Gaps = 21/424 (4%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
++ MR + N ++ + FQL H ++GL DEF +LN
Sbjct: 784 LFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFH----RSGLRPDEFSVQLILNGVS 839
Query: 77 HCGY-----LADALKVF-------DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
+ LAD ++ + DD PD V W +S + G+ AI F +
Sbjct: 840 EVNWDEGKWLADQVQAYAAKLSLSDDNPD--VFCWNKKLSECLWAGDNWGAIECFVNMNG 897
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
+ D+ +++ VL A DL K +HG ++G +V VA SLV++Y+K G
Sbjct: 898 LNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYF 957
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
AR VF+ M D++SW+SMI A + +E++++F ++ E LKP+++T+ VL AC+S
Sbjct: 958 AREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSS 1017
Query: 245 L-GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
L L + + +++ + TTLID+Y+K G+M +A +F+ D D WNA
Sbjct: 1018 LIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNA 1077
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
++ G + K A +F + K G + + T C L+D+G+Q +
Sbjct: 1078 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 1137
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ + + G ++D+ + G + A ++ + P+ + W ++++GC + D A +
Sbjct: 1138 FDSDLHVNSG-ILDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNGNEDQALRI 1195
Query: 424 LNQL 427
+++
Sbjct: 1196 YHRM 1199
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 181/408 (44%), Gaps = 44/408 (10%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
Q + + +R T T VLK C H +K GL+ D FV +L
Sbjct: 709 QEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGAL 768
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+N+Y CG + DA +FD + +++VV W ++ GY+ G +EA +F GL+PD
Sbjct: 769 VNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDE 828
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
FS+ +L +++ + KW+ V YA ++ D
Sbjct: 829 FSVQLILNGVSEV-NWDEGKWL----------------ADQVQAYAAKLSLS------DD 865
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
P D+ W+ + G A++ F NM N+ + T++ VL+A A LELG
Sbjct: 866 NP--DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELG 923
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
++ S+ + +L++MY+K G A +VF +MK D + WN+++S + +
Sbjct: 924 KQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQS 983
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE---GRQFF------NSMSRV 362
+ + +F L G++P+ T +L C+ L+D RQ +++
Sbjct: 984 SLEEESVNLFIDLLHEGLKPDHFTLASVLRACS--SLIDGLNISRQIHVHALKTGNIADS 1041
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F T +I D+ +SG+++EA L ++ + + W A++ G
Sbjct: 1042 FVATTLI-------DVYSKSGKMEEAEFLFQNKD-DLDLACWNAMMFG 1081
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/605 (39%), Positives = 355/605 (58%), Gaps = 5/605 (0%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
+R FQ A+ Y M G P FTFPF K+CA G + H ++K G
Sbjct: 28 LRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGC 87
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN--VVSWTAIISGYINEGNLEEAINMF 119
+ + FV+TSL+++Y C +A A KVFD+ V + A+I+GY +A+ +F
Sbjct: 88 EPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLF 147
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R++ G+ ++ +++ ++ C L +H G ++ V L+ +Y +C
Sbjct: 148 RQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRC 207
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+++ AR++FD MPEK +++W++MI GYA NG LD++ M+ + P+ T+VGVL
Sbjct: 208 GSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVL 267
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
S+CA LGA G +E + F NP L LI+MYA+CG + +A +F M +K+ +
Sbjct: 268 SSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVI 327
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W A+++G M+G ++A +F ++ P+G FV +L C+HAGL ++G +F +M
Sbjct: 328 SWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAM 387
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R + L P EHY C+VDLLGR+G+L+EA +LI SM +EP+ VWGALL C++H+ +L
Sbjct: 388 ERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVEL 447
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE ++I EP N G YVLLSNI+S + ++R MM ++ ++K GCS+VE G
Sbjct: 448 AELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQG 507
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H FL GD +HP +++IY LD L +K G D + EE + HSEK
Sbjct: 508 RIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDNDQ---ESRNEELITGMGVHSEK 564
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI T P I + KNLRVCGDCH +KL+S+I R+++VRD RFH F G CS
Sbjct: 565 LAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGVCS 624
Query: 600 CKDFW 604
CKD+W
Sbjct: 625 CKDYW 629
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 176/319 (55%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N F A+ + MR EG T ++ CA G H+ V+ G
Sbjct: 130 LIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFG 189
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D V LL +YV CG + A K+FD +P+K +++W A+ISGY G ++++R
Sbjct: 190 LDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYR 249
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ PD ++V VL++C LG + + + + +G G N F+ +L+++YA+CG
Sbjct: 250 KMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCG 309
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ KAR +FD M EK+++SW+++I GY +G + A+ +F M + P+ V VLS
Sbjct: 310 NLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLS 369
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G E G++ + MER+ L P + ++D+ + GR+ +A K+ M + D
Sbjct: 370 ACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDG 429
Query: 299 VVWNAVVSGLSMNGYVKVA 317
VW A++ ++ V++A
Sbjct: 430 AVWGALLGACKIHRNVELA 448
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 177/358 (49%), Gaps = 7/358 (1%)
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
SW A + + + +EA+N++ ++L G P++F+ +C L +H
Sbjct: 20 TTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLH 79
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ--MPEKDIVSWSSMIQGYASNGF 212
G+V + G FV TSL+ +Y KC + AR+VFD+ V ++++I GY+ N
Sbjct: 80 GHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSR 139
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+A+ +F M++E + TM+G++ CA L G + R + +G
Sbjct: 140 FSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNC 199
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+ MY +CG + A K+F M +K + WNA++SG + NG ++ ++E GI P+
Sbjct: 200 LLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPD 259
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMS-RVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
T VG+L C H G GR+ + F P +++ ++++ R G L +A +
Sbjct: 260 PVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKARAI 317
Query: 392 IKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
M E N I W A++AG +H + +LA + +++I+ + G +S + + SH
Sbjct: 318 FDGM-TEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGA-AFVSVLSACSH 373
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/606 (39%), Positives = 360/606 (59%), Gaps = 4/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ +V N + AI+F+ M GF P + + A G H+ +K
Sbjct: 338 MLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQR 397
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D V +L+++Y+ CG + + KVF+ + ++ +SWT I++ + EA+ M
Sbjct: 398 LHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMIL 457
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L G+ DS I +L C L +S K +H Y G ++ + L+D+Y +CG
Sbjct: 458 ELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGECG 516
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + +F ++ +KDIVSW+SMI +NG A+ +F MQ+ N++P+ +V +L
Sbjct: 517 EFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILV 576
Query: 241 ACASLGALELGVWASSFMERNEF-LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A A L +L G F+ R F + PV+ ++L+DMY+ CG M A +VF K KD V
Sbjct: 577 AIAGLSSLTKGKQVHGFLIRRNFPIEGPVV-SSLVDMYSGCGSMNYAIRVFERAKCKDVV 635
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+W A+++ M+G+ K A +F ++ + G+ P+ +F+ LL C+H+ LV+EG+ + + M
Sbjct: 636 LWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIM 695
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ L P EHY C+VD+LGRSGQ +EA+E IK+MPM+P + VW ALL CR+H+ L
Sbjct: 696 VSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGL 755
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A N+L+ LEP N GNY+L+SN+++ KWN+A + R+ M ++G++K CSW+E+
Sbjct: 756 AVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGN 815
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKL-KAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
+H F GD H SE I+ KL E+ L + G+V T VL D EEEK L HSE
Sbjct: 816 NIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSE 875
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
++A+AFGLI+T P IRIAKNLRVCGDCHE KL+SK+ R+I+VRD NRFH F GSC
Sbjct: 876 RIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSC 935
Query: 599 SCKDFW 604
SC+DFW
Sbjct: 936 SCEDFW 941
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 208/416 (50%), Gaps = 9/416 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE---GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIV 57
++ ++S+ A+ Y +MR G P T VLKAC E D + G H L V
Sbjct: 132 LVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAV 191
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEA 115
K GLD V +L+ +Y CG L AL+VF+ + ++V SW +++SG + G EA
Sbjct: 192 KVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEA 251
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+ +FR + G +S++ V VL C +LG LS + +H + + G N+ +L+ +
Sbjct: 252 LALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNI-QCNALLVM 310
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
YAK G ++ A RVF Q+ EKD +SW+SM+ Y N F EA+D F M + +P++ +
Sbjct: 311 YAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACV 370
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
V + SA L L G ++ + ++ +G TL+DMY KCG + + KVF M
Sbjct: 371 VSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGI 430
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+D + W +++ + + A + +L+K GI + +L C + +Q
Sbjct: 431 RDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQV 490
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
R L ++E+ ++D+ G G+ D + L + + + + + W +++ C
Sbjct: 491 HCYAIRNGLLDLILENR--LIDIYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCC 543
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 240/502 (47%), Gaps = 44/502 (8%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G V N A+ + M++ GF ++T VL+ CA LG H+ ++K G
Sbjct: 238 VVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG 297
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + +LL +Y G + AL+VF I +K+ +SW +++S Y+ EAI+ F
Sbjct: 298 SELN-IQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFG 356
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G +PD +V + +A L L+ + H Y + ++ V +L+D+Y KCG
Sbjct: 357 EMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCG 416
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E + +VF+ M +D +SW++++ +A + EAL+M +Q+E + + + +L
Sbjct: 417 SIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILE 476
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C L ++ L + RN L + +L LID+Y +CG + +F+ ++ KD V
Sbjct: 477 TCCGLKSISLLKQVHCYAIRNGLL-DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVS 535
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++++ + NG + A +F +++K IQP+ V +L + +G+Q +
Sbjct: 536 WTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLI 595
Query: 361 R---------VFSLTPMIEHYGC-----------------------MVDLLGRSGQLDEA 388
R V SL M + GC M++ G G +A
Sbjct: 596 RRNFPIEGPVVSSLVDM--YSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQA 653
Query: 389 HELIKSM---PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA---LEPWNSGNYVLLS 442
+L K M + P+ + + ALL C K + +H L+ +++ L+PW +Y +
Sbjct: 654 IDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQE-HYACVV 712
Query: 443 NIYSASHKWNDAAK-IRSMMGD 463
+I S + +A + I++M D
Sbjct: 713 DILGRSGQTEEAYEFIKTMPMD 734
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 196/390 (50%), Gaps = 11/390 (2%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL---DCDEFVKTSLLNLYVHCGYLADA 84
P + +VL A G + H+ V G D D F+ T L+ +Y CG + DA
Sbjct: 55 PAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDA 114
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF---RRLLHRGLKPDSFSIVRVLTAC 141
++F+ +P + V SW A++ Y++ G+ EA+ ++ R G PD ++ VL AC
Sbjct: 115 RRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKAC 174
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD--QMPEKDIVS 199
GD +HG + G ++ VA +L+ +YAKCG ++ A RVF+ Q +D+ S
Sbjct: 175 GAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVAS 234
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W+S++ G NG EAL +F MQ YT V VL CA LG L LG + +
Sbjct: 235 WNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALL 294
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
+ N + L+ MYAK GR+ A +VF ++ +KD + WN+++S N + A
Sbjct: 295 KCGSELN-IQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAID 353
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
FG++ + G QP+ V L H ++ GR+ F++ + L ++ ++D+
Sbjct: 354 FFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGRE-FHAYAIKQRLHTDLQVGNTLMDMY 412
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ G ++ + ++ +SM + + I W +LA
Sbjct: 413 IKCGSIECSAKVFESMGIRDH-ISWTTILA 441
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/622 (38%), Positives = 364/622 (58%), Gaps = 53/622 (8%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L ACA HS ++ G D FV +L++ Y CG + DA+ VF+ + K+
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324
Query: 96 VVSWTAIISGYINEGNL-----------------------------------EEAINMFR 120
VVSW A+++GY G +EA++ F+
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY------------VNEAGKGRNVFV 168
+++ G +P+S +I+ +L+AC LG LS H Y G G ++ V
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNM--Q 224
+L+D+Y+KC + + AR +F+ +P E+++V+W+ MI GYA G +AL +F M +
Sbjct: 445 HNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISK 504
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV--LGTTLIDMYAKCGR 282
+ P YT+ +L ACA L +L +G +++ R+ + V + LIDMY+KCG
Sbjct: 505 PYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGD 564
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ A VF M +++V W +++SG M+G K A +F +++K G P+ +F+ LL
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
C+H+G+VD+G +F+ M + + +HY C++DLL RSG+LD+A + I+ MPMEP+A
Sbjct: 625 CSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAA 684
Query: 403 VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMG 462
+W ALL+ CR+H +LAE+ LN+L++++ N G+Y L+SNIY+ + +W D A+IR +M
Sbjct: 685 IWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMK 744
Query: 463 DKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLF 522
GI+K GCSWV+ F VGD SHPLS +IYS L+ L ++K G+VP T+ L
Sbjct: 745 KSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALH 804
Query: 523 DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREI 582
D+++EEK L HSEKLALA+GL+TT+P IRI KNLRVCGDCH A ISKI EI
Sbjct: 805 DVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEI 864
Query: 583 IVRDNNRFHCFIEGSCSCKDFW 604
IVRD++RFH F GSCSC +W
Sbjct: 865 IVRDSSRFHHFKNGSCSCGGYW 886
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 227/488 (46%), Gaps = 62/488 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++R + AI M G P +FT P+ LKAC ++ G H LI G
Sbjct: 120 LVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNG 179
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK---NVVSWTAIISGYINEGNLEEAIN 117
+ + FV +L+ +Y G L DA VFD+I K +V+SW +I++ ++ N A++
Sbjct: 180 FESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALD 239
Query: 118 MFRRL---LHRGL---KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+F + +H + D SIV +L AC L L K IH Y G + FV +
Sbjct: 240 LFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNA 299
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL--- 228
L+D YAKCG+M+ A VF+ M KD+VSW++M+ GY +G A ++F NM++EN+
Sbjct: 300 LIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLD 359
Query: 229 --------------------------------KPEYYTMVGVLSACASLGALELGVWASS 256
+P T++ +LSACASLGAL G+ +
Sbjct: 360 VITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHA 419
Query: 257 FMERNEFLS------------NPVLGTTLIDMYAKCGRMAQACKVFREM--KDKDQVVWN 302
+ + LS + V+ LIDMY+KC A +F + ++++ V W
Sbjct: 420 YSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWT 479
Query: 303 AVVSGLSMNGYVKVAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
++ G + G A +F ++ + + PN T +L C H + G+Q ++
Sbjct: 480 VMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVT 539
Query: 361 RVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R + C++D+ + G +D A + SMP + N + W ++++G +H +
Sbjct: 540 RHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSMMSGYGMHGRGKE 598
Query: 420 AEHVLNQL 427
A + +++
Sbjct: 599 ALDIFDKM 606
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 202/455 (44%), Gaps = 62/455 (13%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T ++ Y+ CG +DAL V + + V W ++ +I EG L+ AI + R+L G K
Sbjct: 87 TGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTK 146
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
PD F++ L AC +L + HG + G NVFV +LV +Y++ G++E A V
Sbjct: 147 PDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLV 206
Query: 189 FDQMPEK---DIVSWSSMIQGYASNGFPKEALDMFYNM------QRENLKPEYYTMVGVL 239
FD++ K D++SW+S++ + P+ ALD+F M + N + + ++V +L
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNIL 266
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACASL AL S+ RN ++ + LID YAKCG M A VF M+ KD V
Sbjct: 267 PACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVV 326
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEK--------------------------------- 326
WNA+V+G + +G AF +F + K
Sbjct: 327 SWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQM 386
Query: 327 --CGIQPNGNTFVGLLCGCTHAGLVDEGRQF--FNSMSRVFSLTPMIEH---------YG 373
G +PN T + LL C G + +G + ++ + SL +
Sbjct: 387 ILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHN 446
Query: 374 CMVDLLGRSGQLDEAHELIKSMP-MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEP 432
++D+ + A + S+P E N + W ++ G + ++ A + +++I
Sbjct: 447 ALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMI---- 502
Query: 433 WNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
S Y + N Y+ S A + S+ K I
Sbjct: 503 --SKPYAVAPNAYTISCILMACAHLSSLRMGKQIH 535
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 123/252 (48%), Gaps = 11/252 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL--PTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G+ A++ ++ M ++ + P +T +L ACA ++G + H+ + +
Sbjct: 481 MIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTR 540
Query: 59 AGL--DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
FV L+++Y CG + A VFD +P +N VSWT+++SGY G +EA+
Sbjct: 541 HHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEAL 600
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDL 175
++F ++ G PD S + +L AC+ G + + ++ G + ++DL
Sbjct: 601 DIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDL 660
Query: 176 YAKCGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPE 231
A+ G ++KA + +MP E W +++ +++ + AL+ +M+ EN
Sbjct: 661 LARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAEN--DG 718
Query: 232 YYTMVGVLSACA 243
YT++ + A A
Sbjct: 719 SYTLISNIYATA 730
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 116/299 (38%), Gaps = 48/299 (16%)
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
H YV+ G T +V Y CG A V +++ V W+ +++ + G
Sbjct: 77 HSYVSPKSLG------TGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRL 130
Query: 214 KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
A+ + M R KP+++T+ L AC L + G + N F SN + L
Sbjct: 131 DRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNAL 190
Query: 274 IDMYAKCGRMAQACKVFREMKDK---DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
+ MY++ G + A VF E+ K D + WN++V+ + A +F ++ +
Sbjct: 191 VAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHE 250
Query: 331 PNGN------TFVGLLCGCTHAGLVDEGRQFFN------SMSRVFSLTPMIEHYG----- 373
N + V +L C + + ++ + + + F +I+ Y
Sbjct: 251 KATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSM 310
Query: 374 -------------------CMVDLLGRSGQLDEAHELIKSMPMEP---NAIVWGALLAG 410
MV +SG+ A EL K+M E + I W A++AG
Sbjct: 311 KDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAG 369
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/581 (40%), Positives = 347/581 (59%), Gaps = 8/581 (1%)
Query: 29 TNFTFPF-VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN---LYVHCGYLADA 84
+N T P +L C + + + + +K L D V T +N L + A
Sbjct: 18 SNTTHPLSLLPKCTSLRELK---QLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHA 74
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+FD IP ++V + + GY A +F ++L GL PD ++ +L AC
Sbjct: 75 HHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASC 134
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
L + +H + G NV+V +L+++Y C M+ ARRVFD++ E +V++++MI
Sbjct: 135 KALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMI 194
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GYA P EAL +F +Q NLKP TM+ VLS+CA LGAL+LG W ++++N F
Sbjct: 195 TGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFN 254
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ T LIDMYAKCG + A VF M +D W+A++ +++G+ A +F ++
Sbjct: 255 RFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEM 314
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
K G +P+ TF+GLL C+H GLV+EG ++F M + + P I+HYGCMVDLLGR+G+
Sbjct: 315 RKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGR 374
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
L+EA+E I +P+ P I+W LL+ C H +L + V+ Q+ L+ + G+Y++LSN+
Sbjct: 375 LEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNL 434
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
+ + +W D +R +M ++G+ KI GCS VEV+ VVHEF GD H +S K++ LDEL
Sbjct: 435 CARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDEL 494
Query: 505 ATKLKAAGFVPTTDHVLF-DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRV 563
+LK G+VP T V D+E+EEK+ L HSEKLA+ FGL+ T P IR+ KNLRV
Sbjct: 495 VKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRV 554
Query: 564 CGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CGDCH A KLIS I R+II+RD RFH F +G CSC+D+W
Sbjct: 555 CGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 190/350 (54%), Gaps = 5/350 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG+ D A + + G P ++TFP +LKACA + G + H L +K G
Sbjct: 92 MARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLG 151
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + +V +L+N+Y C + A +VFD I + VV++ A+I+GY EA+++FR
Sbjct: 152 LSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFR 211
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L R LKP +++ VL++C LG L KW+H YV + G R V V T+L+D+YAKCG
Sbjct: 212 ELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCG 271
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A VF+ M +D +WS+MI YA +G +A+ +F M++ +P+ T +G+L
Sbjct: 272 SLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLY 331
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDKDQ 298
AC+ G +E G + + R+++ P + ++D+ + GR+ +A + + +
Sbjct: 332 ACSHTGLVEEG-FEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPT 390
Query: 299 -VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
++W ++S +G V++ V Q+ + +G ++ L C AG
Sbjct: 391 PILWRTLLSACGSHGNVELGKRVIEQIFELD-DSHGGDYIILSNLCARAG 439
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/569 (42%), Positives = 350/569 (61%), Gaps = 38/569 (6%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
TS++ Y G L A + FD++P+++VVSW A+ S Y + +EA+N+F ++L G+
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGIT 255
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
PD + V +++C+ +GD + A I +++ N FV T+L+D++AK GN+E AR +
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNI 315
Query: 189 FDQ--------------------------------MPEKDIVSWSSMIQGYASNGFPKEA 216
FD+ MP++D+VSW+SMI GYA NG +
Sbjct: 316 FDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMS 375
Query: 217 LDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
+++F M +++P+ T+ VLSAC +GAL+L W + +LI
Sbjct: 376 IELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIF 435
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MY+KCG +A A ++F+ M +D V +N ++SG + NG+ K A + +E+ GI+P+ T
Sbjct: 436 MYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVT 495
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
++G+L C+HAGL++EG+ F S+ P ++HY CMVDLLGR+G+LDEA LI+SM
Sbjct: 496 YIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSM 550
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
PM+P+A V+G+LL R+HK+ L E ++L LEP N GNYVLLSNIY++ +W D
Sbjct: 551 PMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVK 610
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
++R MM G++K G SWVE G VH+F VGD SH S+ IY L EL K+K GFV
Sbjct: 611 RVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVA 670
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
L D+EEEEK+ L HSEKLA+ F L+ + IR+ KNLR+C DCH AIK+IS
Sbjct: 671 DKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMIS 730
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K+ GREI+VRDNNRFHCF EG CSC D+W
Sbjct: 731 KLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 195/443 (44%), Gaps = 79/443 (17%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++ + + + + P F + +++K + G H+ ++K G
Sbjct: 71 MLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKS-----GNLFHAYVLKLG 125
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D F++ ++L++Y G + A +F+ + ++ + W ++ISG GN EA+ +F
Sbjct: 126 HIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFN 185
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ RN+ TS+V YAK G
Sbjct: 186 MM---------------------------------------PARNIITWTSMVTGYAKMG 206
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E ARR FD+MPE+ +VSW++M YA PKEAL++F+ M E + P+ T V +S
Sbjct: 207 DLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTIS 266
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK--------------------- 279
+C+S+G L +++ + N + T L+DM+AK
Sbjct: 267 SCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAV 326
Query: 280 -----------CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC- 327
G+++ A ++F M +D V WN++++G + NG ++ +F ++ C
Sbjct: 327 TWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCM 386
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
IQP+ T +L C H G + + + R ++ I + ++ + + G + +
Sbjct: 387 DIQPDEVTIASVLSACGHIGALKLSYWVLD-IVREKNIKLGISGFNSLIFMYSKCGSVAD 445
Query: 388 AHELIKSMPMEPNAIVWGALLAG 410
AH + ++M + + + L++G
Sbjct: 446 AHRIFQTMGTR-DVVSFNTLISG 467
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 5/196 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+ N +IE + M + P T VL AC +L ++ +
Sbjct: 362 MIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREK 421
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ SL+ +Y CG +ADA ++F + ++VVS+ +ISG+ G+ +EAI +
Sbjct: 422 NIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLV 481
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G++PD + + VLTAC+ G L+ K V ++ + V +VDL +
Sbjct: 482 LTMEEEGIEPDHVTYIGVLTACSHAGLLNEGK----NVFKSIQAPTVDHYACMVDLLGRA 537
Query: 180 GNMEKARRVFDQMPEK 195
G +++A+ + MP K
Sbjct: 538 GELDEAKMLIQSMPMK 553
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/636 (37%), Positives = 363/636 (57%), Gaps = 32/636 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I + +++ YN M G N +L +++ LG++ H +VK
Sbjct: 112 LISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKF 171
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV---------------------- 97
G FV + L+++Y G + A + FD++P+KNVV
Sbjct: 172 GFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLF 231
Query: 98 ---------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
SWTA+I+G+ G EAI++FR + L+ D ++ VLTAC + L
Sbjct: 232 YDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQ 291
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K +H Y+ N+FV ++LVD+Y KC +++ A VF +M K++VSW++M+ GY
Sbjct: 292 EGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYG 351
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
NG+ +EA+ +F +MQ ++P+ +T+ V+S+CA+L +LE G + +S
Sbjct: 352 QNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFIT 411
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ L+ +Y KCG + + ++F EM D+V W A+VSG + G +F + G
Sbjct: 412 VSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHG 471
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
+P+ TF+G+L C+ AGLV +G Q F SM + + P+ +HY CM+DL R+G+L+EA
Sbjct: 472 FKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEA 531
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
+ I MP P+AI W +LL+ CR H+ ++ + L+ LEP N+ +Y+LLS+IY+A
Sbjct: 532 RKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAK 591
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
KW + A +R M DKG++K GCSW++ VH F D S+P S++IYS+L++L K+
Sbjct: 592 GKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKM 651
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
G+VP + VL D+++ EK L HSEKLA+AFGLI P IR+ KNLRVCGDCH
Sbjct: 652 VQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCH 711
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A K ISKIT REI+VRD RFH F +G CSC DFW
Sbjct: 712 NATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 204/421 (48%), Gaps = 65/421 (15%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV---------------- 96
H I+KA + + F+ +L++ Y + A +VFD +P +N+
Sbjct: 32 HCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACL 91
Query: 97 ---------------VSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTA 140
VSW ++IS Y G L +++ + +L+ G + ++ +L
Sbjct: 92 PEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLIL 151
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV-- 198
++ G + +HG+V + G VFV + LVD+Y+K G + AR+ FD+MPEK++V
Sbjct: 152 ASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMY 211
Query: 199 -----------------------------SWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
SW++MI G+ NG +EA+D+F M+ ENL+
Sbjct: 212 NTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLE 271
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
+ YT VL+AC + AL+ G +++ R ++ N +G+ L+DMY KC + A V
Sbjct: 272 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETV 331
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
FR+M K+ V W A++ G NGY + A +F ++ GI+P+ T ++ C + +
Sbjct: 332 FRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASL 391
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+EG Q F+ + V L I +V L G+ G ++++H L M + + W AL++
Sbjct: 392 EEGAQ-FHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSY-VDEVSWTALVS 449
Query: 410 G 410
G
Sbjct: 450 G 450
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 137/334 (41%), Gaps = 67/334 (20%)
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE------ 194
C L K IH ++ +A + +F+ +LV YAK + ARRVFDQMP+
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 195 -------------------------KDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-- 227
+D+VSW+S+I YA GF +++ YN+ N
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKA-YNLMLYNGP 137
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK-------- 279
+ +L + G + LG+ + + F S +G+ L+DMY+K
Sbjct: 138 FNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCAR 197
Query: 280 -----------------------CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
C R+ + ++F +M++KD + W A+++G + NG +
Sbjct: 198 QAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDRE 257
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A +F ++ ++ + TF +L C + EG+Q + R I +V
Sbjct: 258 AIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT-DYQDNIFVGSALV 316
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
D+ + + A + + M + N + W A+L G
Sbjct: 317 DMYCKCKSIKSAETVFRKMNCK-NVVSWTAMLVG 349
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/569 (42%), Positives = 350/569 (61%), Gaps = 38/569 (6%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
TS++ Y G L A + FD++P+++VVSW A+ S Y + +EA+N+F ++L G+
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGIT 255
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
PD + V +++C+ +GD + A I +++ N FV T+L+D++AK GN+E AR +
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNI 315
Query: 189 FDQ--------------------------------MPEKDIVSWSSMIQGYASNGFPKEA 216
FD+ MP++D+VSW+SMI GYA NG +
Sbjct: 316 FDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMS 375
Query: 217 LDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
+++F M +++P+ T+ VLSAC +GAL+L W + +LI
Sbjct: 376 IELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIF 435
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MY+KCG +A A ++F+ M +D V +N ++SG + NG+ K A + +E+ GI+P+ T
Sbjct: 436 MYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVT 495
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
++G+L C+HAGL++EG+ F S+ P ++HY CMVDLLGR+G+LDEA LI+SM
Sbjct: 496 YIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSM 550
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
PM+P+A V+G+LL R+HK+ L E ++L LEP N GNYVLLSNIY++ +W D
Sbjct: 551 PMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVK 610
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
++R MM G++K G SWVE G VH+F VGD SH S+ IY L EL K+K GFV
Sbjct: 611 RVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVA 670
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
L D+EEEEK+ L HSEKLA+ F L+ + IR+ KNLR+C DCH AIK+IS
Sbjct: 671 DKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMIS 730
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K+ GREI+VRDNNRFHCF EG CSC D+W
Sbjct: 731 KLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 195/443 (44%), Gaps = 79/443 (17%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++ + + + + P F + +++K + G H+ ++K G
Sbjct: 71 MLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKS-----GNMFHAYVLKLG 125
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D F++ ++L++Y G + A +F+ + ++ + W ++ISG GN EA+ +F
Sbjct: 126 HIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFN 185
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ RN+ TS+V YAK G
Sbjct: 186 MM---------------------------------------PARNIITWTSMVTGYAKMG 206
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E ARR FD+MPE+ +VSW++M YA PKEAL++F+ M E + P+ T V +S
Sbjct: 207 DLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTIS 266
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK--------------------- 279
+C+S+G L +++ + N + T L+DM+AK
Sbjct: 267 SCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAV 326
Query: 280 -----------CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC- 327
G+++ A ++F M +D V WN++++G + NG ++ +F ++ C
Sbjct: 327 TWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCM 386
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
IQP+ T +L C H G + + + R ++ I + ++ + + G + +
Sbjct: 387 DIQPDEVTIASVLSACGHIGALKLSYWVLD-IVREKNIKLGISGFNSLIFMYSKCGSVAD 445
Query: 388 AHELIKSMPMEPNAIVWGALLAG 410
AH + ++M + + + L++G
Sbjct: 446 AHRIFQTMGTR-DVVSFNTLISG 467
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 5/196 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+ N +IE + M + P T VL AC +L ++ +
Sbjct: 362 MIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREK 421
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ SL+ +Y CG +ADA ++F + ++VVS+ +ISG+ G+ +EAI +
Sbjct: 422 NIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLV 481
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G++PD + + VLTAC+ G L+ K V ++ + V +VDL +
Sbjct: 482 LTMEEEGIEPDHVTYIGVLTACSHAGLLNEGK----NVFKSIQAPTVDHYACMVDLLGRA 537
Query: 180 GNMEKARRVFDQMPEK 195
G +++A+ + MP K
Sbjct: 538 GELDEAKMLIQSMPMK 553
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/589 (40%), Positives = 352/589 (59%), Gaps = 37/589 (6%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA--LKVFDDIPDKNVVSWTAIISGYINEG 110
H+ I+ GLD +V L+ D L +F+ + N + A+I GY+ E
Sbjct: 66 HARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNALIRGYLIEE 125
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVA 169
L+E+ + + G+ P SF+ + AC D+ + IHG + G G ++ V
Sbjct: 126 RLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVG 185
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS--------------------------- 202
S++D+Y KCG +E R+VFD+MP +D++SW+
Sbjct: 186 NSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMV 245
Query: 203 ----MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
M+ G+A N P+EA+ F MQ ++ + T++GV+SACA LGA + W
Sbjct: 246 AWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVA 305
Query: 259 ERNEF--LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
E++EF + V+G+ LIDMY+KCG + A +VF+ MK+++ +++++ G +M+G V
Sbjct: 306 EKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHD 365
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A +F ++ K I+PN TF+G+L C+HAG+V++G Q F M + + + P +HY CMV
Sbjct: 366 AMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMV 425
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSG 436
DLLGR+G+L EAHEL+K+MP+EP+ VWGALL CR+HK D+A N L LEP+ G
Sbjct: 426 DLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIG 485
Query: 437 NYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD-GVVHEFLVGDNSHPLSE 495
NY+LL+NIY++ +WND + +R +M +G++K SW+E + G+VHEF GD +HP S
Sbjct: 486 NYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSG 545
Query: 496 KIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVI 555
+I L++L +L+A G+ P V +D+ +E+K+ L HSEKLALAFGLI+T P I
Sbjct: 546 EIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALAFGLISTIPGSKI 605
Query: 556 RIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
RI KNLR+C DCH I S+ITGREIIVRD RFH F +G CSC +FW
Sbjct: 606 RIVKNLRICEDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCGNFW 654
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 188/353 (53%), Gaps = 36/353 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSH-SLIVKA 59
+IRG++ + + + EFY+ MR EG +P +FTF + KAC + D LG + H I+
Sbjct: 117 LIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVG 176
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE------ 113
G D V S++++Y+ CG+L KVFD++P+++V+SWT +IS Y+ GN+E
Sbjct: 177 GFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELF 236
Query: 114 -------------------------EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
EAI F ++ G++ D +++ V++AC QLG
Sbjct: 237 DGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAK 296
Query: 149 TAKWIHGYV--NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
A WI +E G +V V ++L+D+Y+KCG++ A RVF M E+++ S+SSMI G
Sbjct: 297 YADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILG 356
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
+A +G +A+ +F M + +KP T +GVL+AC+ G +E G ME+ +
Sbjct: 357 FAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKP 416
Query: 267 PVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
T ++D+ + GR+ +A ++ + M + VW A++ ++ +A
Sbjct: 417 SADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIA 469
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 140/342 (40%), Gaps = 57/342 (16%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM--EKARRVFDQ 191
IV L C +L+ K +H + G ++ +V L+ K +F+Q
Sbjct: 49 IVTTLDGCK---NLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQ 105
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+ + ++++I+GY KE+ + + M++E + P +T + AC + + LG
Sbjct: 106 VNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLG 165
Query: 252 --VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD-------------- 295
+ + + F + +G ++IDMY KCG + KVF EM +
Sbjct: 166 RQIHGQTILV-GGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYV 224
Query: 296 -----------------KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
KD V W +VSG + N + A F ++++ G++ + T +G
Sbjct: 225 KSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIG 284
Query: 339 LLCGCTHAGL---------VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
++ C G V E +F S V ++D+ + G + +A+
Sbjct: 285 VISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVG--------SALIDMYSKCGSVGDAY 336
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
+ + M E N + +++ G +H + A + ++++ E
Sbjct: 337 RVFQGMK-ERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTE 377
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/605 (39%), Positives = 364/605 (60%), Gaps = 2/605 (0%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGV--RSHSLIVKA 59
I G V + QHA+E M++ G +P FT +LKACA + + H ++KA
Sbjct: 275 ISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKA 334
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D D+++ +L+++Y G L DA KVF+ IP K+++ W A+ISG + G E++++F
Sbjct: 335 CADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLF 394
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ G + ++ VL + L +S +H + G + V L+D Y KC
Sbjct: 395 CRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKC 454
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ A +VF++ +I++++SMI + ++A+ +F M R+ L+P+ + + +L
Sbjct: 455 NCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLL 514
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+ACASL A E G + + + +F+++ G L+ YAKCG + A F + DK V
Sbjct: 515 NACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVV 574
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W+A++ GL+ +G+ K A VF ++ I PN T +LC C HAGLVDE + +F+SM
Sbjct: 575 SWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSM 634
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+F + EHY CM+DLLGR+G+LD+A EL+ SMP E NA VWGALLA R+H+ +L
Sbjct: 635 KEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPEL 694
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ +L LEP SG +VLL+N Y+++ W++ AK+R +M D ++K SWVE+
Sbjct: 695 GKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKD 754
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F+VGD SHP + IY+KL+EL + AG+VP + L D+++ EK+ L+ HSE+
Sbjct: 755 RVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSER 814
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AF LI+T IR+ KNLR+C DCH A K ISKI REII+RD NRFH F +G+CS
Sbjct: 815 LAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACS 874
Query: 600 CKDFW 604
C D+W
Sbjct: 875 CGDYW 879
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 184/343 (53%), Gaps = 6/343 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ + +N + A+ + +MR G F P VLK CA D LGV+ H++ V G
Sbjct: 74 LVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAP--DAGLGVQVHAVAVSTG 130
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
L D FV +L+ +Y G++ +A +VFD+ D+N VSW ++S ++ +A+ +F
Sbjct: 131 LSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELF 190
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G++P+ F V+ ACT DL + +H V G ++VF A +LVD+Y+K
Sbjct: 191 GEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKL 250
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ A VF ++P+ D+VSW++ I G +G + AL++ M+ L P +T+ +L
Sbjct: 251 GDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSIL 310
Query: 240 SACASLGALELGVWAS--SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
ACA GA + FM + S+ +G L+DMYAK G + A KVF + KD
Sbjct: 311 KACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKD 370
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
++WNA++SG S G + +F ++ K G N T +L
Sbjct: 371 LLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVL 413
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 194/382 (50%), Gaps = 13/382 (3%)
Query: 34 PFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD 93
P + + A + F LG H+ ++K+GL + LL+ Y C A +VFD+ PD
Sbjct: 9 PLLTRYAATQSLF-LGAHIHAHLLKSGLL--HAFRNHLLSFYSKCRLPGSARRVFDETPD 65
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
VSW+++++ Y N EA+ FR + RG++ + F++ VL G +
Sbjct: 66 PCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG---LGVQV 122
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGF 212
H G ++FVA +LV +Y G +++ARRVFD+ +++ VSW+ M+ + N
Sbjct: 123 HAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDR 182
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+A+++F M ++P + V++AC LE G + + R + +
Sbjct: 183 CSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANA 242
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+DMY+K G + A VF ++ D V WNA +SG ++G+ + A + Q++ G+ PN
Sbjct: 243 LVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPN 302
Query: 333 GNTFVGLL--CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-CMVDLLGRSGQLDEAH 389
T +L C AG GRQ M + + + ++ G +VD+ + G LD+A
Sbjct: 303 VFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSD--DYIGVALVDMYAKYGLLDDAR 360
Query: 390 ELIKSMPMEPNAIVWGALLAGC 411
++ + +P + + ++W AL++GC
Sbjct: 361 KVFEWIPRK-DLLLWNALISGC 381
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 152/309 (49%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G C ++ + MR EG T VLK+ A + H+L K G
Sbjct: 377 LISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIG 436
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V L++ Y C L A KVF++ N++++T++I+ + E+AI +F
Sbjct: 437 FLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFM 496
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L +GL+PD F + +L AC L K +H ++ + +VF +LV YAKCG
Sbjct: 497 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCG 556
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A F +P+K +VSWS+MI G A +G K ALD+F M E + P + T+ VL
Sbjct: 557 SIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLC 616
Query: 241 ACASLGAL-ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC G + E + SS E + +ID+ + G++ A ++ M + +
Sbjct: 617 ACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANA 676
Query: 299 VVWNAVVSG 307
VW A+++
Sbjct: 677 AVWGALLAA 685
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 157/326 (48%), Gaps = 28/326 (8%)
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG---KGRNVFVATSLVDLYAKCGNMEKA 185
P+S S + A TQ L IH ++ ++G RN L+ Y+KC A
Sbjct: 4 PESISPLLTRYAATQ--SLFLGAHIHAHLLKSGLLHAFRN-----HLLSFYSKCRLPGSA 56
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC--A 243
RRVFD+ P+ VSWSS++ Y++N P+EAL F M+ ++ + + VL A
Sbjct: 57 RRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDA 116
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM-KDKDQVVWN 302
LG V S+ + + F++N L+ MY G + +A +VF E +D++ V WN
Sbjct: 117 GLGVQVHAVAVSTGLSGDIFVAN-----ALVAMYGGFGFVDEARRVFDEAARDRNAVSWN 171
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
++S N A +FG++ G++PN F ++ CT + ++ GR+ + R
Sbjct: 172 GMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRT 231
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ +VD+ + G + A + +P + + + W A ++GC LH +H
Sbjct: 232 -GYDKDVFTANALVDMYSKLGDIHMAALVFGKVP-KTDVVSWNAFISGCVLHGHD---QH 286
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSAS 448
L L+ ++ +SG L+ N+++ S
Sbjct: 287 ALELLLQMK--SSG---LVPNVFTLS 307
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/584 (38%), Positives = 353/584 (60%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M+ EG +P +T+P +L+ C LG + H+ ++K+G + +V + L+++Y G
Sbjct: 406 MQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGE 465
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
L A + + +++VVSWTA+I+GY EA+ +F+ + ++G++ D+ ++A
Sbjct: 466 LDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISA 525
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
C + L+ + IH +G ++ + +LV LYA+CG + A F+++ KD +SW
Sbjct: 526 CAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISW 585
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+++I G+A +G +EAL +F M + ++ +T +SA A+ ++ G + M +
Sbjct: 586 NALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIK 645
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ S LI +Y+KCG + A + F EM +K+ V WNA+++G S +GY A +
Sbjct: 646 TGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSL 705
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F ++++ G+ PN TFVG+L C+H GLV+EG +F SMS+ L P EHY C+VDLLG
Sbjct: 706 FEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLG 765
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
R+ L A E I+ MP+EP+A++W LL+ C +HK ++ E L+ LEP +S YVL
Sbjct: 766 RAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVL 825
Query: 441 LSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSK 500
LSN+Y+ S KW+ + R MM D+G++K G SW+EV +H F VGD HPL+E+IY
Sbjct: 826 LSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEY 885
Query: 501 LDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKN 560
+D+L + G+V ++L D+E+E+K HSEKLA+AFGL++ IR+ KN
Sbjct: 886 IDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKN 945
Query: 561 LRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LRVC DCH IK +SKI+ R I+VRD RFH F G CSCKD+W
Sbjct: 946 LRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 215/427 (50%), Gaps = 2/427 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N AI + M +PT + F VL AC + F+LG + H IVK G
Sbjct: 184 MISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWG 243
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + FV +L+ LY G L A ++F + ++ +S+ ++ISG G + A+ +F
Sbjct: 244 LSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFE 303
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ +KPD ++ +L+AC +G K +H YV + G ++ + SL+DLY KC
Sbjct: 304 KMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCF 363
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A F +++V W+ M+ Y G E+ +F MQ E L P YT +L
Sbjct: 364 DIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILR 423
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C SLGAL+LG + + ++ F N + + LIDMYAK G + A + + ++++D V
Sbjct: 424 TCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS 483
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A+++G + + A +F ++E GI+ + F + C +++G+Q ++ S
Sbjct: 484 WTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQ-IHAQS 542
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + +V L R G+ +A+ + + + N I W AL++G + A
Sbjct: 543 YISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDN-ISWNALISGFAQSGHCEEA 601
Query: 421 EHVLNQL 427
V +Q+
Sbjct: 602 LQVFSQM 608
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 218/417 (52%), Gaps = 7/417 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKA 59
+I G ++ + ++ M E P TF VL+AC+ + FQ+ + H+ I+
Sbjct: 82 VISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHH 141
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G V L++LY G++ A VF+ + K+ VSW A+ISG G +EAI +F
Sbjct: 142 GFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLF 201
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ + P + VL+ACT++ + +HG++ + G FV +LV LY++
Sbjct: 202 CQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRW 261
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+ A ++F +M +D +S++S+I G A GF AL +F MQ + +KP+ T+ +L
Sbjct: 262 GNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLL 321
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACAS+GA G S++ + S+ ++ +L+D+Y KC + A + F + ++ V
Sbjct: 322 SACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVV 381
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+WN ++ G + ++ +F Q++ G+ PN T+ +L CT G +D G Q
Sbjct: 382 LWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIH--- 438
Query: 360 SRVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++V Y C ++D+ + G+LD A +++ + E + + W A++AG H
Sbjct: 439 TQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL-REEDVVSWTAMIAGYTQH 494
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 179/342 (52%), Gaps = 4/342 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ +D F A++ + M N+G N F + ACA G + H+ +G
Sbjct: 487 MIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISG 546
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + +L++LY CG DA F+ I K+ +SW A+ISG+ G+ EEA+ +F
Sbjct: 547 YSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFS 606
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++ + F+ ++A ++ K IH + + G + L+ LY+KCG
Sbjct: 607 QMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCG 666
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A+R F +MPEK++VSW++MI GY+ +G+ EA+ +F M++ L P + T VGVLS
Sbjct: 667 SIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLS 726
Query: 241 ACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ +G + G+ + S + + + P ++D+ + + A + EM + D
Sbjct: 727 ACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDA 786
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
++W ++S +++ +++ G F ++P + LL
Sbjct: 787 MIWRTLLSACTVHKNIEI--GEFAARHLLELEPEDSATYVLL 826
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 198/391 (50%), Gaps = 3/391 (0%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M G T+ ++ + C + H+ I K+G D ++ + + L+++Y+ G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
+ +A+K+FDDIP NV W +ISG + + + + +F ++ + PD + VL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 141 CT-QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
C+ + IH + G G + V L+DLY+K G+++ A+ VF+++ KD VS
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W +MI G + NG EA+ +F M + + P Y VLSAC + +LG F+
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
+ S + L+ +Y++ G + A ++F +M +D++ +N+++SGL+ G+ A
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQ 300
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F +++ ++P+ T LL C G +G+Q + + ++ + +I G ++DL
Sbjct: 301 LFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIE-GSLLDLY 359
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ ++ AHE + E N ++W +L
Sbjct: 360 VKCFDIETAHEYFLTTETE-NVVLWNVMLVA 389
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/532 (43%), Positives = 339/532 (63%), Gaps = 11/532 (2%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYIN-EGNLEEAINMFRRLL-HRGLKPDSFSIVRVLTAC 141
AL +F+ IP+ + + +IS N + + A +++ R+L H LKP+ F+ + AC
Sbjct: 59 ALSIFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKAC 118
Query: 142 TQLGDLSTAKWIHGYVNEAGKGR-NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
L + +H +V + + + FV +L++ YAKCG + R +F+Q+ + D+ SW
Sbjct: 119 GSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASW 178
Query: 201 SSMIQGYASNG--------FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
+S++ Y N E L +F MQ+ +K T+V ++SACA LGAL G
Sbjct: 179 NSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGA 238
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
WA ++ ++ N +GT LIDMY+KCG + AC++F ++ +D + +NA++ G +++G
Sbjct: 239 WAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHG 298
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
Y A +F ++ G+ P+ T V +C C+H GLV+EG F SM V+ + P +EHY
Sbjct: 299 YGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHY 358
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEP 432
GC+VDLLGR+G+L EA E + +MPM+PNA++W +LL R+H ++ E VL LI LEP
Sbjct: 359 GCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEP 418
Query: 433 WNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHP 492
SGNYVLLSN+Y++ ++W+D ++R +M D GI K+ G S VEV G +HEFL+GD +HP
Sbjct: 419 ETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHP 478
Query: 493 LSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPK 552
S++IY KL+E++ +L G P T VLFDIEEEEK+ L+ HSE+LA+AF LI +
Sbjct: 479 RSKEIYLKLEEMSRRLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHC 538
Query: 553 DVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI KNLRVCGDCH + KLISKI REIIVRD NRFH F EG+CSC D+W
Sbjct: 539 APIRIIKNLRVCGDCHTSSKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 590
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 172/319 (53%), Gaps = 13/319 (4%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVK-AGLDCDEFVKTSLLNLYVHCGYLADALK 86
P FTFP + KAC + + G H+ ++K CD FV+ +LLN Y CG +
Sbjct: 106 PNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRY 165
Query: 87 VFDDIPDKNVVSWTAIISGYI-NEGNL-------EEAINMFRRLLHRGLKPDSFSIVRVL 138
+F+ I ++ SW +I+S Y+ N G + E + +F + +K + ++V ++
Sbjct: 166 LFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALI 225
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
+AC +LG LS W H YV + N FV T+L+D+Y+KCG ++ A ++FDQ+P +D +
Sbjct: 226 SACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTL 285
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+++MI G+A +G+ +ALD+F M E L P+ T+V + +C+ +G +E G M
Sbjct: 286 CYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESM 345
Query: 259 ERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVK 315
+ + P L L+D+ + GR+ +A + M K + V+W +++ ++G ++
Sbjct: 346 -KEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLE 404
Query: 316 VAFGVFGQLEKCGIQPNGN 334
+ V L + + +GN
Sbjct: 405 IGEVVLKHLIQLEPETSGN 423
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/553 (43%), Positives = 334/553 (60%), Gaps = 43/553 (7%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H++ K G + + Y G + DA +VFD +P ++ VS+ ++I GY G++
Sbjct: 34 HAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDV 93
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
A +RL R L P + W TS+
Sbjct: 94 GSA----QRLFERVLAP------------------TPVTW-----------------TSM 114
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
V + + G++E ARRVF++MPE+D+VSW++MI G N P EAL +F M E P
Sbjct: 115 VAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNR 174
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
T+V VLSAC GALE G W F+E+ + LGT L+DMYAKCG + A +VF
Sbjct: 175 GTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTG 234
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDE 351
++ ++ WNA+++GL+MNGY A +F Q+E G + P+ TFVG+L C+HAG VD
Sbjct: 235 LRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDA 294
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G++ F ++ + + + ++EHY CMVDLL RSG L EAH+LI MPM+P+ +VW ALL GC
Sbjct: 295 GKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGC 354
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
RLHK +AE+V++++ E SG++VLLSN+Y+A +WN +R M KGI+KI G
Sbjct: 355 RLHKNVKMAENVISEM---EATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIPG 411
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
CS VE+DG +HEF+ GD SHP + I++KL E+ +++ G+V T V +DIE+EEK+
Sbjct: 412 CSSVEMDGSIHEFISGDKSHPSYDDIHAKLIEIGGRMQQHGYVTETAEVFYDIEDEEKEQ 471
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L HSEKLA+AFGLI P+ IRI KNLR C DCH KL+SKI REI+VRD RFH
Sbjct: 472 ALGYHSEKLAIAFGLIGGPPEATIRIVKNLRFCTDCHSFAKLVSKIYHREIVVRDRARFH 531
Query: 592 CFIEGSCSCKDFW 604
F G+CSC DFW
Sbjct: 532 HFRGGACSCNDFW 544
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 5/210 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G V N A+ + M EGF+P T VL AC + G H + K
Sbjct: 145 MISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKR 204
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L DEF+ T+L+++Y CG + AL+VF + +N +W A+I+G G +A++MFR
Sbjct: 205 LRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFR 264
Query: 121 RL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA--TSLVDLYA 177
++ L+ + PD + V VL AC+ G + K H Y G + + +VDL A
Sbjct: 265 QMELNGTVAPDEVTFVGVLLACSHAGFVDAGKE-HFYTIPQKYGVELILEHYACMVDLLA 323
Query: 178 KCGNMEKARRVFDQMPEK-DIVSWSSMIQG 206
+ G++++A ++ +MP K D+V W +++ G
Sbjct: 324 RSGHLQEAHKLITEMPMKPDVVVWRALLGG 353
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/609 (38%), Positives = 361/609 (59%), Gaps = 8/609 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN---EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIV 57
+I G+ N + A++ Y M + EG P TF L AC+ D G + V
Sbjct: 131 LIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTV 190
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
+G D V+ +L+N+Y CG L A KVFD + +++V++W +ISGY +G +A+
Sbjct: 191 ASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALE 250
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+F+R+ KP+ + + +LTACT L DL + IH V E G ++ + L+++Y
Sbjct: 251 LFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYT 310
Query: 178 KCGN-MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
KC + +E+AR+VF+++ +D+++W+ +I Y G K+ALD+F MQ EN+ P T+
Sbjct: 311 KCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLS 370
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VLSACA LGA G + + ++ VL +L++MY +CG + VF ++DK
Sbjct: 371 NVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDK 430
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
V W+ +++ + +G+ + F +L + G+ + T V L C+H G++ EG Q F
Sbjct: 431 SLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSF 490
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
SM L P H+ CMVDLL R+G+L+ A LI MP P+A+ W +LL+GC+LH
Sbjct: 491 LSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHND 550
Query: 417 TDLAEHVLNQLIALEPWNSGNYV-LLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
T A V ++L LE + + V LLSN+Y+ + +W+D K R+ + +K GCS++
Sbjct: 551 TKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNR---RAARKNPGCSYI 607
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
E++ VHEF+ GD SHP E I +++ L+ ++K AG+VP VL +++EEEK+ L
Sbjct: 608 EINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCY 667
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+A+GLI+T P + I KNLR C DCH A K IS+I GR+I+VRD+ RFH F
Sbjct: 668 HSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFEN 727
Query: 596 GSCSCKDFW 604
GSCSCKD+W
Sbjct: 728 GSCSCKDYW 736
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 244/476 (51%), Gaps = 15/476 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ F N ++ A+ +Y M EG P F + C+ D + G H++I++
Sbjct: 29 IVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQ 88
Query: 61 L-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L + D + T+L+ +Y C L A K FD++ K +V+W A+I+GY G+ A+ ++
Sbjct: 89 LLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIY 148
Query: 120 RRLLHR---GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+ ++ + G+KPD+ + L AC+ +GD+S + I +G + V +L+++Y
Sbjct: 149 QDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMY 208
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+KCG++E AR+VFD++ +D+++W++MI GYA G +AL++F M + KP T +
Sbjct: 209 SKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFI 268
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC-GRMAQACKVFREMKD 295
G+L+AC +L LE G ++ + + S+ V+G L++MY KC + +A +VF ++
Sbjct: 269 GLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRT 328
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+D + WN ++ G K A +F Q++ + PN T +L C G +G+
Sbjct: 329 RDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAV 388
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL-- 413
++ ++ M ++ R G LD+ + ++ + + + W L+A
Sbjct: 389 HALIASGRCKADVVLENSLM-NMYNRCGSLDDTVGVFAAI-RDKSLVSWSTLIAAYAQHG 446
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIR---SMMGDKGI 466
H +T L EH L E + + ++S + + SH ++ SM+GD G+
Sbjct: 447 HSRTGL-EHFWELL--QEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGL 499
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 198/378 (52%), Gaps = 7/378 (1%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG +ADAL VF I N VSWT I++ + G+ EA+ +RR++ GL+PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGR-NVFVATSLVDLYAKCGNMEKARRVFDQM 192
V + C+ DL + +H + E ++ + T+L+ +YA+C ++E AR+ FD+M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNM---QRENLKPEYYTMVGVLSACASLGALE 249
+K +V+W+++I GY+ NG + AL ++ +M E +KP+ T L AC+ +G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + + + S+ ++ LI+MY+KCG + A KVF +K++D + WN ++SG +
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
G A +F ++ +PN TF+GLL CT+ +++GR + + ++
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+ S L+EA ++ + + + I W L+ + + A + Q+
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTR-DVITWNILIVAYVQYGQAKDALDIFKQM-Q 358
Query: 430 LEPWNSGNYVLLSNIYSA 447
LE + N + LSN+ SA
Sbjct: 359 LENV-APNEITLSNVLSA 375
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/605 (38%), Positives = 356/605 (58%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GF+ N + A+EF+ ++N P + ++ A R G H+ +K G
Sbjct: 232 MLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNG 291
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V +L+++Y C ++ + FD + K+++SWT +GY +A+ + R
Sbjct: 292 FDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLR 351
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G+ D+ I +L AC L L K IHGY G V + +++D+Y +CG
Sbjct: 352 QLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYGECG 410
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A R+F+ + KD+VSW+SMI Y NG +AL++F +M+ L+P+Y T+V +LS
Sbjct: 411 IIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILS 470
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A SL L+ G F+ R F+ + TL+DMYA+CG + A K+F K+++ ++
Sbjct: 471 AVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLIL 530
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++S M+GY + A +F +++ I P+ TF+ LL C+H+GLV+EG+ F M
Sbjct: 531 WTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMK 590
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L P EHY C+VDLLGR L+EA++++KSM EP VW ALL CR+H ++
Sbjct: 591 CEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIG 650
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L+ L+ N GNYVL+SN+++A+ +W D ++R M G+ K GCSW+EV
Sbjct: 651 EVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNK 710
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H FL D HP +KIY KL ++ KLK G+V T VL ++ EEEK L HSE+
Sbjct: 711 IHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSER 770
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GL+ TA IR+ KNLRVCGDCH L+S+ RE+IVRD +RFH F +G CS
Sbjct: 771 LAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCS 830
Query: 600 CKDFW 604
C DFW
Sbjct: 831 CGDFW 835
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 233/451 (51%), Gaps = 12/451 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+VSN A+E Y MR+ G ++TFP +LKAC D G H L +K G
Sbjct: 29 MMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYG 88
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN-VVSWTAIISGYINEGNLEEAINMF 119
D FV SL+ LY C + A K+FD + +N VVSW +IIS Y G EA+ +F
Sbjct: 89 CDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLF 148
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L G+ ++++ L AC + IH + ++G+ +V+VA +LV +Y +
Sbjct: 149 SEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRF 208
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G M +A +F + KDIV+W+SM+ G+ NG EAL+ FY++Q +LKP+ +++ ++
Sbjct: 209 GKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISII 268
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A LG L G ++ +N F SN ++G TLIDMYAKC M+ + F M KD +
Sbjct: 269 VASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLI 328
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W +G + N A + QL+ G+ + +L C + + ++
Sbjct: 329 SWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYT 388
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK-TD 418
R P++++ ++D+ G G +D A + +S+ + + + W ++++ C +H +
Sbjct: 389 IRGGLSDPVLQN--TIIDVYGECGIIDYAVRIFESIECK-DVVSWTSMIS-CYVHNGLAN 444
Query: 419 LAEHVLNQL--IALEPWNSGNYVLLSNIYSA 447
A V + + LEP +YV L +I SA
Sbjct: 445 KALEVFSSMKETGLEP----DYVTLVSILSA 471
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 183/373 (49%), Gaps = 34/373 (9%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG + DA +FD + ++++ +W A++ GY++ G A+ M+R + H G+ DS++
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM- 192
+L AC + DL IHG + G VFV SLV LYAKC ++ AR++FD+M
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
D+VSW+S+I Y+ NG EAL +F M + + YT L AC ++LG+
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ + ++ + + + L+ MY + G+M +A +F ++ KD V WN++++G NG
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF---------------N 357
A F L+ ++P+ + + ++ G + G++ N
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLD---------------EAHELIKSMPMEP--- 399
++ +++ + + G DL+ + +A EL++ + ME
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360
Query: 400 NAIVWGALLAGCR 412
+A + G++L CR
Sbjct: 361 DATMIGSILLACR 373
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/521 (42%), Positives = 332/521 (63%), Gaps = 3/521 (0%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MIRG + F IEFY M++ G P NFT+PFV ACA G +HS ++K+
Sbjct: 96 MIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKS 155
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL D V+ SL+ +Y CG L A +VFD+I +K++VSW ++ISGY G +A+ +F
Sbjct: 156 GLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLF 215
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G +PD ++V +L AC LGDL WI G+V E N FV ++L+ +Y KC
Sbjct: 216 GEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKC 275
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ ARRVFD+M +KD+V+W++MI GYA NG EA+ +F M+ + P+ T+VGVL
Sbjct: 276 GDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVL 335
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACAS+GAL+ G W ++ ++ + T LIDMYAKCG + A +VF +M K++V
Sbjct: 336 SACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEV 395
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCG--IQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
WNA++S L+ +G + + +F ++ K G ++PN +F+G+L C HAGLVDEGRQ F+
Sbjct: 396 SWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFD 455
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
MS F L P IEH+ CMVDLL R+G + EA + I+ MP +P+ +V GALL C+ +
Sbjct: 456 LMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNV 515
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
D++E V++ L+ +EP NSGNY++ S I++ +W+D+A++R +M +G+ K GCSW+E+
Sbjct: 516 DVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEI 575
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTD 518
+ VHEF GD H +S+ + ++ L ++K G+ P D
Sbjct: 576 ENQVHEFHAGDVLHFISQDMCQVINLLNEEMKVEGYGPKVD 616
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/636 (36%), Positives = 380/636 (59%), Gaps = 33/636 (5%)
Query: 1 MIRGFVSNDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+ D + A++ F+ +R+E P + T V+ ACA+ D + G + ++ I +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G++ ++ + ++L+++Y+ C + A ++FD+ N+ A+ S Y+ +G EA+ +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G++PD S++ +++C+QL ++ K HGYV G + +L+D+Y KC
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNG-----------FPK-------------- 214
+ A R+FD+M K +V+W+S++ GY NG P+
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 215 ------EALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
EA+++F +MQ +E + + TM+ + SAC LGAL+L W ++E+N +
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 505
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
LGTTL+DM+++CG A +F + ++D W A + ++M G + A +F + +
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++P+G FVG L C+H GLV +G++ F SM ++ ++P HYGCMVDLLGR+G L+E
Sbjct: 566 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 625
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A +LI+ MPMEPN ++W +LLA CR+ ++A + ++ L P +G+YVLLSN+Y++
Sbjct: 626 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 685
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WND AK+R M +KG++K G S +++ G HEF GD SHP I + LDE++ +
Sbjct: 686 AGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
G VP +VL D++E+EK + L+ HSEKLA+A+GLI++ IRI KNLRVC DC
Sbjct: 746 ASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDC 805
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
H K SK+ REII+RDNNRFH +G CSC DF
Sbjct: 806 HSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 199/360 (55%), Gaps = 5/360 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ S+ AI + M N G P +TFPF L ACA+ G++ H LIVK G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV+ SL++ Y CG L A KVFD++ ++NVVSWT++I GY ++A+++F
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 121 RLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R++ + P+S ++V V++AC +L DL T + ++ ++ +G N + ++LVD+Y KC
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A+R+FD+ ++ ++M Y G +EAL +F M ++P+ +M+ +
Sbjct: 285 NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI 344
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
S+C+ L + G ++ RN F S + LIDMY KC R A ++F M +K V
Sbjct: 345 SSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVV 404
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN++V+G NG V A+ F + + N ++ ++ G L +E + F SM
Sbjct: 405 TWNSIVAGYVENGEVDAAWETFETMP----EKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 217/451 (48%), Gaps = 39/451 (8%)
Query: 34 PFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY---LADALKVFDD 90
P LK C + ++ RS + K GLD D T L+ G L+ A +VF++
Sbjct: 36 PSSLKNCKTIDELKMFHRS---LTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 91 IPDKNVV-SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+ ++I GY + G EAI +F R+++ G+ PD ++ L+AC +
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
IHG + + G +++FV SLV YA+CG ++ AR+VFD+M E+++VSW+SMI GYA
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 210 NGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
F K+A+D+F+ M R E + P TMV V+SACA L LE G +F+ + N +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ + L+DMY KC + A ++F E + + NA+ S G + A GVF + G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 329 IQPNGNTFVGLLCGCT-----------HAGLVDEGRQFFNSMS----------------- 360
++P+ + + + C+ H ++ G + ++++
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 361 RVFSL--TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
R+F + + +V +G++D A E ++MP E N + W +++G +
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNIVSWNTIISGLVQGSLFE 451
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
A V + + E N+ ++S + H
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/674 (37%), Positives = 366/674 (54%), Gaps = 70/674 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F +I ++ M + G +P P + K CA F+ G + H + +G
Sbjct: 87 LIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSG 146
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-------------------------- 94
LD D FV+ SL ++Y+ CG + DA KVFD + +K
Sbjct: 147 LDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILS 206
Query: 95 ---------NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
N+VSW I+SG+ G +EA+ MF+++ H G PD ++ VL +
Sbjct: 207 EMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSE 266
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD--------------- 190
+L+ + IHGYV + G ++ V ++++D+Y K G++ ++FD
Sbjct: 267 NLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYIT 326
Query: 191 --------------------QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
Q E ++VSW+S+I G A NG EAL++F MQ +KP
Sbjct: 327 GLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
T+ +L AC ++ AL G F R L + +G+ LIDMYAKCGR+ + VF
Sbjct: 387 NRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVF 446
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M K+ V WN++++G SM+G K +F L + ++P+ +F LL C GL D
Sbjct: 447 NMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
EG ++FN MS + + P +EHY CMV+LLGR+G+L EA++LIK +P EP++ VWGALL
Sbjct: 507 EGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNS 566
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CRL DLAE +L LEP N G YVL+SNIY+A W + IR+ M G++K
Sbjct: 567 CRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNP 626
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
GCSW++V V+ L D SHP ++I K+DE++ +++ +G P D L D+EE+E++
Sbjct: 627 GCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQE 686
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L HSEKLA+ FGL+ T +++ KNLR+CGDCH IK IS GREI +RD NRF
Sbjct: 687 QMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRF 746
Query: 591 HCFIEGSCSCKDFW 604
H F +G CSC DFW
Sbjct: 747 HHFKDGICSCGDFW 760
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 186/450 (41%), Gaps = 74/450 (16%)
Query: 50 VRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINE 109
++H+ I+K+G D ++ L+ Y + DA + IPD V S++++I
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKA 94
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
++I +F R+ GL PD+ + + C +L K IH +G + FV
Sbjct: 95 KLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQ 154
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKD--------------------------------- 196
SL +Y +CG M AR+VFD+M EKD
Sbjct: 155 GSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIE 214
Query: 197 --IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
IVSW+ ++ G+ +G+ KEA+ MF M P+ T+ VL + L +G
Sbjct: 215 PNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQI 274
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
++ + L + + + ++DMY K G + K+F E + + V NA ++GLS NG V
Sbjct: 275 HGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLV 334
Query: 315 KVAFGVFG-----------------------------------QLEKCGIQPNGNTFVGL 339
A +FG +++ G++PN T +
Sbjct: 335 DKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSM 394
Query: 340 LCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPME 398
L C + + GR RV L + H G ++D+ + G++ + + MP +
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDDV--HVGSALIDMYAKCGRIKMSQIVFNMMPTK 452
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
N + W +L+ G +H K + L+
Sbjct: 453 -NLVCWNSLMNGYSMHGKAKEVMSIFESLM 481
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/596 (38%), Positives = 348/596 (58%), Gaps = 13/596 (2%)
Query: 9 DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK 68
D + + + M+ EG +P FT+P +LK C LG + H+ ++K G + +V
Sbjct: 417 DNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS 476
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+ L+++Y G L ALK+F + + +VVSWTA+I+GY EA+N+F+ + +G+K
Sbjct: 477 SVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIK 536
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
D+ ++AC + L + IH +G ++ + +LV LYA+CG + +A
Sbjct: 537 SDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAA 596
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FDQ+ KD VSW+S++ G+A +G+ +EAL++F M + L+ +T +SA A++ +
Sbjct: 597 FDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANV 656
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+G + + + S + LI +YAKCG + D + WN++++G
Sbjct: 657 RIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI-------------DDISWNSMITGY 703
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
S +G A +F +++ + PN TFVG+L C+H GLVDEG +F SMS +L P
Sbjct: 704 SQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPK 763
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
EHY C+VDLLGRSG L A ++ MP++P+A+VW LL+ C +HK D+ E + L+
Sbjct: 764 PEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLL 823
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
LEP +S YVL+SN+Y+ S KW+ + R MM D+G++K G SWVEVD VH F GD
Sbjct: 824 ELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGD 883
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
+HP ++ IY L L + G+VP + +L D E +K HSE+LA+AFGL++
Sbjct: 884 QNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLS 943
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ + KNLRVC DCH IK +SKIT R IIVRD+ RFH F GSCSCKD+W
Sbjct: 944 LTSSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 199/414 (48%), Gaps = 30/414 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G A+ + M + P T +L ACA G + HS +KAG
Sbjct: 323 LISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAG 382
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D V+ SLL+LYV C + A + F + G ++ NL ++ +F
Sbjct: 383 MTSDIVVEGSLLDLYVKCSDIKTAHEFF-------------LCYGQLD--NLNKSFQIFT 427
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ P+ F+ +L CT LG + IH V + G NV+V++ L+D+YAK G
Sbjct: 428 QMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHG 487
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A ++F ++ E D+VSW++MI GY + EAL++F MQ + +K + +S
Sbjct: 488 KLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAIS 547
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA + AL+ G + + + + +G L+ +YA+CG++ +A F ++ KD V
Sbjct: 548 ACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVS 607
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++VSG + +GY + A +F Q+ K G++ N TF + + V G+Q + M
Sbjct: 608 WNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQ-IHGMI 666
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R E ++ L + G +D+ I W +++ G H
Sbjct: 667 RKTGYDSETEVSNALITLYAKCGTIDD--------------ISWNSMITGYSQH 706
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 197/397 (49%), Gaps = 34/397 (8%)
Query: 33 FPFVLKACAREH-DFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
F VL+ C+ F+ + H+ + +G + F+ L++LY G+L+ A KVF+++
Sbjct: 166 FAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENL 225
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
++ VSW A+ISG G EEA+ +F ++ VL+ACT++ K
Sbjct: 226 KARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGK 271
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+HG V + G +V +LV LY++ GN+ A ++F M ++D VS++S+I G A G
Sbjct: 272 QLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQG 331
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
+ AL +F M + KP+ T+ +LSACAS+GAL G S+ + S+ V+
Sbjct: 332 YINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEG 391
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
+L+D+Y KC + A + F D + +F +F Q++ GI P
Sbjct: 392 SLLDLYVKCSDIKTAHEFFLCYGQLDN---------------LNKSFQIFTQMQIEGIVP 436
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
N T+ +L CT G D G Q + + F + ++D+ + G+LD A +
Sbjct: 437 NQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS--SVLIDMYAKHGKLDHALK 494
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ + + E + + W A++AG H K A ++ ++
Sbjct: 495 IFRRLK-ENDVVSWTAMIAGYTQHDKFTEALNLFKEM 530
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 168/319 (52%), Gaps = 15/319 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ +D F A+ + M+++G N F + ACA G + H+ +G
Sbjct: 510 MIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSG 569
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + +L++LY CG + +A FD I K+ VSW +++SG+ G EEA+N+F
Sbjct: 570 YSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFA 629
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ GL+ +SF+ ++A + ++ K IHG + + G V+ +L+ LYAKCG
Sbjct: 630 QMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCG 689
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ D +SW+SMI GY+ +G EAL +F +M++ ++ P + T VGVLS
Sbjct: 690 TI-------------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLS 736
Query: 241 ACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ +G ++ G+ + S E + + P ++D+ + G +++A + EM D
Sbjct: 737 ACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDA 796
Query: 299 VVWNAVVSGLSMNGYVKVA 317
+VW ++S +++ + +
Sbjct: 797 MVWRTLLSACNVHKNIDIG 815
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 212/467 (45%), Gaps = 59/467 (12%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
I + + M G + TF ++L+ C F G++ L++
Sbjct: 65 GIGYLHLMEQHGVRANSQTFLWLLEGCLNSRSFYDGLK-------------------LID 105
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
Y+ G L A+ VFD++P +++ W I + +I E + +FRR+L + ++ D
Sbjct: 106 FYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERI 165
Query: 134 IVRVLTACTQLGDLSTAKW---IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
VL C+ G+ + ++ IH +G + F+ L+DLY K G + A++VF+
Sbjct: 166 FAVVLRGCS--GNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFE 223
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+ +D VSW +MI G + NG+ +EA+ +F + VLSAC + E
Sbjct: 224 NLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEF 269
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + + F S + L+ +Y++ G ++ A ++F M +D+V +N+++SGL+
Sbjct: 270 GKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQ 329
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
GY+ A +F ++ +P+ T LL C G + G+Q F+S + +T I
Sbjct: 330 QGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQ-FHSYAIKAGMTSDIV 388
Query: 371 HYGCMVDLLGRSGQLDEAHE----------------LIKSMPME---PNAIVWGALLAGC 411
G ++DL + + AHE + M +E PN + ++L C
Sbjct: 389 VEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTC 448
Query: 412 RLHKKTDLAEHVLNQLIALE-PWNSGNYVLLSNIYSASHKWNDAAKI 457
TDL E + Q++ +N +L ++Y+ K + A KI
Sbjct: 449 TTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKI 495
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/604 (37%), Positives = 355/604 (58%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ F D + + M+ +G +P FT+P +L+ C LG + H+ ++K G
Sbjct: 386 MLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTG 445
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +V + L+++Y G L A + + + +VVSWTA+ISGY EA+ F+
Sbjct: 446 FQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFK 505
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L+RG++ D+ ++AC + L+ + IH +G ++ + +LV LYA+CG
Sbjct: 506 EMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCG 565
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++A F+++ KD +SW+ +I G+A +G+ ++AL +F M R L+ ++T +S
Sbjct: 566 RIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVS 625
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A++ ++ G + + + F S+ + LI YAKCG + A + F EM +K+ V
Sbjct: 626 AAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVS 685
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+++G S +GY A +F ++++ G PN TFVG+L C+H GLV +G +F SMS
Sbjct: 686 WNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMS 745
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L P HY C+VDL+ R+G L A + I+ MP+EP+A +W LL+ C +HK ++
Sbjct: 746 KEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVG 805
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E L+ LEP +S YVLLSN+Y+ S KW+ + R MM ++G++K G SW+EV
Sbjct: 806 EFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNS 865
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F VGD HPL++KIY L EL K G+ +L D+E+E+K + HSEKL
Sbjct: 866 VHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKL 925
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+ FGL++ + I + KNLRVC DCH IK +SKI+ R IIVRD RFH F G CSC
Sbjct: 926 AITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSC 985
Query: 601 KDFW 604
KD+W
Sbjct: 986 KDYW 989
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 221/420 (52%), Gaps = 13/420 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS----HSLI 56
+I GF+ ++ ++ M E PT +F VL+AC+ ++G+R H+ I
Sbjct: 82 IISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGH---RIGIRYAEQIHARI 138
Query: 57 VKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
+ GL C + L+ LY G + A KVFD++ K+ VSW A+ISG+ G EEAI
Sbjct: 139 ICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAI 198
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
++F + G+ P + VL+ CT++ + +H V + G +V +LV LY
Sbjct: 199 HLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLY 258
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
++ N A +VF +M KD VS++S+I G A GF AL++F M+R+ LKP+ T+
Sbjct: 259 SRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVA 318
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
+LSACAS GAL G S++ + S+ ++ L+D+Y C + A ++F + +
Sbjct: 319 SLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTE 378
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ V+WN ++ + +F +F Q++ G+ PN T+ +L CT G +D G Q
Sbjct: 379 NVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIH 438
Query: 357 NSMSRVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++V Y C ++D+ + G+LD AH +++++ E + + W AL++G H
Sbjct: 439 ---TQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT-EDDVVSWTALISGYAQH 494
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 205/410 (50%), Gaps = 2/410 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF N + AI + M G PT + F VL C + F +G + H+L+ K G
Sbjct: 184 MISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYG 243
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +V +L+ LY A KVF + K+ VS+ ++ISG +G + A+ +F
Sbjct: 244 SSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFT 303
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ LKPD ++ +L+AC G L + +H YV +AG ++ V +L+DLY C
Sbjct: 304 KMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCS 363
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A +F +++V W+ M+ + E+ +F MQ + L P +T +L
Sbjct: 364 DIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILR 423
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C S+GAL+LG + + + F N + + LIDMYAK G++ A + R + + D V
Sbjct: 424 TCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVS 483
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++SG + + A F ++ GIQ + F + C +++GRQ ++ S
Sbjct: 484 WTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQ-IHAQS 542
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
V + + +V L R G++ EA+ + + + ++I W L++G
Sbjct: 543 YVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAK-DSISWNGLISG 591
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 195/392 (49%), Gaps = 5/392 (1%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M + G T+ ++L C + H I+K G + + L+++Y G
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
L +KVF+D+P+++V SW IISG++ + +++F ++ + P S VL A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 141 CT--QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
C+ ++G + A+ IH + G + ++ L+ LYAK G + AR+VFD + KD V
Sbjct: 121 CSGHRIG-IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSV 179
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
SW +MI G++ NG+ +EA+ +F M + P Y VLS C + ++G + +
Sbjct: 180 SWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALV 239
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ + L+ +Y++ A KVF +M+ KD+V +N+++SGL+ G+ A
Sbjct: 240 FKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGAL 299
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
+F ++++ ++P+ T LL C G + +G Q + + + + MI G ++DL
Sbjct: 300 ELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVE-GALLDL 358
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ AHE+ + E N ++W +L
Sbjct: 359 YVNCSDIKTAHEMFLTAQTE-NVVLWNVMLVA 389
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/602 (38%), Positives = 356/602 (59%), Gaps = 1/602 (0%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLD 62
RG CF + + M G + + AC G + H+ ++ A
Sbjct: 15 RGLALQRCFVAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYR 74
Query: 63 CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL 122
F+ T L+ +YV CG L DA V D +P+++VVSWT +ISGY EA+++F ++
Sbjct: 75 PAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKM 134
Query: 123 LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
L G P+ +++ VLT+C+ + K +H + + ++FV +SL+D+YAK N+
Sbjct: 135 LRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENI 194
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
++ARRVFD +PE+D+VS +++I GYA G +EALD+F + E ++ + T +++A
Sbjct: 195 QEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTAL 254
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
+ L +L+ G + + R E L +LIDMY+KCG++ + +VF M ++ V WN
Sbjct: 255 SGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWN 314
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
A++ G +G +F L K ++P+ T + +L GC+H GLVDEG F+++ +
Sbjct: 315 AMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKE 373
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
S HYGC++DLLGRSG+L++A LI++MP E +WG+LL CR+H + E
Sbjct: 374 QSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGEL 433
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
V +L+ +EP N+GNYV+LSNIY+A+ W D K+R +M +K + K G SW+ +D V+H
Sbjct: 434 VAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIH 493
Query: 483 EFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
F + HP + I +K+ E+ +KAAGFVP VL D+++E+K+ L HSEKLA+
Sbjct: 494 TFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAI 553
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
FGL+ T P IR+ KNLR+C DCH K +SK+ REI +RD NRFH G+C+C D
Sbjct: 554 TFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGD 613
Query: 603 FW 604
+W
Sbjct: 614 YW 615
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 184/340 (54%), Gaps = 5/340 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A++ + M G +P +T VL +C+ G + HSL+VK
Sbjct: 114 MISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN 173
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +SLL++Y + +A +VFD +P+++VVS TAIISGY +G EEA+++FR
Sbjct: 174 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 233
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G++ + + ++TA + L L K +H + V + SL+D+Y+KCG
Sbjct: 234 QLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCG 293
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +RRVFD M E+ +VSW++M+ GY +G E + +F ++ +E +KP+ T++ VLS
Sbjct: 294 KLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLS 352
Query: 241 ACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKD 297
C+ G ++ G ++ + E++ L G +ID+ + GR+ +A + M +
Sbjct: 353 GCSHGGLVDEGLDIFDTVVKEQSALLHTGHYG-CIIDLLGRSGRLEKALNLIENMPFEST 411
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
+W +++ ++ V V V +L + + GN +
Sbjct: 412 PSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVI 451
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/596 (38%), Positives = 355/596 (59%)
Query: 9 DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK 68
D + + + M+ EG P FT+P +L+ C+ LG + H+ ++K G + +V
Sbjct: 452 DNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVS 511
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+ L+++Y G L ALK+F + +K+VVSWTA+I+GY EA+N+F+ + +G+
Sbjct: 512 SVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIH 571
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
D+ ++AC + L+ + IH +G ++ V +LV LYA+CG + A
Sbjct: 572 SDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFA 631
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD++ KD +SW+S+I G+A +G +EAL +F M + + +T +SA A++ +
Sbjct: 632 FDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANV 691
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+LG + + + S + LI +YAKCG + A + F EM +K+++ WNA+++G
Sbjct: 692 KLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGY 751
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
S +G+ A +F +++ G+ PN TFVG+L C+H GLVDEG ++F SM V L P
Sbjct: 752 SQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPK 811
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
EHY C+VDLLGRSG L A ++ MP++P+A+V LL+ C +HK D+ E + L+
Sbjct: 812 PEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLL 871
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
LEP +S YVLLSN+Y+ + KW + R MM D+G++K G SW+EV+ VH F GD
Sbjct: 872 ELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGD 931
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
HP +KIY L +L G++P T+ +L D E +K HSEKLA+AFGL++
Sbjct: 932 QKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLS 991
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ I + KNLRVCGDCH IK +SKI+ R I+VRD+ RFH F G CSCKD+W
Sbjct: 992 LSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 216/410 (52%), Gaps = 2/410 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G + C + A+ + M G PT + F VL AC + +++G + H L++K G
Sbjct: 242 MLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQG 301
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +V +L+ LY G A +VF+ + ++ VS+ ++ISG +G ++A+ +F+
Sbjct: 302 FSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFK 361
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ LKPD ++ +L+AC+ +G L K H Y +AG ++ + +L+DLY KC
Sbjct: 362 KMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCS 421
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A F +++V W+ M+ Y E+ +F MQ E ++P +T +L
Sbjct: 422 DIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILR 481
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C+SL A++LG + + + F N + + LIDMYAK G++ A K+FR +K+KD V
Sbjct: 482 TCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVS 541
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A+++G + + A +F +++ GI + F + C +++G+Q ++ +
Sbjct: 542 WTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQ-IHAQA 600
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
V + + +V L R G++ +A+ + + N I W +L++G
Sbjct: 601 CVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDN-ISWNSLISG 649
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 217/418 (51%), Gaps = 5/418 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKA 59
++ FV+ + + M E P T+ VL+ C + F + H+ +
Sbjct: 140 VLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITH 199
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G + FV L++LY G+L A KVFD + ++ VSW A++SG G EEA+ +F
Sbjct: 200 GYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLF 259
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G+ P + VL+ACT++ + +HG V + G +V +LV LY++
Sbjct: 260 CQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRL 319
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN A +VF+ M ++D VS++S+I G + G+ +AL++F M + LKP+ T+ +L
Sbjct: 320 GNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLL 379
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SAC+S+GAL +G S+ + S+ +L L+D+Y KC + A + F + ++ V
Sbjct: 380 SACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVV 439
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+WN ++ + + +F +F Q++ GI+PN T+ +L C+ VD G Q +
Sbjct: 440 LWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQV 499
Query: 360 SRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+ F + ++D+ + G+LD A ++ + + E + + W A++AG H+K
Sbjct: 500 LKTGFQFNVYVS--SVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGYAQHEK 554
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 229/495 (46%), Gaps = 13/495 (2%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
+ I F + M G + T+ ++L C F G + H I+K G + + L+
Sbjct: 51 NGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLM 110
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
+LY+ G L A+ VFD++P + + W ++ ++ + +FRR+L +KPD
Sbjct: 111 DLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDER 170
Query: 133 SIVRVLTACTQLGDLS--TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ VL C GD+ + IH G ++FV L+DLY K G + A++VFD
Sbjct: 171 TYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFD 229
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+ ++D VSW +M+ G + +G +EA+ +F M + P Y VLSAC + ++
Sbjct: 230 GLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKV 289
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + + F + L+ +Y++ G A +VF M +D+V +N+++SGLS
Sbjct: 290 GEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQ 349
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
GY A +F ++ ++P+ T LL C+ G + G+Q F+S + ++ I
Sbjct: 350 QGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ-FHSYAIKAGMSSDII 408
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI-- 428
G ++DL + + AHE S E N ++W +L L + + + Q+
Sbjct: 409 LEGALLDLYVKCSDIKTAHEFFLSTETE-NVVLWNVMLVAYGLLDNLNESFKIFTQMQME 467
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
+EP N Y + S+ + +I + + G Q S V +D +G
Sbjct: 468 GIEP-NQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAK---LGK 523
Query: 489 NSHPLSEKIYSKLDE 503
H L KI+ +L E
Sbjct: 524 LDHAL--KIFRRLKE 536
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 163/294 (55%), Gaps = 1/294 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ ++ F A+ + M+++G N F + ACA G + H+ +G
Sbjct: 545 MIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSG 604
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V +L++LY CG + DA FD I K+ +SW ++ISG+ G+ EEA+++F
Sbjct: 605 YSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFS 664
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G + +SF+ ++A + ++ K IH + + G V+ L+ LYAKCG
Sbjct: 665 QMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCG 724
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N++ A R F +MPEK+ +SW++M+ GY+ +G +AL +F +M++ + P + T VGVLS
Sbjct: 725 NIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLS 784
Query: 241 ACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
AC+ +G ++ G+ + S E + + P ++D+ + G +++A + EM
Sbjct: 785 ACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEM 838
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 157/338 (46%), Gaps = 21/338 (6%)
Query: 100 TAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE 159
TA+ Y N+ IN + RG++ +S + + +L C G S +HG + +
Sbjct: 37 TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96
Query: 160 AGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDM 219
G V + L+DLY G+++ A VFD+MP + + W+ ++ + + L +
Sbjct: 97 MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156
Query: 220 FYNMQRENLKPEYYTMVGVLSACASLGALEL----GVWASSFM---ERNEFLSNPVLGTT 272
F M +E +KP+ T GVL C G + + A + E + F+ NP
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNP----- 210
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
LID+Y K G + A KVF ++ +D V W A++SGLS +G + A +F Q+ G+ P
Sbjct: 211 LIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPT 270
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFN-SMSRVFSLTPMIEHYGC--MVDLLGRSGQLDEAH 389
F +L CT G Q + + FSL E Y C +V L R G A
Sbjct: 271 PYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSL----ETYVCNALVTLYSRLGNFIPAE 326
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
++ +M ++ + + + +L++G +D A + ++
Sbjct: 327 QVFNAM-LQRDEVSYNSLISGLSQQGYSDKALELFKKM 363
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/594 (41%), Positives = 353/594 (59%), Gaps = 45/594 (7%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ V+AG+D D+ V L Y G L A+ + PD V +T+ I + + G
Sbjct: 50 HAAAVRAGVDQDKAVDFRLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLH 109
Query: 113 EEAINMFRR-LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
A+ + LL GL P + ++ L AC G L+ + +HGY + +VAT+
Sbjct: 110 HAALALLSEMLLSHGLLPTAHTLSASLPAC---GGLAVGRALHGYAVKLALSGEPYVATA 166
Query: 172 LVDLY--------------------------------AKCGNMEKARRVFDQMPEKDIVS 199
L+ +Y AK G ++ AR +FD +P KD++
Sbjct: 167 LLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLIC 226
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W++M+ GY +G P EAL +F M R ++P+ ++V LSA A LG E G W SF+
Sbjct: 227 WNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVT 286
Query: 260 RNEFLS---NPVLGTTLIDMYAKCGRMAQACKVFREMK--DKDQVVWNAVVSGLSMNGYV 314
+ N +GT LIDMY KCG + A VF ++ D+D V WNA+V+G +M+G+
Sbjct: 287 NSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHS 346
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
+ A FGQL G+ P TF+G+L C+H+GLVDEGR+ F SM+ + + P +EHYGC
Sbjct: 347 REALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGC 406
Query: 375 MVDLLGRSGQLDEAHELIKSMP-MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
MVDLLGR+G+++EA EL++SM +P+A++W +LLA CRLHK +L + + + L+A
Sbjct: 407 MVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAACRLHKNMELGQRIADHLVANGLA 466
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPL 493
NSG YVLLSN+Y+A+ W + ++R+MM GIQK GCS VEV V EF+ GD SHP
Sbjct: 467 NSGTYVLLSNMYAAAGNWREVGRVRAMMRASGIQKEPGCSAVEVGRRVVEFVAGDRSHPR 526
Query: 494 SEKIYSKLDELATKLKAAGFVPTTD---HVLFDIEEEEKQYFLACHSEKLALAFGLITTA 550
+ +IY+KL+E+ +A G VP T+ H L D + K+ LA HSEKLALAFGLI+T
Sbjct: 527 AAEIYAKLEEVNGMARARGHVPRTELVLHDLDDDDTAAKEQALAVHSEKLALAFGLISTP 586
Query: 551 PKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P I+I KNLR C DCH +KL+S++TGR+I+ RD NRFH F++GSC+C D+W
Sbjct: 587 PGTAIKIVKNLRACADCHAVLKLVSEVTGRKIVFRDRNRFHHFVDGSCTCGDYW 640
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 8/212 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ + A+ + M G P + L A A+ + G HS + +
Sbjct: 230 MMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSS 289
Query: 61 ---LDCDEFVKTSLLNLYVHCGYLADALKVFDDI--PDKNVVSWTAIISGYINEGNLEEA 115
+ + V T+L+++Y CG L DA+ VF D+ D+++V+W A+++GY G+ EA
Sbjct: 290 SRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREA 349
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI-HGYVNEAGKGRNVFVATSLVD 174
+ F +L +GL P + + VL AC+ G + + + E G V +VD
Sbjct: 350 LAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVD 409
Query: 175 LYAKCGNMEKARRVFDQM--PEKDIVSWSSMI 204
L + G +E+A + M + D V W+S++
Sbjct: 410 LLGRAGRVEEAFELVQSMTRTKPDAVMWASLL 441
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/605 (39%), Positives = 350/605 (57%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I G+ F+ E M+ E + N T VL AC+ EH H +
Sbjct: 371 IIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRH 430
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G DE V + + Y C L A +VF + K V SW A+I + G +++++F
Sbjct: 431 GFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLF 490
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G+ PD F+I +L AC +L L K IHG++ G + F+ SL+ LY +C
Sbjct: 491 LVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQC 550
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+M + +FD+M K +V W+ MI G++ N P EALD F M +KP+ + GVL
Sbjct: 551 SSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVL 610
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+ + AL LG SF + + + LIDMYAKCG M Q+ +F + +KD+
Sbjct: 611 GACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEA 670
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
VWN +++G ++G+ A +F ++ G +P+ TF+G+L C HAGLV EG ++ M
Sbjct: 671 VWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQM 730
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
++ + P +EHY C+VD+LGR+GQL EA +L+ MP EP++ +W +LL+ CR + ++
Sbjct: 731 QNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEI 790
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E V +L+ LEP + NYVLLSN+Y+ KW++ K+R M + G+ K GCSW+E+ G
Sbjct: 791 GEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGG 850
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+V+ FLV D S S+KI +L K+ G+ P T VL ++EEE K L HSEK
Sbjct: 851 MVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEK 910
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA++FGL+ TA +R+ KNLR+C DCH AIKL+SK+ R+IIVRDN RFH F G C+
Sbjct: 911 LAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCT 970
Query: 600 CKDFW 604
C DFW
Sbjct: 971 CGDFW 975
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 188/366 (51%), Gaps = 5/366 (1%)
Query: 1 MIRGFVSNDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ N F+ AI F + P NFT P V KACA D +LG H+L +KA
Sbjct: 165 LLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKA 224
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D FV +L+ +Y CG++ A+KVF+ + ++N+VSW +++ G E +F
Sbjct: 225 GGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVF 284
Query: 120 RRLL---HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+RLL GL PD ++V V+ AC +G++ +HG + G V V SLVD+Y
Sbjct: 285 KRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMY 344
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTM 235
+KCG + +AR +FD K++VSW+++I GY+ G + ++ MQR E ++ T+
Sbjct: 345 SKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTV 404
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+ VL AC+ L + R+ FL + ++ + YAKC + A +VF M+
Sbjct: 405 LNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEG 464
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
K WNA++ + NG+ + +F + G+ P+ T LL C + G++
Sbjct: 465 KTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEI 524
Query: 356 FNSMSR 361
M R
Sbjct: 525 HGFMLR 530
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 167/316 (52%), Gaps = 6/316 (1%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKA-GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD 93
+L+AC + +G + H+L+ + L D + T ++ +Y CG +D+ VFD +
Sbjct: 97 ILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKE 156
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKW 152
K++ + A++SGY +AI++F LL L PD+F++ V AC + D+ +
Sbjct: 157 KDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEA 216
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+H +AG + FV +L+ +Y KCG +E A +VF+ M +++VSW+S++ + NG
Sbjct: 217 VHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGG 276
Query: 213 PKEALDMFYNM---QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
E +F + + E L P+ TMV V+ ACA++G + +G+ + +
Sbjct: 277 FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTV 336
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK-CG 328
+L+DMY+KCG + +A +F K+ V WN ++ G S G + F + ++++
Sbjct: 337 NNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEK 396
Query: 329 IQPNGNTFVGLLCGCT 344
++ N T + +L C+
Sbjct: 397 VRVNEVTVLNVLPACS 412
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 155/312 (49%), Gaps = 11/312 (3%)
Query: 108 NEGNLEEAINMFRRLLHRGLKPDS----FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG 163
+ GNL +A+N+ G S +I +L AC ++ + +H V+ + K
Sbjct: 65 DSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKL 124
Query: 164 RN-VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
RN V ++T ++ +Y+ CG+ +R VFD EKD+ +++++ GY+ N ++A+ +F
Sbjct: 125 RNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLE 184
Query: 223 -MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
+ +L P+ +T+ V ACA + +ELG + + S+ +G LI MY KCG
Sbjct: 185 LLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCG 244
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL---EKCGIQPNGNTFVG 338
+ A KVF M++++ V WN+V+ S NG GVF +L E+ G+ P+ T V
Sbjct: 245 FVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVT 304
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
++ C G V G + ++ +T + +VD+ + G L EA L M
Sbjct: 305 VIPACAAVGEVRMG-MVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALF-DMNGG 362
Query: 399 PNAIVWGALLAG 410
N + W ++ G
Sbjct: 363 KNVVSWNTIIWG 374
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/536 (41%), Positives = 345/536 (64%), Gaps = 8/536 (1%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+++ Y G + +A ++FD+ P ++V +WTA++SGYI +EEA +F ++ R
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER--- 310
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
+ S +L Q + AK + + RNV +++ YA+CG + +A+ +
Sbjct: 311 -NEVSWNAMLAGYVQGERMEMAKELFDVM----PCRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD+MP++D VSW++MI GY+ +G EAL +F M+RE + + LS CA + AL
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL 425
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
ELG + + + + +G L+ MY KCG + +A +F+EM KD V WN +++G
Sbjct: 426 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
S +G+ +VA F +++ G++P+ T V +L C+H GLVD+GRQ+F +M++ + + P
Sbjct: 486 SRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+HY CMVDLLGR+G L++AH L+K+MP EP+A +WG LL R+H T+LAE +++
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 605
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
A+EP NSG YVLLSN+Y++S +W D K+R M DKG++K+ G SW+E+ H F VGD
Sbjct: 606 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 665
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
HP ++I++ L+EL ++K AG+V T VL D+EEEEK+ + HSE+LA+A+G++
Sbjct: 666 EFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMR 725
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ IR+ KNLRVC DCH AIK +++ITGR II+RDNNRFH F +GSCSC D+W
Sbjct: 726 VSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 199/428 (46%), Gaps = 54/428 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G++ N F+ A + ++ M + N ++K R + LG +
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNV----MIKGYVRNRN--LGKARELFEIMPE 154
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + ++L+ Y G + DA VFD +P+KN VSW A++S Y+ +EEA +F+
Sbjct: 155 RDVCSW--NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK 212
Query: 121 RLLHRGLKPDSFSIVR---VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+++++V +L + + A+ +N R+V +++ YA
Sbjct: 213 -------SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNV----RDVVSWNTIITGYA 261
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
+ G +++AR++FD+ P +D+ +W++M+ GY N +EA ++F M N
Sbjct: 262 QSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE--------- 312
Query: 238 VLSACASLGALELGVWASSFMERNEFL------SNPVLGTTLIDMYAKCGRMAQACKVFR 291
S A+ G ME + L N T+I YA+CG++++A +F
Sbjct: 313 -----VSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFD 367
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
+M +D V W A+++G S +G+ A +F Q+E+ G + N ++F L C ++
Sbjct: 368 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 427
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVD-----LLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
G+Q + + T GC V + + G ++EA++L K M + + + W
Sbjct: 428 GKQLHGRLVKGGYET------GCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNT 480
Query: 407 LLAGCRLH 414
++AG H
Sbjct: 481 MIAGYSRH 488
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 163/344 (47%), Gaps = 36/344 (10%)
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
++ Y+ G +AL+VF +P + VS+ +ISGY+ G E A +F + R D
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DL 126
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
S ++ + +L A+ + + E R+V +++ YA+ G ++ AR VFD+
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPE----RDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
MPEK+ VSW++++ Y N +EA +F + REN ++S LG
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKS--RENW--------ALVSWNCLLGGF--- 229
Query: 252 VWASSFMERNEF-----LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
V +E +F + + V T+I YA+ G++ +A ++F E +D W A+VS
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G N V+ A +F ++ + N ++ +L G ++ ++ F+ M
Sbjct: 290 GYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMP-----C 340
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + M+ + G++ EA L MP + + + W A++AG
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 5/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A+ + M EG +F L CA +LG + H +VK G
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +LL +Y CG + +A +F ++ K++VSW +I+GY G E A+ F
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ GLKPD ++V VL+AC+ G + + + + + G N +VDL +
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
G +E A + MP E D W +++ +G + A D + M+ EN
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN 611
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ Y + G +A RVF +MP VS++ MI GY NG + A +F M +L +
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL-VSW 129
Query: 233 YTMVGVLSACASLG-ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
M+ +LG A EL M + S T++ YA+ G + A VF
Sbjct: 130 NVMIKGYVRNRNLGKAREL----FEIMPERDVCS----WNTMLSGYAQNGCVDDARSVFD 181
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
M +K+ V WNA++S N ++ A +F E + ++ LL G + E
Sbjct: 182 RMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVE 237
Query: 352 GRQFFNSMS--RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
RQFF+SM+ V S +I Y +SG++DEA +L P++ + W A+++
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGY-------AQSGKIDEARQLFDESPVQ-DVFTWTAMVS 289
Query: 410 GCRLHKKTDLAEHVLNQL 427
G ++ + A + +++
Sbjct: 290 GYIQNRMVEEARELFDKM 307
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/605 (39%), Positives = 362/605 (59%), Gaps = 3/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + CFQ A+ + M+ P T VL ACAR + G H +++
Sbjct: 273 MISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRA 332
Query: 61 LDCD-EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+D + +F+ +L+ LY G L D KVF+ I +K ++SW +IS + G EEA+ +F
Sbjct: 333 MDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLF 392
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ +GL PDS+S+ L+AC + IHGY+ + G N FV +L+D+YAKC
Sbjct: 393 VQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGN-FNDFVQNALIDMYAKC 451
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + A ++F+++ EK +V+W+SMI G++ NG+ EA+ +F M +K + T + V+
Sbjct: 452 GFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVI 511
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+ LG LE G W + + L T L DMY+KCG + A VF M ++ V
Sbjct: 512 QACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIV 571
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W+ +++G M+G + +F Q+ GI+PN TF+ +L C+HAG V+EG+ +FNSM
Sbjct: 572 SWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM 631
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
S F + P +H+ CMVDLL R+G L+ A+++I S+P N+ +WGALL GCR+HK+ D+
Sbjct: 632 SE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDI 690
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ + L+ ++ ++G Y LLSNIY+ W+ K+RSMM KG++K+ G S +E+D
Sbjct: 691 IKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDK 750
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
++ F GD SH ++ IY L+ + + A + D+ + + K+ + HSEK
Sbjct: 751 KIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEK 810
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFG+I T P +RI+KNLRVC DCH K+ SKITGREII+RD NRFHCF GSCS
Sbjct: 811 LAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCS 870
Query: 600 CKDFW 604
C D+W
Sbjct: 871 CNDYW 875
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 220/414 (53%), Gaps = 9/414 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I+ +V F+ A+ Y+ M + +NF FP VLKAC+ D +G + H ++K
Sbjct: 70 LIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKC 129
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G + D V+TSLL +Y L DA K FD +P ++VV+W++I+ ++ G E ++MF
Sbjct: 130 GFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMF 189
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+++ ++PDS +++ V AC++LG L + +HGYV N + SL+ +Y K
Sbjct: 190 SQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKL 249
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ A R+F+ +P + W+ MI Y +G +EAL++F MQ ++P TMVGVL
Sbjct: 250 GDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVL 309
Query: 240 SACASLGALELGVWASSFMERNEFLSNP---VLGTTLIDMYAKCGRMAQACKVFREMKDK 296
ACA LG ++ G F+ R +P LG L+++YA G + KVF +K+K
Sbjct: 310 CACARLGRVKEGRSVHGFVIRRAM--DPELDFLGPALMELYADTGNLRDCHKVFETIKEK 367
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ WN ++S + NG + A +F Q++ G+ P+ + L C G Q
Sbjct: 368 TILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIH 427
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + + +++ ++D+ + G + A+++ + + E + + W +++ G
Sbjct: 428 GYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKMFEKIK-EKSLVTWNSMICG 478
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 186/359 (51%), Gaps = 4/359 (1%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ + GL T L+ Y G + +VFD P + W +I Y+ G
Sbjct: 21 HAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFF 80
Query: 113 EEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
EEA++++ ++++ + +F VL AC+ GDLS +HG V + G + V TS
Sbjct: 81 EEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETS 140
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
L+ +Y + ++ A + FD MP +D+V+WSS++ + NG E LDMF M E ++P+
Sbjct: 141 LLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPD 200
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
TM+ V AC+ LG+L LG ++ R E SN L +LI MY K G + A ++F
Sbjct: 201 SVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFE 260
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
+ + W ++S + +G + A VF ++++ ++PN T VG+LC C G V E
Sbjct: 261 NVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKE 320
Query: 352 GRQFFNSMSRVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
GR + R ++ P ++ G +++L +G L + H++ +++ E + W L++
Sbjct: 321 GRSVHGFVIRR-AMDPELDFLGPALMELYADTGNLRDCHKVFETIK-EKTILSWNTLIS 377
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 129/298 (43%), Gaps = 34/298 (11%)
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+T +H ++ G R+ +T L++ YA+ G E ++RVFD P+ D W +I+ Y
Sbjct: 15 TTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCY 74
Query: 208 ASNGFPKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
GF +EA+ +++ M ++ + + VL AC+ G L +G + + F S+
Sbjct: 75 VWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESD 134
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
V+ T+L+ MY + + ACK F M +D V W+++V NG +F Q+
Sbjct: 135 AVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMIS 194
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQ----------------------FFNSMSRVFS 364
++P+ T + + C+ G + GR + + ++S
Sbjct: 195 EAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYS 254
Query: 365 LTPMIEHYGC--------MVDLLGRSGQLDEAHELIKSM---PMEPNAIVWGALLAGC 411
+ E+ C M+ +SG EA + M MEPN + +L C
Sbjct: 255 AERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCAC 312
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/604 (38%), Positives = 360/604 (59%), Gaps = 2/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ ++ +I+ + M N+ F P T +L+AC D + G H ++ +G
Sbjct: 288 MICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG 346
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+CD L+N+Y CG L + +VF + K+ VSW ++I+ YI G+ +EA+ +F+
Sbjct: 347 YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK 406
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ +KPDS + V +L+ TQLGDL K +H + + G N+ V+ +LVD+YAKCG
Sbjct: 407 -MMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCG 465
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
M + +VF+ M +DI++W+++I + L M M+ E + P+ TM+ +L
Sbjct: 466 EMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILP 525
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C+ L A G + + S+ +G LI+MY+KCG + + +VF+ MK KD V
Sbjct: 526 VCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVT 585
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++S M G K A FG++E GI P+ FV ++ C+H+GLV+EG +F+ M
Sbjct: 586 WTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMK 645
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + P IEHY C+VDLL RS LD+A + I SMP++P++ +WGALL+ CR+ T++A
Sbjct: 646 KDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIA 705
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V ++I L P ++G YVL+SNIY+A KW+ IR + +G++K GCSW+E+
Sbjct: 706 ERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNK 765
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V+ F G E++ L LA + G++ VL DI+E+EK+ L HSE+L
Sbjct: 766 VYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERL 825
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL+ T P +++ KNLRVC DCH K ISKI RE++VRD NRFH F +G+CSC
Sbjct: 826 AIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSC 885
Query: 601 KDFW 604
D+W
Sbjct: 886 GDYW 889
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 228/427 (53%), Gaps = 4/427 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR N F A+ Y+ + P +TFP V+ ACA DF++ H ++ G
Sbjct: 86 IIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMG 145
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D ++ +L+++Y L A KVF+++P ++VVSW ++ISGY G EA+ ++
Sbjct: 146 FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYY 205
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R + G+ PDS+++ VL AC LG + IHG + + G ++V V L+ +Y K
Sbjct: 206 RFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFN 265
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ RR+FD+M +D VSW++MI GY+ G +E++ +F M + KP+ T+ +L
Sbjct: 266 GLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQ 324
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC LG LE G + +M + + + LI+MYAKCG + + +VF MK KD V
Sbjct: 325 ACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS 384
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++++ NG A +F ++ K ++P+ T+V LL T G + G++ ++
Sbjct: 385 WNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLA 443
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++ I +VD+ + G++ ++ ++ ++M + I W ++A C + +L
Sbjct: 444 KM-GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASCVHSEDCNLG 501
Query: 421 EHVLNQL 427
+++++
Sbjct: 502 LRMISRM 508
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 193/394 (48%), Gaps = 31/394 (7%)
Query: 36 VLKACAREHDFQLGVRS-------------HSLIVKAGLDCDEFVKTSLLNLYVHCGYLA 82
VL C+R+ F R+ HSLI+ GL L+ Y H
Sbjct: 6 VLHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPT 65
Query: 83 DALKVFD-DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
+ VF P NV W +II + G EA++++ L+PD+++ V+ AC
Sbjct: 66 SSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC 125
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
L D AK IH V + G G ++++ +L+D+Y + +++KAR+VF++MP +D+VSW+
Sbjct: 126 AGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWN 185
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
S+I GY +NG+ EAL+++Y + + P+ YTM VL AC LG++E G +E+
Sbjct: 186 SLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKI 245
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ ++ L+ MY K + ++F +M +D V WN ++ G S G + + +F
Sbjct: 246 GIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF 305
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC------- 374
++ +P+ T +L C H G ++ G+ + M + Y C
Sbjct: 306 MEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYM--------ITSGYECDTTASNI 356
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
++++ + G L + E+ M + +++ W +++
Sbjct: 357 LINMYAKCGNLLASQEVFSGMKCK-DSVSWNSMI 389
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/669 (37%), Positives = 371/669 (55%), Gaps = 77/669 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHD-FQLGVRSHSLIV 57
++ + N A+ F+ +M RNE T C R D QL R V
Sbjct: 402 ILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIA---AFAQCGRLDDAIQLYERVPEQTV 458
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
KT+++ Y G + A +FD+I + NVV+W AII+GY G L+EA +
Sbjct: 459 AT--------KTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKD 510
Query: 118 MFRRL------------------------------LHR-GLKPDSFSIVRVLTACTQLGD 146
+F+++ LHR G P S L+AC +GD
Sbjct: 511 LFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGD 570
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK---------------------- 184
+ + IH + G N +V L+ +YAKCGN+E
Sbjct: 571 VEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISG 630
Query: 185 ---------ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
AR VF++MP++D+VSW+++I Y G + ALD+F +M +KP T+
Sbjct: 631 LSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTV 690
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+LSAC +LGA++LG + + + F + +G +LI MY KCG C VF EM +
Sbjct: 691 TSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYEDGFC-VFEEMPE 749
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
D + WNAV+ G + NG K A +F Q+E GI P+ +F+G+LC C+HAGLVDEG
Sbjct: 750 HDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAH 809
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
FNSM++ + + P++ HY CMVDLLGR+G L EA LI++MP++P++++W ALL CR+H+
Sbjct: 810 FNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHR 869
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
+L + V +L + S YVLLSN++++ W+ A+IR +M D+G+ K G SW+
Sbjct: 870 NVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWI 929
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
+V +H F+ GD +H E+IYS L E +A G++P T+ VL D+EEE+KQ L
Sbjct: 930 QVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLY 989
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+ FG+++T I+I KNLR+CGDCH +K +SK+T R+II+RD NRFH F +
Sbjct: 990 HSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRD 1049
Query: 596 GSCSCKDFW 604
GSCSC D+W
Sbjct: 1050 GSCSCGDYW 1058
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 203/442 (45%), Gaps = 42/442 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V + A + + M P F VL A D +L + +K G
Sbjct: 332 MISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTG 391
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D V +++LN Y G L A+ F+ +P++N SWT +I+ + G L++AI ++
Sbjct: 392 YEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYE 451
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ + + + ++TA Q+G + A+ I + NV +++ Y + G
Sbjct: 452 RVPEQTVATKT----AMMTAYAQVGRIQKARLIFDEILNP----NVVAWNAIIAGYTQNG 503
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++A+ +F +MP K+ SW++MI G+ N +EAL++ + R P + LS
Sbjct: 504 MLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALS 563
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA++G +E+G S + N + LI MYAKCG + VFR ++ KD V
Sbjct: 564 ACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVS 623
Query: 301 WNAVVSGLSMN-------------------------------GYVKVAFGVFGQLEKCGI 329
WN+++SGLS N G+ +VA +F + GI
Sbjct: 624 WNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGI 683
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+PN T LL C + G + G Q F+++ + ++ + + G ++
Sbjct: 684 KPNQLTVTSLLSACGNLGAIKLGEQ-FHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGF 741
Query: 390 ELIKSMPMEPNAIVWGALLAGC 411
+ + MP E + I W A+L GC
Sbjct: 742 CVFEEMP-EHDLITWNAVLVGC 762
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 175/358 (48%), Gaps = 18/358 (5%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
S++N Y G + +A +FD KN+ +WT +++GY EG +EEA +F + R +
Sbjct: 207 SMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNV-- 264
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
S +++ Q GDL A+ + + E +NV S+V Y C M +AR +F
Sbjct: 265 --VSWNAMISGYVQNGDLKNARKLFDEMPE----KNVASWNSVVTGYCHCYRMSEARELF 318
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
DQMPE++ VSW MI GY EA D+F M R +P+ V VLSA L LE
Sbjct: 319 DQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLE 378
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
L + + + V+G+ +++ Y + G + A F M ++++ W +++ +
Sbjct: 379 LIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFA 438
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
G + A ++ ++ + + T ++ G + + R F+ + L P +
Sbjct: 439 QCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEI-----LNPNV 489
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ ++ ++G L EA +L + MP++ N+ W A++AG ++++ A +L +L
Sbjct: 490 VAWNAIIAGYTQNGMLKEAKDLFQKMPVK-NSASWAAMIAGFVQNEESREALELLIEL 546
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 184/362 (50%), Gaps = 18/362 (4%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
S++ Y HC +++A ++FD +P++N VSW +ISGY++ + EA ++F ++ +P
Sbjct: 300 SVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARP 359
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
D V VL+A T L DL + + G +V V +++++ Y + G+++ A F
Sbjct: 360 DQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFF 419
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
+ MPE++ SW++MI +A G +A+ ++ + + + T +++A A +G ++
Sbjct: 420 ETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQ 475
Query: 250 LGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+ + +E L+ N V +I Y + G + +A +F++M K+ W A+++G
Sbjct: 476 -----KARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGF 530
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV---FSL 365
N + A + +L + G P+ ++F L C + G V+ GR + + F+
Sbjct: 531 VQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNS 590
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
M ++ + + G +++ + +++ ++ + + W +L++G + D A V
Sbjct: 591 YVM----NGLISMYAKCGNVEDGSHVFRTIRVK-DTVSWNSLISGLSENYMLDDARVVFE 645
Query: 426 QL 427
++
Sbjct: 646 KM 647
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 165/392 (42%), Gaps = 79/392 (20%)
Query: 114 EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI-------------HGYVNEA 160
E +N RR R S ++ LT+ ++L + A+W+ G N+
Sbjct: 107 EKLNNTRRRYSRVYSLYSHDSLKHLTSQSKL-NTRHARWMDYLQQFKFVIRHKSGAKNKE 165
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
++F + + + G +E+ARRVF++M ++D+VSW+SMI GY+ NG EA +F
Sbjct: 166 TPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF 225
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWA-SSFMERNEFLSNPVLGTTLIDMYAK 279
+N++ T +L+ A G +E S ERN N +I Y +
Sbjct: 226 DAFVGKNIR----TWTILLTGYAKEGRIEEAREVFESMTERNVVSWN-----AMISGYVQ 276
Query: 280 CGRMAQACKVFREMKDKDQVVWNAVVSG--------------------------LSMNGY 313
G + A K+F EM +K+ WN+VV+G + ++GY
Sbjct: 277 NGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGY 336
Query: 314 VKV-----AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
V + A+ VF ++ + +P+ + FV +L T GL D + + SL P+
Sbjct: 337 VHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT--GLDD--------LELIGSLRPI 386
Query: 369 IEHYG---------CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC----RLHK 415
G +++ R+G LD A ++MP E N W ++A RL
Sbjct: 387 AIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMP-ERNEYSWTTMIAAFAQCGRLDD 445
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
L E V Q +A + Y + I A
Sbjct: 446 AIQLYERVPEQTVATKTAMMTAYAQVGRIQKA 477
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/580 (38%), Positives = 352/580 (60%), Gaps = 2/580 (0%)
Query: 26 FLPTNFTF-PFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA 84
++P + F +LK C G H+ I+++ D + +LLN+Y CG L +A
Sbjct: 55 YIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEA 114
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
KVF+ +P ++ V+WT +ISGY +A+ F ++L G P+ F++ V+ A
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
+HG+ + G NV V ++L+DLY + G M+ A+ VFD + ++ VSW+++I
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G+A ++AL++F M R+ +P +++ + AC+S G LE G W ++M ++
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
G TL+DMYAK G + A K+F + +D V WN++++ + +G+ K A F ++
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ GI+PN +F+ +L C+H+GL+DEG ++ M + + P HY +VDLLGR+G
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGD 413
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
L+ A I+ MP+EP A +W ALL CR+HK T+L + + L+P + G +V+L NI
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 473
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y++ +WNDAA++R M + G++K CSWVE++ +H F+ D HP E+I K +E+
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEV 533
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
K+K G+VP T HV+ ++++E++ L HSEK+ALAF L+ T P I I KN+RVC
Sbjct: 534 LAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVC 593
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
GDCH AIKL SK+ GREIIVRD NRFH F +G+CSCKD+W
Sbjct: 594 GDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 174/312 (55%), Gaps = 1/312 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ +D A+ F+N M G+ P FT V+KA A E G + H VK G
Sbjct: 132 LISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 191
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V ++LL+LY G + DA VFD + +N VSW A+I+G+ E+A+ +F+
Sbjct: 192 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQ 251
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G +P FS + AC+ G L KW+H Y+ ++G+ F +L+D+YAK G
Sbjct: 252 GMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG 311
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR++FD++ ++D+VSW+S++ YA +GF KEA+ F M+R ++P + + VL+
Sbjct: 312 SIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLT 371
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQV 299
AC+ G L+ G M+++ + T++D+ + G + +A + EM +
Sbjct: 372 ACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA 431
Query: 300 VWNAVVSGLSMN 311
+W A+++ M+
Sbjct: 432 IWKALLNACRMH 443
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/605 (38%), Positives = 352/605 (58%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + A+ + M+N G PT FTF VL A D LG + HS ++K
Sbjct: 221 MITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTN 280
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +LL+ Y + DA K+FD++P+++ VS+ IISGY +G + A ++FR
Sbjct: 281 FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFR 340
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L F +L+ + D + IH + V SLVD+YAKCG
Sbjct: 341 ELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCG 400
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
E+A +F + + V W++MI Y GF +E L +F M++ ++ + T +L
Sbjct: 401 KFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLR 460
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A AS+ +L LG SF+ ++ F+SN G+ L+D+YAKCG + A + F+EM D++ V
Sbjct: 461 ASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVS 520
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++S + NG + F ++ G+QP+ +F+G+L C+H+GLV+EG FNSM+
Sbjct: 521 WNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMT 580
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+++ L P EHY +VD+L RSG+ +EA +L+ MP++P+ I+W ++L CR+HK +LA
Sbjct: 581 QIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELA 640
Query: 421 EHVLNQLIALEPW-NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+QL +E ++ YV +SNIY+A+ +W + +K+ M D+G++K+ SWVE+
Sbjct: 641 RRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKH 700
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
H F D HP E+I K+D L ++ G+ P T L + +E+ K L HSE+
Sbjct: 701 ETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSER 760
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AF LI+T I + KNLR C DCH AIK+ISKI GREI VRD+ RFH F +G CS
Sbjct: 761 LAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCS 820
Query: 600 CKDFW 604
C DFW
Sbjct: 821 CGDFW 825
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 212/418 (50%), Gaps = 18/418 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + F+ A E + M+ G P TF +L C + + I+K G
Sbjct: 120 LIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLG 179
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V +L++ Y L A ++F ++P+ + VS+ A+I+GY +G E+A+N+F
Sbjct: 180 YDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFV 239
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + GLKP F+ VL A L D+ + IH +V + NVFV+ +L+D Y+K
Sbjct: 240 EMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHD 299
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR++FD+MPE+D VS++ +I GYA +G K A D+F +Q + + +LS
Sbjct: 300 SVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLS 359
Query: 241 ACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
++ E+G + A + + + S ++G +L+DMYAKCG+ +A +F + +
Sbjct: 360 IASNTLDWEMGRQIHAQTIVTTAD--SEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSA 417
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN- 357
V W A++S G+ + +F ++ + + + TF LL + G+Q +
Sbjct: 418 VPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSF 477
Query: 358 -----SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
MS VFS + ++ D+ + G + +A + + MP + N + W A+++
Sbjct: 478 IIKSGFMSNVFSGSALL-------DVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMISA 527
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 181/342 (52%), Gaps = 6/342 (1%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
+++ YV G L +A K+FD + ++ V+WT +I GY +EA +F ++ G +PD
Sbjct: 89 MISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPD 148
Query: 131 SFSIVRVLTACT--QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
+ V +L+ C ++G+ T + + + G + V +LVD Y K ++ A ++
Sbjct: 149 YVTFVTLLSGCNGHEMGNQITQ--VQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQL 206
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F +MPE D VS+++MI GY+ +G ++A+++F MQ LKP +T VL A L +
Sbjct: 207 FKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDI 266
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
LG SF+ + F+ N + L+D Y+K + A K+F EM ++D V +N ++SG
Sbjct: 267 VLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGY 326
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+ +G K AF +F +L+ F +L ++ + GRQ ++ + V +
Sbjct: 327 AWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQ-IHAQTIVTTADSE 385
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
I +VD+ + G+ +EA E+I + +A+ W A+++
Sbjct: 386 ILVGNSLVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMISA 426
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 151/298 (50%), Gaps = 14/298 (4%)
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
N+ R++ G PD+ + + G+LS A+ + E +N ++ Y
Sbjct: 38 NIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLF----EKMPHKNTVSTNMMISGY 93
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
K GN+ +AR++FD M E+ V+W+ +I GY+ KEA ++F MQR +P+Y T V
Sbjct: 94 VKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFV 153
Query: 237 GVLSACASLGALELG---VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
+LS C E+G + + + + S ++G TL+D Y K R+ AC++F+EM
Sbjct: 154 TLLSGC---NGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEM 210
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
+ D V +NA+++G S +G + A +F +++ G++P TF +LC + G+
Sbjct: 211 PEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQ 270
Query: 354 QFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
Q + + + F + + ++D + + +A +L MP E + + + +++G
Sbjct: 271 QIHSFVIKTNFVWNVFVSN--ALLDFYSKHDSVIDARKLFDEMP-EQDGVSYNVIISG 325
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/519 (44%), Positives = 332/519 (63%), Gaps = 5/519 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH--RGLKPDSFSIVRVLTAC 141
A +F + N+ + A + + AI F + PD F+ VL AC
Sbjct: 43 AALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKAC 102
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM--PEKDIVS 199
L + + IH V + G N+FV SL+D+Y K G + AR +FD+M ++++V
Sbjct: 103 AGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVC 162
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
W++MI GYA N +A+++F MQ+ + P T+V VL ACA LGAL+LG W F+
Sbjct: 163 WNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFI 222
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
R E LG L DMYAKCG + +A +VF +M+++D + W+ ++ GL+M G+ AF
Sbjct: 223 SRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAF 282
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
G F ++ CG +PN F+GLL CTHAGLV +G FN+M + + ++P +EHYGC+VDL
Sbjct: 283 GCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDL 342
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNY 438
L R+G+LD+A ++I SMPM+PN I+WGALL GCR+++ + + V+ ++ L+ +SG+Y
Sbjct: 343 LSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSY 402
Query: 439 VLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIY 498
V L+N+YS+ + +DAAK R M + G+ K GCSW+EVD VHEF +GD SHP S KIY
Sbjct: 403 VYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIY 462
Query: 499 SKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIA 558
S + EL K+K AG+ P TD V+ I+EEEK+ L+ HSEKLA+AFGLI+T+ IR+
Sbjct: 463 SMIRELMWKMKLAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRVV 522
Query: 559 KNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
KNLR+C DCH+A K+IS I REIIVRD +RFH F +G+
Sbjct: 523 KNLRICNDCHDAAKIISGIVKREIIVRDRSRFHHFKDGA 561
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 171/313 (54%), Gaps = 7/313 (2%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPT--NFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ N + HAI+F+N + P FTF VLKACA G + H+++ K
Sbjct: 62 LKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQ 121
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDD--IPDKNVVSWTAIISGYINEGNLEEAIN 117
G + + FV+ SL+++Y GYL A +FD+ + D+NVV W A+I+GY +AI
Sbjct: 122 GFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIE 181
Query: 118 MFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+FR + G+ P+ ++V VL AC LG L KWI G+++ +F+ +L D+Y
Sbjct: 182 VFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALADMY 241
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
AKCG + +ARRVF++M E+D++SWS +I G A G EA FY M KP +
Sbjct: 242 AKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFM 301
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGT-TLIDMYAKCGRMAQACKVFREMKD 295
G+L+AC G ++ G+ + M++ +S V ++D+ ++ G + +A + M
Sbjct: 302 GLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPM 361
Query: 296 KDQV-VWNAVVSG 307
K V +W A++ G
Sbjct: 362 KPNVIIWGALLGG 374
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 10/273 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+ N+ + AIE + M+ G +P + T VL ACA LG I +
Sbjct: 166 MIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRR 225
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ F+ +L ++Y CG + +A +VF+ + +++V+SW+ II G G+ +EA F
Sbjct: 226 EMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCF 285
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+L G KP+ + +LTACT G + + E G V +VDL ++
Sbjct: 286 YEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSR 345
Query: 179 CGNMEKARRVFDQMPEK-DIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPEYYT 234
G ++KA + MP K +++ W +++ G Y +G + + + ++ Y
Sbjct: 346 AGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDH-SGSYVY 404
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+ V S S+G L+ M N L P
Sbjct: 405 LANVYS---SMGRLDDAAKCRLRMRENGVLKTP 434
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/568 (39%), Positives = 344/568 (60%), Gaps = 1/568 (0%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
+ AC G + H+ +VKA ++ T L+ LYV CG L DA V D +P++NV
Sbjct: 48 ITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNV 107
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
VSWTA+ISGY G EA+ +F R+L G K + F++ VLT+C + + +H
Sbjct: 108 VSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSL 167
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
V + ++FV +SL+D+Y K GN+++AR+VFD +PE+D VS +++I GYA G EA
Sbjct: 168 VVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEA 227
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
LD+F + ++ Y T +L++ + L +L G + R E VL +LIDM
Sbjct: 228 LDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDM 287
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
Y+KCG++ + +VF M + + WNA++ G +G + +F + + ++P+ T
Sbjct: 288 YSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDSVTL 346
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
+ +L GC+H GLVDEG F+ + + + I HYGC++DLLGRSGQL +A +LI+ MP
Sbjct: 347 LAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMP 406
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAK 456
EP +WG+LL CR+H + E V +L+ +EP N+GNYV+LSNIY+A+ W D +
Sbjct: 407 FEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFR 466
Query: 457 IRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
+R +M + + K SW+ +D V+H F + HP + I +K+ E+ +KAAGFVP
Sbjct: 467 VRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPD 526
Query: 517 TDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISK 576
VL D+++E+K+ L HSEKLA+ FGL+ T P I++ KNLR+C DCH K +SK
Sbjct: 527 LSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSK 586
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ GREI +RD NRFH +G+C+C D+W
Sbjct: 587 VYGREISLRDKNRFHLLKDGACTCGDYW 614
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 172/320 (53%), Gaps = 5/320 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A+E + M G FT VL +C Q + HSL+VK
Sbjct: 113 MISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTN 172
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +SLL++Y G + +A KVFD +P+++ VS TAIISGY G +EA+++FR
Sbjct: 173 FESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFR 232
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G++ + + +LT+ + L L+ K +HG + + + SL+D+Y+KCG
Sbjct: 233 QLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCG 292
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +RRVFD MP++ +SW++M+ GY +G +E + +F M E +KP+ T++ VLS
Sbjct: 293 KLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMT-EEVKPDSVTLLAVLS 351
Query: 241 ACASLGALE--LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKD 297
C+ G ++ L ++ E+N + G +ID+ + G++ +A + M +
Sbjct: 352 GCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYG-CVIDLLGRSGQLQKALDLIEHMPFEPT 410
Query: 298 QVVWNAVVSGLSMNGYVKVA 317
+W +++ ++ V V
Sbjct: 411 PAIWGSLLGACRVHINVSVG 430
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/552 (41%), Positives = 344/552 (62%), Gaps = 4/552 (0%)
Query: 57 VKAGLDCDEFVKTSLLN---LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE 113
+K L D V T L+N L Y+ A +FD I DK+++ + + GY +
Sbjct: 53 IKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPY 112
Query: 114 EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLV 173
A ++F LL GL PD ++ +L AC L +H + + G N+++ +L+
Sbjct: 113 LAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLI 172
Query: 174 DLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
++YA+C +M AR VFD+M + IVS++++I GYA + P EAL +F +Q N++P
Sbjct: 173 NMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDV 232
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
TM+ V+ +CA LGAL+LG W ++++ F + T LIDM+AKCG + A +F M
Sbjct: 233 TMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM 292
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
+ +D W+A++ + +G A +F ++++ G++P+ TF+GLL C+HAGLV++GR
Sbjct: 293 RVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGR 352
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+F SMS+ + +TP I+HYGCMVDLLGR+G LDEA+ + + ++ I+W LL+ C
Sbjct: 353 GYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACST 412
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
H ++A+ V+ ++ L+ + G+YV+LSN+Y+ +W D +R +M D+G+ K+ GCS
Sbjct: 413 HGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCS 472
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLF-DIEEEEKQYF 532
VEV+ VVHEF GD H +S ++ LDEL ++K G+VP T V D+EEE K+
Sbjct: 473 SVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELV 532
Query: 533 LACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
L HSEKLA+AFGL+ T P IR+AKNLR+CGDCH A KLIS I GR+I++RD RFH
Sbjct: 533 LRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHR 592
Query: 593 FIEGSCSCKDFW 604
F +G CSC DFW
Sbjct: 593 FEDGKCSCGDFW 604
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 177/319 (55%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG+ ++ A + + G LP ++TF +LKACA + G+ H VK G
Sbjct: 101 MARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLG 160
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + ++ +L+N+Y C + A VFD++ +VS+ AII+GY EA+++FR
Sbjct: 161 LNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFR 220
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L ++P +++ V+ +C LG L KWIH YV + G + V V T+L+D++AKCG
Sbjct: 221 ELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCG 280
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +F+ M +D +WS+MI +A++G +A+ MF M+RE ++P+ T +G+L
Sbjct: 281 SLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLY 340
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGT-TLIDMYAKCGRMAQACKVFREMKDK-DQ 298
AC+ G +E G M + ++ + ++D+ + G + +A +++ K
Sbjct: 341 ACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATP 400
Query: 299 VVWNAVVSGLSMNGYVKVA 317
++W ++S S +G V++A
Sbjct: 401 ILWRTLLSACSTHGNVEMA 419
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/591 (39%), Positives = 356/591 (60%), Gaps = 18/591 (3%)
Query: 30 NFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFD 89
N P +L+ + H+ + H+ ++ GL + + LLN A +F+
Sbjct: 3 NLNHP-ILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFAS-TYAFTIFN 60
Query: 90 DIPDKNVVSWTAIISGYINEGN-LEEAINMFRRLL-HRGLKPDSFSIVRVLTACTQLGDL 147
IP+ + + +IS + + + A +++ +L H+ L+P+SF+ + AC L
Sbjct: 61 HIPNPTLFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWL 120
Query: 148 STAKWIHGYVNE-AGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
+H +V + + FV SL++ YAK G + +R +FDQ+ E D+ +W++M+
Sbjct: 121 QHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAA 180
Query: 207 YASNG-------------FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
YA + EAL +F +MQ +KP T+V ++SAC++LGAL G W
Sbjct: 181 YAQSASHVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAW 240
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
A ++ RN N +GT L+DMY+KCG + AC++F E+ D+D +NA++ G +++G+
Sbjct: 241 AHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGH 300
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
A ++ ++ + P+G T V + C+H GLV+EG + F SM V + P +EHYG
Sbjct: 301 GNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYG 360
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
C++DLLGR+G+L EA E ++ MPM+PNAI+W +LL +LH ++ E L LI LEP
Sbjct: 361 CLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPE 420
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPL 493
SGNYVLLSN+Y++ +WND ++R +M D G+ K+ G S VE++G +HEFL GD +HP
Sbjct: 421 TSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKAHPF 480
Query: 494 SEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKD 553
S++IYSK+ E+ +L G P T VLFD+EEE+K+ FL+ HSE+LA+AF LI ++
Sbjct: 481 SKEIYSKIGEINRRLLEYGHKPRTSEVLFDVEEEDKEDFLSYHSERLAIAFALIASSSSM 540
Query: 554 VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI KNLRVCGDCH KLIS R+IIVRD NRFH F +GSCSC D+W
Sbjct: 541 PIRIIKNLRVCGDCHAITKLISAAYQRDIIVRDRNRFHHFKDGSCSCLDYW 591
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 180/345 (52%), Gaps = 19/345 (5%)
Query: 8 NDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVK-AGLDCDE 65
+D A YN + L P +FTFP + KACA Q G H+ ++K D
Sbjct: 81 SDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHVLKFLQPPYDP 140
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE------------ 113
FV+ SLLN Y G L + +FD I + ++ +W +++ Y +
Sbjct: 141 FVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDADMS 200
Query: 114 -EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
EA+++F + +KP+ ++V +++AC+ LG LS W HGYV N FV T+L
Sbjct: 201 LEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTAL 260
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
VD+Y+KCG + A ++FD++ ++D +++MI G+A +G +AL+++ NM+ E+L P+
Sbjct: 261 VDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDG 320
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVF 290
T+V + AC+ G +E G+ M+ + P L LID+ + GR+ +A +
Sbjct: 321 ATIVVTMFACSHGGLVEEGLEIFESMKGVHGME-PKLEHYGCLIDLLGRAGRLKEAEERL 379
Query: 291 REMKDK-DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
++M K + ++W +++ ++G +++ L + + +GN
Sbjct: 380 QDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGN 424
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 4 GFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC 63
F D A+ + M+ P T ++ AC+ G +H +++ L
Sbjct: 193 SFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKL 252
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
+ FV T+L+++Y CG L A ++FD++ D++ + A+I G+ G+ +A+ ++R +
Sbjct: 253 NRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMK 312
Query: 124 HRGLKPDSFSIVRVLTACTQ-------LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
L PD +IV + AC+ L + K +HG + L+DL
Sbjct: 313 LEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEH------YGCLIDLL 366
Query: 177 AKCGNMEKARRVFDQMPEK-DIVSWSSMI 204
+ G +++A MP K + + W S++
Sbjct: 367 GRAGRLKEAEERLQDMPMKPNAILWRSLL 395
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF + A+E Y +M+ E +P T + AC SH +V+ G
Sbjct: 291 MIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFAC-----------SHGGLVEEG 339
Query: 61 LDCDEFVK------------TSLLNLYVHCGYLADALKVFDDIPDK-NVVSWTAIISGYI 107
L+ E +K L++L G L +A + D+P K N + W +++
Sbjct: 340 LEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAK 399
Query: 108 NEGNLEEAINMFRRLLHRGLKPDS 131
GNLE + L+ L+P++
Sbjct: 400 LHGNLEMGEAALKHLIE--LEPET 421
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/592 (37%), Positives = 358/592 (60%), Gaps = 1/592 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
++ + + G LP FT VL+AC+ E + +G + H+ +KAG+ D FV T+L+
Sbjct: 382 SLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALI 441
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
++Y G + +A +F + ++ SW A++ G+ N EA+ +F + RG K D
Sbjct: 442 DVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQI 501
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ A L L K IH V + ++FV + ++D+Y KCG M+ AR+VF+Q+
Sbjct: 502 TFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQI 561
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
P D V+W+++I G NG ++AL ++ M+ ++P+ YT ++ AC+ L ALE G
Sbjct: 562 PSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGK 621
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ + + +P + T+L+DMYAKCG + A +FR M + +WNA++ GL+ +G
Sbjct: 622 QIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHG 681
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ A F +++ G+ P+ TF+G+L C+H+GL + + F+SM + + + P IEHY
Sbjct: 682 NAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHY 741
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEP 432
C+VD L R+G + EA +++ SMP E +A ++ LL CR+ + E V +L ++P
Sbjct: 742 SCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDP 801
Query: 433 WNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHP 492
+S YVLLSNIY+A+++W +A R+MM ++K G SW+++ VH F+ GD SH
Sbjct: 802 SDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHE 861
Query: 493 LSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPK 552
++ IY+K++ + ++K G+VP T+ L DIEEE+K+ L+ HSEKLA+A+GL+ T P
Sbjct: 862 ETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPS 921
Query: 553 DVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+R+ KNLRVCGDCH AIK IS + REI++RD NRFH F G CSC D+W
Sbjct: 922 TTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 212/427 (49%), Gaps = 14/427 (3%)
Query: 4 GFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKAGLD 62
G+ + DCF+ I+ +P + T+ +L A + +LG + H +V+ G D
Sbjct: 278 GWEAVDCFRDMIK--------SRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWD 329
Query: 63 CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL 122
V S +N+YV G + A ++F + + +++SW +ISG G E ++ +F L
Sbjct: 330 QFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDL 389
Query: 123 LHRGLKPDSFSIVRVLTACTQLGD-LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
L GL PD F+I VL AC+ L + + +H +AG + FV+T+L+D+Y+K G
Sbjct: 390 LRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGK 449
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
ME+A +F D+ SW++M+ G+ + +EAL +F M K + T A
Sbjct: 450 MEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKA 509
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
L L+ G + + + F + + + ++DMY KCG M A KVF ++ D V W
Sbjct: 510 AGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAW 569
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF-NSMS 360
V+SG NG + A + Q+ G+QP+ TF L+ C+ +++G+Q N M
Sbjct: 570 TTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMK 629
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P + +VD+ + G +++A+ L + M A+ W A++ G H + A
Sbjct: 630 LNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTRSVAL-WNAMIVGLAQHGNAEEA 686
Query: 421 EHVLNQL 427
+ N++
Sbjct: 687 LNFFNEM 693
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 185/400 (46%), Gaps = 40/400 (10%)
Query: 20 SMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCG 79
S+ LP F+ +L+ + D LG R+H++IV +GL+ D +V +L+ +Y CG
Sbjct: 6 SVSPSSLLPQWFS---ILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCG 62
Query: 80 YLADALKVFDDIP--DKNVVSWTAIISGYINEGNLE------EAINMFRRLLHRGLKPDS 131
L A K+FD P D+++V++ AI++ Y + G L EA ++FR L +
Sbjct: 63 SLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTR 122
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++ + C G S ++ + GY + G +VFVA +LV++YAK + +AR +FD+
Sbjct: 123 HTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDR 182
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
MP +D+V W+ M++ Y G E L +F R L+P+ C S+ + +G
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD----------CVSVRTILMG 232
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
V + ER L A A K+F D D VWN +S
Sbjct: 233 VGKKTVFERE--LEQV---------------RAYATKLFVCDDDSDVTVWNKTLSSYLQA 275
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G A F + K + + T++ +L ++ G+Q ++ R F +
Sbjct: 276 GEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVR-FGWDQFVSV 334
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+++ ++G ++ A + M E + I W +++GC
Sbjct: 335 ANSAINMYVKAGSVNYARRMFGQMK-EVDLISWNTVISGC 373
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 168/347 (48%), Gaps = 35/347 (10%)
Query: 82 ADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
A A K+F D +V W +S Y+ G EA++ FR ++ + DS + + +L+
Sbjct: 248 AYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVV 307
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
L L K IHG V G + V VA S +++Y K G++ ARR+F QM E D++SW+
Sbjct: 308 ASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWN 367
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG------------ALE 249
++I G A +G + +L +F ++ R L P+ +T+ VL AC+SL AL+
Sbjct: 368 TVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALK 427
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G+ SF + T LID+Y+K G+M +A +F D WNA++ G +
Sbjct: 428 AGIVLDSF-----------VSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFT 476
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
++ + A +F + + G + + TF + +G+Q + + M
Sbjct: 477 VSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIK------MR 530
Query: 370 EHYGCMV-----DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
HY V D+ + G++ A ++ +P P+ + W +++GC
Sbjct: 531 FHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGC 576
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/616 (38%), Positives = 350/616 (56%), Gaps = 32/616 (5%)
Query: 21 MRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCG 79
+R+E G P+ T V+ + D LG + H I++ G F + L+++Y G
Sbjct: 135 LRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVG 194
Query: 80 YLADALKVFDDIPDKNVV-------------------------------SWTAIISGYIN 108
+ DA +VFD++ KNVV +WT +++G
Sbjct: 195 PIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQ 254
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
G EA+++FRR+ G+ D ++ +LTAC L L K IH Y+ NVFV
Sbjct: 255 NGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFV 314
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
++LVD+Y+KC ++ A VF +M K+I+SW++MI GY NG +EA+ +F MQR+ +
Sbjct: 315 GSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGI 374
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
KP+ +T+ V+S+CA+L +LE G + + L+ +Y KCG + A +
Sbjct: 375 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHR 434
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+F EM DQV W A+V G + G K +F ++ G++P+G TF+G+L C+ +GL
Sbjct: 435 LFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGL 494
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
VD+GR +F+SM + + P+ +HY CM+DL RSG L +A E IK MP P+A W LL
Sbjct: 495 VDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLL 554
Query: 409 AGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQK 468
+ CRL ++ + L+ L+P N +YVLL +++++ +WND AK+R M D+ ++K
Sbjct: 555 SACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKK 614
Query: 469 IRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEE 528
GCSW++ VH F D SHP S IY KL L +K+ G+ P VL D+ + E
Sbjct: 615 EPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAE 674
Query: 529 KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNN 588
K + L+ HSEKLA+AFGLI P+ IRI KNLRVC DCH A K ISKITGR+I+VRD
Sbjct: 675 KVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAV 734
Query: 589 RFHCFIEGSCSCKDFW 604
RFH F G CSC DFW
Sbjct: 735 RFHKFSNGICSCGDFW 750
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 196/394 (49%), Gaps = 39/394 (9%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH--RGL 127
SLL+ G + D ++F +P ++ VS+ A+++G+ G A + LL G+
Sbjct: 82 SLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGV 141
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
+P ++ V+ + LGD + + +H + G G F + LVD+YAK G + ARR
Sbjct: 142 RPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARR 201
Query: 188 VFDQM-------------------------------PEKDIVSWSSMIQGYASNGFPKEA 216
VFD+M E+D ++W++M+ G NG EA
Sbjct: 202 VFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEA 261
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
LD+F M+ E + + YT +L+AC +L ALE G +++ R + N +G+ L+DM
Sbjct: 262 LDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDM 321
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
Y+KC + A VFR M K+ + W A++ G NG + A VF ++++ GI+P+ T
Sbjct: 322 YSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTL 381
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
++ C + ++EG Q F+ ++ V L P + +V L G+ G +++AH L M
Sbjct: 382 GSVISSCANLASLEEGAQ-FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMS 440
Query: 397 MEPNAIVWGALLAGC----RLHKKTDLAEHVLNQ 426
+ + W AL+ G + + DL E +L++
Sbjct: 441 FH-DQVSWTALVMGYAQFGKAKETIDLFEKMLSK 473
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 182/343 (53%), Gaps = 4/343 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G N A++ + MR EG +TF +L AC + G + H+ I +
Sbjct: 248 MVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTC 307
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV ++L+++Y C + A VF + KN++SWTA+I GY G EEA+ +F
Sbjct: 308 YEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFS 367
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+KPD F++ V+++C L L H +G V V+ +LV LY KCG
Sbjct: 368 EMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCG 427
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A R+FD+M D VSW++++ GYA G KE +D+F M + +KP+ T +GVLS
Sbjct: 428 SIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLS 487
Query: 241 ACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM-KDKDQ 298
AC+ G ++ G + S + ++ + T +ID+Y++ G + QA + ++M + D
Sbjct: 488 ACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDA 547
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
W ++S + G +++ L K Q N ++V LLC
Sbjct: 548 FGWATLLSACRLRGDMEIGKWAAENLLKLDPQ-NPASYV-LLC 588
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 142/314 (45%), Gaps = 53/314 (16%)
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
+LTA G L A+ V +A GRN+ SL+ A+ G + R+F +P++D
Sbjct: 52 LLTAYASSGLLPHAR----RVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRD 107
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQREN--LKPEYYTMVGVLSACASLGALELGVWA 254
VS+++++ G++ G A + + R+ ++P TM GV+ ++LG LG
Sbjct: 108 AVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQV 167
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM--------------------- 293
+ R F + G+ L+DMYAK G + A +VF EM
Sbjct: 168 HCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMV 227
Query: 294 ----------KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
+++D + W +V+GL+ NG A VF ++ G+ + TF +L C
Sbjct: 228 AEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTAC 287
Query: 344 THAGLVDEGRQFFNSMSR------VFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMP 396
++EG+Q ++R VF + +++ Y C RS +L EA + + M
Sbjct: 288 GALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKC------RSVRLAEA--VFRRM- 338
Query: 397 MEPNAIVWGALLAG 410
M N I W A++ G
Sbjct: 339 MWKNIISWTAMIVG 352
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/591 (37%), Positives = 349/591 (59%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
+ E + M+ G P FT+P +L+ C +LG + HSL +K G + D +V L++
Sbjct: 330 SFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLID 389
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y G L A K+ + + ++VVSWT++I+GY+ EEA+ F+ + G+ PD+
Sbjct: 390 MYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+ +AC + + IH V +G ++ + +LV+LYA+CG E+A +F ++
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIE 509
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
KD ++W+ +I G+ + K+AL +F M + K +T + +SA A+L ++ G
Sbjct: 510 HKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQ 569
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ S + LI +Y KCG + A +F EM +++V WN +++ S +G
Sbjct: 570 VHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGR 629
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
A +F Q+++ G++PN TF+G+L C+H GLV+EG +F SMS V+ L P+ +HY
Sbjct: 630 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYA 689
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
C+VD+LGR+GQLD A + MP+ NA++W LL+ C++HK ++ E L+ LEP
Sbjct: 690 CVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPH 749
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPL 493
+S +YVLLSN Y+ + KW + ++R MM D+GI+K G SW+EV VH F VGD HPL
Sbjct: 750 DSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPL 809
Query: 494 SEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKD 553
S++IY L EL +L G+ ++ + E+E+K HSEKLA+AFGL+T P
Sbjct: 810 SDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCI 869
Query: 554 VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+R+ KNLRVC DCH +K S++T REI++RD RFH F GSCSC D+W
Sbjct: 870 PLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 218/414 (52%), Gaps = 2/414 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A++ ++ M+ G P T +L ACA D Q G + HS ++KAG+ D + SLL+
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
LYV CG + A +F+ NVV W ++ Y +L ++ +F ++ G+ P+ F+
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFT 348
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+L CT G + + IH + G +++V+ L+D+Y+K G ++KAR++ + +
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE 408
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
++D+VSW+SMI GY + F +EAL F MQ + P+ + SACA + A+ G+
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ 468
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ + + + ++ + TL+++YA+CGR +A +FRE++ KD++ WN ++SG +
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRL 528
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
K A VF ++ + G + N TF+ + + + +G+Q + T E
Sbjct: 529 YKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVAN 587
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
++ L G+ G +++A + M + N + W ++ C H + A + +Q+
Sbjct: 588 ALISLYGKCGSIEDAKMIFSEMSLR-NEVSWNTIITSCSQHGRGLEALDLFDQM 640
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 207/422 (49%), Gaps = 9/422 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ + + A Y+ M +PT + VL AC + F G H+ + K
Sbjct: 115 MLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA 174
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +L+ LY+ G A +VF D+ + V++ +ISG+ G+ E A+ +F
Sbjct: 175 FCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFD 234
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GL+PD ++ +L AC +GDL K +H Y+ +AG + SL+DLY KCG
Sbjct: 235 EMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCG 294
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A +F+ ++V W+ M+ Y ++ ++F MQ + P +T +L
Sbjct: 295 DIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILR 354
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C G +ELG S +N F S+ + LIDMY+K G + +A K+ ++ +D V
Sbjct: 355 TCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVS 414
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++++G + + + A F +++ CG+ P+ +GL + + RQ +
Sbjct: 415 WTSMIAGYVQHDFCEEALATFKEMQDCGVWPDN---IGLASAASACAGIKAMRQGLQIHA 471
Query: 361 RVF--SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG---CRLHK 415
RV+ I + +V+L R G+ +EA L + + + I W L++G RL+K
Sbjct: 472 RVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIE-HKDEITWNGLISGFGQSRLYK 530
Query: 416 KT 417
+
Sbjct: 531 QA 532
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 201/389 (51%), Gaps = 6/389 (1%)
Query: 37 LKAC-AREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
L+AC R + + L + H+ V GL D + L++LY G + A +VF ++ ++
Sbjct: 49 LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRD 108
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
VSW A++SGY G +EA ++ ++ + P + + VL+ACT+ + + IH
Sbjct: 109 HVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHA 168
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
V + FV +L+ LY G+ + A RVF M D V+++++I G+A G +
Sbjct: 169 QVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGEC 228
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL +F MQ L+P+ T+ +L+ACAS+G L+ G S++ + + + +L+D
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y KCG + A +F + V+WN ++ + +F +FGQ++ GI PN T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFT 348
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
+ +L CT G ++ G Q +S+S + G ++D+ + G LD+A ++++ M
Sbjct: 349 YPCILRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILE-M 406
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ + + W +++AG H D E L
Sbjct: 407 LEKRDVVSWTSMIAGYVQH---DFCEEAL 432
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V +D + A+ + M++ G P N ACA + G++ H+ + +G
Sbjct: 418 MIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + +L+NLY CG +A +F +I K+ ++W +ISG+ ++A+ +F
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFM 537
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G K + F+ + ++A L D+ K +HG + G VA +L+ LY KCG
Sbjct: 538 KMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCG 597
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A+ +F +M ++ VSW+++I + +G EALD+F M++E LKP T +GVL+
Sbjct: 598 SIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLA 657
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ +G +E G+ M N + NP+ ++D+ + G++ +A + EM +
Sbjct: 658 ACSHVGLVEEGLSYFKSMS-NVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITAN 716
Query: 298 QVVWNAVVSGLSMNGYVKV 316
++W ++S ++ +++
Sbjct: 717 AMIWRTLLSACKVHKNIEI 735
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/600 (37%), Positives = 359/600 (59%), Gaps = 2/600 (0%)
Query: 6 VSNDCFQHAIEFYNSMRNEGFLPTNFTF-PFVLKACAREHDFQLGVRSHSLIVKAGLDCD 64
+S D +++F ++ ++P + F +LK C G H ++++ D
Sbjct: 26 LSEDSDDESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHD 85
Query: 65 EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
+ +LLN+Y CG L +A KVFD +P+++ V+WT +ISGY +A+ +F ++L
Sbjct: 86 LVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLR 145
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G P+ F++ V+ A +HG+ + G NV V ++L+DLY + G M+
Sbjct: 146 FGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 205
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
A+ VFD + ++ VSW+++I G+A ++AL++F M RE +P +++ + AC+S
Sbjct: 206 AQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSS 265
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
G LE G W ++M ++ G TL+DMYAK G + A K+F + +D V WN++
Sbjct: 266 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 325
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
++ + +G+ A F ++ + GI+PN +F+ +L C+H+GL+DEG ++ M +
Sbjct: 326 LTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-G 384
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ HY +VDLLGR+G L+ A I+ MP+EP A +W ALL CR+HK T+L +
Sbjct: 385 IVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 444
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+ L+P + G +V+L NIY++ +WNDAA++R M + G++K CSWVE++ +H F
Sbjct: 445 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 504
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
+ D HP E+I K +E+ K+K G+VP T HV+ ++++E++ L HSEK+ALAF
Sbjct: 505 VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAF 564
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
L+ T P I I KN+RVCGDCH AIKL SK GREIIVRD NRFH F +G+CSCKD+W
Sbjct: 565 ALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 172/312 (55%), Gaps = 1/312 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ +D A+ +N M GF P FT V+KA A E G + H VK G
Sbjct: 123 LISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 182
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V ++LL+LY G + DA VFD + +N VSW A+I+G+ E+A+ +F+
Sbjct: 183 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQ 242
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G +P FS + AC+ G L KW+H Y+ ++G+ F +L+D+YAK G
Sbjct: 243 GMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG 302
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR++FD++ ++D+VSW+S++ YA +GF EA+ F M+R ++P + + VL+
Sbjct: 303 SIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLT 362
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQV 299
AC+ G L+ G M+++ + T++D+ + G + +A + EM +
Sbjct: 363 ACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAA 422
Query: 300 VWNAVVSGLSMN 311
+W A+++ M+
Sbjct: 423 IWKALLNACRMH 434
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/561 (40%), Positives = 356/561 (63%), Gaps = 7/561 (1%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
++H+L+++ L + + L++ H G L A K+F + + + +I GY
Sbjct: 29 QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYAR 88
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
N EA++++ ++ RG+ D+++ VL AC +LG + + H V + G G ++FV
Sbjct: 89 SQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFV 148
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-EN 227
+L+ Y CG+ A VFD+ +D+V+W+ MI + + G ++A D+ M + +N
Sbjct: 149 INALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN 208
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSF---MERNEFLSNPVLGTTLIDMYAKCGRMA 284
L+P+ TMV ++ ACA LG LE G + S+ +++ E + VL T L+DMYAKCG +
Sbjct: 209 LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSID 268
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A +VFR M+ ++ WNA++ GL+M+G+ + A +F Q+E + P+ TF+ LLC C+
Sbjct: 269 LALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACS 328
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
HAGLVDEG F +M F + P +EHYGC+VDLL R+ ++D+A I++MP++ N+++W
Sbjct: 329 HAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLW 388
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
LL CR DLAE + ++I LEP + G YV+LSN+Y+ +W+ A K+R M +K
Sbjct: 389 ATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNK 448
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKA-AGFVPTTDHVLFD 523
GI+K GCSW+E++G++H+F+ GD SH +E+IY+ ++E+ ++ G VP T +VLFD
Sbjct: 449 GIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFD 508
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
IEEEEK++ L HSEKLA+A GLI+T IRI KNLRVC DCH +K+ SK+ REI+
Sbjct: 509 IEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIV 568
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
RD +RFH F EGSCSC DFW
Sbjct: 569 ARDRSRFHHFKEGSCSCMDFW 589
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 177/324 (54%), Gaps = 8/324 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+ + A+ Y M G N+T+PFVL ACAR +LG R H ++K G
Sbjct: 82 MIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNG 141
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV +L+ Y +CG A VFD+ ++VV+W +I+ ++N+G E+A ++
Sbjct: 142 FGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLD 201
Query: 121 RLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR---NVFVATSLVDLY 176
+ L+PD ++V ++ AC QLG+L K++H Y E K ++ + T+LVD+Y
Sbjct: 202 EMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMY 261
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
AKCG+++ A +VF +M +++ +W+++I G A +G ++A+ +F M+ + L P+ T +
Sbjct: 262 AKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFI 321
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK 294
+L AC+ G ++ G+ M +N+F P + ++D+ + ++ A M
Sbjct: 322 ALLCACSHAGLVDEGLAMFQAM-KNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP 380
Query: 295 DK-DQVVWNAVVSGLSMNGYVKVA 317
K + V+W ++ G+ +A
Sbjct: 381 IKANSVLWATLLGACRSGGHFDLA 404
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/637 (36%), Positives = 360/637 (56%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
+I GF A+ Y+++ G P+ T ++ A + D LG + H I++
Sbjct: 109 VIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILR 168
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV--------------------- 97
G + FV + L+ +Y G + DA +VFD++ KNVV
Sbjct: 169 LGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRL 228
Query: 98 ----------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
+WT +++G+ G +A+N FRR+ +G+ D ++ +LTAC L L
Sbjct: 229 FEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSAL 288
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
K IH Y+ NVFV ++LVD+Y+KC +++ A F +M K+I+SW+++I GY
Sbjct: 289 EQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGY 348
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
NG +EA+ +F MQR+ + P+ +T+ V+S+CA+L +LE G + +
Sbjct: 349 GQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYI 408
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ L+ +Y KCG + A ++F EM DQV W A+V+G + G K +F ++
Sbjct: 409 TVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAK 468
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
++P+G TF+G+L C+ AG V++G +F+SM + + P+ +HY CM+DL RSG+L E
Sbjct: 469 DVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKE 528
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E IK MPM P+AI WG LL+ CRL ++ + L+ ++P N +YVLL ++++
Sbjct: 529 AEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHAT 588
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
WN A++R M D+ ++K GCSW++ VH F D SHP S+ IY KL+ L +K
Sbjct: 589 KGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSK 648
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
+ G+ P VL D+ + +K + ++ HSEKLA+AFGL+ + IRI KNLRVC DC
Sbjct: 649 MLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDC 708
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A KLISKITGR+I+VRD RFH F G CSC DFW
Sbjct: 709 HNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 208/441 (47%), Gaps = 41/441 (9%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F +LL+ H L D +F + ++ VS+ A+I+G+ G A+ ++ LL
Sbjct: 73 FTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRA 132
Query: 126 G--LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
G ++P ++ ++ A + LGD + + H + G G N FV + LV +YAK G +
Sbjct: 133 GSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIG 192
Query: 184 KARRVFDQ-------------------------------MPEKDIVSWSSMIQGYASNGF 212
A+RVFD+ M ++D ++W++M+ G+ NG
Sbjct: 193 DAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGL 252
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+AL+ F M+ + + + YT +L+AC +L ALE G +++ R + N +G+
Sbjct: 253 ESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSA 312
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+DMY+KC + A FR M K+ + W A++ G NG + A VF ++++ GI P+
Sbjct: 313 LVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPD 372
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
T ++ C + ++EG Q F+ ++ V L I +V L G+ G +++AH L
Sbjct: 373 DFTLGSVISSCANLASLEEGAQ-FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLF 431
Query: 393 KSMPMEPNAIVWGALLAGC----RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
M + + W AL+ G R + DL E +L + + +P +LS A
Sbjct: 432 DEMLFH-DQVSWTALVTGYAQFGRAKETIDLFEKMLAKDV--KPDGVTFIGVLSACSRAG 488
Query: 449 HKWNDAAKIRSMMGDKGIQKI 469
+ SM D GI I
Sbjct: 489 FVEKGCSYFHSMQKDHGIVPI 509
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/604 (38%), Positives = 360/604 (59%), Gaps = 2/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ ++ +I+ + M N+ F P T +L+AC D + G H ++ +G
Sbjct: 347 MICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG 405
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+CD L+N+Y CG L + +VF + K+ VSW ++I+ YI G+ +EA+ +F+
Sbjct: 406 YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK 465
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ +KPDS + V +L+ TQLGDL K +H + + G N+ V+ +LVD+YAKCG
Sbjct: 466 -MMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCG 524
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
M + +VF+ M +DI++W+++I + L M M+ E + P+ TM+ +L
Sbjct: 525 EMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILP 584
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C+ L A G + + S+ +G LI+MY+KCG + + +VF+ MK KD V
Sbjct: 585 VCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVT 644
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++S M G K A FG++E GI P+ FV ++ C+H+GLV+EG +F+ M
Sbjct: 645 WTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMK 704
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + P IEHY C+VDLL RS LD+A + I SMP++P++ +WGALL+ CR+ T++A
Sbjct: 705 KDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIA 764
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ V ++I L P ++G YVL+SN+Y+A KW+ IR + +G++K GCSW+E+
Sbjct: 765 QRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNK 824
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V+ F G E++ L LA + G++ VL DI+E+EK+ L HSE+L
Sbjct: 825 VYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERL 884
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL+ T P +++ KNLRVC DCH K ISKI RE++VRD NRFH F +G+CSC
Sbjct: 885 AIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACSC 944
Query: 601 KDFW 604
D+W
Sbjct: 945 GDYW 948
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 228/427 (53%), Gaps = 4/427 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR N F A+ Y+ + P +TFP V+ ACA DF++ H ++ G
Sbjct: 145 IIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMG 204
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D ++ +L+++Y L A KVF+++P ++VVSW ++ISGY G EA+ ++
Sbjct: 205 FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYY 264
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R + G+ PDS+++ VL AC LG + IHG + + G ++V V L+ +Y K
Sbjct: 265 RFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFN 324
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ RR+FD+M +D VSW++MI GY+ G +E++ +F M + KP+ T+ +L
Sbjct: 325 GLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQ 383
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC LG LE G + +M + + + LI+MYAKCG + + +VF MK KD V
Sbjct: 384 ACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS 443
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++++ NG A +F ++ K ++P+ T+V LL T G + G++ ++
Sbjct: 444 WNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLA 502
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++ I +VD+ + G++ ++ ++ ++M + I W ++A C + +L
Sbjct: 503 KM-GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASCVHSEDCNLG 560
Query: 421 EHVLNQL 427
+++++
Sbjct: 561 LRMISRM 567
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 192/394 (48%), Gaps = 31/394 (7%)
Query: 36 VLKACAREHDFQLGVRS-------------HSLIVKAGLDCDEFVKTSLLNLYVHCGYLA 82
VL C+R+ F R+ HSLI+ GL L+ Y H
Sbjct: 65 VLHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPT 124
Query: 83 DALKVFD-DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
+ VF P NV W +II + G EA++++ L+PD+++ V+ AC
Sbjct: 125 SSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC 184
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
L D AK IH V G G ++++ +L+D+Y + +++KAR+VF++MP +D+VSW+
Sbjct: 185 AGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWN 244
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
S+I GY +NG+ EAL+++Y + + P+ YTM VL AC LG++E G +E+
Sbjct: 245 SLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKI 304
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ ++ L+ MY K + ++F +M +D V WN ++ G S G + + +F
Sbjct: 305 GIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF 364
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC------- 374
++ +P+ T +L C H G ++ G+ + M + Y C
Sbjct: 365 MEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYM--------ITSGYECDTTASNI 415
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
++++ + G L + E+ M + +++ W +++
Sbjct: 416 LINMYAKCGNLLASQEVFSGMKCK-DSVSWNSMI 448
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/580 (40%), Positives = 353/580 (60%), Gaps = 5/580 (0%)
Query: 30 NFTFPFVLKAC-AREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD---AL 85
N T+P L +C + + + + +K L D + T L+N A A
Sbjct: 22 NTTYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAH 81
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
++F+ IP ++V + ++ GY +AI++F + L+ L PD ++ +L AC
Sbjct: 82 QLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAK 141
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
K +H + G N +V +L+++YA C +++ A+RVFD++ E +VS++++I
Sbjct: 142 AFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIIT 201
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GYA + P EAL +F +Q LKP T++ VLS+CA LGAL+LG W ++++N
Sbjct: 202 GYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDK 261
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ T LIDMYAKCG + A VF M +D W+A++ +M+G + +F ++
Sbjct: 262 YVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMA 321
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
+ +QP+ TF+GLL C+H GLVDEG ++F SMS V+ + P I+HYGCMVDLLGR+G L
Sbjct: 322 RAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLL 381
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
EA++ I +P++P I+W LL+ C H +LA+ V+NQ++ L+ + G+YV+LSN+
Sbjct: 382 HEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLC 441
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ + KW D +R +M KG KI GCS +EVD VVHEF GD H +S ++ LDEL
Sbjct: 442 ARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELV 501
Query: 506 TKLKAAGFVPTTDHVLF-DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
+LK+ G+VP T V+ D+E+EEK+ L HSEKLA++FGL+ T P IR+ KNLRVC
Sbjct: 502 KELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVC 561
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
GDCH A KLIS + REII+RD RFH F +G CSC D+W
Sbjct: 562 GDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 194/349 (55%), Gaps = 3/349 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG+ ++ AI + N LP ++TFP +LKAC FQ G + H L +K G
Sbjct: 98 MFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLG 157
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + +V +L+N+Y C + A +VFD+I + VVS+ AII+GY EA+++FR
Sbjct: 158 LNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFR 217
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L R LKP+ +++ VL++C LG L KWIH YV + G + V V T+L+D+YAKCG
Sbjct: 218 QLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCG 277
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A VF+ M +D +WS+MI YA +G ++ + MF M R ++P+ T +G+L
Sbjct: 278 SLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLY 337
Query: 241 ACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ- 298
AC+ G ++ G + S E + ++D+ + G + +A K E+ K
Sbjct: 338 ACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTP 397
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
++W ++S S +G +++A V Q+ + +G +V L C AG
Sbjct: 398 ILWRTLLSSCSSHGNLELAKQVMNQILELD-DSHGGDYVILSNLCARAG 445
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/577 (39%), Positives = 357/577 (61%), Gaps = 4/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + TF L ACAR D AG D FV ++LL+LY CG + +A++V
Sbjct: 105 PNSTTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRV 164
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD +P K+ V+W+ +++G++ G EA+ M+ R+ G+ D +V V+ AC G+
Sbjct: 165 FDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNA 224
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+HG + +V TSLV +YAK G+++ A +VF MP ++ V+WS++I G+
Sbjct: 225 RIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGF 284
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A NG EALD+F +Q + L+P + +V L ACAS+G L+LG F+ R
Sbjct: 285 AQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRR-LEWQC 343
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+LGT ++DMY+KCG + A K+F ++ +D V+WNA+++ +G A +F +L +
Sbjct: 344 ILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNET 403
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI+P+ TF LL +H+GLV+EG+ +F+ M + F + P +HY C+VDLL RSG ++E
Sbjct: 404 GIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEE 463
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A++++ SM EP +W LL+GC +KK +L E + +++ L P + G L+SN+Y+A
Sbjct: 464 ANDMLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLYAA 523
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ KW+ +IR +M D G +K+ G S +EV G H F++ D SHP +I + +L ++
Sbjct: 524 AKKWDKVREIRKLMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSE 583
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
++ G+VP T+ V D++E++ L+ HSE+LA+AFGL+ T+P + I KNLRVCGDC
Sbjct: 584 MRKLGYVPRTEFVYHDLDEDQ---LLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDC 640
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H+AIK ISKI REI+VRD RFH F +G+CSC D+W
Sbjct: 641 HDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 677
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 168/316 (53%), Gaps = 4/316 (1%)
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
W ++S + G A+ +FR L +P+S + LTAC +LGDL A+ +
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALPSSA-RPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 159 EAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALD 218
AG G +VFV ++L+ LY++CG ME+A RVFD MP KD V+WS+M+ G+ + G P EAL
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
M+ M+ + + MVGV+ AC S G +G + R+ + V T+L+ MYA
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
K G + AC+VFR M ++ V W+A++SG + NG A +F +L+ G+QP V
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
L C G + G+ + R ++ ++D+ + G L+ A +L +
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRRLEWQCILG--TAVLDMYSKCGSLESARKLFNKLSSR 372
Query: 399 PNAIVWGALLAGCRLH 414
+ ++W A++A C H
Sbjct: 373 -DLVLWNAIIACCGTH 387
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 172/311 (55%), Gaps = 7/311 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GFV+ A+ Y+ MR G V++AC + ++G H +++
Sbjct: 179 MVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHC 238
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D TSL+++Y G+L A +VF +P +N V+W+A+ISG+ G EA+++FR
Sbjct: 239 MRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFR 298
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L GL+P S+++V L AC +G L K IHG++ + + + + T+++D+Y+KCG
Sbjct: 299 ELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRRLEWQCI-LGTAVLDMYSKCG 357
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E AR++F+++ +D+V W+++I ++G +AL +F + +KP++ T +LS
Sbjct: 358 SLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLS 417
Query: 241 ACASLGALELG-VWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDKD 297
A + G +E G W ++ EF P ++D+ A+ G + +A + M+ +
Sbjct: 418 ALSHSGLVEEGKFWFDRMIK--EFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEP 475
Query: 298 QV-VWNAVVSG 307
+ +W ++SG
Sbjct: 476 TIAIWVILLSG 486
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/606 (39%), Positives = 356/606 (58%), Gaps = 6/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G N+C A++ ++ R T T+ V+K CA L + HS ++K G
Sbjct: 273 LMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHG 332
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD-DIPDKNVVSWTAIISGYINEGNLEEAINMF 119
V T+L + Y CG LADAL +F +NVVSWTAIISG I G++ A+ +F
Sbjct: 333 FHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLF 392
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ + P+ F+ +L A + IH V + V T+L+ Y+K
Sbjct: 393 SRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKF 448
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+ E A +F + +KD+V+WS+M+ +A G + A +F M + +KP +T+ V+
Sbjct: 449 GSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVI 508
Query: 240 SACASLGA-LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
ACA A ++ G + + + + + L+ MY++ G + A VF D+D
Sbjct: 509 DACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDL 568
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WN+++SG + +GY A F Q+E GIQ +G TF+ ++ GCTH GLV EG+Q+F+S
Sbjct: 569 VSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDS 628
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M R + P +EHY CMVDL R+G+LDE LI+ MP A+VW LL CR+HK +
Sbjct: 629 MVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVE 688
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L + ++L++LEP +S YVLLSNIY+A+ KW + ++R +M + ++K GCSW+++
Sbjct: 689 LGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIK 748
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F+ D SHP+S++IY KL + T+LK G+ P T VL DI E++K+ L HSE
Sbjct: 749 NKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSE 808
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LALAFGLI T P ++I KNLRVCGDCH +K++S I REII+RD +RFH F G+C
Sbjct: 809 RLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGAC 868
Query: 599 SCKDFW 604
SC DFW
Sbjct: 869 SCGDFW 874
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 202/404 (50%), Gaps = 22/404 (5%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEF-VKTSLLN 73
++ ++ R G L + T VLKAC D LG + H L VK G D E TSL++
Sbjct: 84 LDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVD 143
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y+ CG + + ++VF+ +P KNVV+WT++++G + E + +F R+ G+ P+ F+
Sbjct: 144 MYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFT 203
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
VL+A G L + +H + G +VFV SL+++YAKCG +E A+ VF+ M
Sbjct: 204 FASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWME 263
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
+D+VSW++++ G N EAL +F+ + K T V+ CA+L L L
Sbjct: 264 TRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQ 323
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV-WNAVVSGLSMNG 312
S + ++ F + T L D Y+KCG +A A +F VV W A++SG NG
Sbjct: 324 LHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNG 383
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC-------THAGLVDEGRQFFNSMSRVFSL 365
+ +A +F ++ + + PN T+ +L HA ++ Q S+
Sbjct: 384 DIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPSVG----- 438
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
T ++ Y + G ++A + K M + + + W A+L+
Sbjct: 439 TALLASY-------SKFGSTEDALSIFK-MIEQKDVVAWSAMLS 474
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 206/419 (49%), Gaps = 12/419 (2%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
+ + MR EG P FTF VL A A + LG R H+ VK G FV SL+N+
Sbjct: 186 MALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNM 245
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGY-INEGNLEEAINMFRRLLHRGLKPDSFS 133
Y CG + DA VF+ + +++VSW +++G +NE L EA+ +F K +
Sbjct: 246 YAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECEL-EALQLFHESRATMGKMTQST 304
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
V+ C L L+ A+ +H V + G V T+L D Y+KCG + A +F
Sbjct: 305 YATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTT 364
Query: 194 -EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
+++VSW+++I G NG A+ +F M+ + + P +T +L ASL L +
Sbjct: 365 GSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLK--ASLSILPPQI 422
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
A + + P +GT L+ Y+K G A +F+ ++ KD V W+A++S + G
Sbjct: 423 HAQVI--KTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAG 480
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLL--CGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+ A +F ++ GI+PN T ++ C C AG VD+GRQ F+++S + I
Sbjct: 481 DCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAG-VDQGRQ-FHAISIKYRYHDAIC 538
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+V + R G +D A +++ + + + W ++++G H + A Q+ A
Sbjct: 539 VSSALVSMYSRKGNIDSA-QIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEA 596
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 12/237 (5%)
Query: 185 ARRVFDQMPEKDI-VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
AR D++P +D V + ++ YA G E LD F +R + + T+ VL AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 244 SLGALELG-----VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
S+ LG + +R E + GT+L+DMY KCG + + +VF M K+
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSA----GTSLVDMYMKCGSVCEGIEVFEGMPKKNV 166
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W ++++G + +F ++ GI PN TF +L G +D G Q ++
Sbjct: 167 VTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG-QRVHA 225
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
S F + ++++ + G +++A + M + + W L+AG +L++
Sbjct: 226 QSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLMAGLQLNE 281
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/605 (38%), Positives = 349/605 (57%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A++ + MRN F P+ FTF +L D G + H L +K
Sbjct: 215 MITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTS 274
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV +LL+ Y Y+ A +FD++P+ + VS+ II+GY G E++ ++F+
Sbjct: 275 YVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFK 334
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RL +F +L+ +LS + H V V +LVD+YAKC
Sbjct: 335 RLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCE 394
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
E A R+F + ++ V W+++I Y GF +EAL MF M REN+ + T L
Sbjct: 395 KFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLK 454
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A+L ++ LG S + R LS+ G+ L+DMYA CG M A +VF+EM D++ V
Sbjct: 455 ASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVC 514
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++S S NG + F F + + G+ P+ +F+ +L C+H GLV++ +FNSM+
Sbjct: 515 WNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMT 574
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+V+ L P +HY M+D+L RSG+ +EA LI MP EP+ ++W ++L CR+HK DLA
Sbjct: 575 QVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLA 634
Query: 421 EHVLNQLIALEPW-NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ +QL ++ ++ YV +SNIY+ + KW +AAK++ M ++G++K+ SWVE+D
Sbjct: 635 KKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDH 694
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F D +HP +E+I K++ L + G+ P T L +++EE K L HSE+
Sbjct: 695 RVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSER 754
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AF LI T I I KNLR C DCH AIK+ISKI GREI VRD++RFH F +GSCS
Sbjct: 755 LAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCS 814
Query: 600 CKDFW 604
C D+W
Sbjct: 815 CGDYW 819
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 201/410 (49%), Gaps = 2/410 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N+ + A Y M G P + TF +L + ++ HS I++ G
Sbjct: 114 MIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFG 173
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
V SL++ Y L A ++F ++P K+ VS+ +I+GY G EEA+ +F
Sbjct: 174 FSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFM 233
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + +P F+ +L D+ + IHG + ++FVA +L+D Y+K
Sbjct: 234 QMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHD 293
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+ +FD+MPE D VS++ +I GYA NG +++ D+F +Q + + + +LS
Sbjct: 294 YIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLS 353
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A L +G + +S +G L+DMYAKC + A ++F + ++ V
Sbjct: 354 VAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVP 413
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++S G+ + A +F ++ + + + TF L + V G+Q +S+
Sbjct: 414 WTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVI 473
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
R+ L+ + +VD+ G + +A E+ K MP + N + W AL++
Sbjct: 474 RLGLLSSVFSG-SVLVDMYANCGSMKDAIEVFKEMP-DRNIVCWNALISA 521
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 180/391 (46%), Gaps = 18/391 (4%)
Query: 25 GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE--FVKTSLLNL----YVHC 78
GF P F F LK R + I KA DE + TS +N+ YV
Sbjct: 41 GFDPEISRFNFKLKDLVRANQ----------IAKARQLFDEMPYRNTSSVNMMVSGYVKS 90
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
L A ++F+ + +N VSWT +I GY +EA N++ + G+KPD + +L
Sbjct: 91 RNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLL 150
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
+ L IH ++ G ++ V SLVD Y K ++ A ++F +MP KD V
Sbjct: 151 SGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSV 210
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
S++ MI GY GF +EAL +F M+ + +P +T +L + G
Sbjct: 211 SFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLA 270
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ ++ + + L+D Y+K + A +F EM + D V +N +++G + NG + +F
Sbjct: 271 IKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSF 330
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
+F +L+ F +L + GRQ ++ + V + ++ +VD+
Sbjct: 331 DLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQ-THAQAVVTTAVSEVQVGNALVDM 389
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ + ++A+ + ++ N++ W A+++
Sbjct: 390 YAKCEKFEDANRIFANLAYR-NSVPWTAIIS 419
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/569 (40%), Positives = 351/569 (61%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+ CAR H I++ L+ D + L+N Y CG++ A +VFD + +++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+VSW +I Y EA+++F + + G K F+I VL+AC D K +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ N++V T+L+DLYAKCG ++ A +VF+ M +K V+WSSM+ GY N +E
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL ++ QR +L+ +T+ V+ AC++L AL G + + ++ F SN + ++ +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MYAKCG + ++ +F E+++K+ +WN ++SG + + K +F ++++ G+ PN T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
F LL C H GLV+EGR+FF M + L+P + HY CMVD+LGR+G L EA+ELIKS+
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
P +P A +WG+LLA CR++K +LAE +L LEP N+GN+VLLSNIY+A+ +W + A
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
K R ++ D ++K+RG SW+++ VH F VG++ HP +I S LD L K + G+ P
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
+ +H L D+E +K+ L HSEKLAL FGL+ +RI KNLR+C DCHE +K S
Sbjct: 547 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 606
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
T R IIVRD NRFH F +G CSC DFW
Sbjct: 607 MATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 178/309 (57%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + N A++ + MRNEGF + FT VL AC D + H L VK
Sbjct: 133 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 192
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D + +V T+LL+LY CG + DA++VF+ + DK+ V+W+++++GY+ N EEA+ ++R
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R L+ + F++ V+ AC+ L L K +H + ++G G NVFVA+S VD+YAKCG
Sbjct: 253 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 312
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ ++ +F ++ EK++ W+++I G+A + PKE + +F MQ++ + P T +LS
Sbjct: 313 SLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 372
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
C G +E G M LS N V + ++D+ + G +++A ++ + + D
Sbjct: 373 VCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTA 432
Query: 299 VVWNAVVSG 307
+W ++++
Sbjct: 433 SIWGSLLAS 441
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/588 (39%), Positives = 351/588 (59%), Gaps = 10/588 (1%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M G P FTFPF +K+CA G + H + K G + FV+TSL+++Y C
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 81 LADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
+ +A K+FD+ P K V + +++SGY +++ + +F + G++ + +++ ++
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
C G+L +HG+ + G + V L+ +Y K G ++ R++FD+MP K ++
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+W++MI GYA NG L+++ M+ + P+ T+VGVLS+CA LGAL +G M
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
E F SNP L L++MYA+CG + +A +F M K V W A++ G M+G +VA
Sbjct: 241 EGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAV 300
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
G+F ++ + GI+P+G FV +L C+HAGL ++G +F M R + L P EHY CMVDL
Sbjct: 301 GLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDL 360
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNY 438
LGR+G+L+EA ELI+SM + + +WGALL C++H+ +LAE Q+I LEP N+G Y
Sbjct: 361 LGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYY 420
Query: 439 VLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIY 498
VLLSN+Y+ + ++R +M + ++K GCS+VE G VH F GD +HP + +IY
Sbjct: 421 VLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIY 480
Query: 499 SKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF--LACHSEKLALAFGLITTAPKDVIR 556
KL+EL +K DH E ++Y + HSEKLA+AF L+ T + I
Sbjct: 481 KKLNELENLVKDLDGCKKNDH------ERREEYLNSMGVHSEKLAVAFALLNTRKETEII 534
Query: 557 IAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I KNLR+CGDCH IKL+SKI R+ +VRD RFH F G CSCK++W
Sbjct: 535 IIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 179/342 (52%), Gaps = 4/342 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N + + + MR G T +++ C + LG+ H VK G
Sbjct: 84 LLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFG 143
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D V LL +YV G + K+FD++P K +++W A+I+GY G + +++
Sbjct: 144 LDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYK 203
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +G PD ++V VL++C LG LS K + + G N F+ +LV++YA+CG
Sbjct: 204 EMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCG 263
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N++KAR +FD MP K +VSW+++I GY +G + A+ +F M R +KP+ V VLS
Sbjct: 264 NLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLS 323
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMKDK-DQ 298
AC+ G G+ MER L + ++D+ + GR+ +A ++ M+ + D
Sbjct: 324 ACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADG 383
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
+W A++ ++ V++A F Q+ + ++P + LL
Sbjct: 384 ALWGALLGACKIHRNVELAELAFEQVIE--LEPTNTGYYVLL 423
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/517 (45%), Positives = 329/517 (63%), Gaps = 6/517 (1%)
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+PD + S ++ + + A+ + RR R PD+ + +L ACT+L L
Sbjct: 83 LPDPDPFSLNTVLRIAASSAHPRIALALHRR---RLAPPDTHTYPPLLQACTRLLALREG 139
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYA 208
+ +H + G VFV SLV Y CG E A RVFD++P E+++VSW+S++ G+A
Sbjct: 140 ESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMNGFA 199
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+NG P E L +F +L P+ +T+V VL+ACA +GAL LG F + + N
Sbjct: 200 ANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSH 259
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+G LID+YAKCG + A KVF EM VV W +++ GL+ NG+ K A +FG +E+
Sbjct: 260 VGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERE 319
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+ P T VG+L C+H GLVD+G ++FN M + + P IEH GCMVDLLGR+G+++E
Sbjct: 320 RLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEE 379
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
AH I +MP+EPNA+VW LL C +HKK +L E +L+ L+P +SG+YVLLSN+Y+A
Sbjct: 380 AHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAA 439
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+W DA +R M G++K G S VE+ V+EF++GD SHP S++IY L E+A +
Sbjct: 440 VGRWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAEIAER 499
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ G+VP T +VL DIEEEEK+ L HSE+LA+AF L+ + P IRI KNLR+CGDC
Sbjct: 500 LRCQGYVPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIVKNLRMCGDC 559
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H IKLISK+ REIIVRD +RFH F G CSCKD+W
Sbjct: 560 HLVIKLISKVYDREIIVRDRSRFHHFKGGECSCKDYW 596
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 175/303 (57%), Gaps = 7/303 (2%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P T+P +L+AC R + G H+ K GL FVK SL++ Y CG A +V
Sbjct: 118 PDTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRV 177
Query: 88 FDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
FD+IP ++N+VSW ++++G+ G E + +FR L L PD F+IV VLTAC ++G
Sbjct: 178 FDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIG 237
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
L+ + +H + ++ G N V +L+DLYAKCG +E A +VF++M + +VSW+S+I
Sbjct: 238 ALTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLI 297
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G A NGF K+AL++F M+RE L P TMVGVL AC+ G ++ G + M+ +
Sbjct: 298 VGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGI 357
Query: 265 SNPV--LGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ + LG ++D+ + GR+ +A M + + VVW ++ +M+ +++ +
Sbjct: 358 APGIEHLG-CMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAW 416
Query: 322 GQL 324
+L
Sbjct: 417 ARL 419
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 3/207 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GF +N + + +P FT VL ACA LG R H K G
Sbjct: 194 VMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVG 253
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
L + V +L++LY CG + DA KVF+++ + VVSWT++I G G ++A+ +F
Sbjct: 254 LVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELF 313
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ L P ++V VL AC+ G + ++ + ++ G + +VDL +
Sbjct: 314 GLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGR 373
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMI 204
G +E+A MP E + V W +++
Sbjct: 374 AGRVEEAHNYITTMPVEPNAVVWRTLL 400
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/603 (39%), Positives = 359/603 (59%), Gaps = 37/603 (6%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVH--CGYLADALKVFDDIPD 93
+L+ C+ D ++ H+ +++ L D F + L+ + L A++V I +
Sbjct: 23 LLECCSNARDLKI---IHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQN 79
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
N+ + A+I G N E + + + + L GL PD+ + ++ AC QL +
Sbjct: 80 PNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQT 139
Query: 154 HGYVNEAGKGRNVFVATSLVDLYA-------------------------------KCGNM 182
HG + G ++ +V SLV +YA +CG+
Sbjct: 140 HGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDA 199
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
+ AR +FD+MPE+++V+WS+MI GYA N ++A++ F +Q E + MVGV+S+C
Sbjct: 200 KSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSC 259
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
A LGAL +G A ++ RN+ N +LGT ++DMYA+CG + +A VF ++ +KD + W
Sbjct: 260 AHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWT 319
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
A+++GL+M+GY + A F ++ K G P TF +L C+HAG+V+ G + F SM R
Sbjct: 320 ALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRD 379
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ P +EHYGCMVDLLGR+G+L +A + + MP++PNA +W ALL CR+HK ++ E
Sbjct: 380 HGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGER 439
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
V L+ ++P SG+YVLLSNIY+ ++KW D +R MM DKG++K G S +E+DG VH
Sbjct: 440 VGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVH 499
Query: 483 EFLVGDNSHPLSEKIYSKLDELA-TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
EF +GD +HP EKI +++ K+K AG+V T +FDI+EEEK+ L HSEKLA
Sbjct: 500 EFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMFDIDEEEKEGALHRHSEKLA 559
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+A+G++ IRI KNLRVC DCH A KLISK+ E+IVRD NRFH F EG+CSC
Sbjct: 560 IAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVELIVRDRNRFHHFKEGTCSCM 619
Query: 602 DFW 604
D+W
Sbjct: 620 DYW 622
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 184/350 (52%), Gaps = 35/350 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG +++ +++ +Y G LP N T PF++KACA+ + +G+++H +K G
Sbjct: 88 LIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHG 147
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY-------------- 106
+ D +V+ SL+++Y G + A VF + +VVSWT +I+GY
Sbjct: 148 FEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFD 207
Query: 107 -INEGNL----------------EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+ E NL E+A+ F L G+ + +V V+++C LG L+
Sbjct: 208 RMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAM 267
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ H YV N+ + T++VD+YA+CGN+EKA VF+Q+PEKD++ W+++I G A
Sbjct: 268 GEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAM 327
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+G+ ++AL F M ++ P T VL+AC+ G +E G+ M+R+ + P L
Sbjct: 328 HGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVE-PRL 386
Query: 270 GT--TLIDMYAKCGRMAQACKVFREMKDKDQV-VWNAVVSGLSMNGYVKV 316
++D+ + G++ +A K +M K +W A++ ++ V+V
Sbjct: 387 EHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEV 436
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 148/319 (46%), Gaps = 11/319 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N+CF+ A+E + +++ EG + V+ +CA +G ++H +++
Sbjct: 220 MISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNK 279
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + + T+++++Y CG + A+ VF+ +P+K+V+ WTA+I+G G E+A+ F
Sbjct: 280 LSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFS 339
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI-HGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G P + VLTAC+ G + I + G + +VDL +
Sbjct: 340 EMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRA 399
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPEYYTM 235
G + KA + +MP K + W +++ + + + + MQ PEY
Sbjct: 400 GKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQ-----PEYSGH 454
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+LS + V M +++ + P G +LI++ K K E++
Sbjct: 455 YVLLSNIYARANKWKDVTVMRQMMKDKGVRKPP-GYSLIEIDGKVHEFTIGDKTHPEIEK 513
Query: 296 KDQVVWNAVVSGLSMNGYV 314
+++ + ++ + + GYV
Sbjct: 514 IERIWEDIILPKIKLAGYV 532
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/536 (41%), Positives = 344/536 (64%), Gaps = 8/536 (1%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+++ Y G + +A ++FD+ P +V +WTA++SGYI +EEA +F R+ R
Sbjct: 249 NTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER--- 305
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
+ S +L Q + AK + + RNV +++ YA+CG + +A+ +
Sbjct: 306 -NEVSWNAMLAGYVQGERVEMAKELFDVM----PCRNVSTWNTMITGYAQCGKISEAKNL 360
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD+MP++D VSW++MI GY+ +G EAL +F M+RE + + LS CA + AL
Sbjct: 361 FDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVAL 420
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
ELG + + + + +G L+ MY KCG + +A +F+EM KD V WN +++G
Sbjct: 421 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 480
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
S +G+ + A F +++ G++P+ T V +L C+H GLVD+GRQ+F++M++ + + P
Sbjct: 481 SRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPN 540
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+HY CMVDLLGR+G L+EAH L+K+MP EP+A +WG LL R+H T+LAE +++
Sbjct: 541 SQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 600
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
A+EP NSG YVLLSN+Y++S +W D K+R M DKG++K+ G SW+E+ H F VGD
Sbjct: 601 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 660
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
HP ++I++ L++L ++K AG+V T VL D+EEEEK+ + HSE+LA+A+G++
Sbjct: 661 EFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMR 720
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ IR+ KNLRVC DCH AIK ++K+TGR II+RDNNRFH F +GSCSC D+W
Sbjct: 721 VSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 195/420 (46%), Gaps = 38/420 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G++ N F+ A ++ M + N ++K R + LG ++ L +
Sbjct: 96 MISGYLRNGEFELARMLFDEMPERDLVSWNV----MIKGYVRNRN--LG-KARELFERMP 148
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D ++L+ Y G + DA +VFD +P+KN VSW A++S Y+ LEEA +F
Sbjct: 149 -ERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFG 207
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG-YVNEAGKGRNVFVATSLVDLYAKC 179
+ L V C G + K + ++ K R+V +++ YA+
Sbjct: 208 SRENWAL---------VSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQN 258
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +++AR++FD+ P D+ +W++M+ GY N +EA ++F M N + G +
Sbjct: 259 GEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYV 318
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A EL M N T+I YA+CG++++A +F +M +D V
Sbjct: 319 QGERVEMAKEL----FDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 370
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W A+++G S +G+ A +F +E+ G + N ++F L C ++ G+Q +
Sbjct: 371 SWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 430
Query: 360 SRVFSLTPMIEHYGCMVD-----LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ T GC V + + G ++EA++L K M + + + W ++AG H
Sbjct: 431 VKGGYET------GCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRH 483
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 5/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A+ + M EG +F L CA +LG + H +VK G
Sbjct: 375 MIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 434
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +LL +Y CG + +A +F ++ K++VSW +I+GY G EEA+ F
Sbjct: 435 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFE 494
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ GLKPD ++V VL+AC+ G + + + H + G N +VDL +
Sbjct: 495 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRA 554
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
G +E+A + MP E D W +++ +G + A D + M+ EN
Sbjct: 555 GLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN 606
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 164/344 (47%), Gaps = 36/344 (10%)
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
++ Y+ G ++AL+VF +P + VS+ A+ISGY+ G E A +F + R D
Sbjct: 66 ISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPER----DL 121
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
S ++ + +L A+ + + E R+V +++ YA+ G ++ ARRVFD+
Sbjct: 122 VSWNVMIKGYVRNRNLGKARELFERMPE----RDVCSWNTILSGYAQNGCVDDARRVFDR 177
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
MPEK+ VSW++++ Y N +EA +F + REN ++S LG
Sbjct: 178 MPEKNDVSWNALLSAYVQNSKLEEACVLFGS--RENW--------ALVSWNCLLGGF--- 224
Query: 252 VWASSFMERNEF-----LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
V +E +F + + V T+I YA+ G + +A ++F E D W A+VS
Sbjct: 225 VKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVS 284
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G N V+ A +F ++ + N ++ +L G V+ ++ F+ M
Sbjct: 285 GYIQNRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELFDVMP-----C 335
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + M+ + G++ EA L MP + + + W A++AG
Sbjct: 336 RNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 378
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 146/347 (42%), Gaps = 63/347 (18%)
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
D ++ W IS Y+ G EA+ +F+R+ +W
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKRM---------------------------PRW 88
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
N +++ Y + G E AR +FD+MPE+D+VSW+ MI+GY N
Sbjct: 89 SSVSYN------------AMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRN 136
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+A ++F M ++ + +LS A G ++ M N V
Sbjct: 137 LGKARELFERMPERDV----CSWNTILSGYAQNGCVDDARRVFDRMPEK----NDVSWNA 188
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+ Y + ++ +AC +F ++ V WN ++ G + A F ++ +
Sbjct: 189 LLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVV-- 246
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNS--MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
++ ++ G G +DE RQ F+ + VF+ T M+ Y ++ ++EA E
Sbjct: 247 --SWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGY-------IQNRMVEEARE 297
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEPWNS 435
L MP E N + W A+LAG ++ ++A+ + + + + WN+
Sbjct: 298 LFDRMP-ERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNT 343
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/604 (38%), Positives = 360/604 (59%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + D + E + M+ EG +P FT+P +L+ C LG + H+ ++K G
Sbjct: 434 MLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTG 493
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +V + L+++Y G LA AL++ +P+ +VVSWTA+I+GY+ EA+ +F
Sbjct: 494 FQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFE 553
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +RG++ D+ ++AC + L + IH AG G ++ + +L+ LYA+CG
Sbjct: 554 EMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCG 613
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++A F+++ +K+ +SW+S++ G A +G+ +EAL +F M R + +T +S
Sbjct: 614 RIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAIS 673
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A ASL ++ G S + + + S + +LI +YAK G ++ A + F +M +++ +
Sbjct: 674 AAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVIS 733
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+++G S +G A +F +++ CGI PN TFVG+L C+H GLV EG +F SM
Sbjct: 734 WNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMF 793
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++ L P EHY C+VDLLGR+GQLD A E IK MP+ +A++W LL+ C +HK ++
Sbjct: 794 KIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIG 853
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + L+ LEP +S YVL+SNIY+ S +W R +M D+G++K G SW+EV
Sbjct: 854 ERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNA 913
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F GD HPL+ +IY + L + G+V + +L + E+ +K HSEKL
Sbjct: 914 VHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKL 973
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL++ IR+ KNLRVC DCH IK +SKI+ R IIVRD +RFH F G CSC
Sbjct: 974 AIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSC 1033
Query: 601 KDFW 604
KDFW
Sbjct: 1034 KDFW 1037
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 205/410 (50%), Gaps = 2/410 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N + AI + M PT + VL A + F+LG + H L++K G
Sbjct: 232 MISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +V L+ LY L A ++F + ++ VS+ ++ISG + +G + A+ +F
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFT 351
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ LKPD ++ +L+AC +G L +H + +AG ++ + SL+DLY+KC
Sbjct: 352 KMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCA 411
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A + F ++IV W+ M+ Y ++ ++F MQ E + P +T +L
Sbjct: 412 DVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILR 471
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C SLGAL LG + + + F N + + LIDMYAK G++A A ++ R + + D V
Sbjct: 472 TCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVS 531
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A+++G + A +F ++E GIQ + F + C + +G+Q ++ S
Sbjct: 532 WTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ-IHAQS 590
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ ++ L R G++ EA+ + + + N I W +L++G
Sbjct: 591 YAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLVSG 639
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 209/417 (50%), Gaps = 7/417 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKAC-AREHDFQLGVRSHSLIVKA 59
MI FV+ + M EG P +TF VLKAC + F + HS
Sbjct: 130 MIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYY 189
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D V L++LY GY+ A KVF+ I K++V+W A+ISG G EEAI +F
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ + P + + VL+A T++ + +H V + G +V LV LY++
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ A R+F M +D VS++S+I G GF AL++F MQR+ LKP+ T+ +L
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACAS+GAL G+ S + ++ +L +L+D+Y+KC + A K F + ++ V
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIV 429
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+WN ++ + +F +F Q++ G+ PN T+ +L CT G + G Q
Sbjct: 430 LWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH--- 486
Query: 360 SRVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ V + Y C ++D+ + GQL A +++ +P E + + W A++AG H
Sbjct: 487 THVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 199/398 (50%), Gaps = 5/398 (1%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
I+ N M G + ++L+ C +R H I K+G D + + SL++
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
Y G A+KVFD+ +++V SW +I ++ + + + +FRR+L G+ P+ ++
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 135 VRVLTACTQLGDLS--TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
VL AC GD++ K +H G + VA L+DLY+K G +E A++VF+ +
Sbjct: 163 AGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI 221
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
KDIV+W +MI G + NG +EA+ +F +M + P Y + VLSA + ELG
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGE 281
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ + F S + L+ +Y++ ++ A ++F M +D V +N+++SGL G
Sbjct: 282 QLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 341
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ A +F ++++ ++P+ T LL C G + +G Q + + ++ I
Sbjct: 342 FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKA-GMSADIILE 400
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G ++DL + ++ AH+ + E N ++W +L
Sbjct: 401 GSLLDLYSKCADVETAHKFFLTTETE-NIVLWNVMLVA 437
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 144/349 (41%), Gaps = 42/349 (12%)
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
I + + RG++ + + + +L C G L +H ++++G + SLVD
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y + G+ A +VFD+ + + SW+ MI + + + +F M E + P YT
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 236 VGVLSACASLGALELGVWASSFMERN---EFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
GVL AC G + + R F S+P++ LID+Y+K G + A KVF
Sbjct: 163 AGVLKACVG-GDIAFN-YVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
+ KD V W A++SGLS NG + A +F + I P +L T L + G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 353 RQF----------------------------FNSMSRVFSLTPMIE--HYGCMVDLLGRS 382
Q S R+FS + Y ++ L +
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340
Query: 383 GQLDEAHELIKSMP---MEPNAIVWGALLAGC----RLHKKTDLAEHVL 424
G D A EL M ++P+ I +LL+ C LHK L H +
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/606 (38%), Positives = 352/606 (58%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + ++ A + M++EG TF +L AC + Q G I +
Sbjct: 82 MISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETS 141
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV T+L+ +Y C +A +VF + KN+++W+AII+ + + G+ EA+ FR
Sbjct: 142 FELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFR 201
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC- 179
+ G+ P+ + + +L T L IH + E G ++ +LV++Y +C
Sbjct: 202 MMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCE 261
Query: 180 -GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G ++ A + +M E+ I +W+ +I GY +G +EAL+ + +Q E + + T + V
Sbjct: 262 TGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISV 321
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L+AC S +L G S S+ ++ L +MY+KCG M A ++F M +
Sbjct: 322 LNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSA 381
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WN ++ + +G + + ++E+ G++ NG TFV +L C+HAGL+ EG Q+F+S
Sbjct: 382 VSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHS 441
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ + EHYGC+VDLLGR+G+L EA + I MP EP + W +LL CR+HK D
Sbjct: 442 LGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLD 501
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
+ +L+ L+P NS V+LSNIYS W +AAK+R M + ++K+ G S ++V
Sbjct: 502 RGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVK 561
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VHEF V D SHP + +IY K++EL ++ AG+VP T VL D++EE+K+ LA HSE
Sbjct: 562 NKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSE 621
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA+AFGLI+T K + I KNLRVC DCH A K ISKITGREI+VRDN+RFH F +GSC
Sbjct: 622 KLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSC 681
Query: 599 SCKDFW 604
SCKD+W
Sbjct: 682 SCKDYW 687
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 199/397 (50%), Gaps = 4/397 (1%)
Query: 24 EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD 83
EG TF VL + + G HS + ++ D FV T+L+N Y CG L D
Sbjct: 4 EGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTD 63
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A KVFD +P ++V +W ++IS Y EA +F+R+ H G + D + + +L AC
Sbjct: 64 ARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVN 123
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+L K + ++E ++FV T+L+ +YA+C + E A +VF +M +K++++WS++
Sbjct: 124 PENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAI 183
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I +A +G EAL F MQ+E + P T + +L+ + LE + +
Sbjct: 184 ITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGL 243
Query: 264 LSNPVLGTTLIDMYAKC--GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ L+++Y +C G + A + +EM ++ WN +++G +++G + A +
Sbjct: 244 DDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETY 303
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
+L+ I + TF+ +L CT + + EG+ +S + L + + ++ +
Sbjct: 304 QRLQLEAIPVDKVTFISVLNACTSSTSLAEGK-MIHSNAVECGLDSDVIVKNALTNMYSK 362
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
G ++ A + SMP+ +A+ W +L H +++
Sbjct: 363 CGSMENARRIFDSMPIR-SAVSWNGMLQAYAQHGESE 398
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 172/349 (49%), Gaps = 21/349 (6%)
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+L G+K + + + VL + L K+IH V E+ +VFV T+LV+ Y KCG+
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ AR+VFD MP + + +W+SMI Y+ + EA +F MQ E + + T + +L A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C + L+ G + F + +GT LI MYA+C A +VF MK K+ + W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
+A+++ + +G+ A F +++ GI PN TF+ LL G T ++E +SR
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEE-------LSR 233
Query: 362 VFSLTPMIEH--------YGCMVDLLGR--SGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ L + EH +V++ GR +G+LD A +++ M E W L+ G
Sbjct: 234 IHLL--ITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD-EQQITAWNVLINGY 290
Query: 412 RLHKKTDLAEHVLNQL-IALEPWNSGNYVLLSNIYSASHKWNDAAKIRS 459
LH ++ A +L + P + ++ + N ++S + I S
Sbjct: 291 TLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHS 339
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/608 (40%), Positives = 359/608 (59%), Gaps = 5/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V N F A+ +++MR E LP +FTFP V KA A H G + H+L +K G
Sbjct: 80 LISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGG 139
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV S ++Y G +A +FD++P +N+ +W A +S + +G +AI F+
Sbjct: 140 NILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFK 199
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ L +P++ + L AC + L + +HG++ + +V V L+D Y KCG
Sbjct: 200 KFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCG 259
Query: 181 NMEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
++ + VF ++ +++VSW S++ N + A +F ++E ++P + + V
Sbjct: 260 DIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE-VEPTDFMISSV 318
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
LSACA LG LELG + + N +G+ L+D+Y KCG + A +VFREM +++
Sbjct: 319 LSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNL 378
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEK--CGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
V WNA++ G + G V +A +F ++ CGI + T V +L C+ AG V+ G Q F
Sbjct: 379 VTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIF 438
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
SM + + P EHY C+VDLLGRSG +D A+E IK MP+ P VWGALL C++H K
Sbjct: 439 ESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGK 498
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
T L + +L L+P +SGN+V+ SN+ +++ +W +A +R M D GI+K G SWV
Sbjct: 499 TKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVA 558
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
V VH F D+ H + +I + L +L ++K AG+VP + LFD+EEEEK + H
Sbjct: 559 VKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYH 618
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEK+ALAFGLIT IRI KNLR+C DCH AIK ISKI GREIIVRDNNRFH F +G
Sbjct: 619 SEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDG 678
Query: 597 SCSCKDFW 604
CSCKD+W
Sbjct: 679 WCSCKDYW 686
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 199/451 (44%), Gaps = 19/451 (4%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA-GLDCDEFVKTSLLNLYVHCGYLADALK 86
P N F L++ LG H+ I++ F+ L+N+Y A
Sbjct: 6 PPNLLGSF-LESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQL 64
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
V + VV+WT++ISG ++ A+ F + + P+ F+ V A L
Sbjct: 65 VLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHM 124
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
T K +H + G +VFV S D+Y+K G +AR +FD+MP +++ +W++ +
Sbjct: 125 PVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSN 184
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
+G +A+ F + +P T L+ACA + +LELG F+ R+ + +
Sbjct: 185 AVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYRED 244
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKD--KDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ LID Y KCG + + VF + ++ V W ++++ L N + A VF Q
Sbjct: 245 VSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQA 304
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY----GCMVDLLG 380
K ++P +L C G ++ GR +L +E +VDL G
Sbjct: 305 RK-EVEPTDFMISSVLSACAELGGLELGRSV-----HALALKACVEENIFVGSALVDLYG 358
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
+ G ++ A ++ + MP E N + W A++ G D+A + ++ + + +YV
Sbjct: 359 KCGSIEYAEQVFREMP-ERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVT 417
Query: 441 LSNIYSASHKWNDAAK----IRSMMGDKGIQ 467
L ++ SA + + SM G GI+
Sbjct: 418 LVSVLSACSRAGAVERGLQIFESMRGRYGIE 448
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/618 (37%), Positives = 374/618 (60%), Gaps = 14/618 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ N+ F A+E+ M EG P FT VL AC+ + G H+ +K G
Sbjct: 269 VLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNG 328
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
LD + FV ++L+++Y +C + +VFD + D+ + W A+I+GY EEA+ +F
Sbjct: 329 SLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLF 388
Query: 120 RRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ GL +S ++ V+ AC + G S + IHG+V + G R+ FV +L+D+Y++
Sbjct: 389 IEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSR 448
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-----------REN 227
G ++ A+R+F +M ++D+V+W+++I GY + ++AL M + MQ R +
Sbjct: 449 LGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVS 508
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
LKP T++ +L +CA+L AL G ++ +N ++ +G+ L+DMYAKCG + +
Sbjct: 509 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 568
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
KVF ++ ++ + WN +V M+G + A + + G++PN TF+ + C+H+G
Sbjct: 569 KVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSG 628
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME-PNAIVWGA 406
+V+EG + F +M + + + P +HY C+VDLLGR+G++ EA++LI +P A W +
Sbjct: 629 MVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSS 688
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
LL CR+H ++ E LI LEP + +YVLL+NIYS++ W A ++R M +G+
Sbjct: 689 LLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGV 748
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
+K GCSW+E VH+F+ GD+SHP SEK+ L+ L +++ G++P T VL ++EE
Sbjct: 749 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEE 808
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
+EK+ L HSEKLA+AFG++ T+P +IR+AKNLRVC DCH A K ISK+ REII+RD
Sbjct: 809 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRD 868
Query: 587 NNRFHCFIEGSCSCKDFW 604
RFH F G+CSC D+W
Sbjct: 869 VRRFHHFKNGTCSCGDYW 886
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 218/438 (49%), Gaps = 11/438 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++R V ++ + A+ Y M G P NF FP +LKA A D LG + H+ + K G
Sbjct: 64 LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFG 123
Query: 61 LDCDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D V +L+NLY CG KVFD I ++N VSW ++IS + E A+ F
Sbjct: 124 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 183
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLG---DLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
R +L ++P SF++V V AC+ L K +H Y G+ N F+ +LV +Y
Sbjct: 184 RCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGE-LNSFIINTLVAMY 242
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
K G + ++ + +D+V+W++++ N EAL+ M E ++P+ +T+
Sbjct: 243 GKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTIS 302
Query: 237 GVLSACASLGALELGVWASSFMERNEFL-SNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
VL AC+ L L G ++ +N L N +G+ L+DMY C ++ C+VF M D
Sbjct: 303 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFD 362
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK-CGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+ +WNA+++G + N Y + A +F ++E+ G+ N T G++ C +G +
Sbjct: 363 RKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEA 422
Query: 355 FFN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+ R +++ ++D+ R G++D A + M + + + W ++ G
Sbjct: 423 IHGFVVKRGLDRDRFVQN--ALMDMYSRLGKIDIAKRIFGKME-DRDLVTWNTIITGYVF 479
Query: 414 HKKTDLAEHVLNQLIALE 431
++ + A +L+++ LE
Sbjct: 480 SERHEDALLMLHKMQILE 497
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 136/261 (52%), Gaps = 5/261 (1%)
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
W ++ + L EA+ + ++ G+KPD+F+ +L A L D+ K IH +V
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 159 EAGKG-RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G G +V VA +LV+LY KCG+ +VFD++ E++ VSW+S+I S + AL
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALE---LGVWASSFMERNEFLSNPVLGTTLI 274
+ F M E+++P +T+V V AC++ E +G ++ R L N + TL+
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGEL-NSFIINTLV 239
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
MY K G++A + + + +D V WN V+S L N A ++ G++P+G
Sbjct: 240 AMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGF 299
Query: 335 TFVGLLCGCTHAGLVDEGRQF 355
T +L C+H ++ G++
Sbjct: 300 TISSVLPACSHLEMLRTGKEL 320
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/586 (39%), Positives = 349/586 (59%), Gaps = 30/586 (5%)
Query: 24 EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD 83
+G P FTF +L CA + + G + H+ +++A + + V+T L+++Y CG L
Sbjct: 272 DGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNY 331
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A ++F+ + ++N SW ++I GY G +EA+ +F+++ G+KPD FS+ +L++C
Sbjct: 332 AKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVS 391
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD--IVSWS 201
L D + +H ++ + LVD+YAKCG+M+ A +V+DQ +KD W+
Sbjct: 392 LSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWN 451
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
S++ GYA+ G KE+ + F M +++ + TMV +++
Sbjct: 452 SILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLL------------------- 492
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
VL T L+DMY+KCG + +A VF M K+ V WNA++SG S +G K A ++
Sbjct: 493 ------VLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILY 546
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ K G+ PN TF+ +L C+H GLV+EG + F SM +++ EHY CMVDLLGR
Sbjct: 547 EEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGR 606
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+G+L++A E ++ MP+EP WGALL CR+HK D+ +L L+P N G YV++
Sbjct: 607 AGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIM 666
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
SNIY+A+ +W + IR MM KG++K G SW+E++ + F G +HP +E+IY+ L
Sbjct: 667 SNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNL 726
Query: 502 DELATKLKAAGFVPTTDHVLF---DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIA 558
L + K G++P T +L DI+EEE++ +L HSE+LAL+ GLI+ K IR+
Sbjct: 727 RHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVF 786
Query: 559 KNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLR+CGDCH A K ISKITGR II RD NRFH F G CSC D+W
Sbjct: 787 KNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 201/388 (51%), Gaps = 15/388 (3%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD---ALKVFD 89
+ +++ C + FQ G H+ ++ G + D ++ T +L LY G L D A K+F+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
++P++N+ +W +I Y + EA +F R+L G+ PD+F+ L C L
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG 193
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
K +H + G + FV +L+D+YAKC + E +VFD+M E++ V+W+S+I A
Sbjct: 194 GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQ 253
Query: 210 NGFPKEALDMFYNMQ--RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
G +AL +F MQ + ++P+ +T +L+ CA+ G + + R N
Sbjct: 254 FGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNI 313
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
++ T L+ MY++CGR+ A ++F M +++ WN+++ G NG + A +F Q++
Sbjct: 314 IVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLN 373
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG----CMVDLLGRSG 383
GI+P+ + +L C +GR+ N F + +E G +VD+ + G
Sbjct: 374 GIKPDCFSLSSMLSSCVSLSDSQKGRELHN-----FIVRNTMEEEGILQVVLVDMYAKCG 428
Query: 384 QLDEAHELI-KSMPMEPNAIVWGALLAG 410
+D A ++ +++ + N +W ++LAG
Sbjct: 429 SMDYAWKVYDQTIKKDRNTALWNSILAG 456
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSH-SLIVKA 59
MI G+ + C + A+ Y M +G P TF +L AC+ + G+R S+
Sbjct: 529 MISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDY 588
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAII 103
++ T +++L G L DA + + +P + V +W A++
Sbjct: 589 NIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 633
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/653 (37%), Positives = 378/653 (57%), Gaps = 51/653 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACARE-HDFQLGVRSHSLIVKA 59
+I GF + + M+++G P FT VLK+C+ +D ++G H I++
Sbjct: 358 LISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRN 417
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD D + S+L+ YV C A K+F + +K+ VSW ++S Y+ G++++++++F
Sbjct: 418 GLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLF 477
Query: 120 RRLLHR----------GLKPD-----------------------SFSIVRVLTACTQLGD 146
R+L + GL + +FSI VL + L
Sbjct: 478 RQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLA--SSLSV 535
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK----------- 195
L K IH V + G + FV SL+D+Y KCG MEKA +F +P++
Sbjct: 536 LGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCD 595
Query: 196 ----DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+ VSWSSM+ GY NG ++AL F M ++ + +T+ V+SACAS G LELG
Sbjct: 596 DAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELG 655
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
++++ + LG+++IDMY KCG + A +F + KD++ V+W +++SG +++
Sbjct: 656 RQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALH 715
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G + A +F + GI PN +FVG+L C+HAGL++EG ++F M V+ + P EH
Sbjct: 716 GQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEH 775
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
+ CMVDL GR+G+L+E E I + + + VW + L+ CR+HK ++ V +L+ LE
Sbjct: 776 FTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELE 835
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P+++G Y+L S+I + H+W +AAKIRS+M +G++K SW+++ VH F++GD SH
Sbjct: 836 PFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSH 895
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P KIYS LDEL +LK G+ V+ D+E+E++Q L HSEKLA+A+G+I+TAP
Sbjct: 896 PQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAP 955
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IR+ KNLRVC DCH IK S++ GREII+RD +RFH F G CSC D+W
Sbjct: 956 GTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 195/424 (45%), Gaps = 53/424 (12%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ ++K G C LLNLY L A K+F++IP +V SWT +ISG+ G
Sbjct: 311 HAKLIKNG--CVGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLS 368
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQ-LGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+ + +F ++ +G+ P+ F++ VL +C+ + D K IHG++ G + + S
Sbjct: 369 ADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNS 428
Query: 172 LVDLYAKC-------------------------------GNMEKARRVFDQMPEKDIVSW 200
++D Y KC G+M+K+ +F Q+P KD SW
Sbjct: 429 ILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASW 488
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
++MI G NG + AL++ Y M T L +SL L LG + + +
Sbjct: 489 NTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLK 548
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK---------------DQVVWNAVV 305
L + + +LIDMY KCG M +A +F+ + + + V W+++V
Sbjct: 549 VGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMV 608
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FS 364
SG NG + A F + ++ + T ++ C AG+++ GRQ + ++
Sbjct: 609 SGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHG 668
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
L + ++D+ + G L++A LI + + N ++W ++++GC LH + A +
Sbjct: 669 LDVFLG--SSIIDMYVKCGSLNDAW-LIFNQAKDRNVVLWTSMISGCALHGQGREAVRLF 725
Query: 425 NQLI 428
+I
Sbjct: 726 ELMI 729
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/600 (38%), Positives = 353/600 (58%), Gaps = 2/600 (0%)
Query: 7 SNDCFQH-AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
S + F H AI + M++ GF P+ FTF VL A + D + G + HS +VK +
Sbjct: 216 SKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNV 275
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
FV +LL+ Y + +A K+F ++P+ + +S+ +I+ G +EE++ +FR L
Sbjct: 276 FVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFT 335
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
F +L+ +L + IH V V SLVD+YAKC +A
Sbjct: 336 RFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEA 395
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
R+F + + V W+++I GY G ++ L +F M R + + T +L ACA+L
Sbjct: 396 NRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANL 455
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
+L LG S + R+ LSN G+ L+DMYAKCG + +A ++F+EM ++ V WNA++
Sbjct: 456 ASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALI 515
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
S + NG A F Q+ G+QPN +F+ +LC C+H GLV+EG Q+FNSM++V+ L
Sbjct: 516 SAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKL 575
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
P EHY MVD+L RSG+ DEA +L+ MP EP+ I+W ++L CR+HK +LA +
Sbjct: 576 EPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAAD 635
Query: 426 QLIALEPW-NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
QL ++ ++ YV +SNIY+A+ +W+ K++ + ++GI+K+ SWVE+ H F
Sbjct: 636 QLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVF 695
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
D SHP +++I KLDEL +++ G+ P + L +++EE K L HSE++A+AF
Sbjct: 696 SANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAF 755
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LI+T I + KNLR C DCH AIK+ISKI REI VRD++RFH F +GSCSCKD+W
Sbjct: 756 ALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 208/410 (50%), Gaps = 2/410 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ ++ F A + M G +P + T +L + H +VK G
Sbjct: 110 LIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVG 169
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V SLL+ Y L A +F + +K+ V++ A+++GY EG +AIN+F
Sbjct: 170 YDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFF 229
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G +P F+ VLTA Q+ D+ + +H +V + NVFVA +L+D Y+K
Sbjct: 230 KMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHD 289
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +AR++F +MPE D +S++ +I A NG +E+L++F +Q + +LS
Sbjct: 290 RIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLS 349
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A+ LE+G S + +S ++G +L+DMYAKC + +A ++F ++ + V
Sbjct: 350 IAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVP 409
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++SG G + +F ++ + I + T+ +L C + + G+Q + +
Sbjct: 410 WTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRII 469
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
R L+ + +VD+ + G + EA ++ + MP+ N++ W AL++
Sbjct: 470 RSGCLSNVFSG-SALVDMYAKCGSIKEALQMFQEMPVR-NSVSWNALISA 517
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 175/336 (52%), Gaps = 2/336 (0%)
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
Y+ G L+ A +FD + ++VV+WT +I GY EA N+F + G+ PD ++
Sbjct: 83 YLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITL 142
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
+L+ T+ ++ +HG+V + G + V SL+D Y K ++ A +F M E
Sbjct: 143 ATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAE 202
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
KD V++++++ GY+ GF +A+++F+ MQ +P +T VL+A + +E G
Sbjct: 203 KDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQV 262
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
SF+ + F+ N + L+D Y+K R+ +A K+F EM + D + +N +++ + NG V
Sbjct: 263 HSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRV 322
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
+ + +F +L+ F LL ++ ++ GRQ +S + V +
Sbjct: 323 EESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQ-IHSQAIVTDAISEVLVGNS 381
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+VD+ + + EA+ + + + +++ W AL++G
Sbjct: 382 LVDMYAKCDKFGEANRIFADLAHQ-SSVPWTALISG 416
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 127/247 (51%), Gaps = 7/247 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+V + ++ + M + T+ +L+ACA LG + HS I+++G
Sbjct: 413 LISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSG 472
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ F ++L+++Y CG + +AL++F ++P +N VSW A+IS Y G+ A+ F
Sbjct: 473 CLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFE 532
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK--GRNVFVATSLVDLYAK 178
+++H GL+P+S S + +L AC+ G + + + K R A S+VD+ +
Sbjct: 533 QMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYA-SMVDMLCR 591
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPEYYT 234
G ++A ++ +MP E D + WSS++ + + +A D +NM+ Y +
Sbjct: 592 SGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVS 651
Query: 235 MVGVLSA 241
M + +A
Sbjct: 652 MSNIYAA 658
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 141/291 (48%), Gaps = 8/291 (2%)
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
++ G P++ + Q GDL A+ + + +NV +++ Y K GN
Sbjct: 33 MIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPH----KNVISTNTMIMGYLKSGN 88
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ AR +FD M ++ +V+W+ +I GYA + EA ++F +M R + P++ T+ +LS
Sbjct: 89 LSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSG 148
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
++ + + + S ++ +L+D Y K + AC +F+ M +KD V +
Sbjct: 149 FTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTF 208
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA+++G S G+ A +F +++ G +P+ TF +L ++ G+Q + + +
Sbjct: 209 NALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVK 268
Query: 362 V-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
F + + ++D + ++ EA +L MP E + I + L+ C
Sbjct: 269 CNFVWNVFVAN--ALLDFYSKHDRIVEARKLFYEMP-EVDGISYNVLITCC 316
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/618 (37%), Positives = 374/618 (60%), Gaps = 14/618 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ N+ A+E+ M EG P FT VL AC+ + G H+ +K G
Sbjct: 186 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 245
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
LD + FV ++L+++Y +C + +VFD + D+ + W A+I+GY + +EA+ +F
Sbjct: 246 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 305
Query: 120 RRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ GL +S ++ V+ AC + G S + IHG+V + G R+ FV +L+D+Y++
Sbjct: 306 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 365
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-----------REN 227
G ++ A R+F +M ++D+V+W++MI GY + ++AL + + MQ R +
Sbjct: 366 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 425
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
LKP T++ +L +CA+L AL G ++ +N ++ +G+ L+DMYAKCG + +
Sbjct: 426 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 485
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
KVF ++ K+ + WN ++ M+G + A + + G++PN TF+ + C+H+G
Sbjct: 486 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 545
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN-AIVWGA 406
+VDEG + F M + + P +HY C+VDLLGR+G++ EA++L+ MP + N A W +
Sbjct: 546 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 605
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
LL R+H ++ E LI LEP + +YVLL+NIYS++ W+ A ++R M ++G+
Sbjct: 606 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 665
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
+K GCSW+E VH+F+ GD+SHP SEK+ L+ L +++ G+VP T VL ++EE
Sbjct: 666 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 725
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
+EK+ L HSEKLA+AFG++ T+P +IR+AKNLRVC DCH A K ISKI REII+RD
Sbjct: 726 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 785
Query: 587 NNRFHCFIEGSCSCKDFW 604
RFH F G+CSC D+W
Sbjct: 786 VRRFHRFKNGTCSCGDYW 803
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 206/414 (49%), Gaps = 11/414 (2%)
Query: 25 GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEF-VKTSLLNLYVHCGYLAD 83
G P N+ FP +LKA A D +LG + H+ + K G D V +L+NLY CG
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
KVFD I ++N VSW ++IS + E A+ FR +L ++P SF++V V+TAC+
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 144 LG---DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
L L K +H Y G+ N F+ +LV +Y K G + ++ + +D+V+W
Sbjct: 125 LPMPEGLMMGKQVHAYGLRKGE-LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 183
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
++++ N EAL+ M E ++P+ +T+ VL AC+ L L G ++ +
Sbjct: 184 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 243
Query: 261 NEFL-SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
N L N +G+ L+DMY C ++ +VF M D+ +WNA+++G S N + K A
Sbjct: 244 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 303
Query: 320 VF-GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SMSRVFSLTPMIEHYGCMVD 377
+F G E G+ N T G++ C +G + R +++ ++D
Sbjct: 304 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN--TLMD 361
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
+ R G++D A + M + + + W ++ G + + A +L+++ LE
Sbjct: 362 MYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 414
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 221/449 (49%), Gaps = 29/449 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR---EHDFQLGVRSHSLIV 57
+I S + ++ A+E + M +E P++FT V+ AC+ +G + H+ +
Sbjct: 83 LISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGL 142
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
+ G + + F+ +L+ +Y G LA + + +++V+W ++S L EA+
Sbjct: 143 RKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 201
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLY 176
R ++ G++PD F+I VL AC+ L L T K +H Y + G N FV ++LVD+Y
Sbjct: 202 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 261
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTM 235
C + RRVFD M ++ I W++MI GY+ N KEAL +F M+ L TM
Sbjct: 262 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 321
Query: 236 VGVLSACASLGALEL-----GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
GV+ AC GA G ++R+ F+ N TL+DMY++ G++ A ++F
Sbjct: 322 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN-----TLMDMYSRLGKIDIAMRIF 376
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE-----------KCGIQPNGNTFVGL 339
+M+D+D V WN +++G + + + A + +++ + ++PN T + +
Sbjct: 377 GKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTI 436
Query: 340 LCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP 399
L C + +G++ ++ + +L + +VD+ + G L + ++ +P +
Sbjct: 437 LPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QK 494
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
N I W ++ +H A +L ++
Sbjct: 495 NVITWNVIIMAYGMHGNGQEAIDLLRMMM 523
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/670 (36%), Positives = 369/670 (55%), Gaps = 66/670 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + F A++ + M +EGF P+ FT VL +CA +G + H +VK G
Sbjct: 318 MIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLG 377
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L V S+L +Y CG A VF+ + ++V SW ++S Y ++G +E A++MF
Sbjct: 378 LSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFE 437
Query: 121 RLLHRG--------------------------------LKPDSFSIVRVLTACTQLGDLS 148
++ R ++PD+F++ VL+AC L L
Sbjct: 438 NMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLK 497
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ----------------- 191
K +H Y+ G + + +L+ YAK G++E ARR+ DQ
Sbjct: 498 MGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEG 557
Query: 192 ----------------MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
M +D+++W++MI GY NG EA+++F +M +P +T+
Sbjct: 558 YVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTL 617
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM-K 294
VLSACASL L+ G R+ + + +I +YA+ G + A +VF ++
Sbjct: 618 AAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICW 677
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
K+ + W +++ ++ +G + A +F ++ + G++P+ T+VG+L C HAG VD+G++
Sbjct: 678 RKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKR 737
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ M + P + HY CMVDL R+G L EAHE I+ MP+ P+ +VWG+LLA CR+
Sbjct: 738 YYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVR 797
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K DLAE +L++++P NSG Y L+N+YSA +WNDAA+I + DKG++K G SW
Sbjct: 798 KNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSW 857
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
V G VH F D HP + IY K E+ ++K AGFVP + VL D+++E K+ L+
Sbjct: 858 THVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLS 917
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFGLI+T K +RI KNLRVC DCH AIK ISK REIIVRD RFH F
Sbjct: 918 RHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFR 977
Query: 595 EGSCSCKDFW 604
+G CSCKD+W
Sbjct: 978 DGYCSCKDYW 987
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 179/416 (43%), Gaps = 66/416 (15%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
+ F SLL+LY G L DA VF ++PD++ VSWT +I G G +A+ F ++
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
G P F++ VL++C + + +H +V + G V VA S++ +Y KCG+ E
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399
Query: 184 KARRVFDQMP-------------------------------EKDIVSWSSMIQGYASNGF 212
AR VF++M E+ IVSW+++I GY NG
Sbjct: 400 TARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGL 459
Query: 213 PKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMER----------N 261
AL F M +++P+ +T+ VLSACA+L L++G S++ R N
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519
Query: 262 EFLS-----------------------NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+S N + T L++ Y K G QA ++F M ++D
Sbjct: 520 ALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDV 579
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ W A++ G NG A +F + G +PN +T +L C +D G+Q
Sbjct: 580 IAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCK 639
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R + ++ + RSG + A + + I W +++ H
Sbjct: 640 AIRSLQ-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQH 694
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 34/280 (12%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
RN F SL+ LYAK G + A VF +MP++D VSW+ MI G +G +A+ F +M
Sbjct: 279 RNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDM 338
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC--- 280
E P +T+ VLS+CA++ A +G F+ + S + +++ MY KC
Sbjct: 339 VSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDA 398
Query: 281 ----------------------------GRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
GRM A +F M ++ V WN +++G + NG
Sbjct: 399 ETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNG 458
Query: 313 YVKVAFGVFGQ-LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
+A F + L ++P+ T +L C + ++ G+Q + + R + +
Sbjct: 459 LDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRT-GMPCSSQI 517
Query: 372 YGCMVDLLGRSGQLDEAHELI-KSMPMEPNAIVWGALLAG 410
++ +SG ++ A ++ +++ + N I + ALL G
Sbjct: 518 MNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEG 557
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/601 (38%), Positives = 362/601 (60%), Gaps = 9/601 (1%)
Query: 8 NDCFQH----AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC 63
N C++ A+ +SM G + T+ ++K C + G R H I G
Sbjct: 259 NHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHP 318
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
F+ L+N+YV L +A +FD +P++NVVSWT +IS Y N + A+ + +
Sbjct: 319 KTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMF 378
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
G+ P+ F+ VL AC +L DL K +H ++ + G +VFV ++L+D+Y+K G +
Sbjct: 379 RDGVMPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELL 435
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
+A +VF +M D V W+S+I +A + EAL ++ +M+R + T+ VL AC
Sbjct: 436 EALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACT 495
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
SL LELG A + + F + +L L+DMY KCG + A +F M KD + W+
Sbjct: 496 SLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWST 553
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++GL+ NG+ A +F ++ G +PN T +G+L C+HAGLV+EG +F SM+ ++
Sbjct: 554 MIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLY 613
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ P EHYGCM+DLLGR+ +LD+ +LI M EP+ + W LL CR + DLA +
Sbjct: 614 GIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYA 673
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
+++ L+P ++G YVLLSNIY+ S +WND A++R M +GI+K GCSW+EV+ +H
Sbjct: 674 AKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHA 733
Query: 484 FLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALA 543
F++GD SHP ++I +L++ +L AG+VP T+ VL D+E E+++ L HSEKLA+
Sbjct: 734 FILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIV 793
Query: 544 FGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
FG+++ + IRI KNL++CGDCH+ KLI+++ R I++RD R+H F +G CSC D+
Sbjct: 794 FGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDY 853
Query: 604 W 604
W
Sbjct: 854 W 854
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 181/336 (53%), Gaps = 9/336 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + A+ M +G +P FTF VL+AC R +D + + HS I+K G
Sbjct: 357 MISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLK---QLHSWIMKVG 413
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+++L+++Y G L +ALKVF ++ + V W +II+ + + +EA+++++
Sbjct: 414 LESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYK 473
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G D ++ VL ACT L L + H +V + + ++ + +L+D+Y KCG
Sbjct: 474 SMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQ--DLILNNALLDMYCKCG 531
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A+ +F++M +KD++SWS+MI G A NGF EAL++F +M+ + KP + T++GVL
Sbjct: 532 SLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLF 591
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G + G W N + +P ++D+ + ++ K+ EM + D
Sbjct: 592 ACSHAGLVNEG-WYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPD 650
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
V W ++ V +A ++ K Q G
Sbjct: 651 VVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTG 686
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/528 (42%), Positives = 343/528 (64%), Gaps = 3/528 (0%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNL-EEAINMFRRLLHRGLK-PDSFSIVR 136
G + A VF IP N+ SW ++I GY L +E I +F++L G P+SF++
Sbjct: 38 GNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAF 97
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
VL AC + +H +V + G G ++FV TSLV+ Y KC + AR+VF++MP ++
Sbjct: 98 VLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRN 157
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASS 256
+V+W++MI G+A G EA+++F MQ+ ++P+ T+V V+SACA GAL++G W +
Sbjct: 158 LVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHA 217
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
++E+ L++ L T L+DMYAKCG + +A +VF M KD W++++ G + +G +
Sbjct: 218 YIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQD 277
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A F Q+ + + P+ TF+ +L C H GLV GR+F++ M F + P +EHYGC V
Sbjct: 278 AIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLE-FGIEPSVEHYGCKV 336
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSG 436
DLL RSG ++EA+ + +M + PNA W +LL GC+ K +L E V L+ LEP N+
Sbjct: 337 DLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAE 396
Query: 437 NYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEK 496
NY+++SN+YS+ +W +++R +M +K I+ + GCS +EVDGVVHEF++GD SHP +
Sbjct: 397 NYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKM 456
Query: 497 IYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIR 556
+ ++E++ +++ +G+ P+ VL + +EEK+ L+ HSE+ A+A+GL+ T VIR
Sbjct: 457 LREFMEEMSMRVRDSGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPIVIR 516
Query: 557 IAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ KNLRVC DCHE IK+ISK+ REIIVRD RFH FI+G+CSCKDFW
Sbjct: 517 VVKNLRVCVDCHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 564
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 206/400 (51%), Gaps = 44/400 (11%)
Query: 1 MIRGFVS-NDCFQHAIEFYNSMRNEGF-LPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
+I+G+ + + I + + G+ +P +FT FVLKACA F G++ HS ++K
Sbjct: 61 LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
G FV+TSL+N Y C + A KVF+++P +N+V+WTA+ISG+ G ++EA+ +
Sbjct: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
FR + G++PD+ ++V V++AC G L W+H Y+ + ++ ++T+LVD+YAK
Sbjct: 181 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAK 240
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG +E+A++VF MP KD +WSSMI G+A +G ++A+D F M + P++ T + V
Sbjct: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAV 300
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK 296
LSACA G + G S M EF P + +D+ + G + +A ++ MK
Sbjct: 301 LSACAHGGLVSRGRRFWSLM--LEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMK-- 356
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
I PN T+ LL GC L++ G
Sbjct: 357 --------------------------------IPPNAATWRSLLMGCKKKKLLNLGEIVA 384
Query: 357 NSMSRVFSLTPM-IEHYGCMVDLLGRSGQLDEAHELIKSM 395
+ L P+ E+Y + +L Q ++ EL K M
Sbjct: 385 RYL---LELEPLNAENYIMISNLYSSLSQWEKMSELRKVM 421
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/618 (37%), Positives = 374/618 (60%), Gaps = 14/618 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ N+ A+E+ M EG P FT VL AC+ + G H+ +K G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
LD + FV ++L+++Y +C + +VFD + D+ + W A+I+GY + +EA+ +F
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 120 RRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ GL +S ++ V+ AC + G S + IHG+V + G R+ FV +L+D+Y++
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-----------REN 227
G ++ A R+F +M ++D+V+W++MI GY + ++AL + + MQ R +
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
LKP T++ +L +CA+L AL G ++ +N ++ +G+ L+DMYAKCG + +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
KVF ++ K+ + WN ++ M+G + A + + G++PN TF+ + C+H+G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN-AIVWGA 406
+VDEG + F M + + P +HY C+VDLLGR+G++ EA++L+ MP + N A W +
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
LL R+H ++ E LI LEP + +YVLL+NIYS++ W+ A ++R M ++G+
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
+K GCSW+E VH+F+ GD+SHP SEK+ L+ L +++ G+VP T VL ++EE
Sbjct: 753 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 812
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
+EK+ L HSEKLA+AFG++ T+P +IR+AKNLRVC DCH A K ISKI REII+RD
Sbjct: 813 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872
Query: 587 NNRFHCFIEGSCSCKDFW 604
RFH F G+CSC D+W
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 217/438 (49%), Gaps = 11/438 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++R V ++ + A+ Y M G P N+ FP +LKA A D +LG + H+ + K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 61 LDCDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D V +L+NLY CG KVFD I ++N VSW ++IS + E A+ F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLG---DLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
R +L ++P SF++V V+TAC+ L L K +H Y G+ N F+ +LV +Y
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-LNSFIINTLVAMY 246
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
K G + ++ + +D+V+W++++ N EAL+ M E ++P+ +T+
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 237 GVLSACASLGALELGVWASSFMERNEFL-SNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
VL AC+ L L G ++ +N L N +G+ L+DMY C ++ +VF M D
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVF-GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+ +WNA+++G S N + K A +F G E G+ N T G++ C +G
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426
Query: 355 FFN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+ R +++ ++D+ R G++D A + M + + + W ++ G
Sbjct: 427 IHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVF 483
Query: 414 HKKTDLAEHVLNQLIALE 431
+ + A +L+++ LE
Sbjct: 484 SEHHEDALLLLHKMQNLE 501
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 157/316 (49%), Gaps = 6/316 (1%)
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
W ++ + L EA+ + ++ G+KPD+++ +L A L D+ K IH +V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 159 EAGKG-RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G G +V VA +LV+LY KCG+ +VFD++ E++ VSW+S+I S + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLG---ALELGVWASSFMERNEFLSNPVLGTTLI 274
+ F M EN++P +T+V V++AC++L L +G ++ R L N + TL+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLV 243
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
MY K G++A + + +D V WN V+S L N + A ++ G++P+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
T +L C+H ++ G++ + SL +VD+ Q+ +
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 395 MPMEPNAIVWGALLAG 410
M + +W A++AG
Sbjct: 364 M-FDRKIGLWNAMIAG 378
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 255/680 (37%), Positives = 374/680 (55%), Gaps = 76/680 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKA 59
MI G+ N+ AIE + + GF P NFTF VL A A D + + H +VK+
Sbjct: 120 MITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKS 179
Query: 60 GLDCDEFVKTSLLNLYVHCGY---------LADALKVFDDIPDKNVVSWTAIISGYINEG 110
G V +LL+++V C +A A K+FD++ +++ +SWT +I+GY+ G
Sbjct: 180 GSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNG 239
Query: 111 NLE-------------------------------EAINMFRRLLHRGLKPDSFSIVRVLT 139
L+ EA+ MFR++ G++ D F+ VL+
Sbjct: 240 ELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLS 299
Query: 140 ACTQLGDLSTAKWIHGYV----NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
AC G K +H Y+ ++ V +L LY KCG +++AR+VF+QMP K
Sbjct: 300 ACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK 359
Query: 196 DIVSWSSMIQGY-------------------------------ASNGFPKEALDMFYNMQ 224
D+VSW++++ GY A NGF +E+L +F M+
Sbjct: 360 DLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMK 419
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
E +P Y G + ACA L AL G + + R F S+ G LI MYAKCG +
Sbjct: 420 SEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVE 479
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A +F M D V WNA+++ L +G+ A +F + K I P+ TF+ +L C+
Sbjct: 480 AAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCS 539
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
HAGLV+EG ++F SMS ++ + P +HY M+DLL R+G+ EA ++I++MP+EP +W
Sbjct: 540 HAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIW 599
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
ALLAGCR+H DL +L L P + G YVLLSN+Y+ +W+D AK+R +M DK
Sbjct: 600 EALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDK 659
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
G++K GCSW+EV+ VH FLV D HP + +Y+ L+EL K++ G++P T VL D+
Sbjct: 660 GVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDM 719
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
E E+K+Y L+ HSEKLA+ FGL+ +R+ KNLR+CGDCH A K +SK+ REI+V
Sbjct: 720 ESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVV 779
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD RFH F G CSC ++W
Sbjct: 780 RDGKRFHHFKNGECSCGNYW 799
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 202/474 (42%), Gaps = 88/474 (18%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M GF P + ++ + D V +H L + D +T+L+ + G
Sbjct: 41 MIASGFKPRGYILNRLIDVYCKSSDL---VSAHHLFDEIR-QPDIVARTTLIAAHSSAGN 96
Query: 81 LADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
A ++F P ++ V + A+I+GY + + AI +FR LL G +PD+F+ VL
Sbjct: 97 SNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVL 156
Query: 139 TACTQL-GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN---------MEKARRV 188
A + D + IH V ++G G V +L+ ++ KC + M AR++
Sbjct: 157 GALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKL 216
Query: 189 FDQMPEKD-------------------------------IVSWSSMIQGYASNGFPKEAL 217
FD+M E+D +V+W++MI GY +GF EAL
Sbjct: 217 FDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEAL 276
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL------GT 271
+MF M ++ + +T VLSACA+ G G +++ R E P L
Sbjct: 277 EMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTE--PRPSLDFSLSVNN 334
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV--------------------------- 304
L +Y KCG++ +A +VF +M KD V WNA+
Sbjct: 335 ALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLT 394
Query: 305 ----VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
+SGL+ NG+ + + +F +++ G +P F G + C + GRQ +
Sbjct: 395 WTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLV 454
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R+ + ++ + + G ++ AH L +MP +++ W A++A H
Sbjct: 455 RL-GFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPY-LDSVSWNAMIAALGQH 506
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 143/342 (41%), Gaps = 82/342 (23%)
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS-------- 199
S A+ +H ++ +G ++ L+D+Y K ++ A +FD++ + DIV+
Sbjct: 32 SIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAH 91
Query: 200 -------------------------WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+++MI GY+ N A+++F ++ R +P+ +T
Sbjct: 92 SSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFT 151
Query: 235 MVGVLSACASLGALE---LGVWASSFMERNEFLSNPVLGTTLIDMYAKCG---------R 282
VL A A + E + + + F+++ + L+ ++ KC
Sbjct: 152 FTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVL--NALLSVFVKCASSPLVSSSSL 209
Query: 283 MAQACKVFREMKDKDQ-------------------------------VVWNAVVSGLSMN 311
MA A K+F EM ++D+ V WNA++SG +
Sbjct: 210 MAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHH 269
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV---FSLTPM 368
G+ A +F ++ GIQ + T+ +L C +AG G+Q + R SL
Sbjct: 270 GFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFS 329
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + L + G++DEA ++ MP++ + + W A+L+G
Sbjct: 330 LSVNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAILSG 370
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/618 (37%), Positives = 374/618 (60%), Gaps = 14/618 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ N+ A+E+ M EG P FT VL AC+ + G H+ +K G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
LD + FV ++L+++Y +C + +VFD + D+ + W A+I+GY + +EA+ +F
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 120 RRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ GL +S ++ V+ AC + G S + IHG+V + G R+ FV +L+D+Y++
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-----------REN 227
G ++ A R+F +M ++D+V+W++MI GY + ++AL + + MQ R +
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
LKP T++ +L +CA+L AL G ++ +N ++ +G+ L+DMYAKCG + +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
KVF ++ K+ + WN ++ M+G + A + + G++PN TF+ + C+H+G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN-AIVWGA 406
+VDEG + F M + + P +HY C+VDLLGR+G++ EA++L+ MP + N A W +
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
LL R+H ++ E LI LEP + +YVLL+NIYS++ W+ A ++R M ++G+
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
+K GCSW+E VH+F+ GD+SHP SEK+ L+ L +++ G+VP T VL ++EE
Sbjct: 753 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 812
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
+EK+ L HSEKLA+AFG++ T+P +IR+AKNLRVC DCH A K ISKI REII+RD
Sbjct: 813 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872
Query: 587 NNRFHCFIEGSCSCKDFW 604
RFH F G+CSC D+W
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 217/438 (49%), Gaps = 11/438 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++R V ++ + A+ Y M G P N+ FP +LKA A D +LG + H+ + K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 61 LDCDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D V +L+NLY CG KVFD I ++N VSW ++IS + E A+ F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLG---DLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
R +L ++P SF++V V+TAC+ L L K +H Y G+ N F+ +LV +Y
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-LNSFIINTLVAMY 246
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
K G + ++ + +D+V+W++++ N EAL+ M E ++P+ +T+
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 237 GVLSACASLGALELGVWASSFMERNEFL-SNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
VL AC+ L L G ++ +N L N +G+ L+DMY C ++ +VF M D
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVF-GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+ +WNA+++G S N + K A +F G E G+ N T G++ C +G
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426
Query: 355 FFN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+ R +++ ++D+ R G++D A + M + + + W ++ G
Sbjct: 427 IHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVF 483
Query: 414 HKKTDLAEHVLNQLIALE 431
+ + A +L+++ LE
Sbjct: 484 SEHHEDALLLLHKMQNLE 501
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 157/316 (49%), Gaps = 6/316 (1%)
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
W ++ + L EA+ + ++ G+KPD+++ +L A L D+ K IH +V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 159 EAGKG-RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G G +V VA +LV+LY KCG+ +VFD++ E++ VSW+S+I S + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLG---ALELGVWASSFMERNEFLSNPVLGTTLI 274
+ F M EN++P +T+V V++AC++L L +G ++ R L N + TL+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLV 243
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
MY K G++A + + +D V WN V+S L N + A ++ G++P+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
T +L C+H ++ G++ + SL +VD+ Q+ +
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 395 MPMEPNAIVWGALLAG 410
M + +W A++AG
Sbjct: 364 M-FDRKIGLWNAMIAG 378
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/604 (38%), Positives = 359/604 (59%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + D + E + M+ EG +P FT+P +L+ C LG + H+ ++K G
Sbjct: 434 MLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTG 493
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +V + L+++Y G LA AL++ +P+ +VVSWTA+I+GY+ EA+ +F
Sbjct: 494 FQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFE 553
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +RG++ D+ ++AC + L + IH AG G ++ + +L+ LYA+CG
Sbjct: 554 EMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCG 613
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++A F+++ +K+ +SW+S++ G A +G+ +EAL +F M R + +T +S
Sbjct: 614 RIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAIS 673
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A ASL ++ G S + + + S + +LI +YAK G ++ A + F +M +++ +
Sbjct: 674 AAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVIS 733
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+++G S +G A +F +++ CGI PN TFVG+L C+H GLV EG +F SM
Sbjct: 734 WNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMF 793
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++ L P EHY C+VDLLGR+GQLD A E IK MP+ +A++W LL+ C +HK ++
Sbjct: 794 KIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIG 853
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + L+ LEP +S YVL+SNIY+ S +W R +M D G++K G SW+EV
Sbjct: 854 ERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNA 913
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F GD HPL+ +IY + L + G+V + +L + E+ +K HSEKL
Sbjct: 914 VHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKL 973
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL++ IR+ KNLRVC DCH IK +SKI+ R IIVRD +RFH F G CSC
Sbjct: 974 AIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSC 1033
Query: 601 KDFW 604
KDFW
Sbjct: 1034 KDFW 1037
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 205/410 (50%), Gaps = 2/410 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N + AI + M PT + VL A + F+LG + H L++K G
Sbjct: 232 MISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ +V L+ LY L A ++F + ++ VS+ ++ISG + +G + A+ +F
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFT 351
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ LKPD ++ +L+AC +G L +H + +AG ++ + SL+DLY+KC
Sbjct: 352 KMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCA 411
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A + F ++IV W+ M+ Y ++ ++F MQ E + P +T +L
Sbjct: 412 DVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILR 471
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C SLGAL LG + + + F N + + LIDMYAK G++A A ++ R + + D V
Sbjct: 472 TCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVS 531
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A+++G + A +F ++E GIQ + F + C + +G+Q ++ S
Sbjct: 532 WTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ-IHAQS 590
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ ++ L R G++ EA+ + + + N I W +L++G
Sbjct: 591 YAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLVSG 639
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 209/417 (50%), Gaps = 7/417 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKAC-AREHDFQLGVRSHSLIVKA 59
MI FV+ + M EG P +TF VLKAC + F + HS
Sbjct: 130 MIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYY 189
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D V L++LY GY+ A KVF+ I K++V+W A+ISG G EEAI +F
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ + P + + VL+A T++ + +H V + G +V LV LY++
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ A R+F M +D VS++S+I G GF AL++F MQR+ LKP+ T+ +L
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACAS+GAL G+ S + ++ +L +L+D+Y+KC + A K F + ++ V
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIV 429
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+WN ++ + +F +F Q++ G+ PN T+ +L CT G + G Q
Sbjct: 430 LWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH--- 486
Query: 360 SRVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ V + Y C ++D+ + GQL A +++ +P E + + W A++AG H
Sbjct: 487 THVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 198/398 (49%), Gaps = 5/398 (1%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
I+ N M G + ++L+ C +R H I K+G D + + SL++
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
Y G A+KVFD+ +++V SW +I ++ + + + +FRR+L G+ P+ ++
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 135 VRVLTACTQLGDLS--TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
VL AC GD++ K +H G + VA L+DLY+K G +E A++VF+ +
Sbjct: 163 AGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI 221
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
KDIV+W +MI G + NG +EA+ +F +M + P Y + VLSA + ELG
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGE 281
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ + F S + L+ +Y++ ++ A ++F M +D V +N+++SGL G
Sbjct: 282 QLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 341
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ A +F ++++ ++P+ T LL C G + +G Q + + ++ I
Sbjct: 342 FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKA-GMSADIILE 400
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G ++DL + ++ AH+ E N ++W +L
Sbjct: 401 GSLLDLYSKCADVETAHKFFLXTETE-NIVLWNVMLVA 437
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 144/349 (41%), Gaps = 42/349 (12%)
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
I + + RG++ + + + +L C G L +H ++++G + SLVD
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y + G+ A +VFD+ + + SW+ MI + + + +F M E + P YT
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 236 VGVLSACASLGALELGVWASSFMERN---EFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
GVL AC G + + R F S+P++ LID+Y+K G + A KVF
Sbjct: 163 AGVLKACVG-GDIAFN-YVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
+ KD V W A++SGLS NG + A +F + I P +L T L + G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 353 RQF----------------------------FNSMSRVFSLTPMIE--HYGCMVDLLGRS 382
Q S R+FS + Y ++ L +
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340
Query: 383 GQLDEAHELIKSMP---MEPNAIVWGALLAGC----RLHKKTDLAEHVL 424
G D A EL M ++P+ I +LL+ C LHK L H +
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/612 (40%), Positives = 366/612 (59%), Gaps = 11/612 (1%)
Query: 1 MIRGF-VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI GF + + M+N+ P + T VL A A+ + + G H V+
Sbjct: 191 MISGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRR 249
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-KNVVSWTAIISGYINEGNLEEAINM 118
G D V T +L++Y C + A ++FD + KN V+W+A++ Y+ + EA+ +
Sbjct: 250 GFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALEL 309
Query: 119 FRRLLHRGLKPD-----SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLV 173
F +LL LK D + ++ V+ C L DLST +H Y ++G ++ V +L+
Sbjct: 310 FCQLLM--LKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLL 367
Query: 174 DLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
+YAKCG + A R F++M +D VS++++I GY NG +E L MF MQ + PE
Sbjct: 368 SMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKA 427
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T+ VL ACA L L G + + F ++ ++ LIDMYAKCG++ A KVF M
Sbjct: 428 TLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRM 487
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
+ V WN ++ ++G A +F ++ G++P+ TF+ L+ C+H+GLV EG+
Sbjct: 488 HKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGK 547
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+FN+M++ F + P +EHY CMVDLL R+G E H I+ MP+EP+ VWGALL+ CR+
Sbjct: 548 YWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRV 607
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
+K +L E V ++ L P ++GN+VLLSN+YSA +W+DAA++R ++G +K GCS
Sbjct: 608 YKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCS 667
Query: 474 WVEVDGVVHEFLVGD-NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF 532
W+E+ GVVH FL G SHP +I +KLDEL ++K G+ + +V D+EEEEK+
Sbjct: 668 WIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERV 727
Query: 533 LACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
L HSEKLA+AFG+++ +P I + KNLRVCGDCH AIK IS +T R+I VRD +RFH
Sbjct: 728 LLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHH 787
Query: 593 FIEGSCSCKDFW 604
F +G C+C DFW
Sbjct: 788 FKDGICNCGDFW 799
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 222/420 (52%), Gaps = 10/420 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + N ++ AI+ Y M G P FTFPFVLKAC+ + G H I +
Sbjct: 90 LIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLR 149
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY-INEGNLEEAINMF 119
L+ + +V T+L++ Y CG L DA +VFD + ++VV+W ++ISG+ ++EG+ +E +
Sbjct: 150 LESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLL 209
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ + + P+S +IV VL A Q+ L K IHG+ G +V V T ++D+Y KC
Sbjct: 210 VQ-MQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKC 268
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYN---MQRENLKPEYYTM 235
++ ARR+FD M K+ V+WS+M+ Y F +EAL++F ++ + + T+
Sbjct: 269 QCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTL 328
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
V+ CA+L L G + ++ F+ + ++G TL+ MYAKCG + A + F EM
Sbjct: 329 ATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDL 388
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH-AGLVDEGRQ 354
+D V + A++SG NG + +F +++ GI P T +L C H AGL
Sbjct: 389 RDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCS 448
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ F+ MI ++D+ + G++D A ++ M + + W ++ +H
Sbjct: 449 HCYAIICGFTADTMI--CNALIDMYAKCGKIDTARKVFDRMH-KRGIVSWNTMIIAYGIH 505
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 149/258 (57%), Gaps = 5/258 (1%)
Query: 71 LLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
L++LY+ C L A VFD +P KNVV W +I Y G EEAI+++ ++L G+
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
P+ F+ VL AC+ L + S + IH + NV+V+T+LVD YAKCG ++ A+ V
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176
Query: 189 FDQMPEKDIVSWSSMIQGYA-SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
FD+M ++D+V+W+SMI G++ G E + MQ ++ P T+VGVL A A + +
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQ-NDVSPNSSTIVGVLPAVAQVNS 235
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD-KDQVVWNAVVS 306
L G F R F+ + V+GT ++D+Y KC + A ++F M K++V W+A+V
Sbjct: 236 LRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVG 295
Query: 307 GLSMNGYVKVAFGVFGQL 324
+ +++ A +F QL
Sbjct: 296 AYVVCDFMREALELFCQL 313
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Query: 273 LIDMYAKCGRMAQACKVFREM--KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
L+D+Y C + A VF +M + K+ V+WN ++ + NG + A ++ ++ GI
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
PN TF +L C+ EGR+ + R+ L + +VD + G LD+A E
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRL-RLESNVYVSTALVDFYAKCGCLDDAKE 175
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHK 415
+ M + + + W ++++G LH+
Sbjct: 176 VFDKMH-KRDVVAWNSMISGFSLHE 199
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/591 (37%), Positives = 348/591 (58%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
+ E + M+ G P FT+P +L+ C +LG + HSL +K G + D +V L++
Sbjct: 330 SFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLID 389
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y L A K+ + + ++VVSWT++I+GY+ EEA+ F+ + G+ PD+
Sbjct: 390 MYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+ +AC + + IH V +G ++ + +LV+LYA+CG E+A +F ++
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREID 509
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
KD ++W+ +I G+ + ++AL +F M + K +T + +SA A+L ++ G
Sbjct: 510 HKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQ 569
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ S + LI +Y KCG + A +F EM +++V WN +++ S +G
Sbjct: 570 VHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGR 629
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
A +F Q+++ G++PN TF+G+L C+H GLV+EG +F SMS V+ L P+ +HY
Sbjct: 630 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYA 689
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
C+VD+LGR+GQLD A + MP+ NA++W LL+ C++HK ++ E L+ LEP
Sbjct: 690 CVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPH 749
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPL 493
+S +YVLLSN Y+ + KW + ++R MM D+GI+K G SW+EV VH F VGD HPL
Sbjct: 750 DSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPL 809
Query: 494 SEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKD 553
S++IY L EL +L G+ ++ + E+E+K HSEKLA+AFGL+T P
Sbjct: 810 SDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCI 869
Query: 554 VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+R+ KNLRVC DCH +K S++T REI++RD RFH F GSCSC D+W
Sbjct: 870 PLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 216/414 (52%), Gaps = 2/414 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A++ ++ M+ G P T +L ACA D Q G + HS ++KAG+ D + SLL+
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
LYV CG + A +F+ NVV W ++ Y +L ++ +F ++ G+ P+ F+
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFT 348
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+L CT G + + IH + G +++V+ L+D+Y+K ++KAR++ + +
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLE 408
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
++D+VSW+SMI GY + F +EAL F MQ + P+ + SACA + A+ G+
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ 468
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ + + + ++ + TL+++YA+CGR +A +FRE+ KD++ WN ++SG +
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRL 528
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
+ A VF ++ + G + N TF+ + + + +G+Q + T E
Sbjct: 529 YEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVAN 587
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
++ L G+ G +++A + M + N + W ++ C H + A + +Q+
Sbjct: 588 ALISLYGKCGSIEDAKMIFSEMSLR-NEVSWNTIITSCSQHGRGLEALDLFDQM 640
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 200/412 (48%), Gaps = 6/412 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ + A Y+ M +PT + VL AC + F G H+ + K
Sbjct: 115 MLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA 174
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +L+ LY+ G A +VF D+ + V++ +ISG+ G+ E A+ +F
Sbjct: 175 FCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFD 234
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GL+PD ++ +L AC +GDL K +H Y+ +AG + SL+DLY KCG
Sbjct: 235 EMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCG 294
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A +F+ ++V W+ M+ Y ++ ++F MQ + P +T +L
Sbjct: 295 DIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILR 354
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C G +ELG S +N F S+ + LIDMY+K + +A K+ ++ +D V
Sbjct: 355 TCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVS 414
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++++G + + + A F +++ CG+ P+ +GL + + RQ +
Sbjct: 415 WTSMIAGYVQHDFCEEALATFKEMQDCGVWPDN---IGLASAASACAGIKAMRQGLQIHA 471
Query: 361 RVF--SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
RV+ I + +V+L R G+ +EA L + + + I W L++G
Sbjct: 472 RVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREID-HKDEITWNGLISG 522
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 200/389 (51%), Gaps = 6/389 (1%)
Query: 37 LKAC-AREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
L+AC R + + L + H+ V GL D + L++LY G + A +VF ++ ++
Sbjct: 49 LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRD 108
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
VSW A++SGY G +EA ++ ++ + P + + VL+ACT+ + + IH
Sbjct: 109 HVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHA 168
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
V + FV +L+ LY G+ + A RVF M D V+++++I G+A G +
Sbjct: 169 QVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGEC 228
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL +F MQ L+P+ T+ +L+ACAS+G L+ G S++ + + + +L+D
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y KCG + A +F + V+WN ++ + +F +FGQ++ GI PN T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFT 348
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
+ +L CT G ++ G Q +S+S + G ++D+ + LD+A ++++ M
Sbjct: 349 YPCILRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILE-M 406
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ + + W +++AG H D E L
Sbjct: 407 LEKRDVVSWTSMIAGYVQH---DFCEEAL 432
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V +D + A+ + M++ G P N ACA + G++ H+ + +G
Sbjct: 418 MIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + +L+NLY CG +A +F +I K+ ++W +ISG+ E+A+ +F
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFM 537
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G K + F+ + ++A L D+ K +HG + G VA +L+ LY KCG
Sbjct: 538 KMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCG 597
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A+ +F +M ++ VSW+++I + +G EALD+F M++E LKP T +GVL+
Sbjct: 598 SIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLA 657
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ +G +E G+ M N + NP+ ++D+ + G++ +A + EM +
Sbjct: 658 ACSHVGLVEEGLSYFKSMS-NVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITAN 716
Query: 298 QVVWNAVVSGLSMNGYVKV 316
++W ++S ++ +++
Sbjct: 717 AMIWRTLLSACKVHKNIEI 735
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/607 (37%), Positives = 361/607 (59%), Gaps = 36/607 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
+IR ++ + A+ + SMR G P ++T+P LK+C+ D LG++ HS + K
Sbjct: 92 LIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAK 151
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
LD + +V S +++Y CG DA +VFD +P ++VVSW A+I+G+ G + AI +
Sbjct: 152 LRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEV 211
Query: 119 FRR-LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
F++ ++ +G PD+ ++ +L A +G+ A
Sbjct: 212 FKQFVVLQGSMPDAGTMAGILPA---MGN------------------------------A 238
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
K ++ RRVFD M K+++SW++M+ YA+N F +A+++F M+++ ++P+ T+
Sbjct: 239 KPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLAT 298
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
VL C L A +G ++R N +L L+DMYA CG + A ++F M +D
Sbjct: 299 VLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARD 358
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+ W +++S +G+ + A +F ++ G++P+ FV +L C+HAGL+ +G+ +F+
Sbjct: 359 VISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFD 418
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
SM+ + + P EHY CMVDLLGR+G ++EA++ I +M +EPN VWGALL CR+H
Sbjct: 419 SMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNM 478
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
D+ + L +L P +G YVLLSN+Y+ + +W D +RS+M +KGI+K G S VE+
Sbjct: 479 DIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVEL 538
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
VH F +GD HP SE IY KLDEL K++ G+ P + L D+EEE+K+ L+ HS
Sbjct: 539 GDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHS 598
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EKLA+AF L+ T+P +IR+ NLR C DCH A KLIS IT REI+++D NR H ++G
Sbjct: 599 EKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGV 658
Query: 598 CSCKDFW 604
CSC D+W
Sbjct: 659 CSCGDYW 665
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/559 (41%), Positives = 346/559 (61%), Gaps = 8/559 (1%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNL--YVHCGYLADALKVFDDIPDKNVVS---WTAIISGYI 107
H+ I+K GL + V T ++ +H A + +F D + + +I Y
Sbjct: 49 HTHILKLGLHNNPLVLTKFASISSLIHATDYAASF-LFSAEADTRLYDAFLFNTLIRAYA 107
Query: 108 NEGN-LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNV 166
G+ ++A+ ++ +LH + P+ F+ VL AC L L+ + +HG V + G ++
Sbjct: 108 QTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDI 167
Query: 167 FVATSLVDLYAKC-GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
V ++V +Y+ C G + AR+VFD+MP+ D V+WS+MI GYA G EA+ +F MQ
Sbjct: 168 HVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQM 227
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
+ P+ TMV +LSAC LGALELG W +++ER+E + LIDM+AKCG +++
Sbjct: 228 AEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISK 287
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
A K+FR M +K V W +V+ G++M+G + A +F ++ G+ P+ F+GLL C+H
Sbjct: 288 ALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSH 347
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
+GLV+ GR++F SM + + L P IEHYGCMVD+ R+G + EA E +++MP+EPN ++
Sbjct: 348 SGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILR 407
Query: 406 ALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKG 465
L++ CR H + L E + L+ EP + NYVLLSNIY+ + W KIR +M KG
Sbjct: 408 TLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKG 467
Query: 466 IQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIE 525
++K+ G + +E+D ++EF+ GD SH ++IY +DE+ ++K +G+ P+T VL DI
Sbjct: 468 MKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDIN 527
Query: 526 EEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVR 585
EE+K+ L HSEKLA+AFGL+ T P IRI KNLRVC DCH A K ISKI REII+R
Sbjct: 528 EEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMR 587
Query: 586 DNNRFHCFIEGSCSCKDFW 604
D NRFH F G CSC DFW
Sbjct: 588 DRNRFHHFKSGQCSCGDFW 606
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 174/306 (56%), Gaps = 3/306 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ Y M ++ LP FT+PFVLKACA LG H +VK G DCD V+ ++++
Sbjct: 116 ALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVH 175
Query: 74 LYVHC-GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
+Y C G + A KVFD++P + V+W+A+I GY G EA+ +FR + + PD
Sbjct: 176 MYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEI 235
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++V +L+ACT LG L KWI Y+ + V V+ +L+D++AKCG++ KA ++F M
Sbjct: 236 TMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAM 295
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
EK IVSW+S+I G A +G +EA +F M + P+ +G+LSAC+ G +E G
Sbjct: 296 NEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGR 355
Query: 253 -WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSM 310
+ S M++ + + ++DMY + G + +A + R M + + V+ +VS
Sbjct: 356 EYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRG 415
Query: 311 NGYVKV 316
+G K+
Sbjct: 416 HGEFKL 421
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 38/298 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ A+ + M+ P T +L AC +LG + I +
Sbjct: 205 MIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHE 264
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V +L++++ CG ++ ALK+F + +K +VSWT++I G G +EA +F
Sbjct: 265 IHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFE 324
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ PD + + +L+AC+ G + +GR F G
Sbjct: 325 EMTSSGVAPDDVAFIGLLSACSHSGLVE-------------RGREYF------------G 359
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M K ++ + I + M+ Y G KEAL+ NM ++P + ++S
Sbjct: 360 SMMKKYKLVPK-----IEHYGCMVDMYCRTGLVKEALEFVRNMP---IEPNPVILRTLVS 411
Query: 241 ACASLGALELGVWASSFMERNEFL--SNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
AC G +LG + + ++E L SN VL L ++YAK + K+ M+ K
Sbjct: 412 ACRGHGEFKLGEKITKLLMKHEPLHESNYVL---LSNIYAKTLSWEKKTKIREVMEVK 466
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/608 (39%), Positives = 358/608 (58%), Gaps = 5/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N F A++ + MR P+NFT L +CA +G + H +K G
Sbjct: 461 MITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLG 520
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN-EGNLEEAINMF 119
LD D V +LL LY CGY+ + K F + D + VSW ++I + E ++ EA+ F
Sbjct: 521 LDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESF 580
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G P+ + + +L A + L K IH V + + + +L+ Y KC
Sbjct: 581 LVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKC 640
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G+M +F +M ++ D VSW+SMI GY N +A+DM + M ++ + + +T V
Sbjct: 641 GDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATV 700
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
LSACA++ LE G+ R S+ V+G+ L+DMYAKCGR+ A + F M ++
Sbjct: 701 LSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNL 760
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WN+++SG + +G+ + +F Q++ G P+ TFVG+L C+HAGLV+EG F+S
Sbjct: 761 YSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDS 820
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLH-KK 416
MS ++ L P +EH+ CMVDLLGR G+L++ + + MP++PN ++W +L A CR + +
Sbjct: 821 MSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRN 880
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
T L L+ +EP N+ NY+LLSN+Y++ KW+D AK R M ++K GCSWV
Sbjct: 881 TALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVT 940
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
+ VH F+ GD SHP + IY KL EL K++ AG++P T L+D+E E K+ L+ H
Sbjct: 941 MKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYH 1000
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEK+A+AF ++T K IRI KNLRVCGDCH A K IS+I R+I++RD+NRFH F G
Sbjct: 1001 SEKIAVAF-VLTRPSKMPIRILKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENG 1059
Query: 597 SCSCKDFW 604
CSC DFW
Sbjct: 1060 KCSCGDFW 1067
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 206/422 (48%), Gaps = 12/422 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS----HSLI 56
+I G V + A+E + M++ L N ++ +L A H + G R H+ +
Sbjct: 356 LIIGLVRQKRGEEAVELFMEMKDSVELNPN-SYMIILTAFPEFHVLENGKRKGSEVHAFL 414
Query: 57 VKAGL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
+++GL + + L+N+Y CG + DA VF + +K+ V+W ++I+G EA
Sbjct: 415 IRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEA 474
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+ F+ + L P +F+++ L++C LG +S + +H + G +V V+ +L+ L
Sbjct: 475 VKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLAL 534
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK--EALDMFYNMQRENLKPEYY 233
Y +CG +++ ++ F M + D VSW+S+I G ++ P EA++ F M R P
Sbjct: 535 YGECGYVKECQKAFSLMLDYDHVSWNSLI-GALADSEPSMLEAVESFLVMMRAGWDPNRV 593
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T + +L+A +SL ELG + + + ++ + L+ Y KCG M +F M
Sbjct: 594 TFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRM 653
Query: 294 KDK-DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
D+ D+V WN+++SG N + A + + + G + +G TF +L C ++ G
Sbjct: 654 SDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERG 713
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+ R L I +VD+ + G++D A + MP N W ++++G
Sbjct: 714 MEVHGCSVRA-CLESDIVIGSALVDMYAKCGRIDYASRFFEMMPAR-NLYSWNSMISGYA 771
Query: 413 LH 414
H
Sbjct: 772 RH 773
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 226/462 (48%), Gaps = 20/462 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR--EHDFQLGVRSHSLIVK 58
+I G+ N A E + M ++GF+P ++ F V++AC E+ + G++ H L+ K
Sbjct: 145 LISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSK 204
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLAD-ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
D L+++Y + + D A + FD I +N+VS ++IS Y G+ A +
Sbjct: 205 TQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFD 264
Query: 118 MF----RRLLHRGLKPDSFSIVRVLTACTQLGD--LSTAKWIHGYVNEAGKGRNVFVATS 171
+F + ++ GLKP+ ++ +++A L + L + + V ++G +++V ++
Sbjct: 265 IFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSA 324
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKP 230
LV +AK G++ A+ +F +M +++VS + +I G +EA+++F M+ L P
Sbjct: 325 LVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNP 384
Query: 231 EYYTMVGVLSACASLGALELGVWASS----FMERNEFLSNPV-LGTTLIDMYAKCGRMAQ 285
Y + +L+A LE G S F+ R+ L+ + +G LI+MYAKCG +
Sbjct: 385 NSYMI--ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAIND 442
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
AC VFR M +KD V WN++++GL N A F ++ + + P+ T + L C
Sbjct: 443 ACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCAS 502
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
G + G Q ++ L + ++ L G G + E + S+ ++ + + W
Sbjct: 503 LGWISVGEQLHCEGLKL-GLDLDVSVSNALLALYGECGYVKECQKAF-SLMLDYDHVSWN 560
Query: 406 ALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
+L+ G + + E V + L+ + N V I +A
Sbjct: 561 SLI-GALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAA 601
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 216/433 (49%), Gaps = 21/433 (4%)
Query: 37 LKACAREHDFQLGVRS----HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+++ A+ + + G + H + K G D F+ +L+N+Y G L KVFD++P
Sbjct: 76 IESLAQRYRYSCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMP 135
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD--LSTA 150
+N+VSW+ +ISGY EA +FR+++ G P+ ++ V+ AC + G+ L
Sbjct: 136 LRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFG 195
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKC-GNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
IHG +++ +V + L+ +Y G ++ ARR FD + +++VS +SMI Y
Sbjct: 196 MQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQ 255
Query: 210 NGFPKEALDMFYNMQRE----NLKPEYYTMVGVLSACASLG--ALELGVWASSFMERNEF 263
G A D+F MQ+E LKP YT ++SA SL L L + +E++ F
Sbjct: 256 RGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGF 315
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
L + +G+ L+ +AK G + A +F++M ++ V N ++ GL + A +F +
Sbjct: 316 LHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFME 375
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGR----QFFNSMSRVFSLTPMIEHYGCMVDLL 379
+ K ++ N N+++ +L +++ G+ + + R L I ++++
Sbjct: 376 M-KDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMY 434
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
+ G +++A + + M +++ W +++ G +K+ A ++ E + S N+
Sbjct: 435 AKCGAINDACVVFRLMD-NKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPS-NFT 492
Query: 440 LLSNIYS-ASHKW 451
++S + S AS W
Sbjct: 493 MISALSSCASLGW 505
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/583 (38%), Positives = 347/583 (59%), Gaps = 6/583 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT T ++ + AR + + H L+V G D D F+ T L+N++ + +A KV
Sbjct: 67 PTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKV 126
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ---- 143
FD + + W A+ G + + ++ R+ G+ D F+ +L AC
Sbjct: 127 FDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECL 186
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+ L K IH ++ G G +V V T+L+D+YA+ G + A VFD+MP K++VSWS+M
Sbjct: 187 VSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAM 246
Query: 204 IQGYASNGFPKEALDMFYNM--QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
I YA NG P EAL++F M + P TMV VL ACA+ ALE G +++ R
Sbjct: 247 IACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRR 306
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
S + + LI MYA+CG++ +F M KD V+WN+++S ++GY + A +F
Sbjct: 307 GLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIF 366
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ G P+ +F+ +L C+H GLV+EG++ F SM + + P +EHY CMVDLLGR
Sbjct: 367 EEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGR 426
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+ +LDEA ++I+ + +EP VWG+LL CR+H +LAE +L LEP N+GNYVLL
Sbjct: 427 ANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLL 486
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
++IY+ + W++ +++ ++ + +QK+ G SW+EV ++ F D +P E++++ L
Sbjct: 487 ADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALL 546
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
L+ ++K G+ P T VL+D+++EEK+ + HSEKLA+AFGLI T+ D IRI KNL
Sbjct: 547 VNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNL 606
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH K ISK REI+VRD NRFH F +G CSC D+W
Sbjct: 607 RLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 181/350 (51%), Gaps = 13/350 (3%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREH----DFQLGVRSHSLIVKAGLDCDEFVKTS 70
+E Y M G FT+ ++LKAC Q G H+ I++ G V T+
Sbjct: 155 LELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTT 214
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL---HRGL 127
L+++Y G ++ A VFD++P KNVVSW+A+I+ Y G EA+ +FR ++ H +
Sbjct: 215 LMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSV 274
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
P+S ++V VL AC L K IH Y+ G + V ++L+ +YA+CG +E +
Sbjct: 275 -PNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQL 333
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
+FD+M +KD+V W+S+I Y +G+ ++A+ +F M P + + + VL AC+ G
Sbjct: 334 IFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGL 393
Query: 248 LELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
+E G M + + V ++D+ + R+ +A K+ +++ + VW +++
Sbjct: 394 VEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLL 453
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQ 354
++ +V++A +L K ++P N +V L A + DE ++
Sbjct: 454 GACRIHCHVELAERASKRLFK--LEPTNAGNYVLLADIYAEAEMWDEVKR 501
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 186/377 (49%), Gaps = 20/377 (5%)
Query: 102 IISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG 161
+I +GNL++A+ LL P + ++ + + LS A +H + + G
Sbjct: 44 LIQSLCKQGNLKQAL----YLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGG 99
Query: 162 KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
++ F+AT L++++++ ++ AR+VFD+ ++ I W+++ + A G + L+++
Sbjct: 100 FDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYP 159
Query: 222 NMQRENLKPEYYTMVGVLSACAS----LGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
M + + +T +L AC + + L+ G + + R+ + ++ + TTL+DMY
Sbjct: 160 RMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMY 219
Query: 278 AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ--LEKCGIQPNGNT 335
A+ G ++ A VF EM K+ V W+A+++ + NG A +F + L PN T
Sbjct: 220 ARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVT 279
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
V +L C +++G+ + R + S+ P+I ++ + R G+L E+ +LI
Sbjct: 280 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVI---SALITMYARCGKL-ESGQLIF 335
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKW-- 451
+ + ++W +L++ LH A + ++I ++ + +S + + SH
Sbjct: 336 DRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMID-HGFSPSHISFISVLGACSHTGLV 394
Query: 452 NDAAKI-RSMMGDKGIQ 467
+ K+ SM+ + GIQ
Sbjct: 395 EEGKKLFESMVKEHGIQ 411
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI + N A+E + M +P + T VL+ACA + G H+ I++
Sbjct: 246 MIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILR 305
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
GLD V ++L+ +Y CG L +FD + K+VV W ++IS Y G +AI +
Sbjct: 306 RGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKI 365
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI-HGYVNEAGKGRNVFVATSLVDLYA 177
F ++ G P S + VL AC+ G + K + V E G +V +VDL
Sbjct: 366 FEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLG 425
Query: 178 KCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ +++A ++ + + E W S++
Sbjct: 426 RANRLDEAAKIIEDLRIEPGPKVWGSLL 453
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/604 (37%), Positives = 356/604 (58%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G SN + A+E + M EG + T V+ AC + H +G H V+ G
Sbjct: 56 IIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTG 115
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + + +LL++Y +C K+F ++ KNVVSWTA+I+ Y G+ ++ +F+
Sbjct: 116 LISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQ 175
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++PD F+I L A L K +HGY G + VA +L+++Y KCG
Sbjct: 176 EMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCG 235
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
ME+AR +FD + +KD +SW+++I GY+ + EA +F M + L+P TM +L
Sbjct: 236 YMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILP 294
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A ASL +LE G ++ R +L + + L+DMY KCG + A ++F + +K+ +
Sbjct: 295 AAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLIS 354
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G M+G + A +F Q++ GIQP+ +F +L C+H+GL DEG +FFN+M
Sbjct: 355 WTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMR 414
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P ++HY CMVDLL +G L EA+E I++MP+EP++ +W +LL GCR+H+ LA
Sbjct: 415 NEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLA 474
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V + LEP N+G YVLL+NIY+ + +W K+++ +G +G+++ GCSW+EV G
Sbjct: 475 EKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGK 534
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
H F + +HP +I LD++A +++ G P + L ++ L HS KL
Sbjct: 535 AHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKL 594
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFG++ + IR+ KN RVC CHEA K ISK+ GREII+RD+NRFH F EG CSC
Sbjct: 595 AVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSC 654
Query: 601 KDFW 604
+ +W
Sbjct: 655 RGYW 658
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 191/403 (47%), Gaps = 8/403 (1%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G+ H +VK G V +L++ Y + DAL VFD++P ++++SW +II G +
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
G ++A+ +F R+ G + DS +++ V+ AC Q +HGY G +
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
+L+D+Y+ C + ++F M +K++VSW++MI Y G + +F M E +
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+P+ + + L A A +L+ G + RN + L++MY KCG M +A
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+F + KD + WN ++ G S + AF +F ++ ++PN T +L
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSS 301
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
++ GR+ R L +VD+ + G L A L M N I W ++
Sbjct: 302 LERGREMHAYAVRRGYLEDNFV-ANALVDMYVKCGALLLARRLF-DMLTNKNLISWTIMI 359
Query: 409 AGCRLHKKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSASH 449
AG +H + A + Q+ ++P ++G++ + +Y+ SH
Sbjct: 360 AGYGMHGRGRDAIALFEQMKGSGIQP-DAGSFSAI--LYACSH 399
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 7/309 (2%)
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+HGY+ + G G V +L+ YAK +E A VFD+MP++DI+SW+S+I G ASNG
Sbjct: 6 VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGL 65
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+A+++F M E + + T++ V+ AC +G + R +S LG
Sbjct: 66 YDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNA 125
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+DMY+ C K+FR M+ K+ V W A+++ + G+ G+F ++ GI+P+
Sbjct: 126 LLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPD 185
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
L + G+ R + ++ ++++ + G ++EA I
Sbjct: 186 VFAITSALDAFAGNESLKHGKSVHGYAIRN-GIEEVLPVANALMEMYVKCGYMEEA-RFI 243
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ-LIALEPWNSGNYVLLSNIYSASHKW 451
+ + I W L+ G + A + N+ L+ L P N V ++ I A+
Sbjct: 244 FDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRP----NAVTMACILPAAASL 299
Query: 452 NDAAKIRSM 460
+ + R M
Sbjct: 300 SSLERGREM 308
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/605 (38%), Positives = 348/605 (57%), Gaps = 38/605 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR +V+N + ++ + +M P ++TFP VLKAC+ +G + H K G
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L FV L+++Y CG+L++A V D++ ++VVSW +++ GY ++A+ + R
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + D+ ++ +L A +
Sbjct: 231 EMESVKISHDAGTMASLLPAVSN---------------------------------TTTE 257
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ + +F +M +K +VSW+ MI Y N P EA++++ M+ + +P+ ++ VL
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC AL LG ++ER + + N +L LIDMYAKCG + +A VF MK +D V
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++S +G A +F +L+ G+ P+ FV L C+HAGL++EGR F M+
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ +TP +EH CMVDLLGR+G++ EA+ I+ M MEPN VWGALL CR+H TD+
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIG 497
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
++L L P SG YVLLSNIY+ + +W + IR++M KG++K G S VEV+ +
Sbjct: 498 LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRI 557
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H FLVGD SHP S++IY +LD L K+K G+VP ++ L D+EEE+K+ LA HSEKL
Sbjct: 558 IHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKL 617
Query: 541 ALAFGLITTAPKD-----VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
A+ F L+ T ++ IRI KNLR+CGDCH A KLIS+IT REII+RD NRFH F
Sbjct: 618 AIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRF 677
Query: 596 GSCSC 600
G CSC
Sbjct: 678 GVCSC 682
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 6/269 (2%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D+ T + +H + N + L+ YA ++ AR+VFD++PE++++ + MI+
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
Y +NGF E + +F M N++P++YT VL AC+ G + +G + S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+G L+ MY KCG +++A V EM +D V WN++V G + N A V ++E
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
I + T LL ++ E + M ++ + M+ + ++
Sbjct: 234 SVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS-WNVMIGVYMKNAMP 290
Query: 386 DEAHELIKSMP---MEPNAIVWGALLAGC 411
EA EL M EP+A+ ++L C
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPAC 319
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/569 (41%), Positives = 355/569 (62%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L++ AR G+ H+ I++ GL D L+N+Y CG + A K+FD++P ++
Sbjct: 53 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+VSW ++ + G+ E+A+ +F ++ G F++ V+ AC + K +HG
Sbjct: 113 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG 172
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ + NVFV T+L+D+YAKCG ++ A VF+ MPE+ V+WSSM+ GY N +E
Sbjct: 173 FALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEE 232
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL +F+ Q L+ +T+ LSACA+ AL G + + SN + ++LID
Sbjct: 233 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLID 292
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MYAKCG + +A VF +++K+ V+WNA++SG S + A F ++++ GI PN T
Sbjct: 293 MYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 352
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
++ +L C+H GLV++GR++F+ M RV +++P + HY CMVD+LGR+G L EA + I M
Sbjct: 353 YISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRM 412
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
P + A +WG+LLA CR+++ +LAE L +EP N+GN+VLLSNIY+A+ +W + A
Sbjct: 413 PFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVA 472
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
+ R+++ + +K RG SW+E+ VH F+VG+ +HP +IY KL++L ++K G+
Sbjct: 473 RARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKA 532
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
T+H L D+EE KQ L HSEKLAL FG++ IRI KNLR+CGDCH +KL S
Sbjct: 533 KTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLAS 592
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IT REIIVRD NRFH F G CSC +FW
Sbjct: 593 SITEREIIVRDTNRFHHFKNGYCSCGEFW 621
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 165/301 (54%), Gaps = 3/301 (0%)
Query: 9 DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK 68
DC + A+ + M+ EG + FT V+ ACA + + H +K LD + FV
Sbjct: 128 DC-EKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVG 186
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T+LL++Y CG + DA VF+ +P+++ V+W+++++GY+ EEA+ +F R GL+
Sbjct: 187 TALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLE 246
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
+ F+I L+AC L K + + G G N+FV +SL+D+YAKCG +E+A V
Sbjct: 247 HNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTV 306
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F + EK++V W++++ G++ + EA+ F MQ+ + P T + VLSAC+ LG +
Sbjct: 307 FSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLV 366
Query: 249 ELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVS 306
E G M R +S VL + ++D+ + G + +A M D +W ++++
Sbjct: 367 EKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 426
Query: 307 G 307
Sbjct: 427 S 427
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+V N+ ++ A+ ++ + G FT L ACA G + ++ K G
Sbjct: 220 MVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTG 279
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV +SL+++Y CG + +A VF + +KNVV W AI+SG+ EA+ F
Sbjct: 280 IGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFE 339
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G+ P+ + + VL+AC+ LG + K+ + NV + +VD+ +
Sbjct: 340 KMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRA 399
Query: 180 GNMEKARRVFDQMPEKDIVS-WSSMI 204
G + +A+ D+MP S W S++
Sbjct: 400 GLLHEAKDFIDRMPFDATASMWGSLL 425
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/583 (40%), Positives = 345/583 (59%), Gaps = 6/583 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P+ T+ ++ C +R H I+ G D D F+ T L+ +Y G + A KV
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT----Q 143
FD + + W A+ G+ EE + ++ ++ G++ D F+ VL AC
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+ L K IH ++ G +V++ T+LVD+YA+ G ++ A VF MP +++VSWS+M
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 204 IQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
I YA NG EAL F M RE + P TMV VL ACASL ALE G ++ R
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
S + + L+ MY +CG++ +VF M D+D V WN+++S ++GY K A +F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ G P TFV +L C+H GLV+EG++ F +M R + P IEHY CMVDLLGR
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+ +LDEA ++++ M EP VWG+LL CR+H +LAE +L ALEP N+GNYVLL
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLL 494
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
++IY+ + W++ +++ ++ +G+QK+ G W+EV ++ F+ D +PL E+I++ L
Sbjct: 495 ADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFL 554
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+LA +K G++P T VL+++E EEK+ + HSEKLALAFGLI T+ + IRI KNL
Sbjct: 555 VKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNL 614
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH K ISK +EI+VRD NRFH F G CSC D+W
Sbjct: 615 RLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 164/314 (52%), Gaps = 8/314 (2%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACARE----HDFQLGVRSHSLIVKAGLDCDEFV 67
+ + Y M G FT+ +VLKAC + G H+ + + G ++
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 68 KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH--R 125
T+L+++Y G + A VF +P +NVVSW+A+I+ Y G EA+ FR ++ +
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
P+S ++V VL AC L L K IHGY+ G + V ++LV +Y +CG +E
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVG 339
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+RVFD+M ++D+VSW+S+I Y +G+ K+A+ +F M P T V VL AC+
Sbjct: 340 QRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHE 399
Query: 246 GALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNA 303
G +E G M R+ + + ++D+ + R+ +A K+ ++M+ + VW +
Sbjct: 400 GLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGS 459
Query: 304 VVSGLSMNGYVKVA 317
++ ++G V++A
Sbjct: 460 LLGSCRIHGNVELA 473
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 167/341 (48%), Gaps = 16/341 (4%)
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
+S +I EG L++AI R+L + P + ++ C LS A +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+ + G ++ F+AT L+ +Y+ G+++ AR+VFD+ ++ I W+++ + G +E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACA----SLGALELGVWASSFMERNEFLSNPVLGTT 272
L +++ M R ++ + +T VL AC ++ L G + + R + S+ + TT
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL--EKCGIQ 330
L+DMYA+ G + A VF M ++ V W+A+++ + NG A F ++ E
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEA 388
PN T V +L C +++G+ + R + S+ P+I +V + GR G+L+
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYGRCGKLEVG 339
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+ M + + + W +L++ +H A + +++A
Sbjct: 340 QRVFDRM-HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/575 (41%), Positives = 352/575 (61%), Gaps = 42/575 (7%)
Query: 68 KTSLLNLYVHCGY-----LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL 122
+ +LNL +H Y + +L +F D ++ +TA I+ G ++A ++ +L
Sbjct: 60 RYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL 119
Query: 123 LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
L + P+ F+ +L +C+ + K IH +V + G G + +VAT LVD+YAK G++
Sbjct: 120 LSSQINPNEFTFSSILKSCST----KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDV 175
Query: 183 EKARRVFDQMPEK-------------------------------DIVSWSSMIQGYASNG 211
A++VFD+MPE+ DIVSW+ MI GY+ +G
Sbjct: 176 VSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHG 235
Query: 212 FPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
FP +AL +F + + KP+ T+V LSAC+ +GALE G W F+ + N +
Sbjct: 236 FPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVC 295
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK-CGI 329
T LIDMY+KCG + +A VF + KD V WNA+++G +M+GY + A +F +++ G+
Sbjct: 296 TALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGL 355
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
QP TF+G L C HAGLV+EG Q F SM + + + P IEHYGC+V LLGR+GQL A+
Sbjct: 356 QPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAY 415
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
E+IK+M ME ++++W ++L C+LH + L + + LI NSG YVLLSNIY+
Sbjct: 416 EIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVG 475
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
+ AK+R++M +KGI K G S +E+D VHEF GD H S++IY+ L +++ ++K
Sbjct: 476 DYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIK 535
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
+ G+VP T+ VL D+EE EK+ L HSE+LA+A+GLI+T P ++I KNLRVC DCH
Sbjct: 536 SHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHT 595
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KLISKITGR+I++RD NRFH F +GSCSC DFW
Sbjct: 596 VTKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 184/341 (53%), Gaps = 52/341 (15%)
Query: 19 NSMRNEGFL-----------PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFV 67
N ++++ FL P FTF +LK+C+ + G H+ ++K GL D +V
Sbjct: 106 NGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCSTKS----GKLIHTHVLKFGLGLDPYV 161
Query: 68 KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL 127
T L+++Y G + A KVFD +P++++VS TA+I+ Y +GN+E A +F R+ R +
Sbjct: 162 ATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDI 221
Query: 128 --------------------------------KPDSFSIVRVLTACTQLGDLSTAKWIHG 155
KPD ++V L+AC+Q+G L T +WIH
Sbjct: 222 VSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHV 281
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+VN + NV V T+L+D+Y+KCG++E+A VF+ P KDIV+W++MI GYA +G+ ++
Sbjct: 282 FVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQD 341
Query: 216 ALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT--T 272
AL +F MQ L+P T +G L ACA G + G+ M + E+ P +
Sbjct: 342 ALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQ-EYGIKPKIEHYGC 400
Query: 273 LIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNG 312
L+ + + G++ +A ++ + M + D V+W++V+ ++G
Sbjct: 401 LVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHG 441
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/563 (41%), Positives = 331/563 (58%), Gaps = 11/563 (1%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNL--------YVHCGYLADALKVFDDIPDKNVVSWTAIIS 104
H+ I+K GL + + T + Y + P + + +I
Sbjct: 38 HAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTPSYDAFLFNTLIR 97
Query: 105 GYINEGNLEEAINMF-RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG 163
Y + + +F R +L G+ P+ F+ VL C +G L K +HG V + G
Sbjct: 98 AYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFE 157
Query: 164 RNVFVATSLVDLYAKCGN--MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
+V V +L+ +Y G E A +VFD P+ D V+WS+MI G+ G A+D+F
Sbjct: 158 EDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFR 217
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
MQ + P+ TMV VLSACA LGALELG W S++E+ + L LIDM+AKCG
Sbjct: 218 EMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCG 277
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
+ +A K+FR+M + V W +V++GL+M+G A +F ++ + GI P+ F+G+L
Sbjct: 278 NVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLS 337
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C+H+GLVD+GR +F SM R FS+ P +EHYGCMVDLL R G + EA E ++ MP EPN
Sbjct: 338 ACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQ 397
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMM 461
I+W ++ C + L E + +LI EP + NYVLLSNIY+ +W K+R MM
Sbjct: 398 IIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMM 457
Query: 462 GDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVL 521
+G++K+ G + +EV+ ++EF+ GD SH ++IY +DE+ ++K AG+VPTT VL
Sbjct: 458 DMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQVL 517
Query: 522 FDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGRE 581
DI+EE+K+ L HSEKLA+AF L+ T P IRI KNLRVC DCH A K ISK+ RE
Sbjct: 518 LDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYNRE 577
Query: 582 IIVRDNNRFHCFIEGSCSCKDFW 604
I+VRD NRFH F G CSC+DFW
Sbjct: 578 IVVRDRNRFHHFKNGLCSCRDFW 600
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 185/331 (55%), Gaps = 5/331 (1%)
Query: 1 MIRGFV-SNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR + + D ++ FY +M G P FTFPFVLK CA +LG H +VK
Sbjct: 95 LIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKF 154
Query: 60 GLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
G + D V +L+++Y G A KVFDD P + V+W+A+I+G++ G A++
Sbjct: 155 GFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVD 214
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+FR + G+ PD ++V VL+AC LG L KW+ YV + ++V + +L+D++A
Sbjct: 215 LFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFA 274
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCGN++KA ++F QM + IVSW+S+I G A +G +A+ +F M + P+ +G
Sbjct: 275 KCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIG 334
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGT-TLIDMYAKCGRMAQACKVFREMK-D 295
VLSAC+ G ++ G + MERN + V ++D+ + G + +A + ++M +
Sbjct: 335 VLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFE 394
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
+Q++W +++ G +K+ + +L K
Sbjct: 395 PNQIIWRTIITACHATGELKLGESISKELIK 425
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 140/297 (47%), Gaps = 39/297 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GFV C A++ + M+ G P T VL ACA +LG S + K
Sbjct: 199 MIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKN 258
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + +L++++ CG + A+K+F + + +VSWT++I+G G +A+++F
Sbjct: 259 IPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFD 318
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ PD + + VL+AC+ G + KGR F G
Sbjct: 319 EMVENGITPDDVAFIGVLSACSHSGLVD-------------KGRYYF------------G 353
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ME R F +P+ + + M+ GF KEA + +Q+ +P +++
Sbjct: 354 SME---RNFSIVPK--VEHYGCMVDLLCRGGFVKEAFEF---VQKMPFEPNQIIWRTIIT 405
Query: 241 ACASLGALELGVWASSFMERNEFL--SNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
AC + G L+LG S + ++E + SN VL L ++YAK + + KV REM D
Sbjct: 406 ACHATGELKLGESISKELIKSEPMHESNYVL---LSNIYAKLRQWEKKTKV-REMMD 458
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/608 (39%), Positives = 363/608 (59%), Gaps = 5/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N+ F+ A+ +++M+ G +P+NF+ L +C+ LG + H K G
Sbjct: 528 MISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWG 587
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN-EGNLEEAINMF 119
LD D V +LL LY + + KVF +P+ + VSW + I E ++ +A+ F
Sbjct: 588 LDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYF 647
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G +P+ + + +L A + L IH + + + + +L+ Y KC
Sbjct: 648 LEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKC 707
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
ME +F +M E+ D VSW+SMI GY +G +A+D+ + M + K + +T V
Sbjct: 708 EQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATV 767
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
LSACAS+ LE G+ + R S+ V+G+ L+DMYAKCG++ A + F M ++
Sbjct: 768 LSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNI 827
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WN+++SG + +G+ + A +F ++++ G P+ TFVG+L C+H GLVDEG + F S
Sbjct: 828 YSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKS 887
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLH-KK 416
M V+ L+P IEH+ CMVDLLGR+G + + + IK+MPM+PN ++W +L A CR + +
Sbjct: 888 MGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRN 947
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
T+L + LI LEP N+ NYVLLSN+++A W D + R M ++K GCSWV
Sbjct: 948 TELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVN 1007
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
+ VH F+ GD +HP EKIY KL EL K++ AG+VP T + L+D+E E K+ L+ H
Sbjct: 1008 MKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYH 1067
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEKLA+AF ++T + IRI KNLRVCGDCH A K ISKI GR+II+RD+NRFH F G
Sbjct: 1068 SEKLAIAF-VLTRKSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGG 1126
Query: 597 SCSCKDFW 604
CSC D+W
Sbjct: 1127 MCSCGDYW 1134
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 190/382 (49%), Gaps = 5/382 (1%)
Query: 49 GVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI 107
G H+ + ++GL D + +L+N+Y C + +A VF +P K+ VSW ++ISG
Sbjct: 474 GQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLD 533
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
+ EEA++ F + G+ P +FS++ L++C+ LG L+ + IHG + G +V
Sbjct: 534 HNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVS 593
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS-NGFPKEALDMFYNMQRE 226
V+ +L+ LYA+ ++ + ++VF QMPE D VSW+S I A +AL F M +
Sbjct: 594 VSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQA 653
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+P T + +L+A +S L LG + + + + + L+ Y KC +M
Sbjct: 654 GWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDC 713
Query: 287 CKVFREMKD-KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
+F M + +D+V WN+++SG +G + A + + + G + +G TF +L C
Sbjct: 714 EIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACAS 773
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
++ G + R L + +VD+ + G++D A + MP+ N W
Sbjct: 774 VATLERGMEVHACAVRA-CLESDVVVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWN 831
Query: 406 ALLAGCRLHKKTDLAEHVLNQL 427
++++G H A + ++
Sbjct: 832 SMISGYARHGHGQKALKIFTRM 853
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 196/371 (52%), Gaps = 15/371 (4%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H + K G D F +L+N+YV G L A K+FD++P KN+VSW+ +ISGY
Sbjct: 163 HLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMP 222
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD--LSTAKWIHGYVNEAGKGRNVFVAT 170
+EA ++F+ ++ GL P+ F++ L AC Q G + IH ++ + ++ ++
Sbjct: 223 DEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSN 282
Query: 171 SLVDLYAKC-GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE--- 226
L+ +Y+ C G+++ A RVFD++ ++ V+W+S+I Y G A +F MQ E
Sbjct: 283 VLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVE 342
Query: 227 -NLKPEYYTMVGVLSACASLG--ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
NL+P YT+ +++A SL L L + +E++ FL + +G+ L++ +A+ G M
Sbjct: 343 LNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLM 402
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
A +F++M D++ V N ++ GL+ + A VF +++ ++ N + V LL
Sbjct: 403 DCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTF 461
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHY----GCMVDLLGRSGQLDEAHELIKSMPMEP 399
T + EG++ + + +++ +V++ G+ +D A + + MP
Sbjct: 462 TEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMP-SK 520
Query: 400 NAIVWGALLAG 410
+ + W ++++G
Sbjct: 521 DTVSWNSMISG 531
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 207/424 (48%), Gaps = 17/424 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR--EHDFQLGVRSHSLIVK 58
+I G+ N A + + + G LP +F L+AC + +LG++ H+ I K
Sbjct: 212 LISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICK 271
Query: 59 AGLDCDEFVKTSLLNLYVHC-GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
D + L+++Y C G + DA +VFD+I +N V+W +IIS Y G+ A
Sbjct: 272 LPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFK 331
Query: 118 MFRRLLHRG----LKPDSFSIVRVLTACTQLGD--LSTAKWIHGYVNEAGKGRNVFVATS 171
+F + G L+P+ +++ ++TA L D L + + + ++G R+++V ++
Sbjct: 332 LFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSA 391
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
LV+ +A+ G M+ A+ +F QM +++ V+ + ++ G A +EA +F M ++ ++
Sbjct: 392 LVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEIN 450
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV-----LGTTLIDMYAKCGRMAQA 286
++V +LS L+ G + F S V +G L++MY KC + A
Sbjct: 451 SESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNA 510
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
C VF+ M KD V WN+++SGL N + A F +++ G+ P+ + + L C+
Sbjct: 511 CSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSL 570
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
G + GRQ + + L + ++ L + ++E ++ MP E + + W +
Sbjct: 571 GWLTLGRQIHGEGFK-WGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNS 628
Query: 407 LLAG 410
+
Sbjct: 629 FIGA 632
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 175/356 (49%), Gaps = 25/356 (7%)
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLT-ACTQLGDLST-------------AKWIHGYVN 158
E A ++F RLL++ +++ +R T + +QL L + A +H +
Sbjct: 110 EMASHLFMRLLNK--YNSTYTFLRHYTFSHSQLQQLDSEFDRYKTSSSLYDANHLHLQLY 167
Query: 159 EAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALD 218
+ G +VF +L+++Y + GN+ AR++FD+MP+K++VSWS +I GY N P EA
Sbjct: 168 KTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACS 227
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGA--LELGVWASSFMERNEFLSNPVLGTTLIDM 276
+F + L P ++ + L AC G+ ++LG+ +F+ + +S+ +L L+ M
Sbjct: 228 LFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSM 287
Query: 277 YAKC-GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
Y+ C G + A +VF E+K ++ V WN+++S G AF +F ++ G++ N
Sbjct: 288 YSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRP 347
Query: 336 FVGLLCGCTHAG--LVDEGRQFFNSM-SRVFSLTPMIEHY--GCMVDLLGRSGQLDEAHE 390
LC A L D G M +R+ + + Y +V+ R G +D A
Sbjct: 348 NEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKM 407
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYS 446
+ K M + NA+ L+ G + + A V ++ L NS + V+L + ++
Sbjct: 408 IFKQM-YDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFT 462
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/619 (39%), Positives = 369/619 (59%), Gaps = 17/619 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE--GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
M+ G+ + + HA+ SM+ + P T +L A++ G H+ ++
Sbjct: 82 MLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIR 141
Query: 59 AGLDCDE----------FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
A L + + T+LL++Y CG L A +VFD +P +N V+W+A+I G++
Sbjct: 142 ACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 201
Query: 109 EGNLEEAINMFRRLLHRGL---KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+ +A +F+ +L +GL P S I L AC L L + +H + ++G +
Sbjct: 202 CSRMTQAFLLFKAMLAQGLCFLSPTS--IASALRACASLDHLRMGEQLHALLAKSGVHAD 259
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
+ SL+ +YAK G +++A +FD+M KD VS+S+++ GY NG +EA +F MQ
Sbjct: 260 LTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 319
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
N++P+ TMV ++ AC+ L AL+ G + + S + LIDMYAKCGR+
Sbjct: 320 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 379
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
+ +VF M +D V WN +++G ++G K A +F ++ G P+G TF+ LL C+H
Sbjct: 380 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 439
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
+GLV EG+ +F+ M + LTP +EHY CMVDLL R G LDEA+E I+SMP+ + VW
Sbjct: 440 SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 499
Query: 406 ALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKG 465
ALL CR++K DL + V + L P +GN+VLLSNIYSA+ ++++AA++R + +G
Sbjct: 500 ALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG 559
Query: 466 IQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIE 525
+K GCSW+E++G +H F+ GD SHP S +IY +LD + +K G+ P T VL D+E
Sbjct: 560 FKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLE 619
Query: 526 EEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVR 585
EEEK+ L CHSEKLA+A+G+++ + I + KNLRVCGDCH IK IS + R IIVR
Sbjct: 620 EEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVR 679
Query: 586 DNNRFHCFIEGSCSCKDFW 604
D NRFH F G CSC DFW
Sbjct: 680 DANRFHHFKNGQCSCGDFW 698
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 215/403 (53%), Gaps = 21/403 (5%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P N+TFPF LKAC+ D G H + AGL D FV T+LL++YV C L DA +
Sbjct: 8 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL---LHRGLKPDSFSIVRVLTACTQL 144
F +P +++V+W A+++GY + G A+ + +HR L+P++ ++V +L Q
Sbjct: 68 FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR-LRPNASTLVALLPLLAQQ 126
Query: 145 GDLSTAKWIHGYV-------NEAGKGR---NVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
G L+ +H Y N K + V + T+L+D+YAKCG++ ARRVFD MP
Sbjct: 127 GALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA 186
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQREN---LKPEYYTMVGVLSACASLGALELG 251
++ V+WS++I G+ +A +F M + L P ++ L ACASL L +G
Sbjct: 187 RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMG 244
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + ++ ++ G +L+ MYAK G + QA +F EM KD V ++A+VSG N
Sbjct: 245 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 304
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G + AF VF +++ C ++P+ T V L+ C+H + GR S+ + L
Sbjct: 305 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSI 363
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++D+ + G++D + ++ MP + + W ++AG +H
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIH 405
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 157/341 (46%), Gaps = 57/341 (16%)
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
L HR + P++++ L AC+ L D + IH + AG ++FV+T+L+D+Y KC
Sbjct: 2 LRHR-VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVL 239
+ A +F MP +D+V+W++M+ GYA +G A+ +MQ + L+P T+V +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 240 SACASLGALELGVWASSFMER----------NEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
A GAL G ++ R ++ +LGT L+DMYAKCG + A +V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF---------------------------- 321
F M +++V W+A++ G + + AF +F
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 322 --------GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
L K G+ + LL AGL+D+ F+ M+ +++ Y
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS-----YS 295
Query: 374 CMVDLLGRSGQLDEAHELIKSMP---MEPNAIVWGALLAGC 411
+V ++G+ +EA + K M +EP+A +L+ C
Sbjct: 296 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 336
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/642 (37%), Positives = 362/642 (56%), Gaps = 39/642 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR N F A+ Y+ + P +TFP V+ ACA DF++ H ++ G
Sbjct: 86 IIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMG 145
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA----- 115
D ++ +L+++Y L A KVF+++P ++VVSW ++ISGY G EA
Sbjct: 146 FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYY 205
Query: 116 --INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLV 173
I +F ++++ KPD +I +L AC LGDL K++H Y+ +G + + L+
Sbjct: 206 QSIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI 264
Query: 174 DLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ--------- 224
++YAKCGN+ ++ VF M KD VSW+SMI Y NG ++L +F NM+
Sbjct: 265 NMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNT 324
Query: 225 ----------------------RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
E + P+ TM+ +L C+ L A G + +
Sbjct: 325 IIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLG 384
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
S+ +G LI+MY+KCG + + +VF+ MK KD V W A++S M G K A FG
Sbjct: 385 LESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFG 444
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
++E GI P+ FV ++ C+H+GLV+EG +F+ M + + + P IEHY C+VDLL RS
Sbjct: 445 EMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRS 504
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLS 442
LD+A + I SMP++P++ +WGALL+ CR+ T++AE V ++I L P ++G YVL+S
Sbjct: 505 ALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVS 564
Query: 443 NIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLD 502
NIY+A KW+ IR + +G++K GCSW+E+ V+ F G E++ L
Sbjct: 565 NIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLG 624
Query: 503 ELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
LA + G++ VL DI+E+EK+ L HSE+LA+AFGL+ T P +++ KNLR
Sbjct: 625 MLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLR 684
Query: 563 VCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
VC DCH K ISKI RE++VRD NRFH F +G+CSC D+W
Sbjct: 685 VCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 205/430 (47%), Gaps = 53/430 (12%)
Query: 36 VLKACAREHDFQLGVRS-------------HSLIVKAGLDCDEFVKTSLLNLYVHCGYLA 82
VL C+R+ F R+ HSLI+ GL L+ Y H
Sbjct: 6 VLHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPT 65
Query: 83 DALKVFD-DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
+ VF P NV W +II + G EA++++ L+PD+++ V+ AC
Sbjct: 66 SSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC 125
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
L D AK IH V + G G ++++ +L+D+Y + +++KAR+VF++MP +D+VSW+
Sbjct: 126 AGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWN 185
Query: 202 SMIQGYASNGFPKEALDMFYN-----MQREN-LKPEYYTMVGVLSACASLGALELGVWAS 255
S+I GY +NG+ EAL+++Y M+ N KP+ T+ +L AC LG LE G +
Sbjct: 186 SLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVH 245
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
+M + + + LI+MYAKCG + + +VF MK KD V WN++++ NG +
Sbjct: 246 DYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMG 305
Query: 316 VAFGVFGQL------------------EKC-------------GIQPNGNTFVGLLCGCT 344
+ VF + E C G+ P+ T + +L C+
Sbjct: 306 DSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCS 365
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
+G++ + ++ L + ++++ + G L + ++ K M + + + W
Sbjct: 366 LLAAKRQGKEIHGCIFKL-GLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTW 423
Query: 405 GALLAGCRLH 414
AL++ C ++
Sbjct: 424 TALISACGMY 433
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/656 (37%), Positives = 364/656 (55%), Gaps = 73/656 (11%)
Query: 19 NSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC 78
N +R+ F P P LK+C+ +L H+ AG+ D FV +SLL+ Y+
Sbjct: 12 NFLRHVSFPPDPRLLPSALKSCSAL---RLARALHAAAAVAGVSRDAFVASSLLHAYLRF 68
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS------- 131
G ADA V D +P + VV W+A+I+ + + G+ E A + R+ G++P+
Sbjct: 69 GATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLV 128
Query: 132 -------------FSIVRV---------------LTACTQLGDLSTAKWIHGYVNEAGKG 163
++VR+ L+A +GD++ + +HGYV +AG
Sbjct: 129 SGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCR 188
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI-------------------------- 197
+ VAT+L+D+Y KCG ++ RVFD+ D+
Sbjct: 189 LDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREF 248
Query: 198 ---------VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
VSW+S++ NG EA+D+F MQ E ++P T+ VL A A++ AL
Sbjct: 249 VGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAAL 308
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
G A F R F + +G+ L+DMYAKCGR+ A +F M ++ V WNA++ G
Sbjct: 309 MHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGY 368
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+M+G + A +F ++ +P+ TF +L C+ AG +EGR +FN M ++P
Sbjct: 369 AMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPR 428
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+EHY CMV LLGR+G+LD+A+++I MP EP+ +WG+LL CR+H LAE L
Sbjct: 429 MEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLF 488
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
LEP N+GNYVLLSNIY++ W+ ++R MM G++K +GCSW+E+ VH L GD
Sbjct: 489 QLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGD 548
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
+SHP+ I KL L +++ GF P+TD+VL D+EE+EK L+ HSEKLA+A GLI+
Sbjct: 549 SSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLIS 608
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
T+ +++ KNLR+CGDCHEA+K IS REI VRD NRFH F +G CSC D+W
Sbjct: 609 TSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 11/222 (4%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A++ + M++EG P + T P VL A A G +H ++ G D +V ++L++
Sbjct: 276 AVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVD 335
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG + DA +F+ +P +NVVSW A+I GY G E A+ +FR + KPD +
Sbjct: 336 MYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVT 395
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEA----GKGRNVFVATSLVDLYAKCGNMEKARRVF 189
VL AC+Q G + Y NE G + +V L + G ++ A +
Sbjct: 396 FTCVLGACSQAGWTEEGR---SYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDII 452
Query: 190 DQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
+QMP E D W S++ +G + A + + ++ EN
Sbjct: 453 NQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPEN 494
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/569 (41%), Positives = 355/569 (62%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L++ AR G+ H+ I++ GL D L+N+Y CG + A K+FD++P ++
Sbjct: 26 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 85
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+VSW ++ + G+ E+A+ +F ++ G F++ V+ AC + K +HG
Sbjct: 86 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG 145
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ + NVFV T+L+D+YAKCG ++ A VF+ MPE+ V+WSSM+ GY N +E
Sbjct: 146 FALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEE 205
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL +F+ Q L+ +T+ LSACA+ AL G + + SN + ++LID
Sbjct: 206 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLID 265
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MYAKCG + +A VF +++K+ V+WNA++SG S + A F ++++ GI PN T
Sbjct: 266 MYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 325
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
++ +L C+H GLV++GR++F+ M RV +++P + HY CMVD+LGR+G L EA + I M
Sbjct: 326 YISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRM 385
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
P + A +WG+LLA CR+++ +LAE L +EP N+GN+VLLSNIY+A+ +W + A
Sbjct: 386 PFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVA 445
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
+ R+++ + +K RG SW+E+ VH F+VG+ +HP +IY KL++L ++K G+
Sbjct: 446 RARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKA 505
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
T+H L D+EE KQ L HSEKLAL FG++ IRI KNLR+CGDCH +KL S
Sbjct: 506 KTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLAS 565
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IT REIIVRD NRFH F G CSC +FW
Sbjct: 566 SITEREIIVRDTNRFHHFKNGYCSCGEFW 594
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 165/301 (54%), Gaps = 3/301 (0%)
Query: 9 DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK 68
DC + A+ + M+ EG + FT V+ ACA + + H +K LD + FV
Sbjct: 101 DC-EKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVG 159
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T+LL++Y CG + DA VF+ +P+++ V+W+++++GY+ EEA+ +F R GL+
Sbjct: 160 TALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLE 219
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
+ F+I L+AC L K + + G G N+FV +SL+D+YAKCG +E+A V
Sbjct: 220 HNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTV 279
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F + EK++V W++++ G++ + EA+ F MQ+ + P T + VLSAC+ LG +
Sbjct: 280 FSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLV 339
Query: 249 ELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVS 306
E G M R +S VL + ++D+ + G + +A M D +W ++++
Sbjct: 340 EKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 399
Query: 307 G 307
Sbjct: 400 S 400
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+V N+ ++ A+ ++ + G FT L ACA G + ++ K G
Sbjct: 193 MVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTG 252
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV +SL+++Y CG + +A VF + +KNVV W AI+SG+ EA+ F
Sbjct: 253 IGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFE 312
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G+ P+ + + VL+AC+ LG + K+ + NV + +VD+ +
Sbjct: 313 KMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRA 372
Query: 180 GNMEKARRVFDQMPEKDIVS-WSSMI 204
G + +A+ D+MP S W S++
Sbjct: 373 GLLHEAKDFIDRMPFDATASMWGSLL 398
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/600 (39%), Positives = 357/600 (59%), Gaps = 10/600 (1%)
Query: 15 IEFYNSMRNEGFLPTNFTFPF----------VLKACAREHDFQLGVRSHSLIVKAGLDCD 64
I + S E P ++ F +L+ CAR H ++ L D
Sbjct: 38 ISVFASYEQEELSPGRYSDEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGD 97
Query: 65 EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
+ L+N Y CG++ A +VFD + ++++VSW +I Y EA+++F + +
Sbjct: 98 VTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRN 157
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G K F+I VL+AC D K +H + N++V T+L+DLYAKCG +
Sbjct: 158 EGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMIND 217
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
A +VF+ M +K V+WSSM+ GY + +EAL ++ QR +L+ +T+ V+ AC++
Sbjct: 218 AVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSN 277
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
L AL G + + ++ F SN + ++ +DMYAKCG + ++ +F E+++K+ +WN +
Sbjct: 278 LAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTI 337
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
+SG + + K +F ++++ G+ PN TF LL C H GLV+EGR+FF M +
Sbjct: 338 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYG 397
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
L+P + HY CMVD+LGR+G L EA+ELIKS+P EP A +WG+LLA CR+ K +LAE
Sbjct: 398 LSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAA 457
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+L LEP N+GN+VLLSNIY+A+ +W + AK R ++ D ++K+RG SW+++ VH F
Sbjct: 458 KKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIF 517
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
VG++SHP +I + LD L +L+ G+ P+ +H L D+E +K+ L HSEKLAL F
Sbjct: 518 RVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVF 577
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
GL+ +RI KNLR+C DCHE +K S T R IIVRD NRFH F +G CSC +FW
Sbjct: 578 GLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 178/309 (57%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + N A++ + MRNEGF + FT VL AC D + H L +K
Sbjct: 135 MIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTS 194
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + +V T+LL+LY CG + DA++VF+ + DK+ V+W+++++GY+ N EEA+ ++R
Sbjct: 195 LDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYR 254
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R L+ + F++ V+ AC+ L L K +H + ++G G NVFVA+S VD+YAKCG
Sbjct: 255 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCG 314
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ ++ +F ++ EK+I W+++I G+A + PKE + +F MQ++ + P T +LS
Sbjct: 315 SLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 374
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
C G +E G M LS N V + ++D+ + G +++A ++ + + +
Sbjct: 375 VCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTA 434
Query: 299 VVWNAVVSG 307
+W ++++
Sbjct: 435 SIWGSLLAS 443
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 177/345 (51%), Gaps = 21/345 (6%)
Query: 90 DIPDKNVVSWTA-------IISGYINEGNLEEAINMFRRLLHRGLKP----DSFSIVR-- 136
+P KN++ +TA I+ N +L I++F L P D F++V+
Sbjct: 5 SLPSKNILGFTANFLIRCKILPRRSNTSSLSRNISVFASYEQEELSPGRYSDEFNVVQAS 64
Query: 137 ----VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+L C + G + AK HG +V ++ L++ Y+KCG +E AR+VFD M
Sbjct: 65 DFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGM 124
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC-ASLGALELG 251
E+ +VSW++MI Y N EALD+F+ M+ E K +T+ VLSAC A+ ALE
Sbjct: 125 LERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECK 184
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
M+ + L N +GT L+D+YAKCG + A +VF M+DK V W+++V+G +
Sbjct: 185 KLHCLSMKTSLDL-NLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQS 243
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
+ A ++ + ++ ++ N T ++C C++ + EG+Q +++ R +
Sbjct: 244 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVIRKSGFGSNVFV 302
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
VD+ + G L E++ +I S E N +W +++G H +
Sbjct: 303 ASSAVDMYAKCGSLRESY-IIFSEVQEKNIELWNTIISGFAKHAR 346
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/586 (40%), Positives = 351/586 (59%), Gaps = 35/586 (5%)
Query: 54 SLIVKAGLDCDEFVKTSLLNLYVHCGYLAD-ALKVFDDIPDKNVVSWTAIISGYINEGNL 112
L+VK L+ F + + +H D A K+ + + + + ++I Y
Sbjct: 31 QLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNNPTLFTLNSMIRAYSKSSTP 90
Query: 113 EEAINMFRRLLH---RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
++ + + +LH L PD+++ ++ C QL T +HG V + G + V
Sbjct: 91 SKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQ 150
Query: 170 TSLVDLYA-------------------------------KCGNMEKARRVFDQMPEKDIV 198
T LV +YA KCG+++ AR++FD+MPE+D V
Sbjct: 151 TGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHV 210
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+W++MI GYA G +EALD+F+ MQ E +K +MV VLSAC L L+ G W +++
Sbjct: 211 TWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYV 270
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
ER + LGT L+DMYAKCG + +A +VF MK+++ W++ + GL+MNG+ + +
Sbjct: 271 ERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESL 330
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
+F +++ G+QPNG TF+ +L GC+ GLV+EGR+ F+SM V+ + P +EHYG MVD+
Sbjct: 331 DLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDM 390
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNY 438
GR+G+L EA I SMPM P+ W ALL CR++K +L E +++ LE N G Y
Sbjct: 391 YGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAY 450
Query: 439 VLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIY 498
VLLSNIY+ W + +R M KG++K+ GCS +EVDG VHEF+VGD SHP ++I
Sbjct: 451 VLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIE 510
Query: 499 SKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIA 558
KL+E++ L+ +G+V T+ VLFDIEEEEK+ L+ HSEK+A+AFGLI+ IR+
Sbjct: 511 MKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDALSKHSEKVAIAFGLISLKGVVPIRVV 570
Query: 559 KNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
NLR+C DCH K+ISKI REIIVRD NRFH F +G CSCKD+W
Sbjct: 571 MNLRICWDCHNVAKMISKIFNREIIVRDRNRFHHFKDGECSCKDYW 616
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 179/347 (51%), Gaps = 38/347 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM---RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIV 57
MIR + + + FY ++ N P N+TF F+++ CA+ G+ H ++
Sbjct: 80 MIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVI 139
Query: 58 KAGLDCDEFVKTSLLNLYVH-------------------------------CGYLADALK 86
K G + D V+T L+ +Y CG + A K
Sbjct: 140 KHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARK 199
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
+FD++P+++ V+W A+I+GY G EA+++F + G+K + S+V VL+ACT L
Sbjct: 200 MFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQV 259
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
L +W+H YV V + T+LVD+YAKCGN+++A +VF M E+++ +WSS I G
Sbjct: 260 LDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGG 319
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
A NGF +E+LD+F +M+RE ++P T + VL C+ +G +E G M RN +
Sbjct: 320 LAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSM-RNVYGIG 378
Query: 267 PVLGT--TLIDMYAKCGRMAQACKVFREMKDKDQV-VWNAVVSGLSM 310
P L ++DMY + GR+ +A M + V W+A++ M
Sbjct: 379 PQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRM 425
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 135/312 (43%), Gaps = 41/312 (13%)
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA--KCGNMEKARRVFDQM 192
+ +L +CT L ++ K IH + G N V A N++ A ++ +
Sbjct: 13 ISLLNSCTTLKEM---KQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHN 69
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNM---QRENLKPEYYTMVGVLSACASLGALE 249
+ + +SMI+ Y+ + P ++ + N+ NL P+ YT ++ CA L A
Sbjct: 70 NNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHV 129
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMY-------------------------------A 278
G+ + ++ F +P + T L+ MY A
Sbjct: 130 TGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACA 189
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
KCG + A K+F EM ++D V WNA+++G + G + A VF ++ G++ N + V
Sbjct: 190 KCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVL 249
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
+L CTH ++D GR + R + + + +VD+ + G +D A ++ M E
Sbjct: 250 VLSACTHLQVLDHGRWVHAYVER-YKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMK-E 307
Query: 399 PNAIVWGALLAG 410
N W + + G
Sbjct: 308 RNVYTWSSAIGG 319
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/673 (37%), Positives = 374/673 (55%), Gaps = 70/673 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKA 59
MI GF N+ AI + M++EGF P NFTF VL A D + V+ H+ +K+
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKS 178
Query: 60 GLDCDEFVKTSLLNLYVHCG----YLADALKVFDDIPDKNVVSWT--------------- 100
G V +L+++Y C L A KVFD+I +K+ SWT
Sbjct: 179 GAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLG 238
Query: 101 -----------------AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A+ISGY+N G +EA+ M RR++ G++ D F+ V+ AC
Sbjct: 239 EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT 298
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
G L K +H YV + + SLV LY KCG ++AR +F++MP KD+VSW+++
Sbjct: 299 AGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNAL 357
Query: 204 IQGY-------------------------------ASNGFPKEALDMFYNMQRENLKPEY 232
+ GY A NGF +E L +F M+RE +P
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD 417
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
Y G + +CA LGA G + + + F S+ G LI MYAKCG + +A +VFR
Sbjct: 418 YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRT 477
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M D V WNA+++ L +G+ A V+ ++ K GI+P+ T + +L C+HAGLVD+G
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQG 537
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
R++F+SM V+ + P +HY ++DLL RSG+ +A +I+S+P +P A +W ALL+GCR
Sbjct: 538 RKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCR 597
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
+H +L ++L L P + G Y+LLSN+++A+ +W + A++R +M D+G++K C
Sbjct: 598 VHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVAC 657
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEE-EKQY 531
SW+E++ VH FLV D SHP +E +Y L +L +++ G+VP T VL D+E + K+
Sbjct: 658 SWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKED 717
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L HSEK+A+AFGL+ P IRI KNLR CGDCH + +S + R+II+RD RFH
Sbjct: 718 MLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFH 777
Query: 592 CFIEGSCSCKDFW 604
F G CSC +FW
Sbjct: 778 HFRNGECSCGNFW 790
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 199/439 (45%), Gaps = 77/439 (17%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRR 121
D+ +T++++ Y G + A VF+ P ++ V + A+I+G+ + + AIN+F +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 122 LLHRGLKPDSFSIVRVLTACTQLG-DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ H G KPD+F+ VL + D H ++G G V+ +LV +Y+KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 181 N----MEKARRVFDQMPEKDIVSWSSMIQGYASN-------------------------- 210
+ + AR+VFD++ EKD SW++M+ GY N
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 211 ------GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GF +EAL+M M ++ + +T V+ ACA+ G L+LG +++ R E
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV-------------------- 304
S +L+ +Y KCG+ +A +F +M KD V WNA+
Sbjct: 319 SFH-FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 305 -----------VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
+SGL+ NG+ + +F +++ G +P F G + C G G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
Q+ + ++ + ++ + + G ++EA ++ ++MP +++ W AL+A
Sbjct: 438 QYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQ 495
Query: 414 H----KKTDLAEHVLNQLI 428
H + D+ E +L + I
Sbjct: 496 HGHGAEAVDVYEEMLKKGI 514
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 142/336 (42%), Gaps = 77/336 (22%)
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
L A+ +HG + G + L+D+Y K + AR++FD++ E D ++ ++M+ G
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 207 YASNG--------FPK-------------------------EALDMFYNMQRENLKPEYY 233
Y ++G F K A+++F M+ E KP+ +
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 234 TMVGVLSACASLGALE---LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR----MAQA 286
T VL+ A + E + A++ ++++ + L+ +Y+KC + A
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITS--VSNALVSVYSKCASSPSLLHSA 207
Query: 287 CKVFREMKDKDQVVW--------------------------------NAVVSGLSMNGYV 314
KVF E+ +KD+ W NA++SG G+
Sbjct: 208 RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFY 267
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
+ A + ++ GI+ + T+ ++ C AGL+ G+Q + R + ++
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--S 325
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+V L + G+ DEA + + MP + + + W ALL+G
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/572 (38%), Positives = 348/572 (60%), Gaps = 1/572 (0%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ + AC G + H+ ++ A F+ T L+ +YV CG L DA V D +P
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
+++VVSWT +ISGY EA+++F ++L G P+ +++ VLT+C+ + K
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+H + + ++FV +SL+D+YAK N+++ARRVFD +PE+D+VS +++I GYA G
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+EALD+F + E ++ + T +++A + L +L+ G + + R E L +
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
LIDMY+KCG++ + +VF M ++ V WNA++ G +G +F L K ++P+
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPD 311
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
T + +L GC+H GLVDEG F+++ + S HYGC++DLLGRSG+L++A LI
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 371
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
++MP E +WG+LL CR+H + E V +L+ +EP N+GNYV+LSNIY+A+ W
Sbjct: 372 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWK 431
Query: 453 DAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAG 512
D K+R +M +K + K G SW+ +D V+H F + HP + I +K+ E+ +KAAG
Sbjct: 432 DVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAG 491
Query: 513 FVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIK 572
FVP VL D+++E+K+ L HSEKLA+ FGL+ T P IR+ KNLR+C DCH K
Sbjct: 492 FVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAK 551
Query: 573 LISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+SK+ REI +RD NRFH G+C+C D+W
Sbjct: 552 FVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 184/340 (54%), Gaps = 5/340 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A++ + M G +P +T VL +C+ G + HSL+VK
Sbjct: 82 MISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN 141
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +SLL++Y + +A +VFD +P+++VVS TAIISGY +G EEA+++FR
Sbjct: 142 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 201
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G++ + + ++TA + L L K +H + V + SL+D+Y+KCG
Sbjct: 202 QLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCG 261
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +RRVFD M E+ +VSW++M+ GY +G E + +F ++ +E +KP+ T++ VLS
Sbjct: 262 KLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLS 320
Query: 241 ACASLGALE--LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKD 297
C+ G ++ L ++ + E++ L G +ID+ + GR+ +A + M +
Sbjct: 321 GCSHGGLVDEGLDIFDTVVKEQSALLHTGHYG-CIIDLLGRSGRLEKALNLIENMPFEST 379
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
+W +++ ++ V V V +L + + GN +
Sbjct: 380 PSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVI 419
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
++ ++AC AL G + M + LGT L+ MY +CG + A V
Sbjct: 9 RFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVL 68
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M ++ V W ++SG S A +F ++ + G PN T +L C+ +
Sbjct: 69 DRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIY 128
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+G+Q + + + + M ++D+ +S + EA + ++P E + + A+++G
Sbjct: 129 QGKQVHSLLVKTNFESHMFVG-SSLLDMYAKSENIQEARRVFDTLP-ERDVVSCTAIISG 186
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/619 (39%), Positives = 369/619 (59%), Gaps = 17/619 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE--GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
M+ G+ + + HA+ SM+ + P T +L A++ G H+ ++
Sbjct: 197 MLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIR 256
Query: 59 AGLDCDE----------FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
A L + + T+LL++Y CG L A +VFD +P +N V+W+A+I G++
Sbjct: 257 ACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 316
Query: 109 EGNLEEAINMFRRLLHRGL---KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+ +A +F+ +L +GL P S I L AC L L + +H + ++G +
Sbjct: 317 CSRMTQAFLLFKAMLAQGLCFLSPTS--IASALRACASLDHLRMGEQLHALLAKSGVHAD 374
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
+ SL+ +YAK G +++A +FD+M KD VS+S+++ GY NG +EA +F MQ
Sbjct: 375 LTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 434
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
N++P+ TMV ++ AC+ L AL+ G + + S + LIDMYAKCGR+
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
+ +VF M +D V WN +++G ++G K A +F ++ G P+G TF+ LL C+H
Sbjct: 495 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 554
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
+GLV EG+ +F+ M + LTP +EHY CMVDLL R G LDEA+E I+SMP+ + VW
Sbjct: 555 SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 614
Query: 406 ALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKG 465
ALL CR++K DL + V + L P +GN+VLLSNIYSA+ ++++AA++R + +G
Sbjct: 615 ALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG 674
Query: 466 IQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIE 525
+K GCSW+E++G +H F+ GD SHP S +IY +LD + +K G+ P T VL D+E
Sbjct: 675 FKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLE 734
Query: 526 EEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVR 585
EEEK+ L CHSEKLA+A+G+++ + I + KNLRVCGDCH IK IS + R IIVR
Sbjct: 735 EEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVR 794
Query: 586 DNNRFHCFIEGSCSCKDFW 604
D NRFH F G CSC DFW
Sbjct: 795 DANRFHHFKNGQCSCGDFW 813
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/432 (31%), Positives = 225/432 (52%), Gaps = 23/432 (5%)
Query: 1 MIRGFVSNDCFQHA--IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
+IR + S+ A + Y M P N+TFPF LKAC+ D G H +
Sbjct: 94 LIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIH 153
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
AGL D FV T+LL++YV C L DA +F +P +++V+W A+++GY + G A+
Sbjct: 154 AGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAH 213
Query: 119 FRRL---LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV-------NEAGKGR---N 165
+ +HR L+P++ ++V +L Q G L+ +H Y N K +
Sbjct: 214 LLSMQMQMHR-LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDG 272
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
V + T+L+D+YAKCG++ ARRVFD MP ++ V+WS++I G+ +A +F M
Sbjct: 273 VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLA 332
Query: 226 EN---LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
+ L P ++ L ACASL L +G + + ++ ++ G +L+ MYAK G
Sbjct: 333 QGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGL 390
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ QA +F EM KD V ++A+VSG NG + AF VF +++ C ++P+ T V L+
Sbjct: 391 IDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPA 450
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
C+H + GR S+ + L ++D+ + G++D + ++ MP + +
Sbjct: 451 CSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR-DIV 508
Query: 403 VWGALLAGCRLH 414
W ++AG +H
Sbjct: 509 SWNTMIAGYGIH 520
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 183/390 (46%), Gaps = 58/390 (14%)
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA--INMFRRLLHRGLKPDSF 132
++ G+L+ A +FD IP +V ++ +I Y + A ++++RR+L + P+++
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ L AC+ L D + IH + AG ++FV+T+L+D+Y KC + A +F M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVLSACASLGALEL 250
P +D+V+W++M+ GYA +G A+ +MQ + L+P T+V +L A GAL
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 251 GVWASSFMER----------NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
G ++ R ++ +LGT L+DMYAKCG + A +VF M +++V
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306
Query: 301 WNAVVSGLSMNGYVKVAFGVF------------------------------------GQL 324
W+A++ G + + AF +F L
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALL 366
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
K G+ + LL AGL+D+ F+ M+ +++ Y +V ++G+
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS-----YSALVSGYVQNGR 421
Query: 385 LDEAHELIKSMP---MEPNAIVWGALLAGC 411
+EA + K M +EP+A +L+ C
Sbjct: 422 AEEAFLVFKKMQACNVEPDAATMVSLIPAC 451
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/575 (40%), Positives = 349/575 (60%), Gaps = 6/575 (1%)
Query: 31 FTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDD 90
T+ ++K C Q H + G + F+ +L+N+YV G L +A +FD+
Sbjct: 17 ITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDE 76
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+PD+NVVSWT +IS Y N +A++ +L G++P+ ++ VL AC L +L
Sbjct: 77 MPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL--- 133
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ +HG + + G +VFV ++L+D Y+K G A VF++M D+V W+S+I G+A N
Sbjct: 134 RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQN 193
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
E L ++ M+R + + T+ VL AC L LELG + + + + +L
Sbjct: 194 SDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILN 251
Query: 271 TTLIDMYAKCGRMAQACKVF-REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
L+DMY KCG + A +F R M +KD + W+ +++GL+ NG+ A +F ++ G
Sbjct: 252 NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGP 311
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+PN T +G+L C+HAGLV++G +F SM F + P EHYGC++DLLGR+G+LDEA
Sbjct: 312 KPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAV 371
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+LI M EP+A+ W LL CR+HK DLA + +++ L+P ++G Y+LLSNIY+ S
Sbjct: 372 KLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQ 431
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
KW D A++R M +G++K GCSW+EV VH F++GDNSHP E+I +L +L +L
Sbjct: 432 KWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLM 491
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
G+VP T+ VL D+E E+ + L HSEKLA+ FGL++ + I I KNLR+CGDCH
Sbjct: 492 RLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHI 551
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KL+S++ R I++RD R+H F G CSC D+W
Sbjct: 552 FAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 188/345 (54%), Gaps = 15/345 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS-HSLIVKA 59
MI + +++ A++F M EG P +T+ VL+AC D L +R H I+K
Sbjct: 88 MISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC----DGLLNLRQLHGSILKV 143
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL+ D FV+++L++ Y G DAL VF+++ ++V W +II G+ + +E ++++
Sbjct: 144 GLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLY 203
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+R+ D ++ VL ACT L L + +H +V + + ++ + +L+D+Y KC
Sbjct: 204 KRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQ--DLILNNALLDMYCKC 261
Query: 180 GNMEKARRVFDQ-MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G++E A +F + M EKD++SWS+MI G A NGF +AL +F M+ + KP Y T++GV
Sbjct: 262 GSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGV 321
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-D 295
L AC+ G + G + M + F +P +ID+ + G++ +A K+ EM +
Sbjct: 322 LFACSHAGLVNDGWYYFQSM-KEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHE 380
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGL 339
D V W ++ ++ V +A ++ E + P + T++ L
Sbjct: 381 PDAVTWRILLGACRVHKNVDLA--IYAAKEILKLDPADAGTYILL 423
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 146/289 (50%), Gaps = 7/289 (2%)
Query: 123 LHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+HR L D+ + ++ C G + A+ +H +V G F+ +L+++Y K G
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+++AR +FD+MP++++VSW++MI Y+++ +ALD M RE ++P YT VL A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C G L L S ++ S+ + + LID Y+K G A VF EM D VVW
Sbjct: 127 CD--GLLNLRQLHGSILKVG-LESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW 183
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
N+++ G + N ++ ++++ + +T +L CT L++ GRQ
Sbjct: 184 NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVH---VH 240
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
V + ++D+ + G L++A+ L M E + I W ++AG
Sbjct: 241 VLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAG 289
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/604 (38%), Positives = 351/604 (58%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G SN + AIE + M EG + T VL ACA H LG H VK G
Sbjct: 268 MISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTG 327
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ LL++Y +C K+F ++ KNVVSWTA+I+ Y G ++ +F+
Sbjct: 328 FISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQ 387
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G +PD F+I L A L K +HGY G + + V +L+++Y KCG
Sbjct: 388 EMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCG 447
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
NME+A+ +FD + KD++SW+++I GY+ N EA +F M + L+P TM +L
Sbjct: 448 NMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILP 506
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A ASL +LE G ++ R +L + + LIDMY KCG + A ++F + +K+ +
Sbjct: 507 AAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLIS 566
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +V+G M+G + A +F Q+ GI P+ +F +L C+H+GL DEG +FF++M
Sbjct: 567 WTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMR 626
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P ++HY CMVDLL +G L EA+E I SMP+EP++ +W +LL GCR+H+ LA
Sbjct: 627 KEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLA 686
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V ++ LEP N+G YVLL+NIY+ + +W K+++ +G +G+++ GCSW+E G
Sbjct: 687 EEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGK 746
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F+ + +HP +I L+E+A +++ G P + L + L HS KL
Sbjct: 747 VHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKL 806
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFG++ + +IR+ KN RVC CHEA K ISK+ REII+RD+NRFH F +G CSC
Sbjct: 807 AVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSC 866
Query: 601 KDFW 604
+ +W
Sbjct: 867 RGYW 870
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 217/442 (49%), Gaps = 27/442 (6%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLD---CDEFVKTSLLNLYVHCGYLADALKVF 88
++ VL+ C+ + G R+H L+ + L D + L+ +Y+ CG L +A +VF
Sbjct: 93 SYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVF 152
Query: 89 DDIPD-KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
D++P +V WTA++SGY G+L E + +FR++ G++PD+++I VL LG +
Sbjct: 153 DEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSI 212
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ +HG + + G G V +L+ YAK + A VFD MP +D++SW+SMI G
Sbjct: 213 EDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGC 272
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
SNG +A+++F M E + + T++ VL ACA L L LG + + F+S
Sbjct: 273 TSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQT 332
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L L+DMY+ C K+FR M K+ V W A+++ + G G+F ++
Sbjct: 333 SLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLE 392
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFF-----NSMSRVFSLTPMIEHYGCMVDLLGRS 382
G +P+ L L+ G+ N M +V ++T ++++ +
Sbjct: 393 GTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVT------NALMEMYVKC 446
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN----QLIALEPWNSGNY 438
G ++EA +LI + + I W L+ G + + +LA + L+ L P N
Sbjct: 447 GNMEEA-KLIFDGVVSKDMISWNTLIGG---YSRNNLANEAFSLFTEMLLQLRP----NA 498
Query: 439 VLLSNIYSASHKWNDAAKIRSM 460
V ++ I A+ + + R M
Sbjct: 499 VTMTCILPAAASLSSLERGREM 520
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 197/428 (46%), Gaps = 5/428 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ + + + M G P +T VLK A + G H L+ K G
Sbjct: 167 LMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLG 226
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
V +L+ Y DA+ VFD +P ++V+SW ++ISG + G ++AI +F
Sbjct: 227 FGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFV 286
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G + DS +++ VL AC +L L + +HGY + G +A L+D+Y+ C
Sbjct: 287 RMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCS 346
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ ++F M +K++VSW++MI Y G + +F M E +P+ + + L
Sbjct: 347 DWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALH 406
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A L+ G + RN + L++MY KCG M +A +F + KD +
Sbjct: 407 AFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMIS 466
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SM 359
WN ++ G S N AF +F ++ ++PN T +L ++ GR+ ++
Sbjct: 467 WNTLIGGYSRNNLANEAFSLFTEM-LLQLRPNAVTMTCILPAAASLSSLERGREMHAYAL 525
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R + + + ++D+ + G L A L + N I W ++AG +H +
Sbjct: 526 RRGYLEDDFVAN--ALIDMYVKCGALLLARRLFDRLS-NKNLISWTIMVAGYGMHGRGRD 582
Query: 420 AEHVLNQL 427
A + Q+
Sbjct: 583 AIALFEQM 590
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/601 (40%), Positives = 348/601 (57%), Gaps = 40/601 (6%)
Query: 44 HDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDKNVVSWTA 101
H+ + R S ++ G D F + LL + L +L++FD I + N W
Sbjct: 40 HNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNT 99
Query: 102 IISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG 161
++ YI + E+A+ +++ ++ + PD+++ V+ AC K IH +V + G
Sbjct: 100 MMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVG 159
Query: 162 KGRNVFVATSLVDLYAKCGNMEKARRVFDQMP---------------------------- 193
+V+V +L+++YA CGNM AR++FD+ P
Sbjct: 160 FDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWK 219
Query: 194 ------EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
EKD+VSWS++I GY NG +EAL MF M ++ + +V VLSACA L
Sbjct: 220 LFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSI 279
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLI----DMYAKCGRMAQACKVFREMKDKDQVVWNA 303
++ G + R S L LI DMY KCG + A +VF M++K WNA
Sbjct: 280 VKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNA 339
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
++ GL++NG V+ + +F +++ G+ PN TF+G+L C H GLVDEGR F SM
Sbjct: 340 LIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKH 399
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ P ++HYGCMVDLLGR+G L+EA +LI+SMPM P+ WGALL C+ H T++ E V
Sbjct: 400 GIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERV 459
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
+LI L+P + G +VLLSNI+++ W D ++R MM +G+ K GCS +E +GVVHE
Sbjct: 460 GRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHE 519
Query: 484 FLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALA 543
FL GD +HP K+ L+E+A +LK G+ P T+ V DI+EEEK+ L HSEKLA+A
Sbjct: 520 FLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIA 579
Query: 544 FGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
FGL+T +P IRI KNLR+C DCH A KLISK REI+VRD +RFH F EG+CSC D+
Sbjct: 580 FGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDY 639
Query: 604 W 604
W
Sbjct: 640 W 640
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 190/381 (49%), Gaps = 44/381 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACA-REHDFQLGVRSHSLIVKA 59
M+R ++ ++ + A+ Y M P N+T+P V++ACA R +F G H ++K
Sbjct: 100 MMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFG-GKEIHDHVLKV 158
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL------- 112
G D D +V+ +L+N+Y CG + DA K+FD+ P + VSW +I++GY+ +G++
Sbjct: 159 GFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAW 218
Query: 113 ---------------------------EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
EEA+ MF + G++ D +V VL+AC L
Sbjct: 219 KLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLS 278
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLV----DLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+ T K IHG V G V + +L+ D+Y KCG +E A VF+ M EK + SW+
Sbjct: 279 IVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWN 338
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG-VWASSFMER 260
++I G A NG + +LDMF M+ + P T +GVL AC +G ++ G +S +E+
Sbjct: 339 ALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEK 398
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFG 319
+ N ++D+ + G + +A K+ M D W A++ +G ++
Sbjct: 399 HGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGER 458
Query: 320 VFGQLEKCGIQPNGNTFVGLL 340
V +L + +QP+ + F LL
Sbjct: 459 VGRKLIE--LQPDHDGFHVLL 477
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/561 (41%), Positives = 348/561 (62%), Gaps = 16/561 (2%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCG---YLA--DALKVFDDIPDKNVVSWTAIISG 105
++H+LI++ G D ++ SL+ Y + YL+ +L+VFD + NV W +I
Sbjct: 73 QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 132
Query: 106 YINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
I +AI ++ ++ +P+ ++ VL AC+ G ++ +H ++ + G G +
Sbjct: 133 CIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGD 192
Query: 166 VFVATSLVDLYAKCGNMEKARRVFD-QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+ +S + +YA G + +ARR+ D + E D V G EAL++F+ MQ
Sbjct: 193 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPD------RKGCFMEALEIFHQMQ 246
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
+E ++P + + VLSACA+LGAL+ G W ++ +RN + VLGT+L+DMYAKCGR+
Sbjct: 247 KEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRID 306
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A +VF +M +K+ WNA++ GL+M+G + A +F +++ I PN TFVG+L C
Sbjct: 307 LAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACA 363
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
H GLV +G FNSM + + + P IEHYGC+VDLLGR+G L EA +++ S+P EP VW
Sbjct: 364 HGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVW 423
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
GALL CR H +L E V L+ LEP NSG Y LLSNIY+ + +W + ++R +M ++
Sbjct: 424 GALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKER 483
Query: 465 GIQKIRGCSWVEVD-GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
GI+ G S +++ G VH+F++GD SHP + IY LD++ +L+ G+ P VLFD
Sbjct: 484 GIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFD 543
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
I+EEEK+ + HSEKLA+ FGLI T+P IRI KNLRVC DCH A KLIS++ REII
Sbjct: 544 IDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREII 603
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
VRD R+H F G+CSCKDFW
Sbjct: 604 VRDRIRYHHFRNGACSCKDFW 624
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 167/329 (50%), Gaps = 30/329 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI+ + N+ AI Y M F P +T+P VLKAC+ GV+ H+ +VK G
Sbjct: 129 MIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHG 188
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDD---------IPDKNVVSWTAIISGYINEGN 111
L D + +S + +Y G L +A ++ DD +PD+ +G
Sbjct: 189 LGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPDR--------------KGC 234
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
EA+ +F ++ ++P F + VL+AC LG L +WIH Y + + TS
Sbjct: 235 FMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTS 294
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
LVD+YAKCG ++ A VF++M K++ SW++MI G A +G ++A+D+F M ++ P
Sbjct: 295 LVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPN 351
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKV 289
T VGVL+ACA G ++ G+ + M R E+ P + ++D+ + G + +A KV
Sbjct: 352 EITFVGVLNACAHGGLVQKGLTIFNSM-RKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKV 410
Query: 290 FREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
+ + VW A++ +G V++
Sbjct: 411 VSSIPTEPTPAVWGALLGACRKHGNVELG 439
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/583 (39%), Positives = 346/583 (59%), Gaps = 6/583 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P+ T+ ++ C G+R H I+ G D D F+ T L+ +Y G + A KV
Sbjct: 75 PSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT----Q 143
FD + + W A+ G+ EE + ++ ++ G++ D F+ VL AC
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L+ K IH ++ G +V++ T+LVD+YA+ G ++ A VF+ MP +++VSWS+M
Sbjct: 195 ADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAM 254
Query: 204 IQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
I YA NG EAL F M E + P TMV VL ACASL ALE G ++ R
Sbjct: 255 IACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRR 314
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
S + + L+ MY +CG++ +VF M D+D V WN+++S ++GY + A +F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIF 374
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ G P TFV +L C+H GLV+EG++ F SM R + P +EHY CMVDLLGR
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGR 434
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+ +LDEA ++++ M EP VWG+LL CR+H +LAE +L ALEP N+GNYVLL
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLL 494
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
++IY+ + W++ +++ ++ +G+QK+ G W+EV ++ F+ D +PL E+I++ L
Sbjct: 495 ADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFL 554
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+LA +K G++P T VL+++E EEK+ + HSEKLALAFGLI T+ + IRI KNL
Sbjct: 555 VKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNL 614
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH K ISK +EI+VRD NRFH F G CSC D+W
Sbjct: 615 RLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 165/314 (52%), Gaps = 8/314 (2%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREH----DFQLGVRSHSLIVKAGLDCDEFV 67
+ + Y M G FT+ +VLKAC G H+ + + G + ++
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYI 219
Query: 68 KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL--HR 125
T+L+++Y G + A VF+ +P +NVVSW+A+I+ Y G EA+ FR ++ +
Sbjct: 220 MTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETK 279
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
P+S ++V VL AC L L + IHGY+ G + V ++LV +Y +CG ++
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVG 339
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+RVFD+M ++D+VSW+S+I Y +G+ ++A+ +F M P T V VL AC+
Sbjct: 340 QRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHE 399
Query: 246 GALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNA 303
G +E G M R+ + V ++D+ + R+ +A K+ ++M+ + VW +
Sbjct: 400 GLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGS 459
Query: 304 VVSGLSMNGYVKVA 317
++ ++G V++A
Sbjct: 460 LLGSCRIHGNVELA 473
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 165/341 (48%), Gaps = 16/341 (4%)
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
+S +I EG L++A+ R+L + P + ++ C LS +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAL----RVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRH 102
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+ + G ++ F+AT L+ +Y+ G+++ AR+VFD+ ++ I W+++ + G +E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACA----SLGALELGVWASSFMERNEFLSNPVLGTT 272
L +++ M R ++ + +T VL AC + L G + + R + S+ + TT
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTT 222
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL--EKCGIQ 330
L+DMYA+ G + A VF M ++ V W+A+++ + NG A F ++ E
Sbjct: 223 LVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSS 282
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEA 388
PN T V +L C +++GR + R + S+ P+I +V + GR G+LD
Sbjct: 283 PNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVI---SALVTMYGRCGKLDVG 339
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+ M + + + W +L++ +H A + +++A
Sbjct: 340 QRVFDRM-HDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLA 379
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/606 (39%), Positives = 359/606 (59%), Gaps = 37/606 (6%)
Query: 1 MIRGFVSNDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI +V N F AI FY + P +TFP VLKAC D G + H K
Sbjct: 88 MISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKL 144
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G + FV SL+++Y G+ A +FDD+P +++ SW A+ISG I GN +A+++
Sbjct: 145 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 204
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+K + ++V +L VD+YAK
Sbjct: 205 DEMRLEGIKMNFVTVVSILPV-------------------------------FVDMYAKL 233
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGV 238
G ++ A +VF+ +P KD++SW+++I GYA NG EA++++ M+ + + P T V +
Sbjct: 234 GLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSI 293
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L A A +GAL+ G+ + + + + T LID+Y KCGR+ A +F ++ +
Sbjct: 294 LPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS 353
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WNA++S ++G+ + +FG++ G++P+ TFV LL C+H+G V+EG+ F
Sbjct: 354 VTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRL 413
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + + P ++HYGCMVDLLGR+G L+ A++ IK MP++P+A +WGALL CR+H +
Sbjct: 414 MQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 472
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L + ++L ++ N G YVLLSNIY+ KW K+RS+ ++G++K G S +EV+
Sbjct: 473 LGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVN 532
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
V F G+ SHP ++IY +L L K+K+ G++P VL D+EE+EK++ L HSE
Sbjct: 533 RKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSE 592
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LA+AFG+I+T PK IRI KNLRVCGDCH A K IS+IT REI+VRD+NRFH F +G C
Sbjct: 593 RLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGIC 652
Query: 599 SCKDFW 604
SC D+W
Sbjct: 653 SCGDYW 658
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 190/366 (51%), Gaps = 42/366 (11%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+L+V AG F+ T L+NLY + G ++ + FD IP K+V +W ++IS Y++ G+
Sbjct: 39 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHF 98
Query: 113 EEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
EAI F +LL ++PD ++ VL AC G L + IH + + G NVFVA S
Sbjct: 99 HEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAAS 155
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
L+ +Y++ G AR +FD MP +D+ SW++MI G NG +ALD+ M+ E +K
Sbjct: 156 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMN 215
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
+ T+V +L PV +DMYAK G + A KVF
Sbjct: 216 FVTVVSIL---------------------------PV----FVDMYAKLGLLDSAHKVFE 244
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVD 350
+ KD + WN +++G + NG A V+ +E+C I PN T+V +L H G +
Sbjct: 245 IIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQ 304
Query: 351 EGRQFFNSMSRVFSLTPMIEHY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
+G + RV ++ + C++D+ G+ G+L +A L +P E +++ W A++
Sbjct: 305 QGMKIHG---RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAII 360
Query: 409 AGCRLH 414
+ +H
Sbjct: 361 SCHGIH 366
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 143/288 (49%), Gaps = 29/288 (10%)
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
AK +H + AGK +++F++T LV+LYA G++ +R FDQ+P+KD+ +W+SMI Y
Sbjct: 35 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 210 NGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASL-GALELGVWASSFMERNEFLSNP 267
NG EA+ FY + ++P++YT VL AC +L ++ WA F N
Sbjct: 95 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKL----GFQWNV 150
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ +LI MY++ G A +F +M +D WNA++SGL NG A V ++
Sbjct: 151 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 210
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQ--FFNSMSRVFSLTPM--IEHYGCMVDLLGRSG 383
GI+ N T V +L VD + +S +VF + P+ + + ++ ++G
Sbjct: 211 GIKMNFVTVVSIL-----PVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNG 265
Query: 384 QLDEAHELIKSM----PMEPNAIVW----------GALLAGCRLHKKT 417
EA E+ K M + PN W GAL G ++H +
Sbjct: 266 LASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV 313
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/629 (38%), Positives = 366/629 (58%), Gaps = 25/629 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI F +D F A+ F+ M EG T VL AC+ +G H+ +++
Sbjct: 268 MISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNN 327
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L + FV ++L+++Y +C + +VFD I + + W A+ISGY G E+A+ +F
Sbjct: 328 DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILF 387
Query: 120 RRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
++ GL P++ ++ V+ AC S + IHGY + G + +V +L+D+Y++
Sbjct: 388 IEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSR 447
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENL--------- 228
G M+ + +FD M +D VSW++MI GY +G AL + + MQR EN
Sbjct: 448 MGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDND 507
Query: 229 -------KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
KP T++ VL CA+L A+ G ++ RN S+ +G+ L+DMYAKCG
Sbjct: 508 DEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCG 567
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCG----IQPNGNTF 336
+ + +VF EM +K+ + WN ++ M+G + A +F + + G +PN TF
Sbjct: 568 CLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTF 627
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
+ + C+H+GL+ EG F M + P +HY C+VDLLGR+GQL+EA+EL+ +MP
Sbjct: 628 ITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMP 687
Query: 397 MEPNAI-VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
E + + W +LL CR+H+ +L E L+ LEP + +YVLLSNIYS++ WN A
Sbjct: 688 AEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAM 747
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
++R M G++K GCSW+E VH+F+ GD SHP SE+++ L+ L+ K++ G+VP
Sbjct: 748 EVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVP 807
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
T VL +++E+EK+ L HSEKLA+AFG++ T P IR+AKNLRVC DCH A K IS
Sbjct: 808 DTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFIS 867
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KI REIIVRD RFH F EG+CSC D+W
Sbjct: 868 KIMEREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 220/432 (50%), Gaps = 12/432 (2%)
Query: 7 SNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEF 66
SND F+ AI Y M G P NF FP VLKA + D + G + H+ VK G
Sbjct: 70 SND-FREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSV 128
Query: 67 -VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
V +L+N+Y CG + D KVFD I D++ VSW + I+ E+A+ FR +
Sbjct: 129 TVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQME 188
Query: 126 GLKPDSFSIVRVLTACTQLG---DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
++ SF++V V AC+ LG L K +HGY G + F +L+ +YAK G +
Sbjct: 189 NMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGD-QKTFTNNALMAMYAKLGRV 247
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
+ ++ +F+ ++D+VSW++MI ++ + EAL F M E ++ + T+ VL AC
Sbjct: 248 DDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPAC 307
Query: 243 ASLGALELGVWASSFMER-NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
+ L L++G +++ R N+ + N +G+ L+DMY C ++ +VF + + +W
Sbjct: 308 SHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELW 367
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEK-CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
NA++SG + NG + A +F ++ K G+ PN T ++ C H
Sbjct: 368 NAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAV 427
Query: 361 RV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
++ F +++ ++D+ R G++D + + SM + + + W ++ G L +
Sbjct: 428 KLGFKEDRYVQN--ALMDMYSRMGKMDISETIFDSMEVR-DRVSWNTMITGYVLSGRYSN 484
Query: 420 AEHVLNQLIALE 431
A +L+++ +E
Sbjct: 485 ALVLLHEMQRME 496
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 208/441 (47%), Gaps = 25/441 (5%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR---EHDFQLGVRSHSLIVKAGLDCDEFV 67
++ A+E + +M+ E ++FT V AC+ H +LG + H ++ G D F
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFT 233
Query: 68 KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL 127
+L+ +Y G + D+ +F+ D+++VSW +IS + EA+ FR ++ G+
Sbjct: 234 NNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGV 293
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYV-NEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
+ D +I VL AC+ L L K IH YV N FV ++LVD+Y C +E R
Sbjct: 294 ELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGR 353
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASL 245
RVFD + + I W++MI GYA NG ++AL +F M + L P TM V+ AC
Sbjct: 354 RVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHC 413
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
A + + F + + L+DMY++ G+M + +F M+ +D+V WN ++
Sbjct: 414 EAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMI 473
Query: 306 SGLSMNGYVKVAFGVFGQLEKC-----------------GIQPNGNTFVGLLCGCTHAGL 348
+G ++G A + ++++ +PN T + +L GC
Sbjct: 474 TGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAA 533
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
+ +G++ R L I +VD+ + G L+ + + MP N I W L+
Sbjct: 534 IAKGKEIHAYAIRNM-LASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLI 591
Query: 409 AGCRLHKKTDLAEHVLNQLIA 429
C +H K + A + ++A
Sbjct: 592 MACGMHGKGEEALELFKNMVA 612
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 165/364 (45%), Gaps = 50/364 (13%)
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
P ++ SW + + EAI+ + + G +PD+F+ VL A + L DL T +
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 152 WIHGYVNEAGKGRN-VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
IH + G G + V VA +LV++Y KCG + +VFD++ ++D VSW+S I
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL-------ELGVWASSFMERNEF 263
++AL+ F MQ EN++ +T+V V AC++LG + +L ++ ++ F
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTF 232
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+N L+ MYAK GR+ + +F D+D V WN ++S S + A F
Sbjct: 233 TNN-----ALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRL 287
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF---------------------------- 355
+ G++ +G T +L C+H +D G++
Sbjct: 288 MVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCR 347
Query: 356 -FNSMSRVFS--LTPMIEHYGCMVDLLGRSGQLDEAH-----ELIKSMPMEPNAIVWGAL 407
S RVF L IE + M+ R+G LDE E+IK + PN ++
Sbjct: 348 QVESGRRVFDHILGRRIELWNAMISGYARNG-LDEKALILFIEMIKVAGLLPNTTTMASV 406
Query: 408 LAGC 411
+ C
Sbjct: 407 MPAC 410
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 254/676 (37%), Positives = 361/676 (53%), Gaps = 93/676 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACA-----------REHDFQLG 49
MIR ++ + A Y SM + N+T+P +++AC+ H +LG
Sbjct: 49 MIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLG 108
Query: 50 VRSHSLIVKAGLDC--------------------DEFVKTSLLNLYVHCG---------- 79
S + ++C D S+L Y+ G
Sbjct: 109 FDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYH 168
Query: 80 ---------------------YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+ +A K+FD++ +K++V+W+A+I+ + EEAI
Sbjct: 169 QMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRT 228
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F + G+ D V L+AC L ++ K IH + G + + +L+ +Y+K
Sbjct: 229 FVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSK 288
Query: 179 CGNMEKARRVFDQ-------------------------------MPEKDIVSWSSMIQGY 207
CG++ AR++FD+ MPEKD+VSWSSMI GY
Sbjct: 289 CGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGY 348
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A N E L +F MQ KP+ T+V V+SACA L ALE G W ++++RN N
Sbjct: 349 AQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINV 408
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+LGTTLIDMY KCG + A +VF M +K WNA++ GL+MNG V+ + +F ++KC
Sbjct: 409 ILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKC 468
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+ PN TF+G+L C H GLVDEG+ F SM + P ++HYGCMVDLLGR+G+L E
Sbjct: 469 HVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQE 528
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A EL+ MPM P+ WGALL C+ H +++ V +LI L+P + G +VLLSNIY++
Sbjct: 529 AEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYAS 588
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
KW+D +IR MM + KI GCS +E +GV+HEFL GD +HP + I L E+A K
Sbjct: 589 KGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMK 648
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
LK G+ P + VL D++EEEK+ L HSEKLA+AFGLI +P IRI KNLR+C DC
Sbjct: 649 LKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDC 708
Query: 568 HEAIKLISKITGREII 583
H A KLISK R+I+
Sbjct: 709 HTAAKLISKAFCRKIV 724
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 149/336 (44%), Gaps = 44/336 (13%)
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
++H Y ++F+ I + N W +I YI + A +++ +L L D+++
Sbjct: 25 FIHIDY---TRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTY 81
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
++ AC+ AK +H +V + G +V+V +L++ ++ C NM A RVF++
Sbjct: 82 PLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSV 141
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
D VSW+S++ GY G +EA +++ M
Sbjct: 142 LDSVSWNSILAGYIEIGNVEEAKHIYHQMP------------------------------ 171
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
ER+ SN ++I ++ G + +ACK+F EM +KD V W+A+++ N
Sbjct: 172 ----ERSIIASN-----SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMY 222
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
+ A F + K G+ + V L C + +V+ G+ +S+S I
Sbjct: 223 EEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGK-LIHSLSLKIGTESYINLQNA 281
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++ + + G + A +L + + I W ++++G
Sbjct: 282 LIYMYSKCGDIMVARKLFDEAYL-LDLISWNSMISG 316
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/607 (39%), Positives = 359/607 (59%), Gaps = 4/607 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V N F A+ + +MR + P +FTFP V KA A G + H L +K G
Sbjct: 79 LISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGG 138
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV S ++Y G+ DA +FD++P +N+ +W A IS + + +AI F+
Sbjct: 139 MIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFK 198
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L +P+S + L AC + L+ + +H ++ G +V VA L+D Y KCG
Sbjct: 199 EFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCG 258
Query: 181 NMEKARRVFDQM-PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A VF+++ K++VSW SM+ N + A +F ++E ++P + + VL
Sbjct: 259 DIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVL 317
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACA LG LELG + + N +G+ L+DMY KCG + A +VF E+ +++ V
Sbjct: 318 SACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLV 377
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQ--LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
WNA++ G + G + +A +F + L GI+P+ T + +L C+ G V+ G Q F
Sbjct: 378 TWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFE 437
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
SM + + P EH+ C+VDLLGRSG +D A+E I++M ++P VWGALL CR+H KT
Sbjct: 438 SMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKT 497
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
+L + +L L+ +SGN+V+LSN+ +++ +W +A +R M D GI+K G SW+ V
Sbjct: 498 ELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAV 557
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
+H F D+SH + +I + L +L +K AG+VP T+ LFD+E+EEK + HS
Sbjct: 558 KNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHS 617
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EK+ALAFGLI IRI KNLR+CGDCH AIK IS+I GREIIVRDN+RFH F +G
Sbjct: 618 EKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGC 677
Query: 598 CSCKDFW 604
CSCKD+W
Sbjct: 678 CSCKDYW 684
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 187/413 (45%), Gaps = 5/413 (1%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLD-CDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
+L++ H LG H+ I++ + F+ L+N+Y L A V +
Sbjct: 12 LLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLR 71
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
VV+WT++ISG ++ A+ F + ++P+ F+ V A + T K IH
Sbjct: 72 TVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIH 131
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
G + G +VFV S D+Y K G A +FD+MP++++ +W++ I +
Sbjct: 132 GLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSL 191
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
+A+ F + +P T L+AC + L LG +F+ R + + + LI
Sbjct: 192 DAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLI 251
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
D Y KCG + A VF + ++ VV W ++++ L N + A VF Q K ++P
Sbjct: 252 DFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARK-EVEPTD 310
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
+L C G ++ GR ++++ + I +VD+ G+ G ++ A ++
Sbjct: 311 FMISSVLSACAELGGLELGRS-VHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFS 369
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYS 446
+P E N + W A++ G D+A + ++ +YV L +I S
Sbjct: 370 ELP-ERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILS 421
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/619 (39%), Positives = 369/619 (59%), Gaps = 17/619 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE--GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
M+ G+ + + HA+ SM+ + P T +L A++ G H+ ++
Sbjct: 197 MLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIR 256
Query: 59 AGLDCDE----------FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
A L + + T+LL++Y CG L A +VFD +P +N V+W+A+I G++
Sbjct: 257 ACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 316
Query: 109 EGNLEEAINMFRRLLHRGL---KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+ +A +F+ +L +GL P S I L AC L L + +H + ++G +
Sbjct: 317 CSRMTQAFLLFKAMLAQGLCFLSPTS--IASALRACASLDHLRMGEQLHALLAKSGVHAD 374
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
+ SL+ +YAK G +++A +FD+M KD VS+S+++ GY NG +EA +F MQ
Sbjct: 375 LTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 434
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
N++P+ TMV ++ AC+ L AL+ G + + S + LIDMYAKCGR+
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
+ +VF M +D V WN +++G ++G K A +F ++ G P+G TF+ LL C+H
Sbjct: 495 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 554
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
+GLV EG+ +F+ M + LTP +EHY CMVDLL R G LDEA+E I+SMP+ + VW
Sbjct: 555 SGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 614
Query: 406 ALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKG 465
ALL CR++K DL + V + L P +GN+VLLSNIYSA+ ++++AA++R + +G
Sbjct: 615 ALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG 674
Query: 466 IQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIE 525
+K GCSW+E++G +H F+ GD SHP S +IY +LD + +K G+ P T VL D+E
Sbjct: 675 FKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLE 734
Query: 526 EEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVR 585
EEEK+ L CHSEKLA+A+G+++ + I + KNLRVCGDCH IK IS + R IIVR
Sbjct: 735 EEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVR 794
Query: 586 DNNRFHCFIEGSCSCKDFW 604
D NRFH F G CSC DFW
Sbjct: 795 DANRFHHFKNGQCSCGDFW 813
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/432 (31%), Positives = 225/432 (52%), Gaps = 23/432 (5%)
Query: 1 MIRGFVSNDCFQHA--IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
+IR + S+ A + Y M P N+TFPF LKAC+ D G H +
Sbjct: 94 LIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIH 153
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
AGL D FV T+LL++YV C L DA +F +P +++V+W A+++GY + G A+
Sbjct: 154 AGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAH 213
Query: 119 FRRL---LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-------VNEAGKGR---N 165
+ +HR L+P++ ++V +L Q G L+ +H Y N K +
Sbjct: 214 LLSMQMQMHR-LRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDG 272
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
V + T+L+D+YAKCG++ ARRVFD MP ++ V+WS++I G+ +A +F M
Sbjct: 273 VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLA 332
Query: 226 EN---LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
+ L P ++ L ACASL L +G + + ++ ++ G +L+ MYAK G
Sbjct: 333 QGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGL 390
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ QA +F EM KD V ++A+VSG NG + AF VF +++ C ++P+ T V L+
Sbjct: 391 IDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPA 450
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
C+H + GR S+ + L ++D+ + G++D + ++ MP + +
Sbjct: 451 CSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR-DIV 508
Query: 403 VWGALLAGCRLH 414
W ++AG +H
Sbjct: 509 SWNTMIAGYGIH 520
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 183/390 (46%), Gaps = 58/390 (14%)
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA--INMFRRLLHRGLKPDSF 132
++ G+L+ A +FD IP +V ++ +I Y + A ++++RR+L + P+++
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ L AC+ L D + IH + AG ++FV+T+L+D+Y KC + A +F M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVLSACASLGALEL 250
P +D+V+W++M+ GYA +G A+ +MQ + L+P T+V +L A GAL
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 251 GVWASSFMERNEFLSNP----------VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
G ++ R SN +LGT L+DMYAKCG + A +VF M +++V
Sbjct: 247 GTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306
Query: 301 WNAVVSGLSMNGYVKVAFGVF------------------------------------GQL 324
W+A++ G + + AF +F L
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALL 366
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
K G+ + LL AGL+D+ F+ M+ +++ Y +V ++G+
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS-----YSALVSGYVQNGR 421
Query: 385 LDEAHELIKSMP---MEPNAIVWGALLAGC 411
+EA + K M +EP+A +L+ C
Sbjct: 422 AEEAFLVFKKMQACNVEPDAATMVSLIPAC 451
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/670 (36%), Positives = 367/670 (54%), Gaps = 66/670 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G F A++ + M EG P+ F VL +CA +G + HS ++K G
Sbjct: 134 MVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLG 193
Query: 61 LDCDEFVKTSLL-------------------------------NLYVHCGYLADALKVFD 89
L V S+L +LY H G + AL +F+
Sbjct: 194 LSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFE 253
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLS 148
++ ++++VSW AII+GY G + A+ F R+L ++PD F++ VL+AC L L
Sbjct: 254 NMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLK 313
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR--------------------- 187
K +H Y+ G + + +L+ YAK G++E ARR
Sbjct: 314 MGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEG 373
Query: 188 ------------VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
VFD M +D+++W++MI GY NG EA+++F +M R +P +T+
Sbjct: 374 YVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTL 433
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM-K 294
VLSACASL L G R+ + + +I +YA+ G + A +VF ++
Sbjct: 434 AAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICW 493
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
K+ V W +++ L+ +G + A +F ++ + G++P+ T++G+ CTHAG +D+G++
Sbjct: 494 RKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKR 553
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ M + P + HY CMVDLL R+G L EAHE I+ MP+ P+ +VWG+LLA CR+
Sbjct: 554 YYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVR 613
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K DLAE +L++++P NSG Y L+N+YSA +WNDAA+I + DK ++K G SW
Sbjct: 614 KNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSW 673
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
V VH F D HP + I K E+ ++K AGFVP + VL D+++E K+ L+
Sbjct: 674 THVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLS 733
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFGLI+T K +RI KNLRVC DCH AIK ISK+ REIIVRD RFH F
Sbjct: 734 RHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFR 793
Query: 595 EGSCSCKDFW 604
+G CSCKD+W
Sbjct: 794 DGYCSCKDYW 803
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 178/416 (42%), Gaps = 66/416 (15%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
+ F SLL++Y G LADA VF +P+++ VSWT ++ G G +A+ F ++
Sbjct: 96 NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
GL P F + VL++C + +H +V + G V VA S++ +Y KCG+ E
Sbjct: 156 GEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAE 215
Query: 184 KARRVFDQMP-------------------------------EKDIVSWSSMIQGYASNGF 212
AR VF++M E+ IVSW+++I GY NG
Sbjct: 216 TARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGL 275
Query: 213 PKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMER----------N 261
AL F M +++P+ +T+ VLSACA+L L++G S++ R N
Sbjct: 276 DDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMN 335
Query: 262 EFLS-----------------------NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+S N + T L++ Y K G QA +VF M ++D
Sbjct: 336 ALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDV 395
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ W A++ G NG A +F + + G +PN +T +L C + G+Q
Sbjct: 396 IAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCR 455
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R + ++ + RSG + A + + + W +++ H
Sbjct: 456 AIRSLQ-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQH 510
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 4/204 (1%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
RN F SL+ +YAK G + AR VF QMPE+D VSW+ M+ G G +A+ F +M
Sbjct: 95 RNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDM 154
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
E L P + + VLS+CA+ A +G SF+ + S + +++ MY KCG
Sbjct: 155 VGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDA 214
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
A VF MK + + WNA+VS + G + +A +F +E+ I ++ ++ G
Sbjct: 215 ETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIV----SWNAIIAGY 270
Query: 344 THAGLVDEGRQFFNSMSRVFSLTP 367
GL D +FF+ M S+ P
Sbjct: 271 NQNGLDDMALKFFSRMLTASSMEP 294
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/631 (38%), Positives = 366/631 (58%), Gaps = 39/631 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ N A E +N M + + N A H+ +L + + ++
Sbjct: 145 MLSGYAQNGFVDEAREVFNKMPHRNSISWNGLL------AAYVHNGRL--KEARRLFESQ 196
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + L+ YV L DA ++FD +P ++V+SW +ISGY G+L +A +
Sbjct: 197 SNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQA----K 252
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLG----------------DLSTAKWIHGYVN------ 158
RL + D F+ +++ Q G ++S + GYV
Sbjct: 253 RLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVI 312
Query: 159 -----EAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
EA RN+ +++ Y + G + +AR++FD MP++D VSW+++I GYA NG
Sbjct: 313 AGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHY 372
Query: 214 KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
+EAL+MF M+R+ T LS CA + ALELG + + F + +G L
Sbjct: 373 EEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNAL 432
Query: 274 IDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+ MY KCG +A VF +++KD V WN +++G + +G+ + A +F ++K G++P+
Sbjct: 433 LGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDE 492
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
T VG+L C+H+GL+D G ++F SM R +++ P +HY CM+DLLGR+G+L+EA L++
Sbjct: 493 ITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMR 552
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWND 453
+MP +P A WGALL R+H T+L E + +EP NSG YVLLSN+Y+AS +W D
Sbjct: 553 NMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVD 612
Query: 454 AAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF 513
K+RS M + G+QK+ G SWVEV +H F VGD HP ++IY+ L+EL K++ G+
Sbjct: 613 VGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGY 672
Query: 514 VPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKL 573
V +T VL D+EEEEK++ L HSEKLA+AFG++T IR+ KNLRVC DCH AIK
Sbjct: 673 VSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKH 732
Query: 574 ISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
ISKI GR II+RD++RFH F EG CSC D+W
Sbjct: 733 ISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 180/387 (46%), Gaps = 59/387 (15%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D F +L YV L +A K+FD +P K+VVSW A++SGY G ++EA +F ++
Sbjct: 107 DLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMP 166
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAK--------W--------IHGYV--NEAGKGRN 165
HR +S S +L A G L A+ W + GYV N G R
Sbjct: 167 HR----NSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQ 222
Query: 166 VFVATSLVDL---------YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+F + D+ YA+ G++ +A+R+F++ P +D+ +W++M+ GY NG EA
Sbjct: 223 LFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEA 282
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG----TT 272
F M +N + G + + A EL F + P T
Sbjct: 283 RKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGEL------------FEAMPCRNISSWNT 330
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
+I Y + G +AQA K+F M +D V W A++SG + NG+ + A +F ++++ G N
Sbjct: 331 MITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSN 390
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD--LLG---RSGQLDE 387
+TF L C ++ G+Q + + T GC V LLG + G DE
Sbjct: 391 RSTFSCALSTCADIAALELGKQVHGQVVKAGFET------GCFVGNALLGMYFKCGSTDE 444
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLH 414
A+++ + + E + + W ++AG H
Sbjct: 445 ANDVFEGIE-EKDVVSWNTMIAGYARH 470
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 169/397 (42%), Gaps = 83/397 (20%)
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
D D ++ ++ G+ AL+VF+ +P ++ VS+ A+ISGY+ A ++F +
Sbjct: 43 DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDK 102
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ R D FS +LT GYV G
Sbjct: 103 MPER----DLFSWNVMLT---------------GYVRNRRLG------------------ 125
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+A ++FD MP+KD+VSW++M+ GYA NGF EA ++F M N + G+L+A
Sbjct: 126 --EAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRN----SISWNGLLAA 179
Query: 242 CASLGAL-------------ELGVW---ASSFMERNE-------FLSNPVLG----TTLI 274
G L EL W +++RN F PV T+I
Sbjct: 180 YVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMI 239
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
YA+ G ++QA ++F E +D W A+VSG NG V A F ++ N
Sbjct: 240 SGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMP----VKNEI 295
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
++ +L G + + F +M I + M+ G++G + +A +L
Sbjct: 296 SYNAMLAGYVQYKKMVIAGELFEAMP-----CRNISSWNTMITGYGQNGGIAQARKLFDM 350
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
MP + + + W A+++G + + E LN + ++
Sbjct: 351 MP-QRDCVSWAAIISG---YAQNGHYEEALNMFVEMK 383
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 49/249 (19%)
Query: 162 KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
K ++ + + + G+ + A RVF+ MP + VS+++MI GY N A D+F
Sbjct: 42 KDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFD 101
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
M ER+ F N ++ Y +
Sbjct: 102 KMP----------------------------------ERDLFSWN-----VMLTGYVRNR 122
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
R+ +A K+F M KD V WNA++SG + NG+V A VF ++ N ++ GLL
Sbjct: 123 RLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMP----HRNSISWNGLLA 178
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
H G + E R+ F S S ++ + C++ + L +A +L MP+ +
Sbjct: 179 AYVHNGRLKEARRLFESQSNWELIS-----WNCLMGGYVKRNMLGDARQLFDRMPVR-DV 232
Query: 402 IVWGALLAG 410
I W +++G
Sbjct: 233 ISWNTMISG 241
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 14/138 (10%)
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
+ KD D V WN +S NG+ A VF + + + ++ ++ G
Sbjct: 40 KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPR----RSSVSYNAMISGYLRNAKFSL 95
Query: 352 GRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
R F+ M +FS M+ Y R+ +L EAH+L MP + + + W A+L+
Sbjct: 96 ARDLFDKMPERDLFSWNVMLTGY-------VRNRRLGEAHKLFDLMP-KKDVVSWNAMLS 147
Query: 410 GCRLHKKTDLAEHVLNQL 427
G + D A V N++
Sbjct: 148 GYAQNGFVDEAREVFNKM 165
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/572 (41%), Positives = 352/572 (61%), Gaps = 42/572 (7%)
Query: 71 LLNLYVHCGY-----LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
+LNL +H Y + +L +F D ++ +TA I+ G ++A ++ +LL
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSS 124
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
+ P+ F+ +L +C+ + K IH +V + G G + +VAT LVD+YAK G++ A
Sbjct: 125 EINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSA 180
Query: 186 RRVFDQMPEK-------------------------------DIVSWSSMIQGYASNGFPK 214
++VFD+MPE+ DIVSW+ MI GYA +GFP
Sbjct: 181 QKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPN 240
Query: 215 EALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
+AL +F + E KP+ T+V LSAC+ +GALE G W F++ + N + T L
Sbjct: 241 DALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGL 300
Query: 274 IDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK-CGIQPN 332
IDMY+KCG + +A VF + KD V WNA+++G +M+GY + A +F +++ G+QP
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
TF+G L C HAGLV+EG + F SM + + + P IEHYGC+V LLGR+GQL A+E I
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
K+M M+ ++++W ++L C+LH L + + LI L NSG YVLLSNIY++ +
Sbjct: 421 KNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYE 480
Query: 453 DAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAG 512
AK+R++M +KGI K G S +E++ VHEF GD H S++IY+ L +++ ++K+ G
Sbjct: 481 GVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHG 540
Query: 513 FVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIK 572
+VP T+ VL D+EE EK+ L HSE+LA+A+GLI+T P ++I KNLRVC DCH K
Sbjct: 541 YVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTK 600
Query: 573 LISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LISKITGR+I++RD NRFH F +GSCSC DFW
Sbjct: 601 LISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 184/341 (53%), Gaps = 52/341 (15%)
Query: 19 NSMRNEGFL-----------PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFV 67
N ++++ FL P FTF +LK+C+ + G H+ ++K GL D +V
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYV 163
Query: 68 KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE-------------- 113
T L+++Y G + A KVFD +P++++VS TA+I+ Y +GN+E
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI 223
Query: 114 -----------------EAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+A+ +F++LL G KPD ++V L+AC+Q+G L T +WIH
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHV 283
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+V + NV V T L+D+Y+KCG++E+A VF+ P KDIV+W++MI GYA +G+ ++
Sbjct: 284 FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQD 343
Query: 216 ALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TT 272
AL +F MQ L+P T +G L ACA G + G+ M + E+ P +
Sbjct: 344 ALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ-EYGIKPKIEHYGC 402
Query: 273 LIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNG 312
L+ + + G++ +A + + M D D V+W++V+ ++G
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+ + A+ + + EG P T L AC++ + G H + +
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS 288
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ + V T L+++Y CG L +A+ VF+D P K++V+W A+I+GY G ++A+ +F
Sbjct: 289 RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLF 348
Query: 120 RRLLH-RGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYA 177
+ GL+P + + L AC G ++ + E G + LV L
Sbjct: 349 NEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLG 408
Query: 178 KCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ G +++A M + D V WSS++
Sbjct: 409 RAGQLKRAYETIKNMNMDADSVLWSSVL 436
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 77/190 (40%), Gaps = 29/190 (15%)
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
PVL L YA G++ + +F + D D ++ A ++ S+NG AF ++ QL
Sbjct: 64 PVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS 123
Query: 327 CGIQPNGNTFVGLLCGC---------TH-------------AGLVD---EGRQFFNSMSR 361
I PN TF LL C TH GLVD +G S +
Sbjct: 124 SEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVV-SAQK 182
Query: 362 VFSLTP--MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
VF P + M+ + G ++ A L SM E + + W ++ G H +
Sbjct: 183 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM-CERDIVSWNVMIDGYAQHGFPND 241
Query: 420 AEHVLNQLIA 429
A + +L+A
Sbjct: 242 ALMLFQKLLA 251
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/605 (38%), Positives = 351/605 (58%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G + A + M+ + + N T +L AC + H ++
Sbjct: 206 MIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRH 265
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G DE V + Y CG L A +VF + K V SW A+I G G+ +A+N++
Sbjct: 266 GFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLY 325
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ + GL PD F+I +L A L L K +HG+V G + F+ SL+ LY C
Sbjct: 326 IQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHC 385
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G AR +FD M EK VSW++MI GY+ NG P++AL +F + + +P +V VL
Sbjct: 386 GESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVL 445
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+ AL LG + + + + + + IDMYAK G + ++ VF +K+KD
Sbjct: 446 GACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLA 505
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA+++ ++G + + +F ++ K G P+G TF+G+L C+HAGLV+EG ++FN M
Sbjct: 506 SWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEM 565
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ P +EHY C++D+LGR+G+LD+A L+ MP +P++ VW +LL+ CR + ++
Sbjct: 566 QNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEI 625
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ V +L+ LEP N NYV LSN+Y+ S +W+D ++R M+ D G+QK GCSW+E+ G
Sbjct: 626 GQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGG 685
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F+ GDN P S+++ +L K+ G+ P T VL D++EE+K L HSEK
Sbjct: 686 KVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEK 745
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+ FGL+ T +RI KNLR+C DCH A K +S++TGREII+RDN RFH F +G CS
Sbjct: 746 LAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCS 805
Query: 600 CKDFW 604
C D+W
Sbjct: 806 CGDYW 810
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 219/423 (51%), Gaps = 17/423 (4%)
Query: 1 MIRGFVSN----DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLI 56
+I GF N DCF +E EG LP T VL CARE D Q+G+R H L
Sbjct: 103 IISGFSENGFSKDCFDMLVEMMAG--EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLA 160
Query: 57 VKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
VK GL D V SL+++Y CGYL +A +FD KN VSW +I G +G + EA
Sbjct: 161 VKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAF 220
Query: 117 NMFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
N+FR + + ++ + +++ +L AC ++ L + K +HGY G + VA V
Sbjct: 221 NLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAA 280
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
YAKCG + A RVF M K + SW+++I G A NG P++AL+++ M L P+++T+
Sbjct: 281 YAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTI 340
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+L A A L +L G F+ R+ + +G +L+ +Y CG + A +F M++
Sbjct: 341 GSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEE 400
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
K V WNA++SG S NG + A +F +L G QP+ V +L C+ + G++
Sbjct: 401 KSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKE- 459
Query: 356 FNSMSRVFSLTPMIEH---YGC-MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ ++L ++ C +D+ +SG + E+ + + + A W A++A
Sbjct: 460 ----THCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLA-SWNAIIAAY 514
Query: 412 RLH 414
+H
Sbjct: 515 GVH 517
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 211/411 (51%), Gaps = 14/411 (3%)
Query: 8 NDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEF 66
N+ + AI+ F + + F NFTFP V+KAC D LG H +++K GL D F
Sbjct: 8 NELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVF 67
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL--H 124
V +L+ +Y G++ A+KVF +P +N+VSW +IISG+ G ++ +M ++
Sbjct: 68 VGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGE 127
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
GL PD ++V VL C + D+ IHG + G +V V SLVD+Y+KCG + +
Sbjct: 128 EGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTE 187
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACA 243
A+ +FD+ K+ VSW++MI G + G+ EA ++F MQ +E+++ T++ +L AC
Sbjct: 188 AQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACL 247
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+ L + R+ F + ++ + YAKCG + A +VF M+ K WNA
Sbjct: 248 EISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNA 307
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-- 361
++ G + NG + A ++ Q+ G+ P+ T LL H + G++ + R
Sbjct: 308 LIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHG 367
Query: 362 --VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ S + ++ L G+ A L M E +++ W A+++G
Sbjct: 368 LEIDSFIGI-----SLLSLYIHCGESSSARLLFDGME-EKSSVSWNAMISG 412
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/532 (43%), Positives = 343/532 (64%), Gaps = 15/532 (2%)
Query: 83 DALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVR------ 136
DA + FD+IPD N V TA+ SGY+ + ++ +FR ++ DS S+V
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMI----ASDSASVVDEAAALV 57
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG--NMEKARRVFDQMPE 194
+A ++ D +H + + G RN V +++D YAK G ++E AR+VFD M E
Sbjct: 58 AFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-E 116
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQR--ENLKPEYYTMVGVLSACASLGALELGV 252
+D+VSW+SMI YA NG EA+ ++ M +K + VL ACA GA++ G
Sbjct: 117 RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGK 176
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ + R N +GT+++DMY+KCGR+ A + FR++K+K+ + W+A+++G M+G
Sbjct: 177 HIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHG 236
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ A +F ++++ G++PN TF+ +L C+HAGL+DEGR ++N+M + F + +EHY
Sbjct: 237 RGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHY 296
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEP 432
GCMVDLLGR+G LDEA+ LIK M ++P+A +WGALL+ CR+HK +LAE + +L L+
Sbjct: 297 GCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDA 356
Query: 433 WNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHP 492
NSG YVLLSNIY+ + W D +IR ++ + I+K G S E+ G ++ F VGD SHP
Sbjct: 357 SNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHP 416
Query: 493 LSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPK 552
+IYS L++L +++ AG+VP T VL D++EEEK+ L HSEKLA+AF L+ + P+
Sbjct: 417 QHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPR 476
Query: 553 DVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
VI I KNLRVC DCH A+K I+KIT REII+RD RFH F +G CSC+D+W
Sbjct: 477 SVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 179/325 (55%), Gaps = 9/325 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
M G+V N+ H++E + +M + + A AR D + H+LI K
Sbjct: 21 MASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAK 80
Query: 59 AGLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
G + + V ++L+ Y G L A KVFD + +++VVSW ++I+ Y G EAI
Sbjct: 81 IGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAI 139
Query: 117 NMFRRLLH--RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
++ ++L+ G+K ++ ++ VL AC G + T K IH V G NV+V TS+VD
Sbjct: 140 GLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVD 199
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+Y+KCG +E A R F ++ EK+I+SWS+MI GY +G +EAL++F M+R L+P Y T
Sbjct: 200 MYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYIT 259
Query: 235 MVGVLSACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
+ VL+AC+ G L+ G W ++ + + ++D+ + G + +A + +EM
Sbjct: 260 FISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEM 319
Query: 294 KDK-DQVVWNAVVSGLSMNGYVKVA 317
K K D +W A++S ++ V++A
Sbjct: 320 KVKPDAAIWGALLSACRIHKNVELA 344
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/531 (41%), Positives = 324/531 (61%), Gaps = 1/531 (0%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG ++DA VFD +P ++VVSWT +I+GY EAI + +L +P+ F+
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+L A G S + +H + +V+V ++L+D+YA+C M+ A VFD++
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
K+ VSW+++I G+A + L F MQR ++T + SA A +GALE G W
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ + ++ +G T++ MYAK G M A KVF M +D V WN +++ L+ G
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
K A F ++ KCGIQ N TF+ +L C+H GLV EG+ +F+ M + +++ P I+HY
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYV 299
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
VDLLGR+G L EA + MPMEP A VWGALL CR+HK + ++ + + L+P
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 359
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPL 493
++G VLL NIY+++ KWNDAA++R MM G++K CSWV+++ VH F+ D++HP
Sbjct: 360 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPK 419
Query: 494 SEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKD 553
S IY +E+ ++K AG+VP T HVL I E+E++ L HSEK+ALAF LI
Sbjct: 420 SGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGA 479
Query: 554 VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI KN+R+CGDCH A K +SK+ REI+VRD NRFH F EGSCSC D+W
Sbjct: 480 SIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 160/317 (50%), Gaps = 1/317 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N AI M F P FTF +LKA +G + H+L VK
Sbjct: 29 LIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYN 88
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D +V ++LL++Y C + A+ VFD + KN VSW A+I+G+ + + E + F
Sbjct: 89 WDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFA 148
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G F+ + +A ++G L +W+H ++ ++G+ FV +++ +YAK G
Sbjct: 149 EMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSG 208
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M AR+VFD+M ++D+V+W++M+ A G KEA+ F +++ ++ T + VL+
Sbjct: 209 SMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLT 268
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK-VFREMKDKDQV 299
AC+ G ++ G M+ + +D+ + G + +A VF+ +
Sbjct: 269 ACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAA 328
Query: 300 VWNAVVSGLSMNGYVKV 316
VW A++ M+ K+
Sbjct: 329 VWGALLGACRMHKNAKM 345
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/532 (41%), Positives = 339/532 (63%), Gaps = 17/532 (3%)
Query: 2 IRGFVSNDCFQHAIEFYNS-MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
IRGF+ ++ + A+ Y ++ +G P N+T+P + KACAR ++G ++ G
Sbjct: 50 IRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLG 109
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FV ++++L V CG L A K+FD +++VSW ++I+GY+ G EA+N +R
Sbjct: 110 FDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYR 169
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+KPD +++ V+++C QL DL + H Y+ E G V +A +L+D+Y KCG
Sbjct: 170 EMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCG 229
Query: 181 NMEKARRVFD----------------QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
N+E AR++FD +MP+KD+V W++MI GY KEAL +F MQ
Sbjct: 230 NLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQ 289
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
N+ P+ TMV LSAC+ LGAL++G+W ++E++E N LGT LIDMYAKCG++
Sbjct: 290 AMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKIT 349
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
+A +VF+E+ ++ + W A++SGL+++G A F ++ + P+ TF+GLL C
Sbjct: 350 KAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACC 409
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
H GLV+EGR++F+ MS F+L+P ++HY CMVDLLGR+G L+EA ELIKSMP+E +A+VW
Sbjct: 410 HGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVW 469
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
GAL CR+H + E ++L+ ++P +SG YVLL+N+Y + W +A K R +M +
Sbjct: 470 GALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQR 529
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
G++K GCS +EV+G+V+EF+V D SHP SE+IY L +L +L+ P
Sbjct: 530 GVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELVECTPV 581
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 186/353 (52%), Gaps = 19/353 (5%)
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAK 151
+ N SW I G+++ N EA+ +++R+L G KPD+++ + AC +L +
Sbjct: 40 NPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGS 99
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
I G+V G ++FV+ +++ L CG+++ AR++FD+ +D+VSW+SMI GY G
Sbjct: 100 EILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRG 159
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
+ EAL+ + M+ E +KP+ TM+GV+S+CA L L+LG + ++E N L
Sbjct: 160 WAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLAN 219
Query: 272 TLIDMYAKCGRMAQACK----------------VFREMKDKDQVVWNAVVSGLSMNGYVK 315
L+DMY KCG + A K +F EM DKD V WNA++ G K
Sbjct: 220 ALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGK 279
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A +F +++ I P+ T V L C+ G +D G + + + L+ + +
Sbjct: 280 EALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTAL 338
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+D+ + G++ +A ++ + +P N++ W A+++G LH A +++I
Sbjct: 339 IDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGNAHGAIAYFSEMI 390
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 178/333 (53%), Gaps = 20/333 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V A+ FY M+ EG P T V+ +CA+ D LG SH I + G
Sbjct: 151 MINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENG 210
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWT----------------AIIS 104
L + +L+++Y+ CG L A K+FD + +K +VSWT A+I
Sbjct: 211 LKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIG 270
Query: 105 GYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR 164
GY++ +EA+ +F + + PD ++V L+AC+QLG L WIH Y+ +
Sbjct: 271 GYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSL 330
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
NV + T+L+D+YAKCG + KA +VF ++P ++ ++W+++I G A +G A+ F M
Sbjct: 331 NVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMI 390
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGR 282
++ P+ T +G+LSAC G +E G S M ++F +P L + ++D+ + G
Sbjct: 391 DNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMS-SKFNLSPKLKHYSCMVDLLGRAGL 449
Query: 283 MAQACKVFREMK-DKDQVVWNAVVSGLSMNGYV 314
+ +A ++ + M + D VVW A+ ++G V
Sbjct: 450 LEEAEELIKSMPIEADAVVWGALFFACRIHGNV 482
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/591 (37%), Positives = 353/591 (59%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
+ + + M G P FT+P +L+ C + LG + H L +K G + D +V L++
Sbjct: 329 SFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLID 388
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y G+L A ++ + + K+VVSWT++I+GY+ +EA+ F+ + G+ PD+
Sbjct: 389 MYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIG 448
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+ ++AC + + + IH V +G +V + +LV+LYA+CG ++A +F+ +
Sbjct: 449 LASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIE 508
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
KD ++W+ M+ G+A +G +EAL++F M + +K +T V +SA A+L ++ G
Sbjct: 509 HKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQ 568
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ + + S + LI +Y KCG + A F EM +++ V WN +++ S +G+
Sbjct: 569 IHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGW 628
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
A +F Q+++ G++PN TF+G+L C+H GLV+EG +F SMS + P +HY
Sbjct: 629 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYA 688
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
C+VD+LGR+GQLD A + ++ MP+ NA+VW LL+ CR+HK ++ E L+ LEP
Sbjct: 689 CVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPH 748
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPL 493
+S +YVLLSN Y+ + KW +R MM D+G++K G SW+EV VVH F VGD HPL
Sbjct: 749 DSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPL 808
Query: 494 SEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKD 553
+ +IY L +L +L G++ + + E+E+K HSEKLA+AFGL++ P
Sbjct: 809 AHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSM 868
Query: 554 VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+R+ KNLRVC DCH +K S++ GREI++RD RFH F G+CSC DFW
Sbjct: 869 PLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 222/403 (55%), Gaps = 2/403 (0%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ A+E + MR G+ P T +L ACA D G + HS ++KAG+ D ++ SL
Sbjct: 226 ESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSL 285
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
L+LYV CG + +AL++F NVV W ++ Y +L ++ ++F +++ G++P+
Sbjct: 286 LDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNE 345
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
F+ +L CT G+++ + IH + G +++V+ L+D+Y+K G ++KARR+ +
Sbjct: 346 FTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEV 405
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+ KD+VSW+SMI GY + F KEAL+ F +MQ + P+ + +SACA + A+ G
Sbjct: 406 LEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQG 465
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
S + + + ++ + L+++YA+CGR +A +F ++ KD++ WN +VSG + +
Sbjct: 466 QQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQS 525
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G + A VF ++ + G++ N TFV + + + +G+Q ++ + T E
Sbjct: 526 GLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEV 584
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ L G+ G +++A M E N + W ++ C H
Sbjct: 585 ANALISLYGKCGSIEDAKMQFFEMS-ERNHVSWNTIITSCSQH 626
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 207/430 (48%), Gaps = 5/430 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ N + A+ Y+ M G +PT + VL AC + F+ G H+ + K G
Sbjct: 114 MLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQG 173
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V +L+ LY+ G L+ A +VF ++P + V++ +IS + GN E A+ +F
Sbjct: 174 SCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFE 233
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G PD +I +L AC +GDL+ K +H Y+ +AG + + SL+DLY KCG
Sbjct: 234 EMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCG 293
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +A +F ++V W+ M+ Y ++ D+F M ++P +T +L
Sbjct: 294 VIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLR 353
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C G + LG + F S+ + LIDMY+K G + +A ++ ++ KD V
Sbjct: 354 TCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVS 413
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++++G + + K A F ++ GI P+ + C + +G+Q +S
Sbjct: 414 WTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQ-IHSRV 472
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V + + + +V+L R G+ EA L +++ + I W +++G ++ L
Sbjct: 473 YVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIE-HKDKITWNGMVSG---FAQSGLY 528
Query: 421 EHVLNQLIAL 430
E L I +
Sbjct: 529 EEALEVFIKM 538
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 201/387 (51%), Gaps = 6/387 (1%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ + GL D L++LY G + A +VF+ + ++ VSW A++SGY G
Sbjct: 65 HAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLG 124
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
EEA+ ++ ++ G+ P + + VL+ACT+ + +H V + G V +L
Sbjct: 125 EEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNAL 184
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ LY + G++ A RVF +MP D V+++++I +A G + AL++F M+ P+
Sbjct: 185 IALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDC 244
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
T+ +L+ACAS+G L G S++ + + ++ +L+D+Y KCG + +A ++F+
Sbjct: 245 VTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKS 304
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
+ V+WN ++ + +F +F Q+ G++PN T+ LL CT+AG ++ G
Sbjct: 305 GDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLG 364
Query: 353 RQF-FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
Q S+ F + G ++D+ + G LD+A +++ + + + + W +++AG
Sbjct: 365 EQIHLLSIKTGFESDMYVS--GVLIDMYSKYGWLDKARRILEVLEAK-DVVSWTSMIAGY 421
Query: 412 RLHK--KTDLAEHVLNQLIALEPWNSG 436
H+ K L QL + P N G
Sbjct: 422 VQHEFCKEALETFKDMQLFGIWPDNIG 448
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 172/318 (54%), Gaps = 2/318 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V ++ + A+E + M+ G P N + ACA + G + HS + +G
Sbjct: 417 MIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSG 476
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + +L+NLY CG +A +F+ I K+ ++W ++SG+ G EEA+ +F
Sbjct: 477 YSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFI 536
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+K + F+ V ++A L D+ K IH V + G VA +L+ LY KCG
Sbjct: 537 KMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCG 596
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A+ F +M E++ VSW+++I + +G+ EALD+F M++E LKP T +GVL+
Sbjct: 597 SIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLA 656
Query: 241 ACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ +G +E G+ + S + P ++D+ + G++ +A K EM +
Sbjct: 657 ACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANA 716
Query: 299 VVWNAVVSGLSMNGYVKV 316
+VW ++S ++ +++
Sbjct: 717 MVWRTLLSACRVHKNIEI 734
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 155/313 (49%), Gaps = 15/313 (4%)
Query: 103 ISGYINEGNLEEAINMFRRLLH--RGLKPDSFSIVRVLTACTQLGDLSTAKW-----IHG 155
++G++ + E+ +++F + RGL F+ L C S W IH
Sbjct: 13 LTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACA--LRECRG----SVKHWPLVPVIHA 66
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
G G + L+DLYAK G +++ARRVF+Q+ +D VSW +M+ GYA NG +E
Sbjct: 67 KAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEE 126
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
A+ +++ M + P Y + VLSAC E G + + + S V+G LI
Sbjct: 127 AVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIA 186
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y + G ++ A +VF EM D+V +N ++S + G + A +F ++ G P+ T
Sbjct: 187 LYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVT 246
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
LL C G +++G+Q + + + ++P G ++DL + G + EA E+ KS
Sbjct: 247 IASLLAACASIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSG 305
Query: 396 PMEPNAIVWGALL 408
N ++W +L
Sbjct: 306 D-RTNVVLWNLML 317
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/580 (40%), Positives = 340/580 (58%), Gaps = 45/580 (7%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVK--AGLDCDEFVKTSLLNLYVHCGYLADA 84
L NF PF L+ + H+ I+K A L + L+ + + A
Sbjct: 34 LLRNFNSPFELR------------QVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQ 81
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+ + W + + + +AI +F RL + PD+F+ VL AC L
Sbjct: 82 IFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNL 141
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV------ 198
DLS + +HG V + G N+++ +V LYA CG M +AR +F++MP++D+V
Sbjct: 142 LDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMI 201
Query: 199 -------------------------SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
SW+SMI GY G KEA+ +F M+ +K
Sbjct: 202 AQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEV 261
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T+V VL+ACA LGAL+LG+ + R+ F N + TLIDMY KCG + +ACKVF EM
Sbjct: 262 TVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEM 321
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
+++ V W+A++ GL+M+G + A +F + + GI+PNG TF+GLL C+H GL+ EGR
Sbjct: 322 EERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGR 381
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+FF SM+R + + P IEHYGCMVDLL R+G L EAHE I +MPM+PN +VWGALL CR+
Sbjct: 382 RFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRV 441
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
HK ++AE + L+ L+P N G YV+LSNIY+ + +W D A++R M D+ ++K G S
Sbjct: 442 HKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWS 501
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
+ VDGVVHEF+ G+ SHP +E+I+ + +EL +++ G+VP T VL DIEE EK F+
Sbjct: 502 SITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFV 561
Query: 534 ACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKL 573
+ HSEKLAL FGL+ T + IRI KNLR+C DCH A ++
Sbjct: 562 SRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFQI 601
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 179/349 (51%), Gaps = 33/349 (9%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
++ D AI + +R P FT VL+AC D G H ++ K G
Sbjct: 100 LKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGF 159
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV------------------------ 97
+ +++ +++LY CG + +A +F+ +P ++VV
Sbjct: 160 RSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSR 219
Query: 98 -------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
SWT++I+GY+ G +EAI++F ++ G+K + ++V VL AC LG L
Sbjct: 220 MPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLG 279
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
IH Y N G RNV ++ +L+D+Y KCG +E+A +VF++M E+ +VSWS+MI G A +
Sbjct: 280 MRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMH 339
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G +EAL +F +M + ++P T +G+L AC+ +G + G + M R+ + +
Sbjct: 340 GRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEH 399
Query: 271 T-TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
++D+ ++ G + +A + M K + VVW A++ ++ V++A
Sbjct: 400 YGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 448
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 141/314 (44%), Gaps = 35/314 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V + AI + M G T VL ACA LG+R H + G
Sbjct: 231 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 290
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + +L+++YV CG L +A KVF+++ ++ VVSW+A+I G G EEA+ +F
Sbjct: 291 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 350
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++P+ + + +L AC+ +G +S +GR F + +
Sbjct: 351 DMSQVGIEPNGVTFIGLLHACSHMGLIS-------------EGRRFFASMT--------- 388
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
R + +P+ I + M+ + G EA + NM +KP +L
Sbjct: 389 ------RDYGIIPQ--IEHYGCMVDLLSRAGLLHEAHEFILNMP---MKPNGVVWGALLG 437
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC +E+ A + + L++ L ++YA+ GR +V + MKD+ QV
Sbjct: 438 ACRVHKNVEMAEEAIKHLLELDPLNDGYY-VVLSNIYAEAGRWEDTARVRKFMKDR-QVK 495
Query: 301 WNAVVSGLSMNGYV 314
S ++++G V
Sbjct: 496 KTPGWSSITVDGVV 509
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/574 (39%), Positives = 348/574 (60%), Gaps = 2/574 (0%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +L C + + G R H+ ++K +++T L+ LY C L DA ++FD++P
Sbjct: 93 YDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP 152
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
KNVVSWTA+IS Y G EA+N+F +L +P+ F+ +LT+C T +
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 212
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IH + ++FV +SL+D+YAK G + A VF +PE+D+V+ +++I GYA G
Sbjct: 213 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGL 272
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+EAL +F +Q E + T VL+A + L AL G S + R+ S VL +
Sbjct: 273 DEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNS 332
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQP 331
LIDMY+KCG + A ++F M ++ + WNA++ G S +G + +F + E+ ++P
Sbjct: 333 LIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKP 392
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQ-FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
+ T++ +L GC+H L D G + F+N ++ + P I HYGC+VDLLGR+G+++EA +
Sbjct: 393 DSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFD 452
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
IK MP P A +WG+LL CR+H ++ V +L+ LEP N+GNYV+LSN+Y+++ K
Sbjct: 453 FIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGK 512
Query: 451 WNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKA 510
W D IR +M +K + K G SWVE+D +VH F D++HP E++ K+ EL+ K K
Sbjct: 513 WEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKE 572
Query: 511 AGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEA 570
G+VP VL+D++EE+K+ L HSEKLALAFGLI T IR+ KNLR+C DCH
Sbjct: 573 DGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSF 632
Query: 571 IKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K +S++ R +I+RD NRFH + G CSC D+W
Sbjct: 633 AKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 184/341 (53%), Gaps = 4/341 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + A+ + M P +FTF +L +C F+ G + HS+ +K
Sbjct: 162 MISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRN 221
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +SLL++Y G + DA VF +P+++VV+ TAIISGY G EEA+ +FR
Sbjct: 222 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 281
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G+ +S + VLTA + L L+ K +H +V +G+ V + SL+D+Y+KCG
Sbjct: 282 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 341
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVL 239
N+ ARR+FD MPE+ +SW++M+ GY+ +G +E L++F M+ EN +KP+ T + VL
Sbjct: 342 NVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVL 401
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DK 296
S C+ ++G+ M + P +G ++D+ + GR+ +A ++M
Sbjct: 402 SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVP 461
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
+W +++ ++ V++ V +L + + GN +
Sbjct: 462 TAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVI 502
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/611 (38%), Positives = 359/611 (58%), Gaps = 14/611 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI +V C A+E + M +GF P +T ++ ACA + LG + HSL+++ G
Sbjct: 220 MITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLG 279
Query: 61 LDCDEFVKTSLLNLYVHCGY---LADALKVFDDIPDKNVVSWTAIISGYINEGNLEE-AI 116
L D V L+++Y + A KVF +P NV+SWTA+ISGY+ G E A+
Sbjct: 280 LVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAV 339
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+ +L+ ++P+ + +L AC L D + + IH V + G V +LV +Y
Sbjct: 340 ELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMY 399
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMI--QGYASNGFPKEALDMFYNMQRENLKPEYYT 234
A+ G ME+AR+ FDQ+ E++++S SS I G ++ + + M ++ +T
Sbjct: 400 AESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESM-------DVGVSTFT 452
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+LSA A++G G + + F S+ + +L+ MY++CG + AC+ F EM+
Sbjct: 453 FASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEME 512
Query: 295 DKDQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
D V+ W +++S L+ +G+ + A +F + G++PN T++ +L C+H GLV EG+
Sbjct: 513 DDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGK 572
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
++F SM + L P +EHY CMVDLL RSG + EA E I MP + +A+VW LL CR
Sbjct: 573 EYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRT 632
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
++ ++ E +I LEP + YVLLSN+Y+ W++ A+IRS+M + + K G S
Sbjct: 633 YENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLS 692
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
W+ V +HEF GD SHP +++IY+KL L ++K G+VP T VL D+ ++ K+ L
Sbjct: 693 WMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCL 752
Query: 534 ACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF 593
HSEK+A+AFGLITT P IRI KNLRVC DCH AIK ISK TGREII+RD+NRFH
Sbjct: 753 LQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRM 812
Query: 594 IEGSCSCKDFW 604
+G CSC ++W
Sbjct: 813 KDGKCSCGEYW 823
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 176/351 (50%), Gaps = 18/351 (5%)
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-KNVVSWTAIISGYINEGNLEEAINMF 119
LD D V SLL +Y CG++ A +VFD + +++VSWTA+ G +EA+ +
Sbjct: 75 LDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLL 134
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDL--STAKWIHGYVNEAGK-GRNVFVATSLVDLY 176
+L GL+P++F++ AC G+L S+ + G+ + G G +V V +L+D++
Sbjct: 135 GEMLESGLRPNAFTLCAAAHACFP-GELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMF 193
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ G++ AR+VF+ + E+ +V W+ MI Y G +A+++F M + +P+ YTM
Sbjct: 194 ARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMS 253
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC---GRMAQACKVFREM 293
++SACA G+ LG S + R +S+ + L+DMY K M A KVF+ M
Sbjct: 254 SMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRM 313
Query: 294 KDKDQVVWNAVVSG-LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
+ + W A++SG + G A + ++ I+PN T+ LL C + D G
Sbjct: 314 PTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSG 373
Query: 353 RQFFNSMSRVF---------SLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
RQ + + +L M GCM + QL E + L S
Sbjct: 374 RQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTS 424
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/554 (42%), Positives = 353/554 (63%), Gaps = 2/554 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNL-YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGN 111
H+ I+ GL + T LL+ Y ++ ++F IP + + ++I+
Sbjct: 39 HARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITLTSKFSF 98
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+E++ +RR+L + +++ V+ + L S + IH +V G G + +V +
Sbjct: 99 PQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAA 158
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
LV YAK G++ AR+VFD+MPEK +V+W+SMI GY NGF KEA+++F+ MQ +KP+
Sbjct: 159 LVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPD 218
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
T V +LSACA +GA+ LG W ++ RN F N VLGT L++MY++CG +++A +VF
Sbjct: 219 SSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFD 278
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
M++K+ V W A++SG M+G+ A +F ++ G +PN TFV +L C HAGLVDE
Sbjct: 279 SMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDE 338
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK-SMPMEPNAIVWGALLAG 410
GRQ F +M + + L P +EH CMVD+LGR+G L+EA++ IK + P EP VW A+L
Sbjct: 339 GRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGA 398
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
C++HK DL V L+++EP N G+YV+LSNIY+ + + + KIR++M ++K
Sbjct: 399 CKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEV 458
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
G S ++VD V+ F +GD SHP + +IY LDEL ++ + AG++P ++ V+ ++EEEE++
Sbjct: 459 GYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAGYIPASESVMHEVEEEERE 518
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
Y L HSEKLA+AFGL+ T IRI KNLR+C DCH AIK IS I REI VRD RF
Sbjct: 519 YALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKYISIIANREINVRDRLRF 578
Query: 591 HCFIEGSCSCKDFW 604
H F +GSCSC+D+W
Sbjct: 579 HHFKDGSCSCQDYW 592
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 186/354 (52%), Gaps = 6/354 (1%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
Q ++ Y M +N+TF V+K+ A F +G H + G D +V+ +L
Sbjct: 100 QESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAAL 159
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
++ Y G++ A KVFD +P+K VV+W ++ISGY G +EA+ +F + G+KPDS
Sbjct: 160 VSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDS 219
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+ V +L+AC Q+G + W+H Y+ NV + T+L+++Y++CGN+ KAR VFD
Sbjct: 220 STFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDS 279
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M EK+IV+W++MI GY +G +A+++F M + +P T V VLSACA G ++ G
Sbjct: 280 MEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEG 339
Query: 252 VWASSFMERNEFLSNPVLGTT-LIDMYAKCGRMAQACKVFREMKDKD--QVVWNAVVSGL 308
+ M++ L V ++DM + G + +A + + K+ VW A++
Sbjct: 340 RQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGAC 399
Query: 309 SMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
M+ + V L I+P N +V L AG +D + N M R
Sbjct: 400 KMHKNFDLGVEVAEHL--LSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIR 451
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 128/249 (51%), Gaps = 8/249 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N + A+E + M++ G P + TF +L ACA+ LG H I +
Sbjct: 190 MISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNC 249
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + + T+L+N+Y CG ++ A +VFD + +KN+V+WTA+ISGY G+ +AI +F
Sbjct: 250 FDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFN 309
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV-NEAGKGRNVFVATSLVDLYAKC 179
+ G +P++ + V VL+AC G + + I + E G +V +VD+ +
Sbjct: 310 EMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRA 369
Query: 180 GNMEKARRVFDQMPEKDIVS--WSSMI---QGYASNGFPKEALDMFYNMQRENLKPEYYT 234
G++ +A + K+ W++M+ + + + E + +++ EN P +Y
Sbjct: 370 GHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPEN--PGHYV 427
Query: 235 MVGVLSACA 243
M+ + A A
Sbjct: 428 MLSNIYALA 436
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/592 (39%), Positives = 359/592 (60%), Gaps = 25/592 (4%)
Query: 19 NSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE----------FVK 68
+S+++ G + T+ ++K C SH + + L C F+
Sbjct: 2 DSLQSHGLWADSATYSELIKCCL----------SHRAVHEGNLICRHLYFNGHQPMMFLV 51
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
L+N+YV L DA ++FD +P +NV+SWT +IS Y ++A+ + +L G++
Sbjct: 52 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVR 111
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
P+ ++ VL AC + D+ + +H + + G +V+V ++L+D++AK G E A V
Sbjct: 112 PNVYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSV 168
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD+M D + W+S+I G+A N AL++F M+R E T+ VL AC L L
Sbjct: 169 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 228
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
ELG+ A + + + + +L L+DMY KCG + A +VF +MK++D + W+ ++SGL
Sbjct: 229 ELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGL 286
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+ NGY + A +F ++ G +PN T VG+L C+HAGL+++G +F SM +++ + P
Sbjct: 287 AQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPG 346
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
EHYGCM+DLLG++G+LD+A +L+ M EP+A+ W LL CR+ + LAE+ ++I
Sbjct: 347 REHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVI 406
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
AL+P ++G Y +LSNIY+ S KW+ +IR M D GI+K GCSW+EV+ +H F++GD
Sbjct: 407 ALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGD 466
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
SHP ++ KL++L +L G+VP T+ VL D+E E+ + L HSEKLALAFGL+T
Sbjct: 467 ESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMT 526
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
+ VIRI KNLR+CGDCH KL SK+ R I++RD R+H F +G CSC
Sbjct: 527 LPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSC 578
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 169/310 (54%), Gaps = 9/310 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + Q A+E M +G P +T+ VL+AC D ++ H I+K G
Sbjct: 85 MISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDVRM---LHCGIIKEG 141
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D +V+++L++++ G DAL VFD++ + + W +II G+ + A+ +F+
Sbjct: 142 LESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 201
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G + ++ VL ACT L L + +V+ +++ + +LVD+Y KCG
Sbjct: 202 RMKRAGFIAEQATLTSVLRACTGLALLELG--MQAHVHIVKYDQDLILNNALVDMYCKCG 259
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E ARRVF+QM E+D+++WS+MI G A NG+ +EAL +F M+ KP Y T+VGVL
Sbjct: 260 SLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLF 319
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G LE G W + + NP +ID+ K G++ A K+ EM+ + D
Sbjct: 320 ACSHAGLLEDG-WYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 378
Query: 298 QVVWNAVVSG 307
V W ++
Sbjct: 379 AVTWRTLLGA 388
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/552 (42%), Positives = 334/552 (60%), Gaps = 33/552 (5%)
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG--LKPDSFSIVRVLTACTQ 143
+V D+ + + ++ ++I + + + + R+LH L PD+++ ++ Q
Sbjct: 64 QVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQ 123
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK------------------- 184
L T +HG + G + V + L+ +YA+ G ++
Sbjct: 124 LLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAM 183
Query: 185 ------------ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
AR++FD+M KD ++W++MI GY G +EAL +F MQRE +K
Sbjct: 184 VSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNE 243
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+MV VLSAC+ LGAL+ G WA +++ERN+ LGT LIDMYAKCG M +A +VF
Sbjct: 244 VSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWG 303
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
MK+K+ W++ + GL+MNG + +F +++ +QPN TFV +L GC+ GLV+EG
Sbjct: 304 MKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEG 363
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
R+ F SMS+V+ + P +EHYGCMVDL GR+G LDEA I SMP+ P+ WGALL C+
Sbjct: 364 RKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACK 423
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
+++ ++ E +++ LE N G YVLLSNIY+ S W+ + +R M KG++K GC
Sbjct: 424 IYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGC 483
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF 532
S +EV G VHEF VGD SHP +I L E++ +LK +G+V T+ V FDIEEEEK+
Sbjct: 484 SVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDA 543
Query: 533 LACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
L HSEK+A+AFGLI+ +P IRI KNLRVC DCH+A K+ISK REI+VRD NRFH
Sbjct: 544 LCMHSEKIAIAFGLISLSPDVPIRIVKNLRVCWDCHDATKMISKAFNREIVVRDRNRFHH 603
Query: 593 FIEGSCSCKDFW 604
F +G CSCK +W
Sbjct: 604 FRDGECSCKGYW 615
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 170/350 (48%), Gaps = 51/350 (14%)
Query: 1 MIRGFVSNDCFQHAIEFYNS-MRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MIR + + FY+ + + G+L P N+TF F+++ A+ G H VK
Sbjct: 80 MIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSVHGAAVK 139
Query: 59 AGLDCDEFVKTSLLNLYVH----------------------------CGYLAD---ALKV 87
G + D V++ L+ +Y C + D A K+
Sbjct: 140 YGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKL 199
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD + K+ ++W A+ISGY+ G EA+++F + G+K + S+V VL+AC+ LG L
Sbjct: 200 FDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGAL 259
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+W H Y+ + + T+L+D+YAKCGNM KA VF M EK++ +WSS I G
Sbjct: 260 DQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGL 319
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS-N 266
A NG ++ L++F M++++++P T V VL C+ +G +E G R F S +
Sbjct: 320 AMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEG--------RKHFESMS 371
Query: 267 PVLGTT--------LIDMYAKCGRMAQACKVFREMKDKDQV-VWNAVVSG 307
V G ++D+Y + G + +A M + V W A+++
Sbjct: 372 KVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNA 421
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 135/317 (42%), Gaps = 39/317 (12%)
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
+K + S+V T +L + T I+G +N+ + FVA+ ++ N+ +
Sbjct: 8 VKHPTISMVEPCTTLRELKQIHTQLLINGLLNDP-QLVGQFVASIALN---NPNNLHYSN 63
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN--LKPEYYTMVGVLSACAS 244
+V D + +++SMI+ ++ + P + + + L P+ YT ++ A
Sbjct: 64 QVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQ 123
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG---------------------RM 283
L A G + F +P + + LI MYA+ G M
Sbjct: 124 LLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAM 183
Query: 284 AQAC----------KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
AC K+F +M KD + WNA++SG G + A +F +++ G++ N
Sbjct: 184 VSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNE 243
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
+ V +L C+H G +D+GR + R L + ++D+ + G +++A E+
Sbjct: 244 VSMVSVLSACSHLGALDQGRWAHAYIER-NKLRMTLTLGTALIDMYAKCGNMNKAMEVFW 302
Query: 394 SMPMEPNAIVWGALLAG 410
M E N W + + G
Sbjct: 303 GMK-EKNVYTWSSAIGG 318
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/670 (37%), Positives = 373/670 (55%), Gaps = 66/670 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + AI M EG PT FT VL + A + G + HS IVK G
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG 176
Query: 61 LDCDEFVKTSLLNLYVHCG------YLAD-------------------------ALKVFD 89
L + V SLLN+Y CG ++ D A+ F+
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFE 236
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL-KPDSFSIVRVLTACTQLGDLS 148
+ ++++V+W ++ISG+ G A+++F ++L L PD F++ VL+AC L L
Sbjct: 237 QMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLC 296
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ----------------- 191
K IH ++ G + V +L+ +Y++CG +E ARR+ +Q
Sbjct: 297 IGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG 356
Query: 192 ----------------MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
+ ++D+V+W++MI GY +G EA+++F +M +P YT+
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK- 294
+LS +SL +L G ++ + + + LI MYAK G + A + F ++
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
++D V W +++ L+ +G+ + A +F + G++P+ T+VG+ CTHAGLV++GRQ
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+F+ M V + P + HY CMVDL GR+G L EA E I+ MP+EP+ + WG+LL+ CR+H
Sbjct: 537 YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K DL + +L+ LEP NSG Y L+N+YSA KW +AAKIR M D ++K +G SW
Sbjct: 597 KNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSW 656
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+EV VH F V D +HP +IY + ++ ++K G+VP T VL D+EEE K+ L
Sbjct: 657 IEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILR 716
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFGLI+T K +RI KNLRVC DCH AIK ISK+ GREIIVRD RFH F
Sbjct: 717 HHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFK 776
Query: 595 EGSCSCKDFW 604
+G CSC+D+W
Sbjct: 777 DGFCSCRDYW 786
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 201/489 (41%), Gaps = 130/489 (26%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDD---------------------- 90
H ++K+GL ++ +L+N+Y GY A K+FD+
Sbjct: 37 HCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM 96
Query: 91 ---------IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
+P ++ VSWT +I GY N G +AI + ++ G++P F++ VL +
Sbjct: 97 DSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASV 156
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD----------- 190
+ T K +H ++ + G NV V+ SL+++YAKCG+ A+ VFD
Sbjct: 157 AATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWN 216
Query: 191 --------------------QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LK 229
QM E+DIV+W+SMI G+ G+ ALD+F M R++ L
Sbjct: 217 AMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLS 276
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC--------- 280
P+ +T+ VLSACA+L L +G S + F + ++ LI MY++C
Sbjct: 277 PDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336
Query: 281 ------------------------GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
G M QA +F +KD+D V W A++ G +G
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGE 396
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF--------------------- 355
A +F + G +PN T +L + + G+Q
Sbjct: 397 AINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALIT 456
Query: 356 -------FNSMSRVFSLTPM---IEHYGCMVDLLGRSGQLDEAHELIKSMPME---PNAI 402
S SR F L + M+ L + G +EA EL ++M ME P+ I
Sbjct: 457 MYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Query: 403 VWGALLAGC 411
+ + + C
Sbjct: 517 TYVGVFSAC 525
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/521 (41%), Positives = 327/521 (62%), Gaps = 3/521 (0%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MIRG + + A+EFY+ M+ G P N T+PF+ AC+ + G H +++
Sbjct: 97 MIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRR 156
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD D V SL+ +Y CG + DA KVFD+I K++VSW ++ISGY + EA+ +F
Sbjct: 157 GLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLF 216
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R ++ G +P+ S+V VL AC +LGDL W+ +V E N F+ ++L+ +Y KC
Sbjct: 217 REMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKC 276
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ ARR+FD M +KD V+W++MI GYA NG +EA+ +F +M+ + P+ T++G+L
Sbjct: 277 GDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGIL 336
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACAS+GAL+LG + F + +GT L+DMYAKCG + A +VF M +K++V
Sbjct: 337 SACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEV 396
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCG--IQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
WNA++S L+ +G + A +F + G + PN TFVG+L C HAGLVDEGR+ F+
Sbjct: 397 SWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFH 456
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
MS F L P IEHY CMVDL R+G L+EA + + +MP +P+ ++ GALL C+ K
Sbjct: 457 MMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNI 516
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
D++E V+ L+ LEP NSGNYV+ S +Y+ +W+D+A++R +M KG+ K GCSW+++
Sbjct: 517 DISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDI 576
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTD 518
+ +HEF GD H +I+ LD L L+ G++P +
Sbjct: 577 NSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIPNAN 617
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/599 (39%), Positives = 353/599 (58%), Gaps = 10/599 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ + MR G + FTF V+ AC L + HSL +G D VK SLL
Sbjct: 124 ALSLFGEMREMGLVMDGFTFSGVITACCNH--VGLIRQLHSLAFSSGFDSYVSVKNSLLT 181
Query: 74 LYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
Y G L +A VF+ + + ++ VSW ++I Y +A+ ++R ++HRG + D
Sbjct: 182 YYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDM 241
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG-NMEKARRVFD 190
F++ VLT + + DLS H + G +N V + L+D+YAKCG M ++R+VF+
Sbjct: 242 FTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFE 301
Query: 191 QMPEKDIVSWSSMIQGYASNG-FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
++ D+V W++MI GY+ N EAL+ F MQR P+ + V +SAC++L +
Sbjct: 302 EICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPS 361
Query: 250 LGVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
G + ++E SN + + L+ MY+KCG + A K+F+ M + V N++++G
Sbjct: 362 QGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGY 421
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+ +G + +F Q+ I P T V +L C H G V+EG+++FN M +F + P
Sbjct: 422 AQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPE 481
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
EHY CM+DLLGR+G+L EA LI +MP P + W ALL CR + +LAE NQ +
Sbjct: 482 AEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFL 541
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
LEP N+ Y++L+++YSA+ KW +AA+IR +M D+GI+K GCSW+E++ VH F+ D
Sbjct: 542 QLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAED 601
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLF---DIEEEEKQYFLACHSEKLALAFG 545
NSHP ++I+ LDE+ K+K AG+VP + E+EK+ LA HSEKLA+AFG
Sbjct: 602 NSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFG 661
Query: 546 LITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
L+ T + + + KNLR+CGDCH AIK +S I R+I VRD RFHCF +G CSC D+W
Sbjct: 662 LLFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 201/433 (46%), Gaps = 38/433 (8%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
+F +LK+C D G H++ +K+ + ++ + LY C L A F+
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 92 PDKNVVSWTAIISGYINE-------------------------------GNLEEAINMFR 120
+ NV S+ A+I+ Y E G+ A+++F
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GL D F+ V+TAC + + +H +G V V SL+ Y+K G
Sbjct: 130 EMREMGLVMDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNG 187
Query: 181 NMEKARRVFDQMPE--KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
+E+A VF+ M E +D VSW+SMI Y + +AL ++ +M + + +T+ V
Sbjct: 188 ILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASV 247
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR-MAQACKVFREMKDKD 297
L+ + + L G+ + + F N +G+ LIDMYAKCG M+++ KVF E+ D
Sbjct: 248 LTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSD 307
Query: 298 QVVWNAVVSGLSMNGYVKV-AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
VVWN ++SG S N + V A F Q+++ G P+ +FV + C++ +G+QF
Sbjct: 308 LVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFH 367
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+ + I +V + + G L +A +L + MP + N + +++AG H
Sbjct: 368 ALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP-QHNTVTLNSIIAGYAQHGI 426
Query: 417 TDLAEHVLNQLIA 429
+ ++ Q++A
Sbjct: 427 GTESLNLFEQMLA 439
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/619 (39%), Positives = 369/619 (59%), Gaps = 31/619 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+R + + Y M+ G P F +P ++K+ G+ H+ ++K G
Sbjct: 1 MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTG-----GIGFHAHVLKLG 55
Query: 61 LDCDEFVKTSLLNLYVH---------CGYL-----ADALKVFDDIPDKNVVSWTAIISGY 106
D FV+ +++++Y GY A +FD +P++NV++WTA+++GY
Sbjct: 56 HGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGY 115
Query: 107 INEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNV 166
+LE A F + R + S +L+ Q G A + + G RN
Sbjct: 116 AKVKDLEAARRYFDCMPERSV----VSWNAMLSGYAQNGLAEEA--LRLFDEMLGAYRNS 169
Query: 167 FVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QR 225
+++ Y + G+++ AR++F+ MP +++V+W+SMI GYA NG A+++F M
Sbjct: 170 VTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITA 229
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
+ L P+ TMV V+SAC LGALELG W F+ N+ + +I MY++CG M
Sbjct: 230 KKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMED 289
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
A +VF+EM +D V +N ++SG + +G+ A + +++ GI+P+ TF+G+L C+H
Sbjct: 290 AKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSH 349
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
AGL++EGR+ F S+ P I+HY CMVDLLGR G+L++A ++ MPMEP+A V+G
Sbjct: 350 AGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYG 404
Query: 406 ALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKG 465
+LL R+HK+ +L E N+L LEP NSGN++LLSNIY+++ +W D +IR M G
Sbjct: 405 SLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGG 464
Query: 466 IQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIE 525
++K G SWVE G +H+F+V D SH S+ IY L EL K++ AG++ VL D+E
Sbjct: 465 VKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVE 524
Query: 526 EEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVR 585
EEEK+ + HSEKLA+ + L+ + VIR+ KNLRVC DCH AIK+ISK+ GR IIVR
Sbjct: 525 EEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVR 584
Query: 586 DNNRFHCFIEGSCSCKDFW 604
DNNRFHCF +G CSCKD+W
Sbjct: 585 DNNRFHCFNDGLCSCKDYW 603
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/523 (42%), Positives = 345/523 (65%), Gaps = 3/523 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISG-YINEGNLEEAINMFRRLLHRGL-KPDSFSIVRVLTAC 141
A K+F I N+ SW ++I G ++ +E + +FR+++ RG P++F++ VL AC
Sbjct: 43 ARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKAC 102
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+ + L + +H V ++G G + FV T+LV+ YAKC ++ A +VFD++ ++++V+WS
Sbjct: 103 SIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWS 162
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+MI GYA G EAL +F +MQ+ + P+ TMV V+SACA+ GAL+ G W +++ +
Sbjct: 163 TMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQ 222
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
++ L T L++MYAKCG + +A +VF M KD W++++ GL++NG + A F
Sbjct: 223 LIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEF 282
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++E+ ++PN TF+G+L C H+GLV EGR++++SM F + P +E YGCMVDLL R
Sbjct: 283 FRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE-FGIVPSMELYGCMVDLLCR 341
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+ +++A L+++MP+ PN ++W LL GC+ K D +E V +L+ LEP N+ NY+LL
Sbjct: 342 ASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILL 401
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
SN+Y++ +W +++R M GI+ + GCS +EVDG+VHEF++GD SHP + ++ L
Sbjct: 402 SNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREIL 461
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+++ ++ A G P VL ++ +EEK+ L HSE+LA+A+GL+ T IRI KNL
Sbjct: 462 RDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNL 521
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
RVCGDCHE K+IS REIIVRD RFH F+ GSCSC+DFW
Sbjct: 522 RVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVNGSCSCRDFW 564
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 115/311 (36%), Positives = 181/311 (58%), Gaps = 5/311 (1%)
Query: 1 MIRGFV-SNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MIRG S + + + M G+ P FT FVLKAC+ + G + H+ ++K
Sbjct: 61 MIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLK 120
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+G FV+T+L+N Y C + A KVFD+I D+N+V+W+ +ISGY G + EA+ +
Sbjct: 121 SGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGL 180
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
FR + G+ PD ++V V++AC G L T KW+H Y+N+ ++ ++T+LV++YAK
Sbjct: 181 FRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAK 240
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG +E+A+ VFD MP KD +WSSMI G A NG ++AL+ F+ M+ +KP + T +GV
Sbjct: 241 CGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGV 300
Query: 239 LSACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DK 296
LSACA G + G + SS +E S + G ++D+ + + AC + M
Sbjct: 301 LSACAHSGLVSEGRRYWSSMLEFGIVPSMELYG-CMVDLLCRASLVEDACTLVETMPISP 359
Query: 297 DQVVWNAVVSG 307
+ V+W ++ G
Sbjct: 360 NPVIWRTLLVG 370
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 147/271 (54%), Gaps = 8/271 (2%)
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP-KEALDMFYNMQRENL-KPEYYTMVG 237
G+++ AR++F Q+ +I SW+SMI+G + + P KE + +F M R P +TM
Sbjct: 38 GDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAF 97
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
VL AC+ + ALE G + + ++ F S+P + T L++ YAKC + A KVF E+ D++
Sbjct: 98 VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN 157
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V W+ ++SG + G V A G+F ++K G+ P+ T V ++ C +G +D G+
Sbjct: 158 LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHA 217
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
+++ T + E +V++ + G ++ A E+ +MP++ + W +++ G ++
Sbjct: 218 YINKQLIETDL-ELSTALVNMYAKCGCIERAKEVFDAMPVK-DTKAWSSMIVGLAIN--- 272
Query: 418 DLAEHVLNQLIALEPWN-SGNYVLLSNIYSA 447
LAE L + +E N+V + SA
Sbjct: 273 GLAEDALEEFFRMEEAKVKPNHVTFIGVLSA 303
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/554 (40%), Positives = 347/554 (62%), Gaps = 19/554 (3%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
H ++K GL DE + LL + G LA A VFD I N W +I GY N
Sbjct: 38 HGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSK 97
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
EEA+ ++ +L+ + ++++ +L AC+ + L + IH ++ + G G ++
Sbjct: 98 EPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTN 157
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
SL+++Y+K G+++ AR +FDQ+ ++D EAL++F+ MQ +K
Sbjct: 158 SLLNVYSKSGDIKSARLLFDQVDQRDT-----------------EALNLFHRMQTAGIKL 200
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ +V L ACA LG L+ G W ++++++E +P+LG LIDMYAKCG + +A +VF
Sbjct: 201 DNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVF 260
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
R+M++K VW A++SG +++G + A F +++ G++PN TF G+L C+HAGLV
Sbjct: 261 RKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVH 320
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
E + F SM R+ P IEHYGCMVDLLGR+G L EA ELI++MP++PNA +WGALL
Sbjct: 321 EAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 380
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
C +H +L + + LI ++P + G Y+ L++I++A+ +WN AA++R M ++G+ K+
Sbjct: 381 CHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLP 440
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
GCS + V+G HEFL GD SHP ++I L+++ +L+ G+ P +L D+E++EK+
Sbjct: 441 GCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKE 500
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
+ HSEKLA+ FGLI+T P IRI KNLRVC DCH IKLISK+ REI++RD RF
Sbjct: 501 TAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRF 560
Query: 591 HCFIEGSCSCKDFW 604
H F +G+C+C D+W
Sbjct: 561 HLFKDGNCTCGDYW 574
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 164/319 (51%), Gaps = 19/319 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+ ++ + A+ Y+ M +TFPF+LKAC+ + + H+ I+K G
Sbjct: 89 MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMG 148
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + SLLN+Y G + A +FD + ++ EA+N+F
Sbjct: 149 FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT-----------------EALNLFH 191
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+K D+ ++V L AC LG L KWIH Y+ + + + L+D+YAKCG
Sbjct: 192 RMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCG 251
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E+A VF +M EK + W++MI GYA +G +EAL+ F MQ ++P T G+L+
Sbjct: 252 DLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILT 311
Query: 241 ACASLGALELGVWASSFMER-NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQ 298
AC+ G + MER + F + ++D+ + G + +A ++ M K +
Sbjct: 312 ACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNA 371
Query: 299 VVWNAVVSGLSMNGYVKVA 317
+W A+++ ++G +++
Sbjct: 372 AIWGALLNACHIHGNLELG 390
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/609 (38%), Positives = 344/609 (56%), Gaps = 32/609 (5%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA--- 84
P+ + ++ AC R +LG R H+ + F+ LL++Y CG L DA
Sbjct: 85 PSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQML 144
Query: 85 ----------------------------LKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
K+FD++P ++ SW A ISGY+ EA+
Sbjct: 145 FDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREAL 204
Query: 117 NMFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+FR + H + F++ L A + L K IHGY+ + V ++L+DL
Sbjct: 205 ELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDL 264
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y KCG++++AR +FDQM ++D+VSW++MI +G +E +F ++ + ++P YT
Sbjct: 265 YGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTF 324
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
GVL+ACA A LG +M + + L+ MY+KCG A +VF EM
Sbjct: 325 AGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQ 384
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
D V W +++ G + NG A F L + G +P+ T+VG+L CTHAGLVD+G ++
Sbjct: 385 PDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEY 444
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F+S+ L +HY C++DLL RSG+ EA +I +MP++P+ +W +LL GCR+H
Sbjct: 445 FHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHG 504
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
+LA+ L +EP N Y+ L+NIY+ + W++ A +R M + GI K G SW+
Sbjct: 505 NLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWI 564
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
E+ VH FLVGD SHP + I+ L EL+ K+K G+VP T+ VL D+EEE+K+ L
Sbjct: 565 EIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVY 624
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+ FG+I+T P I++ KNLR C DCH AIK ISKI R+I VRD+NRFHCF +
Sbjct: 625 HSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFED 684
Query: 596 GSCSCKDFW 604
GSCSCKD+W
Sbjct: 685 GSCSCKDYW 693
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 194/354 (54%), Gaps = 6/354 (1%)
Query: 2 IRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
I G+V+++ + A+E + M R+E FT L A A +LG H +++
Sbjct: 191 ISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTE 250
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ DE V ++LL+LY CG L +A +FD + D++VVSWT +I +G EE +FR
Sbjct: 251 LNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFR 310
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L+ G++P+ ++ VL AC K +HGY+ AG F ++LV +Y+KCG
Sbjct: 311 DLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCG 370
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N ARRVF++M + D+VSW+S+I GYA NG P EAL F + + KP+ T VGVLS
Sbjct: 371 NTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLS 430
Query: 241 ACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQ 298
AC G ++ G+ + S E++ + +ID+ A+ GR +A + M K D+
Sbjct: 431 ACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDK 490
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDE 351
+W +++ G ++G +++A L + I+P N T++ L +AGL E
Sbjct: 491 FLWASLLGGCRIHGNLELAKRAAKALYE--IEPENPATYITLANIYANAGLWSE 542
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 164/353 (46%), Gaps = 37/353 (10%)
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
+ ++EA+ + R HR P + ++ AC + L + +H + + VF
Sbjct: 67 QQKRVKEAVELLHRTDHR---PSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVF 123
Query: 168 VATSLVDLYAKCGN-------------------------------MEKARRVFDQMPEKD 196
++ L+D+YAKCG+ +E+AR++FD+MP++D
Sbjct: 124 ISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRD 183
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWAS 255
SW++ I GY ++ P+EAL++F MQR E +T+ L+A A++ L LG
Sbjct: 184 NFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIH 243
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
++ R E + V+ + L+D+Y KCG + +A +F +MKD+D V W ++ +G +
Sbjct: 244 GYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRRE 303
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
F +F L + G++PN TF G+L C G++ M P +
Sbjct: 304 EGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHA-GYDPGSFAISAL 362
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
V + + G A + M +P+ + W +L+ G + + D A H L+
Sbjct: 363 VHMYSKCGNTRVARRVFNEM-HQPDLVSWTSLIVGYAQNGQPDEALHFFELLL 414
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/521 (41%), Positives = 326/521 (62%), Gaps = 3/521 (0%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MIRG + + A+EFY+ M+ G P N T+PF+ AC+ + G H +++
Sbjct: 97 MIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRR 156
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD D V SL+ +Y CG + DA KVFD+I K++VSW ++ISGY + EA+ +F
Sbjct: 157 GLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLF 216
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R ++ G +P+ S+V VL AC +LGDL W+ +V E N F+ ++L+ +Y KC
Sbjct: 217 REMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKC 276
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ ARR+FD M +KD V+W++MI GYA NG +EA+ +F +M+ + P+ T++G+L
Sbjct: 277 GDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGIL 336
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACAS+GAL+LG + F + +GT L+DMYAKCG + A +VF M K++V
Sbjct: 337 SACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEV 396
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCG--IQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
WNA++S L+ +G + A +F + G + PN TFVG+L C HAGLVDEGR+ F+
Sbjct: 397 SWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFH 456
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
MS F L P IEHY CMVDL R+G L+EA + + +MP +P+ ++ GALL C+ K
Sbjct: 457 MMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNI 516
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
D++E V+ L+ LEP NSGNYV+ S +Y+ +W+D+A++R +M KG+ K GCSW+++
Sbjct: 517 DISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDI 576
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTD 518
+ +HEF GD H +I+ LD L L+ G++P +
Sbjct: 577 NSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIPNAN 617
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/680 (36%), Positives = 369/680 (54%), Gaps = 76/680 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACARE-HDFQLGVRSHSLIVKA 59
MI G+ + AIE + +MR F P +FTF VL A +D + + H +VK
Sbjct: 118 MITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKF 177
Query: 60 GLDCDEFVKTSLLNLYVHCGY---------LADALKVFDDIPDKNVVSWTAIISGYINEG 110
G++ V +LL++YV C +A A K+FD++P +N WT +I+GY+ G
Sbjct: 178 GIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNG 237
Query: 111 NL-------------------------------EEAINMFRRLLHRGLKPDSFSIVRVLT 139
+L E+A+ +FR++ G++ D + V++
Sbjct: 238 DLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVIS 297
Query: 140 ACTQLGDLSTAKWIHGYV--NEAGKGRNVF--VATSLVDLYAK----------------- 178
AC G K +H Y+ NE R+ V +L+ LY K
Sbjct: 298 ACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVK 357
Query: 179 --------------CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
G ME+A+ F QMPEK++++W+ MI G A NGF ++AL +F M+
Sbjct: 358 DIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMK 417
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
+ +P Y G ++AC+ LGALE G + + S +G +I MYA+CG +
Sbjct: 418 LDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVE 477
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A +F M D V WN++++ L +G+ A ++ Q+ K GI P+ TF+ +L C+
Sbjct: 478 AARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACS 537
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
HAGLV+EG ++FNSM + + P +HY M+DL R+G+ +A +I SMP E A +W
Sbjct: 538 HAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIW 597
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
ALLAGCR H DL +L L P + G YVLLSN+Y++ +WND A+ R +M D+
Sbjct: 598 EALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDR 657
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
G++K CSW EV+ VH FLV D HP IY+ L++L ++K G++P T +VL D+
Sbjct: 658 GVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDM 717
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
E E K+Y L+ HSEKLA+AFGL+ +R+ KNLR+CGDCH AIK +SK+ GREI+V
Sbjct: 718 ESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVV 777
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD RFH F G CSC+++W
Sbjct: 778 RDGKRFHHFKNGECSCRNYW 797
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 197/458 (43%), Gaps = 106/458 (23%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRR 121
D +T+L+ Y G L A ++F++ P ++ V + A+I+GY + + AI +FR
Sbjct: 78 DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137
Query: 122 LLHRGLKPDSFSIVRVLTACTQL-GDLSTAKWIHGYVNEAG------------------- 161
+ +PD F+ VL+A T + D +HG V + G
Sbjct: 138 MRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCA 197
Query: 162 ---------------------KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
RN F+ T+L+ Y + G++ AR + D M E+ ++W
Sbjct: 198 SSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAW 257
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
++MI GY +G ++AL +F M+ ++ + T V+SACA G LG +++ +
Sbjct: 258 NAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILK 317
Query: 261 NEFLSNP------VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV---------- 304
NE NP +G TLI +Y K G++ A K+F EM KD + WN +
Sbjct: 318 NEL--NPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRM 375
Query: 305 ---------------------VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
+SGL+ NG+ + A +F Q++ G +PN F G + C
Sbjct: 376 EEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITAC 435
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYG---------CMVDLLGRSGQLDEAHELIKS 394
+ G ++ GRQ L I H G M+ + R G ++ A + +
Sbjct: 436 SVLGALENGRQ----------LHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLT 485
Query: 395 MPMEPNAIVWGALLAGCRLH----KKTDLAEHVLNQLI 428
MP + + W +++A H K +L E +L + I
Sbjct: 486 MPF-VDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGI 522
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 148/355 (41%), Gaps = 93/355 (26%)
Query: 141 CTQ-LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
C Q L S A+ +HG+V +G + L+D+Y K + AR++FD++P+ D+++
Sbjct: 22 CPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIA 81
Query: 200 WSSMIQGYASNG--------FPKEALDM----FYN---------------------MQRE 226
+++I Y++ G F + LDM FYN M+
Sbjct: 82 RTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWA 141
Query: 227 NLKPEYYTMVGVLSAC--------------------------ASLGALELGVWAS----- 255
N +P+ +T VLSA A L AL L V+
Sbjct: 142 NFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNAL-LSVYVKCASSP 200
Query: 256 ----------------SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+RNEF + TTLI Y + G + A ++ M ++ +
Sbjct: 201 LVSSSSLMASARKLFDEMPKRNEF-----IWTTLITGYVRNGDLTGAREILDTMTEQPGI 255
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG +G + A +F ++ G+Q + +T+ ++ C G G+Q +
Sbjct: 256 AWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYI 315
Query: 360 SRVFSLTP----MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ L P ++ ++ L + G++D A ++ MP++ + I W LL+G
Sbjct: 316 LKN-ELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVK-DIITWNTLLSG 368
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/607 (38%), Positives = 360/607 (59%), Gaps = 42/607 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRG +D Q ++ + MR F P + F+F F++KA A ++G++ H +
Sbjct: 76 LIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVH 135
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD FV T+L+++Y CG++ A KVFD++P+ N ++W A++
Sbjct: 136 GLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMV---------------- 179
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
TAC + GD+ + + + RN+ ++ Y K
Sbjct: 180 -------------------TACCRGGDMKGGRELFDLM----PVRNLMSWNVMLAGYTKA 216
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E AR +F +MP KD VSWS+MI G+A NG+ +EA F +QR+ ++P ++ GVL
Sbjct: 217 GELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVL 276
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF-REMKDKDQ 298
SACA GALE G F+E++ + L+D Y+KCG + A VF R M +++
Sbjct: 277 SACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNI 336
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W ++++ L+M+G+ + A G+F ++E+ GI+P+ F+ LL C+HAGLV++G ++F+
Sbjct: 337 VSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDK 396
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M ++++ P IEHYGCMVDL GR+GQL +A+E + MP+ AI+W LL C +H
Sbjct: 397 MKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVK 456
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
LAE V +L L+P NS ++VLLSN Y+ + KW DAA +R M ++ I K G S +EVD
Sbjct: 457 LAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVD 516
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKA-AGFVPTTDHVLFDIEEEEKQYFLACHS 537
+++ FL G + ++E+ Y KL E+ +L+ G+VP VL DIEEEEK+ ++ HS
Sbjct: 517 KIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHS 576
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EKLA+AFG+ IRI KNLR+C DCH +KLIS+I EI+VRD +RFH F +G
Sbjct: 577 EKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGY 636
Query: 598 CSCKDFW 604
CSC+D+W
Sbjct: 637 CSCRDYW 643
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 23/275 (8%)
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYA--KCGNMEKARRVFDQMPEKDIVSWSSMI 204
L+T K IH V + G + F+A L+ A +++ A R+F P D+ +++I
Sbjct: 18 LTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLI 77
Query: 205 QGYASNGFPKEALDMFYNMQRENLK-PEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
+G + P+++L F M+R + P+ ++ ++ A A+L ++ +G+ +
Sbjct: 78 RGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGL 137
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
++ +GTTLI MY +CG + A KVF EM + + + WNA+V+ G +K G
Sbjct: 138 DTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMK------GG 191
Query: 324 LEKCGIQPNGN--TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE--HYGCMVDLL 379
E + P N ++ +L G T AG ++ R+ F M PM + + M+
Sbjct: 192 RELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEM-------PMKDDVSWSTMIVGF 244
Query: 380 GRSGQLDEAHELIKSMP---MEPNAIVWGALLAGC 411
+G +EA + + M PN +L+ C
Sbjct: 245 AHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSAC 279
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/681 (35%), Positives = 370/681 (54%), Gaps = 78/681 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR--EHDFQLGVRSHSLIVK 58
MI G+ N A+E + +MR + F P +FTF VL A ++ Q G + H +VK
Sbjct: 118 MITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCG-QMHCAVVK 176
Query: 59 AGLDC-DEFVKTSLLNLYVH--------CGYLADALKVFDDIPDKNVVSWT--------- 100
G+ C V +LL++YV C + A K+FD++P ++ ++WT
Sbjct: 177 TGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRN 236
Query: 101 ----------------------AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
A+ISGY++ G +EA+ + R++ G++ D + ++
Sbjct: 237 DDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTII 296
Query: 139 TACTQLGDLSTAKWIHGYV--------------------------NEAGKGRNVFVATSL 172
+AC +G K +H Y+ N+ + R +F A +
Sbjct: 297 SACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPV 356
Query: 173 VDL---------YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
++ Y G ME+A+ F++MP K++++ + MI G A NGF E L +F M
Sbjct: 357 RNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQM 416
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
+ + +P + G L+AC+ LGALE G + + + S+ +G +I MYAKCG +
Sbjct: 417 RLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVV 476
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
A VF M D V WN++++ L +G+ A +F Q+ K G+ P+ TF+ +L C
Sbjct: 477 EAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTAC 536
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
+HAGLV++GR +FNSM + +TP +HY MVDL R+G A +I SMP +P A V
Sbjct: 537 SHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPV 596
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGD 463
W ALLAGCR+H DL QL L P N G YVLLSNIY+ +WND AK+R +M D
Sbjct: 597 WEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRD 656
Query: 464 KGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
+ ++K CSW+EV+ VH F+V D+ HP +Y L++L ++K G++P T VL D
Sbjct: 657 QAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHD 716
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
+E E+K++ L+ HSEKLA+ FG++ P +R+ KN+R+CGDCH A K +SK+ REII
Sbjct: 717 MEYEQKEHALSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREII 776
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
VRD RFH F G CSC+D+W
Sbjct: 777 VRDRKRFHHFKNGDCSCRDYW 797
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 191/443 (43%), Gaps = 80/443 (18%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRR 121
D +T+L+ Y G L ++F+ P ++ V + A+I+GY + G+ A+ +FR
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 122 LLHRGLKPDSFSIVRVLTACTQ-LGDLSTAKWIHGYVNEAGKG-RNVFVATSLVDLYAK- 178
+ +PD F+ VL+A +G+ +H V + G G + V +L+ +Y K
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197
Query: 179 -------CGNMEKARRVFDQMPEKDIVSWSSMIQGYASN--------------------- 210
C M AR++FD+MP++D ++W++MI GY N
Sbjct: 198 ASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257
Query: 211 ----------GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
G +EAL + M+ ++ + T ++SACA++G+ ++G +++ +
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILK 317
Query: 261 NEFLSNP----VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV------------ 304
NE N + LI +Y K ++ +A K+F M ++ + WNA+
Sbjct: 318 NELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEE 377
Query: 305 -------------------VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
+SGL+ NG+ +F Q+ G +P F G L C+
Sbjct: 378 AKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSV 437
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
G ++ GRQ + + + M+ + + G ++ A + +MP + + W
Sbjct: 438 LGALENGRQLHAQLVHL-GYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWN 495
Query: 406 ALLAGCRLHKKTDLAEHVLNQLI 428
+++A H A + +Q++
Sbjct: 496 SMIAALGQHGHGVKAIELFDQML 518
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 147/338 (43%), Gaps = 57/338 (16%)
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
++ G KP + R+L + ++ A+ + E + T+L+ Y GN
Sbjct: 39 MIASGFKPRGHFLNRLLEMYCKSSNVVYARQLF----EEIPNPDAIARTTLITAYCALGN 94
Query: 182 MEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+E R +F+ P +D V +++MI GYA NG AL++F M+R++ +P+ +T VL
Sbjct: 95 LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVL 154
Query: 240 SA------------------------CASLGAL------------ELGVWASSFME-RNE 262
SA C S L ELG+ S+ + R
Sbjct: 155 SALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKL 214
Query: 263 FLSNP----VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
F P + TT+I Y + + A +VF M + WNA++SG G + A
Sbjct: 215 FDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEAL 274
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC---- 374
+ ++ GIQ + T+ ++ C + G G+Q + + L P H C
Sbjct: 275 TLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKN-ELNP--NHSFCLSVS 331
Query: 375 --MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++ L ++ ++DEA ++ +MP+ N I W A+L+G
Sbjct: 332 NALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSG 368
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/555 (41%), Positives = 346/555 (62%), Gaps = 3/555 (0%)
Query: 53 HSLIVKAGLDCD--EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ ++ G+ +F K + L ++ A ++F+ I N+ +W +I G+
Sbjct: 55 HAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESE 114
Query: 111 NLEEAINMFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
N A+ +F ++ + PD+ + + A +L D+S + IH V G FV
Sbjct: 115 NPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQ 174
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
SLV +Y+ G++ A +VF+ M +D V+W+S+I G+A NG P EAL ++ M E ++
Sbjct: 175 NSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVE 234
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P+ +TMV +LSAC LGAL LG +M + + N L+D+Y+KCG A KV
Sbjct: 235 PDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKV 294
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F EM+++ V W +++ GL++NG A +FG+LE+ G++P+ TFVG+L C+H G++
Sbjct: 295 FDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGML 354
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
DEG +F M + + P IEH+GCMVDLL R+G++ +A++ I++MP+ PNA++W LL
Sbjct: 355 DEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLG 414
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKI 469
C +H +L E ++ LE +SG++VLLSN+Y++ +W D +R +M KG++K
Sbjct: 415 ACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKT 474
Query: 470 RGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEK 529
G S VE+ V+EF++GD SHP SE+ Y+ L ++ LK G+VP T +VL DIEEEEK
Sbjct: 475 PGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEK 534
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+ L+ H+EK+A+AF L+ T P IRI KNLRVC DCH AIKLISK+ REIIVRD +R
Sbjct: 535 ETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSR 594
Query: 590 FHCFIEGSCSCKDFW 604
FH F +GSCSCKD+W
Sbjct: 595 FHHFKDGSCSCKDYW 609
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 191/333 (57%), Gaps = 8/333 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MIRGF ++ A+E ++ M LP TFPF+ KA A+ D LG HS++V+
Sbjct: 106 MIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRN 165
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D FV+ SL+++Y G L A +VF+ + ++ V+W ++I+G+ G EA+ ++
Sbjct: 166 GFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLY 225
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R + G++PD F++V +L+AC +LG L+ + +H Y+ + G +N + +L+DLY+KC
Sbjct: 226 REMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKC 285
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN A++VFD+M E+ +VSW+S+I G A NG EAL +F ++R+ LKP T VGVL
Sbjct: 286 GNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVL 345
Query: 240 SACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G L+ G + E L ++D+ + G++ A R M +
Sbjct: 346 YACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPN 405
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
V+W ++ +++G++++ G++ + IQ
Sbjct: 406 AVIWRTLLGACTIHGHLEL-----GEVARAEIQ 433
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 16/285 (5%)
Query: 137 VLTACTQLGDL-----STAKWIHGY-----VNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
+L C L L S K IH + V N + +LV L A M A
Sbjct: 33 ILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---MSFAA 89
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACASL 245
++F+Q+ +I +W++MI+G+A + P A+++F M ++ P+ +T + A A L
Sbjct: 90 QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
+ LG S + RN F S + +L+ MY+ G + A +VF M +D+V WN+V+
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVI 209
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
+G ++NG A ++ ++ G++P+G T V LL C G + G + M +V L
Sbjct: 210 NGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKV-GL 268
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++DL + G +A ++ M E + + W +L+ G
Sbjct: 269 VQNQHASNALLDLYSKCGNFRDAQKVFDEME-ERSVVSWTSLIVG 312
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/605 (36%), Positives = 359/605 (59%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G V N+ + A+ ++ M+N G P + ++ A R + G H+ ++ G
Sbjct: 320 LLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNG 379
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + + +L+++Y C + F+ + +K+++SWT II+GY EAIN+FR
Sbjct: 380 LDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFR 439
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ +G+ D I VL AC+ L + + IHGYV + ++ + ++V++Y + G
Sbjct: 440 KVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVG 498
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ ARR F+ + KDIVSW+SMI NG P EAL++FY++++ N++P+ ++ LS
Sbjct: 499 HIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALS 558
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A+L +L+ G F+ R F + ++L+DMYA CG + + K+F +K +D ++
Sbjct: 559 ATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLIL 618
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++++ M+G A +F ++ + P+ TF+ LL C+H+GL+ EG++FF M
Sbjct: 619 WTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMK 678
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L P EHY CMVDLL RS L+EA+ +++MP++P++ +W ALL C +H +L
Sbjct: 679 YGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELG 738
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L+ + NSG Y L+SNI++A +WND ++R M G++K GCSW+EVD
Sbjct: 739 ELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNK 798
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKL-KAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F+ D SHP ++ IY KL + L K G++ T V ++ EEEK L HSE+
Sbjct: 799 IHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSER 858
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LAL +GL+ T IRI KNLR+C DCH K+ S+++ R ++VRD NRFH F G CS
Sbjct: 859 LALGYGLLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCS 918
Query: 600 CKDFW 604
C DFW
Sbjct: 919 CGDFW 923
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 211/415 (50%), Gaps = 9/415 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ FVS+ + AIE Y MR G TFP VLKAC + +LG H + VK G
Sbjct: 116 LMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCG 175
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDI--PDKNVVSWTAIISGYINEGNLEEAINM 118
FV +L+ +Y CG L A +FD I ++ VSW +IIS ++ EGN EA+++
Sbjct: 176 YGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSL 235
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
FRR+ G+ ++++ V L + IHG V ++ +V+VA +L+ +YAK
Sbjct: 236 FRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAK 295
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG ME A RVF+ M +D VSW++++ G N +AL+ F +MQ KP+ +++ +
Sbjct: 296 CGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNL 355
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
++A G L G ++ RN SN +G TL+DMYAKC + F M +KD
Sbjct: 356 IAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDL 415
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ W +++G + N + A +F +++ G+ + +L C+ GL + R F
Sbjct: 416 ISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACS--GL--KSRNFIRE 471
Query: 359 M-SRVFSLTPM-IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ VF I +V++ G G +D A +S+ + + W +++ C
Sbjct: 472 IHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESI-RSKDIVSWTSMITCC 525
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 169/322 (52%), Gaps = 4/322 (1%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
+L C G + H+L++K+ L F+ T L+ +Y CG L DA+KVFD++ ++
Sbjct: 51 LLLDLCVAAKALPQGQQLHALLLKSHLSA--FLATKLVLMYGKCGSLRDAVKVFDEMSER 108
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
+ SW A++ +++ G EAI +++ + G+ D+ + VL AC LG+ IH
Sbjct: 109 TIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD--QMPEKDIVSWSSMIQGYASNGF 212
G + G G VFV +L+ +Y KCG++ AR +FD M ++D VSW+S+I + + G
Sbjct: 169 GVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGN 228
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
EAL +F MQ + YT V L ++LG+ + ++ ++ +
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANA 288
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
LI MYAKCGRM A +VF M +D V WN ++SGL N A F ++ G +P+
Sbjct: 289 LIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPD 348
Query: 333 GNTFVGLLCGCTHAGLVDEGRQ 354
+ + L+ +G + +G++
Sbjct: 349 QVSVLNLIAASGRSGNLLKGKE 370
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/684 (35%), Positives = 376/684 (54%), Gaps = 84/684 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACA-----REHDFQLGVRSHSL 55
MI + N AIE + M+ + F P N+TF VL A A +H QL H
Sbjct: 118 MITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQL----HCA 173
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGY---------LADALKVFDDIPDKNVVSWTAIISGY 106
+VK+G V +L++ YV C +A+A K+FD++P+++ +SWT II+GY
Sbjct: 174 VVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGY 233
Query: 107 INEGNLE-------------------------------EAINMFRRLLHRGLKPDSFSIV 135
+ +L+ EA MFR+++ ++ D F+
Sbjct: 234 VKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFT 293
Query: 136 RVLTACTQLGDLSTAKWIHGY----VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
V++ C G K +H Y V + V +L+ Y KCG ++ A+ +F++
Sbjct: 294 SVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNK 353
Query: 192 MPEKDIVSWSSMIQGY-------------------------------ASNGFPKEALDMF 220
MPE+D+VSW+ ++ GY A GF +EAL F
Sbjct: 354 MPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFF 413
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
M+ + +P Y G + +C+ LG+L+ G + + R + S+ G LI MYA+C
Sbjct: 414 NRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARC 473
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G + A +F M D + WNA+++ L +G A +F ++ K GI P+ +F+ ++
Sbjct: 474 GVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVI 533
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C+HAGLV EGR++F+SM V+ + P EHY ++DLL R+G+ EA E+++SMP EP
Sbjct: 534 SACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPG 593
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSM 460
A +W ALLAGCR+H DL +L L+P + G YVLLSN+Y+ + +WND AK+R +
Sbjct: 594 APIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKL 653
Query: 461 MGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHV 520
M D+G++K GCSW+EV+ VH FLVGD +HP +IY+ L++L +++ G+VP T V
Sbjct: 654 MRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCV 713
Query: 521 LFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGR 580
L D+E + K++ L+ HSEKLA+A+G + +R+ KNLR+CGDCH A K +SK+ GR
Sbjct: 714 LHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGR 773
Query: 581 EIIVRDNNRFHCFIEGSCSCKDFW 604
EI+VRD RFH F +G CSC D+W
Sbjct: 774 EIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 188/445 (42%), Gaps = 84/445 (18%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRR 121
D +T+L+ Y G L + K+F D P ++ V + A+I+ Y + + AI +F
Sbjct: 78 DIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCD 137
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLST-AKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +PD+++ VL A + + + +H V ++G G V +L+ Y KC
Sbjct: 138 MQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCA 197
Query: 181 N---------MEKARRVFDQMPEKDIVSWSS----------------------------- 202
M +AR++FD+MP +D +SW++
Sbjct: 198 ASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAW 257
Query: 203 --MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
MI GYA G EA +MF M ++ + +T V+S CA+ G LG ++ +
Sbjct: 258 NAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLK 317
Query: 261 NEFLSNPV------LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV---------- 304
++NP + LI Y KCG++ A ++F +M ++D V WN +
Sbjct: 318 T--VANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCM 375
Query: 305 ---------------------VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
+SGL+ G+ + A F +++ G +P F G + C
Sbjct: 376 DEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISC 435
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
+ G + GRQ + R + + ++ + R G +D AH L +MP +AI
Sbjct: 436 SVLGSLKHGRQLHAQVVR-YGYESSLSAGNALITMYARCGVVDAAHCLFINMPC-VDAIS 493
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLI 428
W A++A H + A + +++
Sbjct: 494 WNAMIAALGQHGQGTQAIELFEEML 518
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 148/359 (41%), Gaps = 82/359 (22%)
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
S A+ +H ++ +G + L+D+Y+K + AR +FD++P+ DIV+ +++I Y
Sbjct: 30 SLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAY 89
Query: 208 ASNGFPK---------------------------------EALDMFYNMQRENLKPEYYT 234
++ G K A+++F +MQR+N +P+ YT
Sbjct: 90 SAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYT 149
Query: 235 MVGVLSACASLGALELGVWA--SSFMERNEFLSNPVLGTTLIDMYAKCGR---------M 283
VL A A + E + ++ VL LI Y KC M
Sbjct: 150 FTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVL-NALISSYVKCAASPSAQSSSLM 208
Query: 284 AQACKVFREMKDKDQ-------------------------------VVWNAVVSGLSMNG 312
A+A K+F EM ++D+ V WNA++SG + G
Sbjct: 209 AEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRG 268
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ----FFNSMSRVFSLTPM 368
AF +F ++ IQ + TF ++ C +AG G++ F +++ M
Sbjct: 269 LYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAM 328
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ ++ + G++D A E+ MP E + + W +L+G + D A+ N++
Sbjct: 329 PVN-NALITFYWKCGKVDIAQEIFNKMP-ERDLVSWNIILSGYVNVRCMDEAKSFFNEM 385
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/605 (40%), Positives = 361/605 (59%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF N + A++F+ +++ P + +L A R G H+ +K
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNW 243
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + + +L+++Y C +A A VFD + +K+++SWT +I+ Y EA+ + R
Sbjct: 244 LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLR 303
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ +G+ D+ I L AC+ L LS AK +HGY + G ++ + ++D+YA CG
Sbjct: 304 KVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCG 362
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ A R+F+ + KD+VSW+SMI Y NG EAL +FY M+ +++P+ T+V +LS
Sbjct: 363 NINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILS 422
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A ASL AL G F+ R F+ +L+DMYA CG + A KVF + K V+
Sbjct: 423 AAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVL 482
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++ M+G K A +F +E + P+ TF+ LL C+H+GL++EG++ +M
Sbjct: 483 WTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMK 542
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L P EHY C+VDLLGR+ L+EA+ +KSM +EP A VW A L CR+H L
Sbjct: 543 CKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLG 602
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L+ L+P + G+YVL+SN+++AS +W D ++R M G++K GCSW+EV
Sbjct: 603 EIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNK 662
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKL-KAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH FLV D SHP S KIY KL ++ KL K G+VP T VL ++ +EEK L HSE+
Sbjct: 663 VHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSER 722
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GL++T+ IRI KNLRVC DCH KL+SK RE+IVRD +RFH F +G CS
Sbjct: 723 LAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCS 782
Query: 600 CKDFW 604
C DFW
Sbjct: 783 CGDFW 787
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 207/396 (52%), Gaps = 7/396 (1%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
MR G +FTFP VLKAC D G H LI+K G D FV SL+++Y C
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 81 LADALKVFDDIPDKN-VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
+ A K+FD + ++N VVSW +IIS Y G EA+ +FR + G+ +++++V L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
AC IH + ++ + +V+VA +LV ++ + G M A R+FD++ EKD ++
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W+SMI G+ NG EAL F +Q NLKP+ +++ +L+A LG L G ++
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
+N SN +G TLIDMY+KC +A A VF +M +KD + W V++ + N A
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK 300
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SMSRVFSLTPMIEHYGCMVDL 378
+ +++ G+ + L C+ + ++ ++ R S M ++D+
Sbjct: 301 LLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMM---QNMIIDV 357
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
G ++ A + +S+ + + + W ++++ C +H
Sbjct: 358 YADCGNINYATRMFESIKCK-DVVSWTSMIS-CYVH 391
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 230/496 (46%), Gaps = 37/496 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + N A+ + M+ G +T L+AC +LG+ H+ I+K+
Sbjct: 83 IISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSN 142
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V +L+ ++V G ++ A ++FD++ +K+ ++W ++I+G+ G EA+ F
Sbjct: 143 QVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFC 202
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L LKPD S++ +L A +LG L K IH Y + N+ + +L+D+Y+KC
Sbjct: 203 GLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCC 262
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A VFD+M KD++SW+++I YA N EAL + +Q + + + + L
Sbjct: 263 CVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLL 322
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+ L L + + LS+ ++ +ID+YA CG + A ++F +K KD V
Sbjct: 323 ACSGLRCLSHAKEVHGYTLKRG-LSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVS 381
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++S NG A GVF +++ ++P+ T V +L +++G++ +
Sbjct: 382 WTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIF 441
Query: 361 RV------FSLTPMIEHYGC------------------------MVDLLGRSGQLDEAHE 390
R ++ +++ Y C M++ G G+ A E
Sbjct: 442 RKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVE 501
Query: 391 LIKSM---PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL---IALEPWNSGNYVLLSNI 444
L M + P+ I + ALL C + + +L + LEPW L+ +
Sbjct: 502 LFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLL 561
Query: 445 YSASHKWNDAAKIRSM 460
A+H ++SM
Sbjct: 562 GRANHLEEAYHFVKSM 577
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/555 (41%), Positives = 345/555 (62%), Gaps = 3/555 (0%)
Query: 53 HSLIVKAGLDCD--EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ ++ G+ +F K + L ++ A ++F+ I N+ +W +I G+
Sbjct: 55 HAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESE 114
Query: 111 NLEEAINMFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
N A+ +F ++ + PD+ + + A +L D+S + IH V G FV
Sbjct: 115 NPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQ 174
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
SLV +Y+ G E A +VF+ M +D V+W+S+I G+A NG P EAL ++ M E ++
Sbjct: 175 NSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVE 234
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P+ +TMV +LSAC LGAL LG +M + + N L+D+Y+KCG A KV
Sbjct: 235 PDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKV 294
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F EM+++ V W +++ GL++NG A +FG+LE+ G++P+ TFVG+L C+H G++
Sbjct: 295 FDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGML 354
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
DEG +F M + + P IEH+GCMVDLL R+G++ +A++ I++MP+ PNA++W LL
Sbjct: 355 DEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLG 414
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKI 469
C +H +L E ++ LE +SG++VLLSN+Y++ +W D +R +M KG++K
Sbjct: 415 ACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKT 474
Query: 470 RGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEK 529
G S VE+ V+EF++GD SHP SE+ Y+ L ++ LK G+VP T +VL DIEEEEK
Sbjct: 475 PGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEK 534
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+ L+ H+EK+A+AF L+ T P IRI KNLRVC DCH AIKLISK+ REIIVRD +R
Sbjct: 535 ETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSR 594
Query: 590 FHCFIEGSCSCKDFW 604
FH F +GSCSCKD+W
Sbjct: 595 FHHFKDGSCSCKDYW 609
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 191/333 (57%), Gaps = 8/333 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MIRGF ++ A+E ++ M LP TFPF+ KA A+ D LG HS++V+
Sbjct: 106 MIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRN 165
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D FV+ SL+++Y G+ A +VF+ + ++ V+W ++I+G+ G EA+ ++
Sbjct: 166 GFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLY 225
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R + G++PD F++V +L+AC +LG L+ + +H Y+ + G +N + +L+DLY+KC
Sbjct: 226 REMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKC 285
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN A++VFD+M E+ +VSW+S+I G A NG EAL +F ++R+ LKP T VGVL
Sbjct: 286 GNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVL 345
Query: 240 SACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G L+ G + E L ++D+ + G++ A R M +
Sbjct: 346 YACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPN 405
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
V+W ++ +++G++++ G++ + IQ
Sbjct: 406 AVIWRTLLGACTIHGHLEL-----GEVARAEIQ 433
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 16/285 (5%)
Query: 137 VLTACTQLGDL-----STAKWIHGY-----VNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
+L C L L S K IH + V N + +LV L A M A
Sbjct: 33 ILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---MSFAA 89
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACASL 245
++F+Q+ +I +W++MI+G+A + P A+++F M ++ P+ +T + A A L
Sbjct: 90 QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
+ LG S + RN F S + +L+ MY+ G A +VF M +D+V WN+V+
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVI 209
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
+G ++NG A ++ ++ G++P+G T V LL C G + G + M +V L
Sbjct: 210 NGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKV-GL 268
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++DL + G +A ++ M E + + W +L+ G
Sbjct: 269 VQNQHASNALLDLYSKCGNFRDAQKVFDEME-ERSVVSWTSLIVG 312
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/583 (40%), Positives = 356/583 (61%), Gaps = 6/583 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT T+ ++ +C R++ G+ H ++ G D D F+ T L+N+Y + +A KV
Sbjct: 76 PTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKV 135
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ---- 143
FD + + W A+ G E ++++RR+ G+ D F+ VL AC
Sbjct: 136 FDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAF 195
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+ L + IHG++ G +V + T+L+D+YA+ G + A RVFDQMP K++VSWS+M
Sbjct: 196 VSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAM 255
Query: 204 IQGYASNGFPKEALDMFYNMQREN--LKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
I Y+ NG P EAL++F M EN L P TMV VL ACA+L ALE G ++ R
Sbjct: 256 IACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRR 315
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
S + + L+ +YA+CG + +VF M+ +D V WN+++S ++G+ + A +F
Sbjct: 316 GLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIF 375
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ G+ P+ +FV +L C+HAGLV+EG+ F SM R + P +EHY CMVDLLGR
Sbjct: 376 KEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGR 435
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+ +LDEA ++I M +EP VWG+LL CR+H +LAE ++L LEP N+GNYVLL
Sbjct: 436 ANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLL 495
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
++IY+ + WN+ +++ ++ +G+QK+ G S +E+ ++ F+ D +P E++++ L
Sbjct: 496 ADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALL 555
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+L+ ++K G+VP T VL+D++ EEK+ + HSEKLALAFGLI + + IRI KNL
Sbjct: 556 LKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNL 615
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH K ISK REI+VRD NRFH F +G CSC D+W
Sbjct: 616 RLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 174/314 (55%), Gaps = 8/314 (2%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQL----GVRSHSLIVKAGLDCDEFV 67
+ ++ Y M G FT+ +VLKAC F G H I++ G + +
Sbjct: 161 REVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHI 220
Query: 68 KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL--HR 125
T+LL++Y G + +A +VFD +P KNVVSW+A+I+ Y G EA+ +FR+++ ++
Sbjct: 221 MTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQ 280
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
L P+S ++V VL AC L L K +HGY+ G + V ++LV +YA+CGN+E
Sbjct: 281 DLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELG 340
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
RVF++M ++D+VSW+S+I Y +GF ++A+ +F M + L P + V VL AC+
Sbjct: 341 HRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHA 400
Query: 246 GALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNA 303
G +E G V S + ++ + ++D+ + R+ +A K+ +M+ + VW +
Sbjct: 401 GLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGS 460
Query: 304 VVSGLSMNGYVKVA 317
++ ++ V++A
Sbjct: 461 LLGSCRIHCNVELA 474
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 172/343 (50%), Gaps = 20/343 (5%)
Query: 102 IISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG 161
+I +GNL +A+ ++L + P + ++ +CT+ L +H ++ G
Sbjct: 53 LIQSLCKQGNLNQAL----QVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDG 108
Query: 162 KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
++ F+AT L+++Y++ +++ AR+VFD+ ++ I W+++ + G+ +E LD++
Sbjct: 109 SDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYR 168
Query: 222 NMQRENLKPEYYTMVGVLSAC----ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
M R + + +T VL AC A + L G + R+ F + + TTL+DMY
Sbjct: 169 RMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMY 228
Query: 278 AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ--LEKCGIQPNGNT 335
A+ G + A +VF +M K+ V W+A+++ S NG A +F + LE + PN T
Sbjct: 229 ARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVT 288
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
V +L C +++G+ + R + S+ P++ +V + R G L+ H + +
Sbjct: 289 MVSVLQACAALAALEQGKLMHGYILRRGLDSILPVV---SALVTVYARCGNLELGHRVFE 345
Query: 394 SMPMEPNAIVWGALLAGCRLH----KKTDLAEHVLNQLIALEP 432
M + + W +L++ +H K + + +++Q ++ P
Sbjct: 346 RMEKR-DVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSP 387
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 10/211 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI + N A+E + M N+ LP + T VL+ACA + G H I++
Sbjct: 255 MIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILR 314
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
GLD V ++L+ +Y CG L +VF+ + ++VVSW ++IS Y G +AI +
Sbjct: 315 RGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQI 374
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS----LVD 174
F+ ++ +GL P S V VL AC+ G + K + +G +F + +VD
Sbjct: 375 FKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVL---FESMVRGHKIFPSVEHYACMVD 431
Query: 175 LYAKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
L + +++A ++ D M E W S++
Sbjct: 432 LLGRANRLDEAAKIIDDMRIEPGPKVWGSLL 462
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/522 (41%), Positives = 332/522 (63%), Gaps = 1/522 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A ++FD IP ++V + + GY + AI + ++L GL PD ++ +L AC +
Sbjct: 88 AHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACAR 147
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L L K +H + G G N++V +L+++Y C +++ ARRVFD++ E +V+++++
Sbjct: 148 LKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAI 207
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I A N P EAL +F +Q LKP TM+ LS+CA LGAL+LG W ++++N F
Sbjct: 208 ITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGF 267
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ T LIDMYAKCG + A VF++M +D W+A++ + +G+ A + +
Sbjct: 268 DQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLRE 327
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
++K +QP+ TF+G+L C+H GLV+EG ++F+SM+ + + P I+HYGCM+DLLGR+G
Sbjct: 328 MKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAG 387
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
+L+EA + I +P++P I+W LL+ C H ++A+ V+ ++ L+ + G+YV+LSN
Sbjct: 388 RLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSN 447
Query: 444 IYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDE 503
+ + + +W+D +R MM DKG K+ GCS +EV+ VVHEF GD H S ++ LDE
Sbjct: 448 LCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDE 507
Query: 504 LATKLKAAGFVPTTDHVLF-DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
L +LK AG+VP T V + DIE+EEK+ L HSEKLA+ +GL+ T P IR+ KNLR
Sbjct: 508 LVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLR 567
Query: 563 VCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
VC DCH A K IS I GR+II+RD RFH F +G CSC D+W
Sbjct: 568 VCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 177/319 (55%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG+ D AI + + G LP ++TF +LKACAR + G + H L VK G
Sbjct: 106 MARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLG 165
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + +V +L+N+Y C + A +VFD I + VV++ AII+ EA+ +FR
Sbjct: 166 VGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFR 225
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L GLKP +++ L++C LG L +WIH YV + G + V V T+L+D+YAKCG
Sbjct: 226 ELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCG 285
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A VF MP +D +WS+MI YA++G +A+ M M++ ++P+ T +G+L
Sbjct: 286 SLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILY 345
Query: 241 ACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ- 298
AC+ G +E G + S + + +ID+ + GR+ +ACK E+ K
Sbjct: 346 ACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTP 405
Query: 299 VVWNAVVSGLSMNGYVKVA 317
++W ++S S +G V++A
Sbjct: 406 ILWRTLLSSCSSHGNVEMA 424
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 154/329 (46%), Gaps = 14/329 (4%)
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK---CGNM 182
L+P S SI+ ++ CT L +L K I Y + + N V T L++ +M
Sbjct: 30 ALEPPSSSILSLIPKCTSLREL---KQIQAYTIKTHQN-NPTVLTKLINFCTSNPTIASM 85
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
+ A R+FD++P+ DIV +++M +GYA P A+ + + L P+ YT +L AC
Sbjct: 86 DHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKAC 145
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
A L ALE G + N + TLI+MY C + A +VF ++ + V +N
Sbjct: 146 ARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYN 205
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
A+++ + N A +F +L++ G++P T + L C G +D GR + + +
Sbjct: 206 AIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGR-WIHEYVKK 264
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
++ ++D+ + G LD+A + K MP + W A++ H A
Sbjct: 265 NGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRR-DTQAWSAMIVAYATHGHGSQAIS 323
Query: 423 VLNQL--IALEPWNSGNYVLLSNIYSASH 449
+L ++ ++P L +Y+ SH
Sbjct: 324 MLREMKKAKVQP---DEITFLGILYACSH 349
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/636 (36%), Positives = 354/636 (55%), Gaps = 32/636 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I GF S +++ Y ++ R E PT T ++ + D LG H +++
Sbjct: 116 LITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRL 175
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV---------------------- 97
G FV + L+++Y G + DA +VF ++ K VV
Sbjct: 176 GFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLF 235
Query: 98 ---------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+WT +++G G EA+++FRR+ G+ D ++ +LTAC L L
Sbjct: 236 QLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALE 295
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K IH Y+ NVFV ++LVD+Y+KC ++ A VF +M ++I+SW++MI GY
Sbjct: 296 EGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYG 355
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
N +EA+ F MQ + +KP+ +T+ V+S+CA+L +LE G + +
Sbjct: 356 QNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYIT 415
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ L+ +Y KCG + A ++F EM DQV W A+V+G + G K +F ++ G
Sbjct: 416 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANG 475
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
++P+G TF+G+L C+ AGLV++G +F+SM + + P+ +HY CM+DL RSG+ EA
Sbjct: 476 LKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEA 535
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
E IK MP P+A W LL+ CRL ++ + L+ +P N +YVLL ++++A
Sbjct: 536 EEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAK 595
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
+W + A +R M D+ ++K GCSW++ VH F D SHP S +IY KL+ L +K+
Sbjct: 596 GQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
G+ P VL D+ + +K + ++ HSEKLA+AFGLI + IRI KNLRVC DCH
Sbjct: 656 AEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCH 715
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A K ISKITGR+I+VRD RFH F +G+CSC DFW
Sbjct: 716 NATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 199/415 (47%), Gaps = 38/415 (9%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P F +L A A+ R + D + F + +LL+ H + D ++
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARR----VFDEMPDPNLFTRNALLSALAHSRLVPDMERL 101
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGD 146
F +P+++ VS+ A+I+G+ + G+ ++ ++R LL ++P ++ ++ + L D
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP------------- 193
+ +H V G G FV + LVD+YAK G + ARRVF +M
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221
Query: 194 ------------------EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
++D ++W++M+ G NG EALD+F M+ E + + YT
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+L+AC +L ALE G +++ R + N +G+ L+DMY+KC + A VFR M
Sbjct: 282 GSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTC 341
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
++ + W A++ G N + A F +++ GI+P+ T ++ C + ++EG Q
Sbjct: 342 RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ- 400
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F+ ++ V L I +V L G+ G +++AH L M + + W AL+ G
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVTG 454
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/564 (41%), Positives = 337/564 (59%), Gaps = 12/564 (2%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVH---CGYLADALKVFDDI---PDKNVVSWTAIISGY 106
HSLI+K GL + V T H Y + L D P + + +I +
Sbjct: 142 HSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIRAF 201
Query: 107 INEGNLE-EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+ + A+ + + + P+ F+ VL AC + L +H + + G +
Sbjct: 202 AQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFEED 261
Query: 166 VFVATSLVDLYAKC-----GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
V +LV +Y C A++VFD+ P KD V+WS+MI GYA G A+ +F
Sbjct: 262 PHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLF 321
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
MQ + P+ TMV VLSACA LGALELG W S++ER + + L LIDM+AKC
Sbjct: 322 REMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKC 381
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G + +A KVFREMK + V W +++ GL+M+G A VF ++ + G+ P+ F+G+L
Sbjct: 382 GDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVL 441
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C+H+GLVD+G +FN+M +FS+ P IEHYGCMVD+L R+G+++EA E +++MP+EPN
Sbjct: 442 SACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPN 501
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSM 460
++W +++ C + L E V +LI EP + NYVLLSNIY+ +W K+R M
Sbjct: 502 QVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREM 561
Query: 461 MGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHV 520
M KG++KI G + +E++ ++EF+ GD SH ++IY ++E+ ++K AG+VPTT V
Sbjct: 562 MDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPTTSQV 621
Query: 521 LFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGR 580
L DI+EE+K+ L HSEKLA+AF L++T P IRI KNLRVC DCH A K ISK+ R
Sbjct: 622 LLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISKVYNR 681
Query: 581 EIIVRDNNRFHCFIEGSCSCKDFW 604
EI+VRD NRFH F G CSC DFW
Sbjct: 682 EIVVRDRNRFHHFKNGLCSCGDFW 705
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/333 (36%), Positives = 190/333 (57%), Gaps = 10/333 (3%)
Query: 1 MIRGFV-SNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR F + HA+ FYN+MR P FTFPFVLKACA +LG H+ +VK
Sbjct: 197 LIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKF 256
Query: 60 GLDCDEFVKTSLLNLYVHC-----GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEE 114
G + D V+ +L+++Y C A KVFD+ P K+ V+W+A+I GY GN
Sbjct: 257 GFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSAR 316
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A+ +FR + G+ PD ++V VL+AC LG L KW+ Y+ R+V + +L+D
Sbjct: 317 AVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALID 376
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
++AKCG++++A +VF +M + IVSW+SMI G A +G EA+ +F M + + P+
Sbjct: 377 MFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVA 436
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFRE 292
+GVLSAC+ G ++ G + + ME N F P + ++DM ++ GR+ +A + R
Sbjct: 437 FIGVLSACSHSGLVDKGHYYFNTME-NMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRA 495
Query: 293 MK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
M + +QV+W ++V+ G +K+ V +L
Sbjct: 496 MPVEPNQVIWRSIVTACHARGELKLGESVAKEL 528
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/605 (39%), Positives = 363/605 (60%), Gaps = 17/605 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+RG+V A + M + + ++ +L +E R ++ +
Sbjct: 197 MVRGYVKEGMISEAETLFWQMPEKNVV----SWTVMLGGLLQEGRIDEACRLFDMMPEK- 251
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +T+++ Y G L +A +FD++P +NVVSWT +I+GY+ + +++ R
Sbjct: 252 ---DVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQN----QQVDIAR 304
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L + + S +L T G L A + A ++V +++ + + G
Sbjct: 305 KLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFN----AMPIKSVVACNAMILCFGQNG 360
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ KAR+VFDQM EKD +WS+MI+ Y G +AL++F MQRE ++P + +++ VLS
Sbjct: 361 EVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLS 420
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CA L L+ G + + R++F + + + L+ MY KCG +A+A +VF KD V+
Sbjct: 421 VCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVM 480
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++++G + +G A VF + GI P+ TFVG+L C++ G V +G + FNSM
Sbjct: 481 WNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSME 540
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + IEHY CMVDLLGR+G+L+EA +LI+ MPME +AI+WGALL CR H K DLA
Sbjct: 541 TKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLA 600
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L+ LEP N+G ++LLSNIY++ +W+D A++R M D+ + K GCSW+ V+
Sbjct: 601 EVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKK 660
Query: 481 VHEFLVGDNS-HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH+F GD+S HP +I L+ L+ L+ AG+ P VL D++EEEK L HSEK
Sbjct: 661 VHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEK 720
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GL+ IR+ KNLRVCGDCH AIKLI+K+TGREII+RD NRFH F +GSCS
Sbjct: 721 LAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCS 780
Query: 600 CKDFW 604
C+D+W
Sbjct: 781 CRDYW 785
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 159/350 (45%), Gaps = 63/350 (18%)
Query: 63 CDEFV--KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
C F+ + SL+ Y G + A VFD++ DKN++SW +I++GY +EA NMF
Sbjct: 94 CSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFD 153
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ R +T W LV Y G
Sbjct: 154 KMSER----------------------NTISW-----------------NGLVSGYINNG 174
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +AR VFD+MPE+++VSW++M++GY G EA +F+ M +N+ + G+L
Sbjct: 175 MINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQ 234
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
G ++ M + ++ T +I Y + GR+ +A +F EM ++ V
Sbjct: 235 E----GRIDEACRLFDMMPEKDVVTR----TNMIGGYCQVGRLVEARMLFDEMPRRNVVS 286
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G N V +A +F + + N ++ +L G T+ G +DE + FN+M
Sbjct: 287 WTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKGYTNCGRLDEASELFNAM- 341
Query: 361 RVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
P+ C M+ G++G++ +A ++ M E + W A++
Sbjct: 342 ------PIKSVVACNAMILCFGQNGEVPKARQVFDQM-REKDEGTWSAMI 384
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 174/345 (50%), Gaps = 20/345 (5%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++ Y++ G + +A +VFD +P++NVVSWTA++ GY+ EG + EA +F ++ + +
Sbjct: 166 LVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNV--- 222
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S +L Q G + A + + E ++V T+++ Y + G + +AR +FD
Sbjct: 223 -VSWTVMLGGLLQEGRIDEACRLFDMMPE----KDVVTRTNMIGGYCQVGRLVEARMLFD 277
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+MP +++VSW++MI GY N A +F M +N + + M+ + C L
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKN-EVSWTAMLKGYTNCGRLD---- 332
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
+S + + + V +I + + G + +A +VF +M++KD+ W+A++
Sbjct: 333 ---EASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYER 389
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMI 369
G A +F +++ GI+PN + + +L C +D GR+ + R F L +
Sbjct: 390 KGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYV 449
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ + + G L +A ++ ++ + ++W +++ G H
Sbjct: 450 A--SVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQH 491
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 22/264 (8%)
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
+ SL+ Y++ G +EKAR VFD+M +K+I+SW+S++ GY N P+EA +MF M
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
N + G++S + G + M N V T ++ Y K G +++
Sbjct: 158 RNT----ISWNGLVSGYINNGMINEAREVFDRMPER----NVVSWTAMVRGYVKEGMISE 209
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
A +F +M +K+ V W ++ GL G + A +F + + + N ++ G
Sbjct: 210 AETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTN----MIGGYCQ 265
Query: 346 AGLVDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
G + E R F+ M R V S T MI Y ++ Q+D A +L + MP E N +
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGY-------VQNQQVDIARKLFEVMP-EKNEVS 317
Query: 404 WGALLAGCRLHKKTDLAEHVLNQL 427
W A+L G + D A + N +
Sbjct: 318 WTAMLKGYTNCGRLDEASELFNAM 341
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/606 (37%), Positives = 363/606 (59%), Gaps = 4/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G V N+ ++ A+ ++ M+N P + ++ A R + G H+ ++ G
Sbjct: 320 LLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNG 379
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI-NEGNLEEAINMF 119
LD + + +L+++Y C + F+ + +K+++SWT II+GY NE +LE AIN+F
Sbjct: 380 LDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLE-AINLF 438
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R++ +G+ D I VL AC+ L + + IHGYV + ++ + ++V++Y +
Sbjct: 439 RKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEV 497
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+ + ARR F+ + KDIVSW+SMI NG P EAL++FY++++ N++P+ ++ L
Sbjct: 498 GHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISAL 557
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SA A+L +L+ G F+ R F + ++L+DMYA CG + + K+F +K +D +
Sbjct: 558 SATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLI 617
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+W ++++ M+G A +F ++ + P+ TF+ LL C+H+GL+ EG++FF M
Sbjct: 618 LWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIM 677
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ L P EHY CMVDLL RS L+EA++ ++SMP++P++ VW ALL C +H +L
Sbjct: 678 KYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKEL 737
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E +L+ + NSG Y L+SNI++A +WND ++R M G++K GCSW+EVD
Sbjct: 738 GELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDN 797
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKL-KAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
+H F+ D SHP ++ IY KL + L K G++ T V ++ EEEK L HSE
Sbjct: 798 KIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSE 857
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LAL +GL+ T IRI KNLR+C DCH K+ S+++ R ++VRD NRFH F G C
Sbjct: 858 RLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLC 917
Query: 599 SCKDFW 604
SC DFW
Sbjct: 918 SCGDFW 923
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 207/415 (49%), Gaps = 9/415 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ FVS+ + AIE Y MR G TFP VLKAC + +LG H + VK G
Sbjct: 116 MMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCG 175
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDI--PDKNVVSWTAIISGYINEGNLEEAINM 118
FV +L+ +Y CG L A +FD I ++ VSW +IIS ++ EG EA+++
Sbjct: 176 FGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSL 235
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
FRR+ G+ ++++ V L + IHG ++ +V+VA +L+ +YAK
Sbjct: 236 FRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAK 295
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG ME A RVF M +D VSW++++ G N ++AL+ F +MQ KP+ +++ +
Sbjct: 296 CGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNL 355
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
++A G L G ++ RN SN +G TLIDMYAKC + F M +KD
Sbjct: 356 IAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDL 415
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ W +++G + N A +F +++ G+ + +L C+ GL + R F
Sbjct: 416 ISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS--GL--KSRNFIRE 471
Query: 359 M-SRVFSLTPM-IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ VF I +V++ G G D A +S+ + + W +++ C
Sbjct: 472 IHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESI-RSKDIVSWTSMITCC 525
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 167/322 (51%), Gaps = 4/322 (1%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
+L C G + H+ ++K+ L F+ T LL++Y CG L DA+KVFD++ ++
Sbjct: 51 LLLDLCVAVKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTER 108
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
+ +W A++ +++ G EAI +++ + G+ D+ + VL AC LG+ IH
Sbjct: 109 TIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD--QMPEKDIVSWSSMIQGYASNGF 212
G + G G VFV +L+ +Y KCG++ AR +FD M ++D VSW+S+I + + G
Sbjct: 169 GVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGK 228
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
EAL +F MQ + YT V L ++LG+ ++ ++ +
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANA 288
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
LI MYAKCGRM A +VF M +D V WN ++SGL N + A F ++ +P+
Sbjct: 289 LIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPD 348
Query: 333 GNTFVGLLCGCTHAGLVDEGRQ 354
+ + L+ +G + G++
Sbjct: 349 QVSVLNLIAASGRSGNLLNGKE 370
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/606 (38%), Positives = 357/606 (58%), Gaps = 4/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G V ND + AI + M++ G P + ++ A R + G+ H+ +K G
Sbjct: 323 LLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHG 382
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI-NEGNLEEAINMF 119
+D + + SL+++Y C + F+ +P+K+++SWT II+GY NE +L+ A+N+
Sbjct: 383 IDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLD-ALNLL 441
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R++ + D I +L AC+ L K IHGYV + G ++ + ++V++Y +
Sbjct: 442 RKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGEL 500
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ AR VF+ + KDIVSW+SMI NG EAL++F ++ N++P+ T+V VL
Sbjct: 501 ALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVL 560
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A A+L +L+ G F+ R F ++ +L+DMYA+CG M A +F +K +D +
Sbjct: 561 YAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLI 620
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+W ++++ M+G K A +F ++ + P+ TF+ LL C+H+GLV EG+Q F M
Sbjct: 621 LWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIM 680
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ L P EHY C+VDLL RS L+EA+ +++MP+EP+A VW ALL CR+H DL
Sbjct: 681 KNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDL 740
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E +L+ L NSGNYVL+SN ++A +WND ++RS+M ++K GCSW+EV+
Sbjct: 741 GEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVEN 800
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
+H F+ D SHP IY KL + LK G+ T V D+ EEEK L HSE
Sbjct: 801 KIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSE 860
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LAL +GL+ T+ +RI KNLR+C DCH K+ S+I+ R ++VRD +RFH F G C
Sbjct: 861 RLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLC 920
Query: 599 SCKDFW 604
SC DFW
Sbjct: 921 SCGDFW 926
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 226/457 (49%), Gaps = 20/457 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI VS + AIE Y MR G FTFP VLKAC + +LG H + VK G
Sbjct: 119 MIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCG 178
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDD--IPDKNVVSWTAIISGYINEGNLEEAINM 118
FV +L+ +Y CG L A +FD + + VSW +IIS ++ EG EA+++
Sbjct: 179 YGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSL 238
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
FRR+ G++ ++++ V L AC + + IH + ++ +V+V+ +L+ +YA
Sbjct: 239 FRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYAN 298
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG ME A RVF M KD VSW++++ G N +A++ F +MQ KP+ +++ +
Sbjct: 299 CGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNM 358
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
++A L G+ ++ ++ SN +G +LIDMY KC + F M +KD
Sbjct: 359 IAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDL 418
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFG--QLEKCGIQPNGNTFVGLLC-GCTHAGLVDE--GR 353
+ W +++G + N A + QLEK + P + L C G L+ E G
Sbjct: 419 ISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGY 478
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
++ + +I++ +V++ G +D A + +S+ + + + W +++ C
Sbjct: 479 VLKGGLADI-----LIQN--AIVNVYGELALVDYARHVFESINSK-DIVSWTSMITCCVH 530
Query: 414 HKKTDLAEHVLNQLIA--LEPWNSGNYVLLSNIYSAS 448
+ A + N LI +EP L+S +Y+A+
Sbjct: 531 NGLAIEALELFNSLIETNIEP---DLITLVSVLYAAA 564
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 198/421 (47%), Gaps = 24/421 (5%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPF------VLKACAREHDFQLGVRSHSLI 56
R + FQ F+ LPT FP L+ CA G + H+
Sbjct: 18 RPISLKEAFQSLTHFFTDP-----LPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHF 72
Query: 57 VKAGLDCDE-FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
+K D F+ T +++Y CG DA+KVFD + ++ + +W A+I ++ G EA
Sbjct: 73 LKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEA 132
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
I +++ + G+ D+F+ VL AC + IHG + G G VFV +L+ +
Sbjct: 133 IELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAM 192
Query: 176 YAKCGNMEKARRVFDQ--MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
YAKCG++ AR +FD M + D VSW+S+I + G EAL +F MQ ++ Y
Sbjct: 193 YAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTY 252
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T V L AC +++G + + ++ ++ + LI MYA CG+M A +VF+ M
Sbjct: 253 TFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSM 312
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
KD V WN ++SG+ N A F ++ G +P+ + + ++ + + G
Sbjct: 313 LFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGM 372
Query: 354 QFFNSMSRVFSLTPMIE---HYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ +++ I+ H G ++D+ G+ + + MP E + I W ++A
Sbjct: 373 EV-----HAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP-EKDLISWTTIIA 426
Query: 410 G 410
G
Sbjct: 427 G 427
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 203/402 (50%), Gaps = 5/402 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ + M+ G +TF L+AC ++G H++I+K+ D +V +L+
Sbjct: 235 ALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIA 294
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y +CG + DA +VF + K+ VSW ++SG + +AIN F+ + G KPD S
Sbjct: 295 MYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVS 354
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
++ ++ A + +L +H Y + G N+ + SL+D+Y KC ++ F+ MP
Sbjct: 355 VLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP 414
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
EKD++SW+++I GYA N +AL++ +Q E + + + +L AC+ L + +L
Sbjct: 415 EKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKE 474
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
++ + L++ ++ ++++Y + + A VF + KD V W ++++ NG
Sbjct: 475 IHGYVLKGG-LADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGL 533
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHY 372
A +F L + I+P+ T V +L + +G++ + R F L +I +
Sbjct: 534 AIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIAN- 592
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+VD+ R G ++ A + + + + I+W +++ +H
Sbjct: 593 -SLVDMYARCGTMENARNIFNYVK-QRDLILWTSMINANGMH 632
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/605 (39%), Positives = 363/605 (60%), Gaps = 17/605 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+RG+V A + M + + ++ +L +E R ++ +
Sbjct: 197 MVRGYVKEGMISEAETLFWQMPEKNVV----SWTVMLGGLLQEGRIDEACRLFDMMPEK- 251
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +T+++ Y G L +A +FD++P +NVVSWT +I+GY+ + +++ R
Sbjct: 252 ---DVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQN----QQVDIAR 304
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L + + S +L T G L A + A ++V +++ + + G
Sbjct: 305 KLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFN----AMPIKSVVACNAMILCFGQNG 360
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ KAR+VFDQM EKD +WS+MI+ Y G +AL++F MQRE ++P + +++ VLS
Sbjct: 361 EVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLS 420
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CA L L+ G + + R++F + + + L+ MY KCG +A+A +VF KD V+
Sbjct: 421 VCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVM 480
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++++G + +G A VF + GI P+ TFVG+L C++ G V +G + FNSM
Sbjct: 481 WNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSME 540
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + IEHY CMVDLLGR+G+L+EA +LI+ MPME +AI+WGALL CR H K DLA
Sbjct: 541 TKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLA 600
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L+ LEP N+G ++LLSNIY++ +W+D A++R M D+ + K GCSW+ V+
Sbjct: 601 EVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKK 660
Query: 481 VHEFLVGDNS-HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH+F GD+S HP +I L+ L+ L+ AG+ P VL D++EEEK L HSEK
Sbjct: 661 VHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEK 720
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GL+ IR+ KNLRVCGDCH AIKLI+K+TGREII+RD NRFH F +GSCS
Sbjct: 721 LAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCS 780
Query: 600 CKDFW 604
C+D+W
Sbjct: 781 CRDYW 785
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 159/350 (45%), Gaps = 63/350 (18%)
Query: 63 CDEFV--KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
C F+ + SL+ Y G + A VFD++ DKN++SW +I++GY +EA NMF
Sbjct: 94 CSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFD 153
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ R +T W LV Y G
Sbjct: 154 KMSER----------------------NTISW-----------------NGLVSGYINNG 174
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +AR VFD+MPE+++VSW++M++GY G EA +F+ M +N+ + G+L
Sbjct: 175 MINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQ 234
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
G ++ M + ++ T +I Y + GR+ +A +F EM ++ V
Sbjct: 235 E----GRIDEACRLFDMMPEKDVVTR----TNMIGGYCQVGRLVEARMLFDEMPRRNVVS 286
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G N V +A +F + + N ++ +L G T+ G +DE + FN+M
Sbjct: 287 WTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKGYTNCGRLDEASELFNAM- 341
Query: 361 RVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
P+ C M+ G++G++ +A ++ M E + W A++
Sbjct: 342 ------PIKSVVACNAMILCFGQNGEVPKARQVFDQM-REKDEGTWSAMI 384
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 174/345 (50%), Gaps = 20/345 (5%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++ Y++ G + +A +VFD +P++NVVSWTA++ GY+ EG + EA +F ++ + +
Sbjct: 166 LVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNV--- 222
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S +L Q G + A + + E ++V T+++ Y + G + +AR +FD
Sbjct: 223 -VSWTVMLGGLLQEGRIDEACRLFDMMPE----KDVVTRTNMIGGYCQVGRLVEARMLFD 277
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+MP +++VSW++MI GY N A +F M +N + + M+ + C L
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKN-EVSWTAMLKGYTNCGRLD---- 332
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
+S + + + V +I + + G + +A +VF +M++KD+ W+A++
Sbjct: 333 ---EASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYER 389
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMI 369
G A +F +++ GI+PN + + +L C +D GR+ + R F L +
Sbjct: 390 KGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYV 449
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ + + G L +A ++ ++ + ++W +++ G H
Sbjct: 450 A--SVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQH 491
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 22/264 (8%)
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
+ SL+ Y++ G +EKAR VFD+M +K+I+SW+S++ GY N P+EA +MF M
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
N + G++S + G + M N V T ++ Y K G +++
Sbjct: 158 RNT----ISWNGLVSGYINNGMINEAREVFDRMPER----NVVSWTAMVRGYVKEGMISE 209
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
A +F +M +K+ V W ++ GL G + A +F + + + N ++ G
Sbjct: 210 AETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTN----MIGGYCQ 265
Query: 346 AGLVDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
G + E R F+ M R V S T MI Y ++ Q+D A +L + MP E N +
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGY-------VQNQQVDIARKLFEVMP-EKNEVS 317
Query: 404 WGALLAGCRLHKKTDLAEHVLNQL 427
W A+L G + D A + N +
Sbjct: 318 WTAMLKGYTNCGRLDEASELFNAM 341
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/605 (37%), Positives = 360/605 (59%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G NDCF AI+ + M F P T VL A A ++ H V+ G
Sbjct: 93 LISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV+T+L+++Y G + A ++F+ + ++NVV+W AI+SGY + G EEAI++F
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFN 212
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +GL D ++I+ ++ A +G L IHG++ G + + T+L+D+Y
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGVL 239
++ A RVF +M KD+ +W+ M+ G++S A+ F M +NLK + ++G+L
Sbjct: 273 CVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGIL 332
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
S+C+ GAL+ G + + F +N +G+ +IDMYA CG + A + F M +KD V
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV 392
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA+++G MNGY A +F Q++ G+ P+ +TFV +L C+HAG+V EG Q F M
Sbjct: 393 CWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHM 452
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + P ++HY C++D+LGR+GQLD A+ I +MP +P+ V+ LL CR+H L
Sbjct: 453 VKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKL 512
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ ++ +EP ++G YVLLSN+Y+ + W R+ + K ++K G S +E++
Sbjct: 513 GHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQ 572
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
++ F+ G+ HP KI L L K+K AG+VP T+ +L D+ ++ K+ L HSEK
Sbjct: 573 EIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEK 632
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
+A+AFGL+ T P+ +IRI KNLR C DCH A K +SK+ GR ++++D NRFH F +G CS
Sbjct: 633 MAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCS 692
Query: 600 CKDFW 604
C+D+W
Sbjct: 693 CRDYW 697
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 224/402 (55%), Gaps = 12/402 (2%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ I+ +GL + F+ SL+N YV+CG LADA ++F P KNVVSWT +ISG
Sbjct: 44 HAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCF 103
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
EAI++FR ++ KP++ +I VL A LG + AK +H + G NVFV T+L
Sbjct: 104 VEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETAL 163
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
VD+Y+K G M AR++F+ M E+++V+W++++ GY+ +GF +EA+D+F M+R+ L ++
Sbjct: 164 VDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDF 223
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
YT++ ++ A S+G L++G F+ R + ++ + T L+D+Y + A +VF E
Sbjct: 224 YTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSE 283
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP---NGNTFVGLLCGCTHAGLV 349
M KD W +++G S + A F ++ GIQ + +G+L C+H+G +
Sbjct: 284 MSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM--LGIQNLKLDSIALMGILSSCSHSGAL 341
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+GR+ ++++ I ++D+ G L++A M E + + W A++A
Sbjct: 342 QQGRR-VHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNAMIA 399
Query: 410 GCRLHKKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSASH 449
G ++ A + Q+ L+P S +S +Y+ SH
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDES---TFVSVLYACSH 438
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 151/308 (49%), Gaps = 4/308 (1%)
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
+L DL + IH + +G N F++ SL++ Y CG + A+++F P K++VSW+
Sbjct: 33 KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTI 92
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
+I G A N EA+D+F M N KP T+ VL A A+LG + + F R
Sbjct: 93 LISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
F N + T L+DMY+K G M A ++F M +++ V WNA+VSG S +G+ + A +F
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFN 212
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGR 381
+ + G+ + T + L+ G + G + R + I+ ++D+
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIK--TALMDIYVS 270
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+D+AH + M ++ A W +L G + D A N+++ ++ + L+
Sbjct: 271 HNCVDDAHRVFSEMSVKDVA-AWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALM 329
Query: 442 SNIYSASH 449
+ S SH
Sbjct: 330 GILSSCSH 337
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/586 (39%), Positives = 346/586 (59%)
Query: 19 NSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC 78
N +R E L FT +L+ CA+ +G H L + GL D L+NLY C
Sbjct: 45 NLVRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKC 104
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G A +VFD + ++++SW +I+GY + EA+ +F R+ G + F++ L
Sbjct: 105 GQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTL 164
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
AC + K +H + + FV T+ +D+YAKC ++ A VF+ MPEK V
Sbjct: 165 CACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSV 224
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+WSS+ G+ NG +E L +F + QRE ++ +T+ +LS CASL + G + +
Sbjct: 225 TWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVI 284
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
++ F N + T+L+D+YAKCG++ ++ +VF +M++K+ V+WNA+++ S + + A
Sbjct: 285 VKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAM 344
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
+F ++++ GI PN T++ +L C+H GLV+EGR +FN + + P + HY CMVD+
Sbjct: 345 ILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDV 404
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNY 438
LGRSG+ DEA +L+ MP EP A +WG+LL R+HK LA QL LEP N GN+
Sbjct: 405 LGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNH 464
Query: 439 VLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIY 498
VLLSN+Y+AS W + R + D G +K G SW+E G +H F+ G+ HP +Y
Sbjct: 465 VLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVY 524
Query: 499 SKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIA 558
+KL+E+ +++ T L D+ ++K+ L HSEKLA AFGLI+ P I I
Sbjct: 525 NKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIY 584
Query: 559 KNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLR+CGDCH +K++S IT R++IVRD NRFH F +GSCSC DFW
Sbjct: 585 KNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 180/336 (53%), Gaps = 2/336 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N A++ ++ M EG T FT L ACA ++ + H++ +K
Sbjct: 128 MIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLA 187
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD FV T+ L++Y C + DA VF+++P+K V+W+++ +G++ G EE + +F+
Sbjct: 188 LDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQ 247
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
G++ F++ +L+ C L + +H + + G RN+FVATSLVD+YAKCG
Sbjct: 248 STQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCG 307
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+EK+ VF M EK++V W++MI ++ + EA+ +F MQ+ + P T + +LS
Sbjct: 308 QIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILS 367
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G +E G + + + VL + ++D+ + G+ +A K+ +M +
Sbjct: 368 ACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTA 427
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+W +++ ++ +++A QL + + GN
Sbjct: 428 SMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGN 463
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/605 (39%), Positives = 353/605 (58%), Gaps = 36/605 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF N C A+EF+ M+ EGF T++T VL AC++ D + G + H IV
Sbjct: 126 VIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATS 185
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L FV +L N+Y CG L A +FD + +KNVVSW ++ISGY+ G E +F
Sbjct: 186 LGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFC 245
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GL PD +I +L+A Y +CG
Sbjct: 246 EMQSSGLMPDQVTISNILSA-----------------------------------YFQCG 270
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++A + F ++ EKD V W++M+ G A NG ++AL +F M EN++P+ +T+ V+S
Sbjct: 271 YIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVS 330
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+CA L +L G + ++ + L+DMY+KCG A A VF+ M ++ +
Sbjct: 331 SCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVIS 390
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN+++ G + NG A ++ ++ ++P+ TFVG+L C HAGLV+ G+ +F S+S
Sbjct: 391 WNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSIS 450
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++ + P +HY CM++LLGR+G +D+A +LIKSM EPN ++W LL+ CR++ +
Sbjct: 451 KIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNG 510
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E L L+P N+G Y++LSNIY+A +W D A +RS+M + I+K SW+E+D
Sbjct: 511 EMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQ 570
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH+F+ D +H +E+IY +L+ L KL+ +GF P T+ VL D+ EEEK + HSEKL
Sbjct: 571 VHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKL 630
Query: 541 ALAFGLITTAP-KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
ALAF LI + IRI KN+RVCGDCH +K +SKI R II+RD NRFH FIEG CS
Sbjct: 631 ALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCS 690
Query: 600 CKDFW 604
CKD W
Sbjct: 691 CKDSW 695
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 192/411 (46%), Gaps = 69/411 (16%)
Query: 32 TFPFVLKACAREHDFQLGVRSHS-LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDD 90
++ +L C R +D R + + + D F++ LL+LY G L+DA +FD
Sbjct: 24 SYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDK 83
Query: 91 IPDKNVVSWTAIISGYINEGNLE-------------------------------EAINMF 119
+ ++V SW A++S Y GN+E +A+ F
Sbjct: 84 MSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFF 143
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ G + ++ V VL AC+QL D+ K IHG + G +VFV +L ++YAKC
Sbjct: 144 VRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKC 203
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +++AR +FD+M K++VSW+SMI GY NG P+ +F MQ L P+ T+ +L
Sbjct: 204 GALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNIL 263
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SA Y +CG + +ACK FRE+K+KD+V
Sbjct: 264 SA-----------------------------------YFQCGYIDEACKTFREIKEKDKV 288
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W ++ G + NG + A +F ++ ++P+ T ++ C + +G Q +
Sbjct: 289 CWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQG-QAVHGK 347
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ +F + + +VD+ + G+ +A + K M + N I W +++ G
Sbjct: 348 AVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRM-LTRNVISWNSMILG 397
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 161/335 (48%), Gaps = 13/335 (3%)
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL-LHRGLKPDSFSIVRVLT 139
L +A+ N S+T ++ + ++ +A + + LH D+F R+L
Sbjct: 7 LREAIDALYSRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLH 66
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
+ G+LS A+ + ++ R+VF +++ Y+K GN+E R VFDQM D VS
Sbjct: 67 LYAKSGNLSDARDLFDKMSR----RDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVS 122
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
++++I G++ NG +AL+ F MQ E + YT V VL AC+ L ++ G +
Sbjct: 123 YNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIV 182
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
+ + L +MYAKCG + QA +F M +K+ V WN+++SG NG +
Sbjct: 183 ATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTK 242
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F +++ G+ P+ T +L G +DE + F + + GC
Sbjct: 243 LFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGC----- 297
Query: 380 GRSGQLDEAHELIKSMPME---PNAIVWGALLAGC 411
++G+ ++A L + M +E P+ ++++ C
Sbjct: 298 AQNGKEEDALLLFREMLLENVRPDNFTISSVVSSC 332
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/566 (40%), Positives = 349/566 (61%), Gaps = 16/566 (2%)
Query: 53 HSLIVKAG--LDCDEFVKTSLLNLYVHCG-----YLADALKVFDDIPDKNVVSW-TAIIS 104
H++ VKAG L T LL L G +LA A +VFD IP V W ++
Sbjct: 48 HAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNTLLR 107
Query: 105 GYINEGNL----EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
GY G EEA +F R++ G+ PD+++ V +L AC + HG +A
Sbjct: 108 GYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKA 167
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
G + +VA +L+++YA+CG++ AR +FD+M + +VS+++MI + P EAL +F
Sbjct: 168 GAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLF 227
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
MQ + LKP T++ VLSACA LGALELG W ++ + S + T LIDMYAKC
Sbjct: 228 REMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKC 287
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G + A VF++M+ +D+ W+ ++ + +GY + A +F +++K G++P+ TF+G+L
Sbjct: 288 GSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVL 347
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C+H+G+V EG Q+F+SM R + + I+HYGC+ DLL RSGQL+ A++ I +P++P
Sbjct: 348 YACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPT 406
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSM 460
AI+W LL+ C H D+ + V +++ L+ + G+YV+ SN+ + + +W + +R +
Sbjct: 407 AILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKL 466
Query: 461 MGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHV 520
M +KG+ K+ GCS +E+D +VHEF GD SHP S++ +DE+ +LK G+VP T HV
Sbjct: 467 MSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHV 526
Query: 521 LFDIE--EEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKIT 578
F +E EEEK L HSEKLA++FGL+ TAP +RI KNLRVC DCH KL+S +
Sbjct: 527 -FHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVF 585
Query: 579 GREIIVRDNNRFHCFIEGSCSCKDFW 604
R II+RD NRFH F +G CSC D+W
Sbjct: 586 NRRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 201/379 (53%), Gaps = 10/379 (2%)
Query: 1 MIRGFV----SNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLI 56
++RG+ C + A + M EG P +TF +LKACA + G ++H +
Sbjct: 105 LLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVA 164
Query: 57 VKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
VKAG E+V +L+N+Y CG + A +FD + + VVS+ A+I+ + EA+
Sbjct: 165 VKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEAL 224
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+FR + +GLKP S +++ VL+AC LG L +WIH Y+ + V V T+L+D+Y
Sbjct: 225 VLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMY 284
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
AKCG++E A VF M +D +WS M+ YA++G+ +EA+ MF M+++ +KP+ T +
Sbjct: 285 AKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFL 344
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
GVL AC+ G + G+ M +S + D+ A+ G++ +A K E+ K
Sbjct: 345 GVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIK 404
Query: 297 DQ-VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
++W ++S + +G V + VF ++ + +G +V C + G +E
Sbjct: 405 PTAILWRTLLSACAGHGDVDMGKRVFERILELD-DSHGGDYVIFSNLCANTGRWEE---- 459
Query: 356 FNSMSRVFSLTPMIEHYGC 374
N + ++ S +++ GC
Sbjct: 460 MNMVRKLMSEKGVVKVPGC 478
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/540 (41%), Positives = 342/540 (63%), Gaps = 1/540 (0%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM-FRRLLH 124
F+ L++ YV G DAL++FD++PDK++VSW ++ISG+ +L + + FR
Sbjct: 74 FIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFE 133
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
GLKP+ +++ V++AC +G+L K IHG ++G V V SL++LY KCG +E
Sbjct: 134 MGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEA 193
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
A +F+ M + +VSW+SM+ + G ++ + F M+R + + T+V +L AC +
Sbjct: 194 ACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACEN 253
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
LG +L ++ N + T L+D+YAK G ++ +CKVF M + D V W A+
Sbjct: 254 LGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAM 313
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
+S +M+G + A F + + G+ P+ TF LL C+H+GLV+EG+ +F M +
Sbjct: 314 LSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYG 373
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ +EHY CMVDLLGRSG L++A++LIKSMPMEPN+ VWGAL+ CR+ +L + V
Sbjct: 374 VELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVA 433
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+L +L+P +S NY+ LSN+YSA+ +W DA+K+R++M ++ + + GCS++E +H F
Sbjct: 434 ERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCF 493
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
++GD SHP +E+IY+KL+EL K + GF T++VL D++EE K+ + HSEKLA+AF
Sbjct: 494 VMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAF 553
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
GL+ T + I KN+R+CGDCH KLIS I R II+RD RFH F G CSC D+W
Sbjct: 554 GLLVTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 162/302 (53%), Gaps = 7/302 (2%)
Query: 21 MRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCG 79
MR E G P T V+ ACA + +G H + VK+G+ + V SL+NLY CG
Sbjct: 130 MRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCG 189
Query: 80 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
L A +F+ + +++VSW ++++ +++ G E+ I F + G+ D ++V +L
Sbjct: 190 CLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLL 249
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
AC LG A+ +HGY+ G N+ +AT+L+DLYAK G + + +VF M D V+
Sbjct: 250 ACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVA 309
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W++M+ YA +G +EA++ F M RE + P++ T +LSAC+ G +E G + F
Sbjct: 310 WTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEG--KNYFKI 367
Query: 260 RNEFLSNPVL---GTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVK 315
EF + + ++D+ + G + A K+ + M + + VW A++ + G ++
Sbjct: 368 MYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIE 427
Query: 316 VA 317
+
Sbjct: 428 LG 429
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 142/284 (50%), Gaps = 9/284 (3%)
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
++TA + +S + +H V ++ + F+ LV Y + G + A +FD++P+KD
Sbjct: 44 LITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKD 103
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWAS 255
+VSW+S+I G++ L + + M+ E LKP T++ V+SACA +G L++G
Sbjct: 104 LVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIH 163
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
++ L + +LI++Y KCG + AC +F M + V WN++V+ G +
Sbjct: 164 GIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAE 223
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF---SLTPMIEHY 372
G F + + GI + T V LL C + G+ R+ ++ L +
Sbjct: 224 KGIGYFIMMRRAGINSDQATVVSLLLACENLGV----RKLAEAVHGYILNGGLDGNLAIA 279
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
++DL + G L ++ ++ M + P+A+ W A+L+ +H +
Sbjct: 280 TALLDLYAKLGTLSDSCKVFGGM-INPDAVAWTAMLSSYAMHGR 322
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 9/261 (3%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ I ++ MR G T +L AC +L H I+ GLD + + T+L
Sbjct: 223 EKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATAL 282
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
L+LY G L+D+ KVF + + + V+WTA++S Y G EAI F ++ G+ PD
Sbjct: 283 LDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDH 342
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNE-AGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ +L+AC+ G + K + E G V + +VDL + G++ A ++
Sbjct: 343 VTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIK 402
Query: 191 QMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
MP E + W ++I G KE + +++ + + Y T+ + SA G
Sbjct: 403 SMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSR-NYITLSNMYSAA---G 458
Query: 247 ALELGVWASSFMERNEFLSNP 267
+ M+ + NP
Sbjct: 459 QWRDASKVRALMKERVLIRNP 479
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK-A 59
M+ + + + AIE + M EG +P + TF +L AC+ + G ++ +
Sbjct: 313 MLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFY 372
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINM 118
G++ + +++L G+L DA K+ +P + N W A+I GN+E +
Sbjct: 373 GVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEV 432
Query: 119 FRRLL 123
RL
Sbjct: 433 AERLF 437
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/571 (39%), Positives = 347/571 (60%), Gaps = 2/571 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L C + + G R H+ ++K +++T L+ LY C L DA +FD++P +N
Sbjct: 68 ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRN 127
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
VVSWTA+IS Y G EA+N+F +L +P+ F+ +LT+C T + IH
Sbjct: 128 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS 187
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ ++FV +SL+D+YAK G + A VF +PE+D+V+ +++I GYA G +E
Sbjct: 188 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 247
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL +F +Q E + T VL+A + L AL G S + R+ S VL +LID
Sbjct: 248 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLID 307
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQPNGN 334
MY+KCG + A ++F M ++ + WNA++ G S +G + +F + E+ ++P+
Sbjct: 308 MYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSI 367
Query: 335 TFVGLLCGCTHAGLVDEGRQ-FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
T++ +L GC+H L D G + F+N ++ + P I HYGC+VDLLGR+G+++EA + IK
Sbjct: 368 TYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIK 427
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWND 453
MP P A +WG+LL CR+H ++ V +L+ LEP N+GNYV+LSN+Y+++ KW D
Sbjct: 428 KMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWED 487
Query: 454 AAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF 513
IR +M +K + K G SWVE+D +VH F D++HP E++ +K+ EL+ K K G+
Sbjct: 488 MRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDGY 547
Query: 514 VPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKL 573
VP VL+D++EE+K+ L HSEKLALAFGLI T IR+ KNLR+C DCH K
Sbjct: 548 VPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKF 607
Query: 574 ISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+S++ R +I+RD NRFH + G CSC D+W
Sbjct: 608 VSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 184/341 (53%), Gaps = 4/341 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + A+ + M P +FTF +L +C F+ G + HS+ +K
Sbjct: 134 MISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRN 193
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +SLL++Y G + DA VF +P+++VV+ TAIISGY G EEA+ +FR
Sbjct: 194 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 253
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G+ +S + VLTA + L L+ K +H +V +G+ V + SL+D+Y+KCG
Sbjct: 254 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 313
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVL 239
N+ ARR+FD MPE+ +SW++M+ GY+ +G +E L++F M+ EN +KP+ T + VL
Sbjct: 314 NVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVL 373
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DK 296
S C+ ++G+ M + P +G ++D+ + GR+ +A ++M
Sbjct: 374 SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVP 433
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
+W +++ ++ V++ V +L + + GN +
Sbjct: 434 TAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVI 474
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/681 (35%), Positives = 370/681 (54%), Gaps = 78/681 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR--EHDFQLGVRSHSLIVK 58
MI G+ N A+E + +MR + F P +FTF VL A ++ Q G + H +VK
Sbjct: 118 MITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCG-QMHCAVVK 176
Query: 59 AGLDC-DEFVKTSLLNLYVH--------CGYLADALKVFDDIPDKNVVSWT--------- 100
G+ C V +LL++YV C + A K+FD++P ++ ++WT
Sbjct: 177 TGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRN 236
Query: 101 ----------------------AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
A+ISGY++ G +EA+ + R++ G++ D + ++
Sbjct: 237 DDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTII 296
Query: 139 TACTQLGDLSTAKWIHGYV--------------------------NEAGKGRNVFVATSL 172
+AC +G K +H Y+ N+ + R +F A +
Sbjct: 297 SACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPV 356
Query: 173 VDL---------YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
++ Y G ME+A+ F++MP K++++ + MI G A NGF E L +F M
Sbjct: 357 RNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQM 416
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
+ + +P + G L+AC+ LGALE G + + + S+ +G +I MYAKCG +
Sbjct: 417 RLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVV 476
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
A VF M D V WN++++ L +G+ A +F Q+ K G+ P+ TF+ +L C
Sbjct: 477 EAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTAC 536
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
+HAGLV++GR +FNSM + +TP +HY MVDL R+G A +I SMP +P A V
Sbjct: 537 SHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPV 596
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGD 463
W ALLAGCR+H DL QL L P N G YVLLSNIY+ +WN+ AK+R +M D
Sbjct: 597 WEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRD 656
Query: 464 KGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
+ ++K CSW+EV+ VH F+V D+ HP +Y L++L ++K G++P T VL D
Sbjct: 657 QAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHD 716
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
+E E+K++ L+ HSEKLA+ FG++ P +R+ KN+R+CGDCH A K +SK+ REII
Sbjct: 717 MEYEQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREII 776
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
VRD RFH F G CSC+D+W
Sbjct: 777 VRDRKRFHHFKNGDCSCRDYW 797
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 191/443 (43%), Gaps = 80/443 (18%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRR 121
D +T+L+ Y G L ++F+ P ++ V + A+I+GY + G+ A+ +FR
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 122 LLHRGLKPDSFSIVRVLTACTQ-LGDLSTAKWIHGYVNEAGKG-RNVFVATSLVDLYAK- 178
+ +PD F+ VL+A +G+ +H V + G G + V +L+ +Y K
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197
Query: 179 -------CGNMEKARRVFDQMPEKDIVSWSSMIQGYASN--------------------- 210
C M AR++FD+MP++D ++W++MI GY N
Sbjct: 198 ASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257
Query: 211 ----------GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
G +EAL + M+ ++ + T ++SACA++G+ ++G +++ +
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILK 317
Query: 261 NEFLSNP----VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV------------ 304
NE N + LI +Y K ++ +A K+F M ++ + WNA+
Sbjct: 318 NELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEE 377
Query: 305 -------------------VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
+SGL+ NG+ +F Q+ G +P F G L C+
Sbjct: 378 AKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSV 437
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
G ++ GRQ + + + M+ + + G ++ A + +MP + + W
Sbjct: 438 LGALENGRQLHAQLVHL-GYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWN 495
Query: 406 ALLAGCRLHKKTDLAEHVLNQLI 428
+++A H A + +Q++
Sbjct: 496 SMIAALGQHGHGVKAIELFDQML 518
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 147/338 (43%), Gaps = 57/338 (16%)
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
++ G KP + R+L + +L A+ + E + T+L+ Y GN
Sbjct: 39 MIASGFKPRGHFLNRLLEMYCKSSNLVYARQLF----EEIPNPDAIARTTLITAYCALGN 94
Query: 182 MEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+E R +F+ P +D V +++MI GYA NG AL++F M+R++ +P+ +T VL
Sbjct: 95 LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVL 154
Query: 240 SA------------------------CASLGAL------------ELGVWASSFME-RNE 262
SA C S L ELG+ S+ + R
Sbjct: 155 SALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKL 214
Query: 263 FLSNP----VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
F P + TT+I Y + + A +VF M + WNA++SG G + A
Sbjct: 215 FDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEAL 274
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC---- 374
+ ++ GIQ + T+ ++ C + G G+Q + + L P H C
Sbjct: 275 TLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKN-ELNP--NHSFCLSVS 331
Query: 375 --MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++ L ++ ++DEA ++ +MP+ N I W A+L+G
Sbjct: 332 NALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSG 368
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/616 (39%), Positives = 365/616 (59%), Gaps = 42/616 (6%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALK 86
LP++ TF +LK R Q+ + H+ +V GL + + L++ Y+ C L+ A
Sbjct: 52 LPSHSTFVQLLKK--RPSLTQIK-QIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARI 108
Query: 87 VFDDIPD-KNVVSWTAIISGYINEGNLEEAINMFRRLLHRG--LKPDSFSIVRVLTACTQ 143
VFD P + W +I Y + +E++ +F ++L G D ++ V TAC++
Sbjct: 109 VFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSR 168
Query: 144 LGDL-STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
L + +HG V + G ++FV SLV++Y+ M A+RVFD+MP++D+++W+S
Sbjct: 169 HPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTS 228
Query: 203 MIQGYASNG-------------------------------FPKEALDMFYNMQ-RENLKP 230
+++GYA G F EAL F +M + +KP
Sbjct: 229 VVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKP 288
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+V +LSACA LGAL+ G W ++++N L + + T LIDMYAKCGR+ A +VF
Sbjct: 289 NEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVF 348
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+ +D + W +++SGLSM+G F ++ G +P+ T +G+L GC+H+GLV+
Sbjct: 349 DGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVE 408
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
EG F+ M ++ + P +EHYGC++DLLGR+G+L+ A E IKSMPMEP+ + W ALL+
Sbjct: 409 EGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSA 468
Query: 411 CRLHKKTDLAEHVLNQLIALEPW-NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKI 469
CR+H DL E ++N + L P + G YVLLSN+Y++ +W K+R M +G +
Sbjct: 469 CRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGC 528
Query: 470 RGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEE 528
GCSW+E+DGVVHEFL D HP +I KL+E+ ++ G+VP+T VLFD+ EE+
Sbjct: 529 PGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEED 588
Query: 529 KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNN 588
K+ ++ HSEKLA+AFGL++T + IRI KNLR C DCH A+K IS + REI+VRD +
Sbjct: 589 KEQAVSWHSEKLAVAFGLLSTQ-EGTIRITKNLRTCEDCHSAMKTISLVFNREIVVRDRS 647
Query: 589 RFHCFIEGSCSCKDFW 604
RFH F G+CSC D+W
Sbjct: 648 RFHTFRYGNCSCTDYW 663
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMR-NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+ G+V + + A++ +N M ++ P +L ACA G H I K
Sbjct: 260 MVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKN 319
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ + T+L+++Y CG + A +VFD + +++++WT++ISG G E + F
Sbjct: 320 RILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTF 379
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI-HGYVNEAGKGRNVFVATSLVDLYAK 178
+L G KPD +++ VL C+ G + I H + G + L+DL +
Sbjct: 380 SEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGR 439
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG 211
G +E A MP E D+V+W +++ +G
Sbjct: 440 AGRLESAFEAIKSMPMEPDVVAWRALLSACRIHG 473
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/614 (37%), Positives = 360/614 (58%), Gaps = 37/614 (6%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + T+ V+ + G + H+ IV G D D V T+L+N+Y CG +A +V
Sbjct: 205 PNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREV 264
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD + +++VSW +I Y+ G+ EA+ ++++L G K + V +L AC+ + L
Sbjct: 265 FDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKAL 324
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ + +H ++ E G V VAT+LV++YAKCG++E+AR+VF+ M +D V+WS++I Y
Sbjct: 325 AQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAY 384
Query: 208 ASNGFPKEA----------------------------------LDMFYNMQ-RENLKPEY 232
ASNG+ K+A + +F M LKP+
Sbjct: 385 ASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDA 444
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
T + VL ACASLG L + + +E SN V+ TLI+MYA+CG + +A ++F
Sbjct: 445 VTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAA 504
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
K+K V W A+V+ S G A +F +++ G++P+ T+ +L CTH G +++G
Sbjct: 505 AKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQG 564
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
++F M+ + +L P +H+ MVDLLGRSG+L +A EL++SMP EP+ + W L CR
Sbjct: 565 WRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACR 624
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
+H K +L E ++ L+P ++ Y+ +SNIY+A W A +R M ++G++K+ G
Sbjct: 625 IHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGL 684
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF 532
S++EVDG +HEF G HP +++I +L L ++AAG+VP T VL D+ E EK+
Sbjct: 685 SFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETM 744
Query: 533 LACHSEKLALAFGLITT-APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L HSEK+A+AFGL+++ + IR+ KNLRVC DCH A K I++I GR+IIVRD NRFH
Sbjct: 745 LLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFH 804
Query: 592 CF-IEGSCSCKDFW 604
F +G CSC D+W
Sbjct: 805 RFSSDGKCSCGDYW 818
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 209/445 (46%), Gaps = 41/445 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + N A+ Y M +G + TF VL AC+ G H+ + +G
Sbjct: 81 MIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYSG 137
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + + +L+ +Y G + DA ++F + ++ SW A+I + G+ A+ +F+
Sbjct: 138 LDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFK 197
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +KP+S + + V++ + L + IH + G ++ VAT+L+++Y KCG
Sbjct: 198 EM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCG 256
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +AR VFD+M ++D+VSW+ MI Y NG EAL+++ + E K T V +L
Sbjct: 257 SSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILG 316
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+S+ AL G S + S + T L++MYAKCG + +A KVF MK++D V
Sbjct: 317 ACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVA 376
Query: 301 WNAVVSGLSMNGYVK----------------------------------VAFGVFGQLE- 325
W+ ++ + NGY K A +F ++
Sbjct: 377 WSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTG 436
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
G++P+ TF+ +L C G + E + +S L + ++++ R G L
Sbjct: 437 AAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISES-ELESNVVVTNTLINMYARCGSL 495
Query: 386 DEAHELIKSMPMEPNAIVWGALLAG 410
+EA L + E + W A++A
Sbjct: 496 EEAERLFAAAK-EKTVVSWTAMVAA 519
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 197/385 (51%), Gaps = 8/385 (2%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P N TF VL +C+ D G H I + + D V +L+++Y C L DA V
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 88 FD--DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
F+ D +NVVSW A+I+ Y G+ EA+ ++ R+ +GL D + V VL AC+
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS-- 122
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
L+ + IH V +G +A +LV +YA+ G++ A+R+F + +D SW+++I
Sbjct: 123 -LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
++ +G AL +F M + ++KP T + V+S ++ L G + + N F +
Sbjct: 182 AHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDT 240
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ V+ T LI+MY KCG +A +VF +MK +D V WN ++ +NG A ++ +L+
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLD 300
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
G + TFV +L C+ + +GR +S L + +V++ + G L
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGR-LVHSHILERGLDSEVAVATALVNMYAKCGSL 359
Query: 386 DEAHELIKSMPMEPNAIVWGALLAG 410
+EA ++ +M +A+ W L+
Sbjct: 360 EEARKVFNAMK-NRDAVAWSTLIGA 383
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 152/286 (53%), Gaps = 9/286 (3%)
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
+PD+ + + VL +C+ GD+ + +H + + R+ V +L+ +Y KC ++ AR
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 188 VFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
VF+ M ++++VSW++MI YA NG EAL +++ M + L ++ T V VL AC+SL
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
G + + + S L L+ MYA+ G + A ++F+ ++ +D+ WNAV+
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
S +G A +F ++ KC ++PN T++ ++ G + ++ EGR+ +
Sbjct: 181 LAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
T ++ ++++ G+ G EA E+ M + + + W ++ GC
Sbjct: 240 TDLVVATA-LINMYGKCGSSHEAREVFDKMK-KRDMVSWNVMI-GC 282
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 118/250 (47%), Gaps = 13/250 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI +V N C A++ + M G P TF VL+ACA H+ I ++
Sbjct: 414 MITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISES 473
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L+ + V +L+N+Y CG L +A ++F +K VVSWTA+++ + G EA+++F
Sbjct: 474 ELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLF 533
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH----GYVNEAGKGRNVFVATSLVDL 175
+ + G+KPD + +L CT G L W + ++ + F A +VDL
Sbjct: 534 QEMDLEGVKPDDVTYTSILFVCTHGGSLEQG-WRYFTDMAELHALAPTADHFAA--MVDL 590
Query: 176 YAKCGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQRENLKPE 231
+ G + A+ + + MP E D V+W + + +G + A + Y + + P
Sbjct: 591 LGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP- 649
Query: 232 YYTMVGVLSA 241
Y M + +A
Sbjct: 650 YIAMSNIYAA 659
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/606 (39%), Positives = 351/606 (57%), Gaps = 34/606 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+R + + AI+ Y M+ G NFT+PFVLK CA E G H +V+ G
Sbjct: 103 MLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTG 162
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV+ +L+++Y CG + DA +VFD + ++VV WTA+I+ Y +A+ +FR
Sbjct: 163 FGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFR 222
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G D + + V +A QLGD A
Sbjct: 223 KMQEEGFLGDEITAISVASAVGQLGDGRMA------------------------------ 252
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +AR VFD+M E++ +SW+SM+ GY NG P +AL +F MQ P T + ++S
Sbjct: 253 -ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVS 311
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR--EMKDKDQ 298
AC+ LG+ LG +F+ ++ + L ++DMY KCG + A ++F E+ ++D
Sbjct: 312 ACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDV 371
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WN ++SG ++G+ K A +F +++ G++PN TF +L C+HAGL+DEGR+ F
Sbjct: 372 SSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFAD 431
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M+++ S+ P ++HY CMVD+LGR+G L+EA LIK +P P+ VWGALL CR+H T+
Sbjct: 432 MTKL-SVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTE 490
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E N L LEP ++G YVL+SNIY+AS+KW + +R M +G++K S +E
Sbjct: 491 LGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFG 550
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F D S P ++Y K++ LA ++K G+VP VL D+E E+K++ L HSE
Sbjct: 551 TEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSE 610
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA+AFG++ I++ KNLRVC DCH A K IS I GR+IIVRD NRFH F G C
Sbjct: 611 KLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRC 670
Query: 599 SCKDFW 604
SC D+W
Sbjct: 671 SCGDYW 676
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 142/313 (45%), Gaps = 32/313 (10%)
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNV--FVATSLVDLYAKCGNMEKARRVFD---- 190
+L CT L +T K IH ++ G + F+A L+ LY+K G++ AR +FD
Sbjct: 31 LLQCCTSL---TTLKLIHSSLSTRGFLLHTPHFLA-RLIILYSKLGDLHSARTLFDHRHH 86
Query: 191 ------QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
Q P + + +M++ YA+ G EA+D++ MQR + +T VL CAS
Sbjct: 87 HHHGHTQAPNSFLCN--TMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS 144
Query: 245 -LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
LGA+ G + R F S+ + L+DMYAKCG + A +VF M +D V W A
Sbjct: 145 ELGAV-FGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTA 203
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++ A +F ++++ G + T + + + G + +GR + VF
Sbjct: 204 MITLYEQAERPLKALMLFRKMQEEGFLGDEITAISV---ASAVGQLGDGRMAISRARLVF 260
Query: 364 SLTPMIEHYG----CMVDLLGRSGQLDEAHELIKSMPM---EPNAIVWGALLAGCRLHKK 416
M E G M+ ++G+ +A L M +PN + +++ C
Sbjct: 261 D--RMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGS 318
Query: 417 TDLAEHVLNQLIA 429
L + N +I+
Sbjct: 319 KHLGRKLHNFVIS 331
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/612 (37%), Positives = 354/612 (57%), Gaps = 35/612 (5%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P ++ V + + +LG + H+ ++ GL V + ++ Y G + ++ V
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F+ I + + + + ++I Y G E + + + G D F+ VL + +L +
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD----------------- 190
K +HG + G +++VATSL+ LY KCG + A +VFD
Sbjct: 188 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 247
Query: 191 --------------QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN--LKPEYYT 234
+MP ++IVSW++MI GY+ +G ++AL +F M +E+ ++P + T
Sbjct: 248 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 307
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
++ VL ACA L LE G R SN + L MYAKCG + A F ++
Sbjct: 308 IMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLN 367
Query: 295 --DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
+K+ + WN +++ + G+ A F ++ + GIQP+ TF GLL GC+H+GLVD G
Sbjct: 368 RNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 427
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
++FN MS +S+ P +EHY C+ DLLGR+G+L EA +L+ MPM +WG+LLA CR
Sbjct: 428 LKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACR 487
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
H+ ++AE +L LEP N+GNYVLLSN+Y+ + +W + K+R+++ +G +K GC
Sbjct: 488 KHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGC 547
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF 532
SW+E++G H FL GD SHP ++IY L+ L K+KAAG+ P T +VL DI EEEK++
Sbjct: 548 SWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFN 607
Query: 533 LACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
L HSEKLA+AFG++ T + V+R+ KNLR+CGDCH A+ IS+I GRE+IVRD NRFH
Sbjct: 608 LIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHH 667
Query: 593 FIEGSCSCKDFW 604
F G CSC D+W
Sbjct: 668 FKGGCCSCGDYW 679
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 174/345 (50%), Gaps = 39/345 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR + + + Y SM + GF FTFPFVLK+ +G H LI++ G
Sbjct: 142 MIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIG 201
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDD------------------------------ 90
L D +V TSL+ LY CG + DA KVFD+
Sbjct: 202 LQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFE 261
Query: 91 -IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR--GLKPDSFSIVRVLTACTQLGDL 147
+P +N+VSWT +ISGY G ++A+++F ++ G++P+ +I+ VL AC QL L
Sbjct: 262 RMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTL 321
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM--PEKDIVSWSSMIQ 205
+ IH G N V +L +YAKCG++ AR FD++ EK++++W++MI
Sbjct: 322 ERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMIT 381
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
YAS G +A+ F M + ++P+ T G+LS C+ G +++G+ + M +
Sbjct: 382 AYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMS-TTYSI 440
Query: 266 NPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSG 307
NP + + D+ + GR+A+A K+ EM +W ++++
Sbjct: 441 NPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 485
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/628 (37%), Positives = 365/628 (58%), Gaps = 38/628 (6%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ + M+ + P + T+ V+ + G + H+ IV G D D V T+L+N
Sbjct: 192 ALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALIN 250
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG +A +VFD + +++VSW +I Y+ G+ EA+ ++++L G K +
Sbjct: 251 MYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKAT 310
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
V +L AC+ + L+ + +H ++ E G V VAT+LV++YAKCG++E+AR+VF+ M
Sbjct: 311 FVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK 370
Query: 194 EKDIVSWSSMIQGYASNGFPKEA----------------------------------LDM 219
+D V+WS++I YASNG+ K+A + +
Sbjct: 371 NRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKI 430
Query: 220 FYNMQ-RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
F M LKP+ T + VL ACASLG L + + +E SN V+ TLI+MYA
Sbjct: 431 FREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYA 490
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
+CG + +A ++F K+K V W A+V+ S G A +F +++ G++P+ T+
Sbjct: 491 RCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTS 550
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
+L CTH G +++G ++F M+ + L P +H+ MVDLLGRSG+L +A EL++SMP E
Sbjct: 551 ILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFE 610
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIR 458
P+ + W L CR+H K +L E ++ L+P ++ Y+ +SNIY+A W A +R
Sbjct: 611 PDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVR 670
Query: 459 SMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTD 518
M ++G++K+ G S++EVDG +HEF G HP +++I +L L ++AAG+VP T
Sbjct: 671 KKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTK 730
Query: 519 HVLFDIEEEEKQYFLACHSEKLALAFGLITT-APKDVIRIAKNLRVCGDCHEAIKLISKI 577
VL D+ E EK+ L HSEK+A+AFGL+++ + IR+ KNLRVC DCH A K I++I
Sbjct: 731 AVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARI 790
Query: 578 TGREIIVRDNNRFHCF-IEGSCSCKDFW 604
GR+II+RD NRFH F +G CSC D+W
Sbjct: 791 AGRDIILRDCNRFHRFSSDGKCSCGDYW 818
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 209/445 (46%), Gaps = 41/445 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + N A+ Y M +G + TF VL AC+ G H+ + +G
Sbjct: 81 MIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYSG 137
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + + +L+ +Y G + DA ++F + ++ SW A+I + G+ A+ +F+
Sbjct: 138 LDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFK 197
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +KP+S + + V++ + L + IH + G ++ VAT+L+++Y KCG
Sbjct: 198 EM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCG 256
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +AR VFD+M ++D+VSW+ MI Y NG EAL+++ + E K T V +L
Sbjct: 257 SSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILG 316
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+S+ AL G S + S + T L++MYAKCG + +A KVF MK++D V
Sbjct: 317 ACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVA 376
Query: 301 WNAVVSGLSMNGYVK----------------------------------VAFGVFGQLE- 325
W+ ++ + NGY K A +F ++
Sbjct: 377 WSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTG 436
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
G++P+ TF+ +L C G + E + +S L + ++++ R G L
Sbjct: 437 AAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISES-ELESNVVVTNTLINMYARCGSL 495
Query: 386 DEAHELIKSMPMEPNAIVWGALLAG 410
+EA L + E + W A++A
Sbjct: 496 EEAERLFAAAK-EKTVVSWTAMVAA 519
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 196/385 (50%), Gaps = 8/385 (2%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P N TF VL +C+ D G H I + + D V +L+++Y C L DA V
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 88 FD--DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
F+ D +NVVSW A+I+ Y G+ EA+ ++ R+ +GL D + V VL AC+
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS-- 122
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
L+ + IH V +G +A +LV +YA+ G++ A+R+F + +D SW+++I
Sbjct: 123 -LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
++ +G AL +F M + ++KP T + V+S ++ L G + + N F S
Sbjct: 182 AHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDS 240
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ V+ T LI+MY KCG +A +VF +MK +D V WN ++ NG A ++ +L+
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLD 300
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
G + TFV +L C+ + +GR +S L + +V++ + G L
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGR-LVHSHILERGLDSEVAVATALVNMYAKCGSL 359
Query: 386 DEAHELIKSMPMEPNAIVWGALLAG 410
+EA ++ +M +A+ W L+
Sbjct: 360 EEARKVFNAMK-NRDAVAWSTLIGA 383
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 154/287 (53%), Gaps = 11/287 (3%)
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
+PD+ + + VL +C+ GD++ + +H + + R+ V +L+ +Y KC ++ AR
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 188 VFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
VF+ M ++++VSW++MI YA NG EAL +++ M + L ++ T V VL AC+SL
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
G + + + S L L+ MYA+ G + A ++F+ ++ +D+ WNAV+
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFS 364
S +G A +F ++ KC ++PN T++ ++ G + ++ EGR+ + + F
Sbjct: 181 LAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
++ ++++ G+ G EA E+ M + + + W ++ GC
Sbjct: 240 SDLVVA--TALINMYGKCGSSHEAREVFDKMK-KRDMVSWNVMI-GC 282
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 21/254 (8%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI +V N C A++ + M G P TF VL+ACA H+ I ++
Sbjct: 414 MITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISES 473
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L+ + V +L+N+Y CG L +A ++F +K VVSWTA+++ + G EA+++F
Sbjct: 474 ELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLF 533
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW--------IHGYVNEAGKGRNVFVATS 171
+ + G+KPD + +L CT G L W +HG A + F A
Sbjct: 534 QEMDLEGVKPDDVTYTSILFVCTHGGSLEQG-WRYFTDMAELHGLAPTA----DHFAA-- 586
Query: 172 LVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
+VDL + G + A+ + + MP E D V+W + + +G + A + Y + +
Sbjct: 587 MVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSS 646
Query: 228 LKPEYYTMVGVLSA 241
P Y M + +A
Sbjct: 647 TAP-YIAMSNIYAA 659
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/614 (38%), Positives = 343/614 (55%), Gaps = 77/614 (12%)
Query: 22 RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYL 81
R L NFT PF LK QL H+ ++K + + ++
Sbjct: 16 RPSTHLLHNFTSPFELK--------QL----HAHLLKTNSPLSSLPLSRVASVCAFNSSF 63
Query: 82 ADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
+ A +F + V W + + + +AI++F RL + PD ++ VL AC
Sbjct: 64 SYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKAC 123
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV--- 198
++L D+ K +HGYV + G N+F+ +V LYA CG + AR+VFD+MP++D++
Sbjct: 124 SRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWN 183
Query: 199 ----------------------------SWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
SW+SMI GYA G KEA+D+F M+ L P
Sbjct: 184 IMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLP 243
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
T+V VL ACA +G L LG F R+ + N + TLIDMY KCG + AC++F
Sbjct: 244 NEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIF 303
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M+++ V W+A+++GL+ +G + A +F ++ G++PN TF+G+L C+H G+V+
Sbjct: 304 DNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVE 363
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+GR++F SM+R + + P IEHYGCMVDL R+G L EAHE I +MP+ PN +VWGALL G
Sbjct: 364 KGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
C++HK LAE L L+P N G YV+LSNIY+ + +W D A++R +M D+G
Sbjct: 424 CKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRG----- 478
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
+W ++L ++K G+VP T VL D+EE++K+
Sbjct: 479 --TW---------------------------EKLLQRMKLKGYVPNTSVVLLDMEEDQKE 509
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
FL HSEKLA+ FGLI T P VIRI KNLRVC DCH A+K+IS ++ REI+VRD NRF
Sbjct: 510 KFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRF 569
Query: 591 HCFIEGSCSCKDFW 604
HCF GSCSC D+W
Sbjct: 570 HCFKNGSCSCGDYW 583
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 186/358 (51%), Gaps = 33/358 (9%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
+R F D AI + +R P ++T FVLKAC+R D + G H + K GL
Sbjct: 85 LRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGL 144
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFD-------------------------------D 90
+ F++ +++LY CG + A KVFD +
Sbjct: 145 QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAE 204
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+P++NV SWT++I GY G +EAI++F + GL P+ ++V VL AC +G+L
Sbjct: 205 MPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLG 264
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+ IH + N +G +N+ V +L+D+Y KCG +E A R+FD M E+ +VSWS+MI G A++
Sbjct: 265 RRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAH 324
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
G ++AL +F M +KP T +G+L AC+ +G +E G + M R+ + +
Sbjct: 325 GRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEH 384
Query: 271 T-TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
++D++++ G + +A + M + VVW A++ G ++ VK+A L K
Sbjct: 385 YGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSK 442
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 154/326 (47%), Gaps = 36/326 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + AI+ + M + G LP T VL ACA + LG R H ++G
Sbjct: 216 MIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSG 275
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + V +L+++YV CG L DA ++FD++ ++ VVSW+A+I+G G E+A+ +F
Sbjct: 276 YEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFN 335
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++++ G+KP++ + + +L AC+ +G + KGR F + +
Sbjct: 336 KMINTGVKPNAVTFIGILHACSHMGMVE-------------KGRKYFASMT--------- 373
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
R + +P I + M+ ++ G +EA + NM + P +L
Sbjct: 374 ------RDYGIVPR--IEHYGCMVDLFSRAGLLQEAHEFIMNMP---IAPNGVVWGALLG 422
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C ++L A+ + + + L++ L ++YA+ GR +V + M+D+
Sbjct: 423 GCKVHKNVKLAEEATRHLSKLDPLNDGYY-VVLSNIYAEAGRWEDVARVRKLMRDRG--T 479
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEK 326
W ++ + + GYV V +E+
Sbjct: 480 WEKLLQRMKLKGYVPNTSVVLLDMEE 505
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/553 (40%), Positives = 342/553 (61%), Gaps = 2/553 (0%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG-LDCDEFVKTSLLNLYVHCGYLADA 84
+P + +LK C R + G H+ +V + LD ++ ++N+Y CG L DA
Sbjct: 83 LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDA 142
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
++FD++P K++V+WTA+I+G+ +A+ +F ++L GL+P+ F++ +L A
Sbjct: 143 RRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSE 202
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
L +H + + G +V+V ++LVD+YA+CG+M+ A+ FD MP K VSW+++I
Sbjct: 203 HGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALI 262
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G+A G + AL + + MQR+N +P ++T V SACAS+GALE G W + M ++
Sbjct: 263 SGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLK 322
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+G TL+DMYAK G + A +VF + D V WN +++G + +G K F Q+
Sbjct: 323 LIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQM 382
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ GI+PN +F+ +L C+H+GL+DEG +F M + + + P + HY VDLLGR G
Sbjct: 383 LRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGL 441
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
LD A I+ MP+EP A VWGALL CR+HK +L + + L+P +SG +LLSNI
Sbjct: 442 LDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNI 501
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+++ +W D AK+R MM + G++K CSWVE++ VH F+ D +HP ++I K +E+
Sbjct: 502 YASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEI 561
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
+ K+K G+VP T HVL ++++E++ L HSEKLALAF L+ T IRI KN+RVC
Sbjct: 562 SGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVC 621
Query: 565 GDCHEAIKLISKI 577
GDCH AIK +SKI
Sbjct: 622 GDCHAAIKFVSKI 634
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 181/333 (54%), Gaps = 3/333 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF N+ + A+ + M G P +FT +LKA EH G + H+ +K G
Sbjct: 160 LIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYG 219
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+V ++L+++Y CG++ A FD +P K+ VSW A+ISG+ +G E A+++
Sbjct: 220 YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLW 279
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + +P F+ V +AC +G L KW+H ++ ++G F+ +L+D+YAK G
Sbjct: 280 KMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAG 339
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A+RVFD++ + D+VSW++M+ G A +G KE LD F M R ++P + + VL+
Sbjct: 340 SIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLT 399
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQV 299
AC+ G L+ G++ M++ + + T +D+ + G + +A + REM +
Sbjct: 400 ACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAA 459
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
VW A++ M + + GV+ + P+
Sbjct: 460 VWGALLGACRM--HKNMELGVYAAERAFELDPH 490
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 177/318 (55%), Gaps = 12/318 (3%)
Query: 122 LLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS-LVDLYAKC 179
L+ RG L PD ++L CT+LG + + +H ++ ++ N V + +V++YAKC
Sbjct: 77 LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ ARR+FD+MP KD+V+W+++I G++ N P++AL +F M R L+P ++T+ +L
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLL 196
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A S L+ G +F + + S+ +G+ L+DMYA+CG M A F M K +V
Sbjct: 197 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG + G + A + ++++ QP T+ + C G +++G+ M
Sbjct: 257 SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHM 316
Query: 360 SRVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH---K 415
+ S +I G ++D+ ++G +D+A + + ++P+ + W +L GC H K
Sbjct: 317 --IKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHGLGK 373
Query: 416 KT-DLAEHVLNQLIALEP 432
+T D E +L I +EP
Sbjct: 374 ETLDRFEQMLR--IGIEP 389
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 121/254 (47%), Gaps = 18/254 (7%)
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP-VLGTTLI 274
ALD+ +QR +L P+Y +L C LG +E G + + + FL N VL ++
Sbjct: 74 ALDL---IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+MYAKCG + A ++F EM KD V W A+++G S N + A +F Q+ + G+QPN
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHF 190
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
T LL +D G Q ++ + + +VD+ R G +D A
Sbjct: 191 TLSSLLKASGSEHGLDPGTQ-LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWN-SGNYVLLSNIYSA------ 447
MP + + + W AL++G H + EH L+ L ++ N + S+++SA
Sbjct: 250 MPTK-SEVSWNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGA 305
Query: 448 --SHKWNDAAKIRS 459
KW A I+S
Sbjct: 306 LEQGKWVHAHMIKS 319
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/633 (38%), Positives = 376/633 (59%), Gaps = 57/633 (9%)
Query: 25 GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLY----VHCGY 80
G P + FP + C D + H++ +K+G D +L +H
Sbjct: 12 GNSPASSLFPQI-NTCRTIRDLS---QIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRD 67
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYI--NEGNLEEAINMFRRLLH-RGLKPDSFSIVRV 137
L A K+F+ +P +N SW II G+ +E AI +F ++ ++P+ F+ V
Sbjct: 68 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSV 127
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA------------ 185
L AC + G + K IHG + G G + FV ++LV +Y CG M+ A
Sbjct: 128 LKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIERE 187
Query: 186 ---------------------------------RRVFDQMPEKDIVSWSSMIQGYASNGF 212
R +FD+M ++ +VSW++MI GY+ NGF
Sbjct: 188 MVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGF 247
Query: 213 PKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
K+A+++F M++ E+++P Y T+V VL A + LG+LELG W + E + + VLG+
Sbjct: 248 FKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGS 307
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
LIDMY+KCG + +A VF + ++ + W+A+++G +++G A F ++ + G++P
Sbjct: 308 ALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 367
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ ++ LL C+HAGLV+EGR++F+ M V L P IEHYGCMVDLLGR G LDEA E
Sbjct: 368 SDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEF 427
Query: 392 IKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKW 451
I +MP++P+ ++W ALL CR+H+ ++ + V N L+ + P +SG YV LSN+Y++ W
Sbjct: 428 ILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 487
Query: 452 NDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAA 511
++ +++R M + I+K GCSW+++DGV+HEFLV D+SHP +++I S L E++ KL+ A
Sbjct: 488 SEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLA 547
Query: 512 GFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAI 571
G+ P T VL ++EEE+K+ L HSEK+A AFGLI+T+P IRI KNLR+C DCH +I
Sbjct: 548 GYRPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSI 607
Query: 572 KLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KLISK+ R+I VRD RFH F +GSCSC D+W
Sbjct: 608 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 159/300 (53%), Gaps = 49/300 (16%)
Query: 1 MIRGFVSNDCFQH--AIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIV 57
+IRGF +D + AI + M ++ F+ P FTFP VLKACA+ Q G + H L +
Sbjct: 89 IIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLAL 148
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADAL-------------------------------- 85
K G DEFV ++L+ +YV CG + DA
Sbjct: 149 KYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMI 208
Query: 86 -------------KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDS 131
+FD + ++VVSW +ISGY G ++A+ +FR + ++P+
Sbjct: 209 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNY 268
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++V VL A ++LG L +W+H Y ++G + + ++L+D+Y+KCG +EKA VF++
Sbjct: 269 VTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFER 328
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+P +++++WS+MI G+A +G +A+D F M++ ++P + +L+AC+ G +E G
Sbjct: 329 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEG 388
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 153/356 (42%), Gaps = 66/356 (18%)
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+N + L G + S+ + C + DLS IH ++G+ R+ A ++
Sbjct: 1 MNPTQTLYSPGGNSPASSLFPQINTCRTIRDLSQ---IHAVFIKSGQIRDTLAAAEILRF 57
Query: 176 YAKCG----NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE--ALDMFYNMQR-ENL 228
A +++ A ++F+QMP+++ SW+++I+G++ + K A+ +F M E +
Sbjct: 58 CATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFI 117
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC- 287
+P +T VL ACA G ++ G + F + + + L+ MY CG M AC
Sbjct: 118 EPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACV 177
Query: 288 --------------------------------------------KVFREMKDKDQVVWNA 303
+F +M+ + V WN
Sbjct: 178 LFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNT 237
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQFF----NS 358
++SG S NG+ K A VF +++K I+PN T V +L + G ++ G +S
Sbjct: 238 MISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDS 297
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R+ + ++D+ + G +++A + + +P E N I W A++ G +H
Sbjct: 298 GIRIDDVLG-----SALIDMYSKCGIIEKAIMVFERLPRE-NVITWSAMINGFAIH 347
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+ N F+ A+E + M+ E P T VL A +R +LG H +
Sbjct: 238 MISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDS 297
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G+ D+ + ++L+++Y CG + A+ VF+ +P +NV++W+A+I+G+ G +AI+ F
Sbjct: 298 GIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCF 357
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G++P + + +LTAC+
Sbjct: 358 CKMRQAGVRPSDVAYINLLTACSH-----------------------------------A 382
Query: 180 GNMEKARRVFDQMPEKD-----IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
G +E+ RR F QM D I + M+ G EA + NM +KP+
Sbjct: 383 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMP---IKPDDVI 439
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+L AC +E+G ++ + + + L +MYA G ++ ++ MK
Sbjct: 440 WKALLGACRMHRNVEMGKRVANIL-MDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 498
Query: 295 DKD 297
+ D
Sbjct: 499 EMD 501
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/552 (42%), Positives = 340/552 (61%), Gaps = 34/552 (6%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++ YV G +++A KVFD +P++NVVSWTA+I GY+ EG +EEA +F R+ R
Sbjct: 31 LVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERN---- 86
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK------GRNVFVATSLVDLYAKCGNMEK 184
V++ LG L G V+EA + ++V +T+++D G + +
Sbjct: 87 ------VVSWTVMLGGLIE----DGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIE 136
Query: 185 ARRVFDQMPEKDIVSWSSMIQG-------------YASNGFPKEALDMFYNMQRENLKPE 231
AR +FD+MP++++V+W+SMI G Y GF EAL +F MQRE ++P
Sbjct: 137 AREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPS 196
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
+ +++ VLS C SL +L+ G S + R++F + + + LI MY KCG + A +VF
Sbjct: 197 FPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFD 256
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
KD V+WN++++G + +G+ + A VF + I P+ TF+G+L C++ G V E
Sbjct: 257 RFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKE 316
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G + F SM + + P EHY CMVDLLGR+G+L+EA LI++MP+E +AIVWGALL C
Sbjct: 317 GLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGAC 376
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
R HK DLAE +L+ LEP N+G Y+LLSN+YS+ +W D ++R M K ++K G
Sbjct: 377 RTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPG 436
Query: 472 CSWVEVDGVVHEFL-VGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
CSW+EVD VH F G SHP E I KL +L L+ AG+ P V+ D++EEEK
Sbjct: 437 CSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKV 496
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
+ L HSEKLA+A+GL+ IR+ KNLRVCGD H IKLI+++TGREII+RD NRF
Sbjct: 497 HSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRF 556
Query: 591 HCFIEGSCSCKD 602
H F +G CSC D
Sbjct: 557 HHFKDGLCSCSD 568
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 149/258 (57%), Gaps = 17/258 (6%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR-- 121
D T++++ G L +A ++FD++P +NVV+WT++ISG ++G I ++ R
Sbjct: 117 DVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKG 176
Query: 122 ----------LLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
L+ R G++P S++ VL+ C L L + +H + + +++V++
Sbjct: 177 FELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSS 236
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
L+ +Y KCG++ A+RVFD+ KDIV W+S+I GYA +GF ++AL++F++M ++ P
Sbjct: 237 VLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAP 296
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACK 288
+ T +GVLSAC+ G ++ G+ M ++++ +P ++D+ + G++ +A
Sbjct: 297 DEITFIGVLSACSYTGKVKEGLEIFESM-KSKYQVDPKTEHYACMVDLLGRAGKLNEAMN 355
Query: 289 VFREMK-DKDQVVWNAVV 305
+ M + D +VW A++
Sbjct: 356 LIENMPVEADAIVWGALL 373
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+ ++ M+ EG P+ + VL C G + HS +V++ D D +V + L+
Sbjct: 180 EALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLI 239
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
+Y+ CG L A +VFD K++V W +II+GY G E+A+ +F + + PD
Sbjct: 240 TMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEI 299
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS-----LVDLYAKCGNMEKARR 187
+ + VL+AC+ G + I E+ K + + +VDL + G + +A
Sbjct: 300 TFIGVLSACSYTGKVKEGLEIF----ESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMN 355
Query: 188 VFDQMP-EKDIVSWSSMI 204
+ + MP E D + W +++
Sbjct: 356 LIENMPVEADAIVWGALL 373
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 134/283 (47%), Gaps = 33/283 (11%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
N LV Y + G + +AR+VFD+MPE+++VSW++MI+GY G +EA +F+ M
Sbjct: 24 NTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMP 83
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP----VLGTTLIDMYAKC 280
N+ + M+G G +E G + R F P V T +ID
Sbjct: 84 ERNV-VSWTVMLG--------GLIEDGRVDEA---RQLFDMMPVKDVVASTNMIDGLCSE 131
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNG----YVKV---------AFGVFGQLEKC 327
GR+ +A ++F EM ++ V W +++SG +G +K+ A +F +++
Sbjct: 132 GRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQRE 191
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLD 386
G++P+ + + +L C +D GRQ + + R F + + ++ + + G L
Sbjct: 192 GVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVS--SVLITMYIKCGDLV 249
Query: 387 EAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
A + + + ++W +++AG H + A V + + +
Sbjct: 250 TAKRVFDRFSSK-DIVMWNSIIAGYAQHGFGEKALEVFHDMFS 291
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 53/209 (25%)
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
+ GY N P+EA +F M PE
Sbjct: 1 MAGYFQNKRPREARKLFDKM------PE-------------------------------- 22
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+N + L+ Y + G +++A KVF +M +++ V W A++ G G ++ A +F +
Sbjct: 23 -TNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWR 81
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM--SRVFSLTPMIEHYGCMVDLLGR 381
+ + N ++ +L G G VDE RQ F+ M V + T MI D L
Sbjct: 82 MP----ERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMI-------DGLCS 130
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G+L EA E+ MP + N + W ++++G
Sbjct: 131 EGRLIEAREIFDEMP-QRNVVAWTSMISG 158
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/680 (35%), Positives = 370/680 (54%), Gaps = 80/680 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLG--VRSHSLIV 57
M+ F A+ ++++ G L P +++F ++ A + H+ + H ++
Sbjct: 133 MMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVL 192
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLA---DALKVFDDIPDKNVVSWT-------------- 100
K+G V +L+ LY+ C DA KV D++PDK+ ++WT
Sbjct: 193 KSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNA 252
Query: 101 -----------------AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A+ISGY+ G +A +FRR++ + D F+ VL+AC
Sbjct: 253 ARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACAN 312
Query: 144 LGDLSTAKWIHG--------YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
G K +HG +V EA + V +LV LY+K G + A+R+FD M K
Sbjct: 313 AGFFVHGKSVHGQIIRLQPNFVPEAA----LPVNNALVTLYSKGGKIVIAKRIFDTMNLK 368
Query: 196 DIVSWSS-------------------------------MIQGYASNGFPKEALDMFYNMQ 224
D+VSW++ M+ GY G ++AL +F M+
Sbjct: 369 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 428
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
E++KP YT G ++AC LGAL+ G + + + F ++ G L+ MYAKCG +
Sbjct: 429 AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVN 488
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A VF M + D V WNA++S L +G+ + A +F Q+ GI P+ +F+ +L C
Sbjct: 489 DARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN 548
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
HAGLVDEG +F SM R F ++P +HY ++DLLGRSG++ EA +LIK+MP EP +W
Sbjct: 549 HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIW 608
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
A+L+GCR + + + +QL + P + G Y+LLSN YSA+ +W DAA++R +M D+
Sbjct: 609 EAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDR 668
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
G++K GCSW+EV +H FLVGD HP ++++Y L+ + +++ G+VP T VL D+
Sbjct: 669 GVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDM 728
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
E EK+Y L HSEKLA+ FGL+ P + + KNLR+CGDCH A+ +SK GREI+V
Sbjct: 729 EPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVV 788
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD RFH F +G CSC ++W
Sbjct: 789 RDVRRFHHFKDGECSCGNYW 808
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 168/379 (44%), Gaps = 48/379 (12%)
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLE 113
+ ++ D TSL+ + G L DA FD +P ++ V A++S +
Sbjct: 85 LFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAA 144
Query: 114 EAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTA--KWIHGYVNEAGKGRNVFVAT 170
A+++F LL G L+PD +S +++A Q+ +L+ +H V ++G + V+
Sbjct: 145 PAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSN 204
Query: 171 SLVDLYAKCGNMEK---ARRVFDQMPEKDIVSWSSM------------------------ 203
+L+ LY KC E AR+V D+MP+KD ++W++M
Sbjct: 205 ALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKF 264
Query: 204 -------IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG--VWA 254
I GY +G +A ++F M E + + +T VLSACA+ G G V
Sbjct: 265 DVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHG 324
Query: 255 SSFMERNEFLSNPVL--GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ F+ L L+ +Y+K G++ A ++F M KD V WN ++SG +G
Sbjct: 325 QIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSG 384
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ A VF K N +++ ++ G H GL ++ + FN M R + P Y
Sbjct: 385 CLDKAVEVF----KVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQM-RAEDVKPCDYTY 439
Query: 373 GCMVDLLGRSGQLDEAHEL 391
+ G G L +L
Sbjct: 440 AGAIAACGELGALKHGRQL 458
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/541 (41%), Positives = 342/541 (63%), Gaps = 8/541 (1%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
DE ++++ Y G L +A ++F++ P ++V +WTA++SGY+ G L+EA RR+
Sbjct: 234 DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEA----RRVF 289
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
+ +S S ++ Q + A+ + EA +NV +++ YA+ G++
Sbjct: 290 DGMPEKNSVSWNAIIAGYVQCKRMDQARELF----EAMPCQNVSSWNTMITGYAQNGDIA 345
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
+AR FD+MP++D +SW+++I GYA +G+ +EAL +F M+R+ + T LS CA
Sbjct: 346 QARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCA 405
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+ ALELG + + S +G L+ MY KCG + A VF +++K+ V WN
Sbjct: 406 EIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNT 465
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++G + +G+ K A +F ++K GI P+ T VG+L C+H GLVD+G ++F SM++ +
Sbjct: 466 MIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDY 525
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+T +HY CM+DLLGR+G+LD+A L+K+MP EP+A WGALL R+H T+L E
Sbjct: 526 GITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKA 585
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
+ +EP NSG YVLLSN+Y+AS +W D ++R M D+G++K+ G SWVEV +H
Sbjct: 586 AKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHT 645
Query: 484 FLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALA 543
F VGD+ HP ++IY+ L+EL K+K G+V +T VL D+EEEEK + L HSEKLA+A
Sbjct: 646 FTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVA 705
Query: 544 FGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
FG++ IR+ KNLRVC DCH A+K ISKI GR II+RD++RFH F G CSC D+
Sbjct: 706 FGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDY 765
Query: 604 W 604
W
Sbjct: 766 W 766
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 5/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + + A+ + M+ +G TF L CA +LG + H +VKAG
Sbjct: 365 IIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAG 424
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ +V +LL +Y CG + DA VF+ I +K VVSW +I+GY G +EA+ +F
Sbjct: 425 LESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFE 484
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ PD ++V VL+AC+ G + ++ + + G N T ++DL +
Sbjct: 485 SMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRA 544
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
G ++ A+ + MP E D +W +++ +G ++A M + M+ +N
Sbjct: 545 GRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDN 596
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 171/360 (47%), Gaps = 35/360 (9%)
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
++ G AL++F+ +P ++ +SW A+ISG ++ A +F ++ R D S
Sbjct: 59 HMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTR----DLVSW 114
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
+++ C + +L A+ + + E R+V +++ YA+ G +++A+ +FD+MP
Sbjct: 115 NVMISGCVRYRNLRAARLLFDQMPE----RDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC 170
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
K+ +SW+ M+ Y NG ++A +F + L M G + + A G++
Sbjct: 171 KNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDA--RGIF- 227
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
ER+E N T+I YA+ G + +A ++F E +D W A+VSG NG +
Sbjct: 228 DRMPERDEVSWN-----TMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGML 282
Query: 315 KVAFGVF-GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM--SRVFSLTPMIEH 371
A VF G EK + N ++ G +D+ R+ F +M V S MI
Sbjct: 283 DEARRVFDGMPEKNSVSWN-----AIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITG 337
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
Y ++G + +A MP + ++I W A++AG + ++ E L+ + ++
Sbjct: 338 Y-------AQNGDIAQARNFFDRMP-QRDSISWAAIIAG---YAQSGYGEEALHLFVEMK 386
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 155/319 (48%), Gaps = 28/319 (8%)
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
D ++V W I+ ++ G + A+ +F + R S S +++ C A+
Sbjct: 46 DADIVKWNIAITNHMRNGQCDSALRLFNSMPRRS----SISWNAMISGCLSNDKFYLARQ 101
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+ E R++ ++ + N+ AR +FDQMPE+D+VSW++M+ GYA NG+
Sbjct: 102 LF----EKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGY 157
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS-NPVLGT 271
KEA ++F M +N + G+L+A G +E E +S N ++G
Sbjct: 158 VKEAKEIFDEMPCKN----SISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGG 213
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
Y K R+ A +F M ++D+V WN ++SG + NG + A +F E+ ++
Sbjct: 214 -----YVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF---EESPVR- 264
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ T+ ++ G G++DE R+ F+ M S++ + ++ + ++D+A EL
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQAREL 319
Query: 392 IKSMPMEPNAIVWGALLAG 410
++MP + N W ++ G
Sbjct: 320 FEAMPCQ-NVSSWNTMITG 337
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/541 (41%), Positives = 339/541 (62%), Gaps = 8/541 (1%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D ++++ Y G L+ A ++FD+ P ++V +WTA++SGY+ G L+EA F +
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
+ + S ++ Q + A+ + E+ RN+ +++ Y + G++
Sbjct: 294 EK----NEVSYNAMIAGYVQTKKMDIARELF----ESMPCRNISSWNTMITGYGQIGDIA 345
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
+AR+ FD MP++D VSW+++I GYA +G +EAL+MF ++++ T LS CA
Sbjct: 346 QARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+ ALELG + + + +G L+ MY KCG + +A F +++KD V WN
Sbjct: 406 DIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNT 465
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++G + +G+ + A VF ++ G++P+ T VG+L C+H GL+D G ++F SM++ +
Sbjct: 466 MLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDY 525
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ P +HY CM+DLLGR+G+L+EA +LI++MP +P A WGALL R+H T+L E
Sbjct: 526 GVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKA 585
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
+ +EP NSG YVLLSN+Y+AS +W DA K+RS M D G+QK+ G SWVEV +H
Sbjct: 586 AEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHT 645
Query: 484 FLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALA 543
F VGD SHP E+IY+ L+EL K++ G+V T VL D+EEEEK++ L HSEKLA+A
Sbjct: 646 FSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVA 705
Query: 544 FGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
FG++T IR+ KNLRVC DCH AIK ISKI GR II+RD++RFH F EG CSC D+
Sbjct: 706 FGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDY 765
Query: 604 W 604
W
Sbjct: 766 W 766
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 187/423 (44%), Gaps = 44/423 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G++ N F A ++ M N ++ C +LG +
Sbjct: 86 MISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNC------RLGDARRLFDLMPE 139
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + SLL+ Y GY+ +A +VFD++P+KN +SW +++ Y++ G +EEA +F
Sbjct: 140 KDVVSW--NSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF- 196
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
D S ++ + L A+W+ + R+ +++ YA+ G
Sbjct: 197 ---ESKSDWDLISWNCLMGGFVRKKKLGDARWLF----DKMPVRDAISWNTMISGYAQGG 249
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +ARR+FD+ P +D+ +W++M+ GY NG EA F M +N + Y M+
Sbjct: 250 GLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN-EVSYNAMIAGYV 308
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG----TTLIDMYAKCGRMAQACKVFREMKDK 296
+ + R F S P T+I Y + G +AQA K F M +
Sbjct: 309 QTKKMD-----------IARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQR 357
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
D V W A+++G + +G+ + A +F ++++ G N TF L C ++ G+Q
Sbjct: 358 DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIH 417
Query: 357 NSMSRVFSLTPMIEHYGCMVD-----LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
++ T GC V + + G +DEA++ + + E + + W +LAG
Sbjct: 418 GQAVKMGYGT------GCFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGY 470
Query: 412 RLH 414
H
Sbjct: 471 ARH 473
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 173/370 (46%), Gaps = 29/370 (7%)
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
D D ++ ++ G+ AL VF+ +P ++ VS+ A+ISGY+ A N+F +
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ R D FS +LT + L A+ + + E ++V SL+ YA+ G
Sbjct: 106 MPER----DLFSWNVMLTGYVRNCRLGDARRLFDLMPE----KDVVSWNSLLSGYAQNGY 157
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+++AR VFD MPEK+ +SW+ ++ Y NG +EA +F + +L + ++G
Sbjct: 158 VDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL-ISWNCLMGGFVR 216
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
LG W M + + + T+I YA+ G ++QA ++F E +D W
Sbjct: 217 KKKLGDAR---WLFDKMP----VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTW 269
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
A+VSG NG + A F ++ + N ++ ++ G +D R+ F SM
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMP- 324
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
I + M+ G+ G + +A + MP + + + W A++AG + ++ E
Sbjct: 325 ----CRNISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAG---YAQSGHYE 376
Query: 422 HVLNQLIALE 431
LN + ++
Sbjct: 377 EALNMFVEIK 386
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 115/232 (49%), Gaps = 5/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + ++ A+ + ++ +G TF L CA +LG + H VK G
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
FV +LL +Y CG + +A F+ I +K+VVSW +++GY G +A+ +F
Sbjct: 425 YGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFE 484
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+KPD ++V VL+AC+ G L ++ + + G T ++DL +
Sbjct: 485 SMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRA 544
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
G +E+A+ + MP + SW +++ +G ++A +M + M+ +N
Sbjct: 545 GRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQN 596
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 18/220 (8%)
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
++ + DI+ W+ I + NG AL +F M R + + G L A L
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
ER+ F N ++ Y + R+ A ++F M +KD V WN+++SG +
Sbjct: 103 ---FDQMPERDLFSWN-----VMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQ 154
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
NGYV A VF + + N ++ GLL H G ++E F S S ++
Sbjct: 155 NGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLIS---- 206
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ C++ R +L +A L MP+ +AI W +++G
Sbjct: 207 -WNCLMGGFVRKKKLGDARWLFDKMPVR-DAISWNTMISG 244
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/577 (39%), Positives = 352/577 (61%), Gaps = 1/577 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + TF L ACAR D G AG D FV +S+LNLY CG + DA+KV
Sbjct: 101 PDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKV 160
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD + ++ V+W+ +++G++N G +AI M+ R+ GL+ D IV V+ AC GD
Sbjct: 161 FDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDA 220
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+HGY+ +V ++TSLVD+YAK G ++ARRVF+ MP ++ VSWS++I
Sbjct: 221 RMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQL 280
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A G EAL +F MQ L P +VG L AC+ LG L+LG F+ R L +
Sbjct: 281 AQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLEL-DR 339
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
++GT +IDMY+KCG ++ A +F ++ +D + WN +++ +G + A +F ++++
Sbjct: 340 MVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRN 399
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
++P+ TF LL +H+GLV+EG+ +FN M + + P +H C+VDLL RSG ++E
Sbjct: 400 EVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEE 459
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A+ L+ S+ +P + ALL+GC + K +L E +++ L+P + G L+SN+Y+A
Sbjct: 460 ANGLVASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAA 519
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ W ++R +M D G +K GCS +E+ G +H F++ D SHP +I + +L ++
Sbjct: 520 AKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSE 579
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
++ G++P T+ V D+EE K+ L+ HSE+LA AFGL+ T+P + + KNLRVCGDC
Sbjct: 580 MRKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDC 639
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H+AIK +SKI REI+VRD RFH F +G+CSC D+W
Sbjct: 640 HDAIKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 197/364 (54%), Gaps = 6/364 (1%)
Query: 55 LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK--NVVSWTAIISGYINEGNL 112
LIV + C + + L Y G LA A P ++ +W A+++ + +
Sbjct: 26 LIVSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASP 85
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
EA+ +FR L +PDS + L+AC +LGDL+T + + + AG G ++FV +S+
Sbjct: 86 HEALRVFR-ALPPAARPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSV 144
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
++LYAKCG M+ A +VFD+M ++D V+WS+M+ G+ + G P +A++M+ M+R+ L+ +
Sbjct: 145 LNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADE 204
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+VGV+ ACA+ G +G ++ R+ + V+ T+L+DMYAK G QA +VF
Sbjct: 205 VVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFEL 264
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M ++ V W+A++S L+ G A G+F ++ G+ PN VG L C+ GL+ G
Sbjct: 265 MPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLG 324
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+ + R L M+ ++D+ + G L A L + + + I W ++A C
Sbjct: 325 KSIHGFILRTLELDRMVG--TAVIDMYSKCGSLSSAQMLFDKV-VSRDLISWNVMIACCG 381
Query: 413 LHKK 416
H +
Sbjct: 382 AHGR 385
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 172/311 (55%), Gaps = 7/311 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GFV+ AIE Y MR +G V++ACA D ++G H +++
Sbjct: 175 MVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHA 234
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D + TSL+++Y G A +VF+ +P +N VSW+A+IS GN +EA+ +FR
Sbjct: 235 MQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFR 294
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GL P+S +V L AC+ LG L K IHG++ + + V T+++D+Y+KCG
Sbjct: 295 MMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLE-LDRMVGTAVIDMYSKCG 353
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+ +FD++ +D++SW+ MI ++G ++AL +F M+R ++P++ T +LS
Sbjct: 354 SLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLS 413
Query: 241 ACASLGALELG-VWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDKD 297
A + G +E G W + + NE+ P ++D+ A+ G + +A + + K
Sbjct: 414 ALSHSGLVEEGKFWFNCMV--NEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKP 471
Query: 298 QV-VWNAVVSG 307
+ + A++SG
Sbjct: 472 TISILVALLSG 482
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/541 (41%), Positives = 339/541 (62%), Gaps = 8/541 (1%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D ++++ Y G L+ A ++FD+ P ++V +WTA++SGY+ G L+EA F +
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
+ + S ++ Q + A+ + E+ RN+ +++ Y + G++
Sbjct: 294 EK----NEVSYNAMIAGYVQTKKMDIARELF----ESMPCRNISSWNTMITGYGQIGDIA 345
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
+AR+ FD MP++D VSW+++I GYA +G +EAL+MF ++++ T LS CA
Sbjct: 346 QARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+ ALELG + + + +G L+ MY KCG + +A F +++KD V WN
Sbjct: 406 DIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNT 465
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++G + +G+ + A VF ++ G++P+ T VG+L C+H GL+D G ++F SM++ +
Sbjct: 466 MLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDY 525
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ P +HY CM+DLLGR+G+L+EA +LI++MP +P A WGALL R+H T+L E
Sbjct: 526 GVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKA 585
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
+ +EP NSG YVLLSN+Y+AS +W DA K+RS M D G+QK+ G SWVEV +H
Sbjct: 586 AEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHT 645
Query: 484 FLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALA 543
F VGD SHP E+IY+ L+EL K++ G+V T VL D+EEEEK++ L HSEKLA+A
Sbjct: 646 FSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVA 705
Query: 544 FGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
FG++T IR+ KNLRVC DCH AIK ISKI GR II+RD++RFH F EG CSC D+
Sbjct: 706 FGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDY 765
Query: 604 W 604
W
Sbjct: 766 W 766
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 187/423 (44%), Gaps = 44/423 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G++ N F A ++ M N ++ C +LG +
Sbjct: 86 MISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNC------RLGDARRLFDLMPE 139
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + SLL+ Y GY+ +A +VFD++P+KN +SW +++ Y++ G +EEA +F
Sbjct: 140 KDVVSW--NSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF- 196
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
D S ++ + L A+W+ + R+ +++ YA+ G
Sbjct: 197 ---ESKSDWDLISWNCLMGGFVRKKKLGDARWLF----DKMPVRDAISWNTMISGYAQGG 249
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +ARR+FD+ P +D+ +W++M+ GY NG EA F M +N + Y M+
Sbjct: 250 GLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN-EVSYNAMIAGYV 308
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG----TTLIDMYAKCGRMAQACKVFREMKDK 296
+ + R F S P T+I Y + G +AQA K F M +
Sbjct: 309 QTKKMD-----------IARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQR 357
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
D V W A+++G + +G+ + A +F ++++ G N TF L C ++ G+Q
Sbjct: 358 DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIH 417
Query: 357 NSMSRVFSLTPMIEHYGCMVD-----LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
++ T GC V + + G +DEA++ + + E + + W +LAG
Sbjct: 418 GQAVKMGYGT------GCFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGY 470
Query: 412 RLH 414
H
Sbjct: 471 ARH 473
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 173/370 (46%), Gaps = 29/370 (7%)
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
D D ++ ++ G+ AL VF+ +P ++ VS+ A+ISGY+ A N+F +
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ R D FS +LT + L A+ + + E ++V SL+ YA+ G
Sbjct: 106 MPER----DLFSWNVMLTGYVRNCRLGDARRLFDLMPE----KDVVSWNSLLSGYAQNGY 157
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+++AR VFD MPEK+ +SW+ ++ Y NG +EA +F + +L + ++G
Sbjct: 158 VDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL-ISWNCLMGGFVR 216
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
LG W M + +S T+I YA+ G ++QA ++F E +D W
Sbjct: 217 KKKLGDAR---WLFDKMPVRDAIS----WNTMISGYAQGGGLSQARRLFDESPTRDVFTW 269
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
A+VSG NG + A F ++ + N ++ ++ G +D R+ F SM
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMP- 324
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
I + M+ G+ G + +A + MP + + + W A++AG + ++ E
Sbjct: 325 ----CRNISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAG---YAQSGHYE 376
Query: 422 HVLNQLIALE 431
LN + ++
Sbjct: 377 EALNMFVEIK 386
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 119/263 (45%), Gaps = 61/263 (23%)
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
+ GL+D G ++F M+ +S+TP +HY CM+DLLGR +L+E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
GALL R+H T+L E + P NSG S M D
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSG---------------------ISKMRDV 857
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
G+QK+ G SW EV +H F VG E I L+EL K++
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELDLKMREREEEKERT------ 910
Query: 525 EEEEKQYFLACHSEKLALAFGLITTA---PKDVIRIAKNLRVCGDCHEAIKLISKITGRE 581
L SE LA A G++T P V++ K + VC DC AIK +SKI GR
Sbjct: 911 --------LKYLSENLAAALGILTIPVGRPNRVMK--KRVYVCEDCRSAIKHMSKIVGRL 960
Query: 582 IIVRDNNRFHCFIEGSCSCKDFW 604
I +RD++RF+ E CSC ++W
Sbjct: 961 ITLRDSHRFN---ESICSCGEYW 980
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 115/232 (49%), Gaps = 5/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + ++ A+ + ++ +G TF L CA +LG + H VK G
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
FV +LL +Y CG + +A F+ I +K+VVSW +++GY G +A+ +F
Sbjct: 425 YGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFE 484
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+KPD ++V VL+AC+ G L ++ + + G T ++DL +
Sbjct: 485 SMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRA 544
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
G +E+A+ + MP + SW +++ +G ++A +M + M+ +N
Sbjct: 545 GRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQN 596
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 18/220 (8%)
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
++ + DI+ W+ I + NG AL +F M R + + G L A L
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
ER+ F N ++ Y + R+ A ++F M +KD V WN+++SG +
Sbjct: 103 ---FDQMPERDLFSWN-----VMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQ 154
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
NGYV A VF + + N ++ GLL H G ++E F S S ++
Sbjct: 155 NGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLIS---- 206
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ C++ R +L +A L MP+ +AI W +++G
Sbjct: 207 -WNCLMGGFVRKKKLGDARWLFDKMPVR-DAISWNTMISG 244
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/605 (37%), Positives = 358/605 (59%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G NDCF AI+ + M F P T VL A A ++ H V+ G
Sbjct: 93 LISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV+T+L+++Y G + A ++F+ + ++NVVSW AI+SGY + G EEAI++F
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFN 212
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +GL D ++I+ ++ A +G L IHG++ G + + T+L+D+Y
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGVL 239
++ A RVF +M KD+ +W+ M+ G++S A+ F M +NLK + ++G+L
Sbjct: 273 CVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGIL 332
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
S+C+ GAL+ G + + F +N +G+ +IDMYA CG + A + F M +KD V
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV 392
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA+++G MNGY A +F Q++ G+ P+ +TFV +L C+HAG+V EG Q F M
Sbjct: 393 CWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHM 452
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ P ++HY C++D+LGR+GQLD A+ I +MP +P+ V+ LL CR+H L
Sbjct: 453 VKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKL 512
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ ++ +EP ++G YVLLSN+Y+ + W R+ + K ++K G S +E++
Sbjct: 513 GHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQ 572
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
++ F+ G+ HP KI L L K+K AG+VP T+ +L D+ ++ K+ L HSEK
Sbjct: 573 EIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEK 632
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
+A+AFGL+ T P +IRI KNLR C DCH A K +SK+ GR ++++D NRFH F +G CS
Sbjct: 633 MAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCS 692
Query: 600 CKDFW 604
C+D+W
Sbjct: 693 CRDYW 697
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 223/402 (55%), Gaps = 12/402 (2%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ I+ +GL + F+ SL+N YV+CG LADA ++F P KNVVSWT +ISG
Sbjct: 44 HAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCF 103
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
EAI++FR + KP++ +I VL A LG + AK +H + G NVFV T+L
Sbjct: 104 VEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETAL 163
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
VD+Y+K G M AR++F+ M E+++VSW++++ GY+ +GF +EA+D+F M+R+ L ++
Sbjct: 164 VDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDF 223
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
YT++ ++ A S+G L++G F+ R + ++ + T L+D+Y + A +VF E
Sbjct: 224 YTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSE 283
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP---NGNTFVGLLCGCTHAGLV 349
M KD W +++G S + A F ++ GIQ + +G+L C+H+G +
Sbjct: 284 MFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM--LGIQNLKLDSIVLMGILSSCSHSGAL 341
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+GR+ ++++ I ++D+ G L++A M E + + W A++A
Sbjct: 342 QQGRR-VHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNAMIA 399
Query: 410 GCRLHKKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSASH 449
G ++ A + Q+ L+P S +S +Y+ SH
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDES---TFVSVLYACSH 438
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 152/308 (49%), Gaps = 4/308 (1%)
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
+L DL + IH + +G N F++ SL++ Y CG + A+++F P K++VSW+
Sbjct: 33 KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTI 92
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
+I G A N EA+D+F M N KP T+ VL A A+LG + + F R
Sbjct: 93 LISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
F N + T L+DMY+K G M A ++F M +++ V WNA+VSG S +G+ + A +F
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFN 212
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGR 381
+ + G+ + T + L+ G + G + R + I+ ++D+
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIK--TALMDIYVS 270
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+D+AH + M ++ A W +L G + D A N+++ ++ + VL+
Sbjct: 271 HNCVDDAHRVFSEMFVKDVA-AWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLM 329
Query: 442 SNIYSASH 449
+ S SH
Sbjct: 330 GILSSCSH 337
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/541 (41%), Positives = 342/541 (63%), Gaps = 8/541 (1%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
DE ++++ Y G L +A ++F++ P ++V +WTA++SGY+ G L+EA RR+
Sbjct: 153 DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEA----RRVF 208
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
+ +S S ++ Q + A+ + EA +NV +++ YA+ G++
Sbjct: 209 DGMPEKNSVSWNAIIAGYVQCKRMDQARELF----EAMPCQNVSSWNTMITGYAQNGDIA 264
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
+AR FD+MP++D +SW+++I GYA +G+ +EAL +F M+R+ + T LS CA
Sbjct: 265 QARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCA 324
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+ ALELG + + S +G L+ MY KCG + A VF +++K+ V WN
Sbjct: 325 EIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNT 384
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++G + +G+ K A +F ++K GI P+ T VG+L C+H GLVD+G ++F SM++ +
Sbjct: 385 MIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDY 444
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+T +HY CM+DLLGR+G+LD+A L+K+MP EP+A WGALL R+H T+L E
Sbjct: 445 GITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKA 504
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
+ +EP NSG YVLLSN+Y+AS +W D ++R M D+G++K+ G SWVEV +H
Sbjct: 505 AKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHT 564
Query: 484 FLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALA 543
F VGD+ HP ++IY+ L+EL K+K G+V +T VL D+EEEEK + L HSEKLA+A
Sbjct: 565 FTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVA 624
Query: 544 FGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
FG++ IR+ KNLRVC DCH A+K ISKI GR II+RD++RFH F G CSC D+
Sbjct: 625 FGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDY 684
Query: 604 W 604
W
Sbjct: 685 W 685
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 180/399 (45%), Gaps = 52/399 (13%)
Query: 48 LGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI 107
+ +RS L + A + D F++ L V L A +FD +P+++VVSW A++SGY
Sbjct: 14 MRLRSPPLQLHASPEFD-FLERHDLRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYA 72
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
G ++EA +F + + +S S +L A Q G + A+ + E+ +
Sbjct: 73 QNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDARRLF----ESKADWELI 124
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
++ Y K + AR +FD+MPE+D VSW++MI GYA NG EA +F E+
Sbjct: 125 SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF----EES 180
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFM-ERNEFLSNPVLG---------------- 270
+ +T ++S G L+ M E+N N ++
Sbjct: 181 PVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFE 240
Query: 271 ----------TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
T+I YA+ G +AQA F M +D + W A+++G + +GY + A +
Sbjct: 241 AMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHL 300
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD--- 377
F ++++ G + N +TF L C ++ G+Q + + + GC V
Sbjct: 301 FVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLES------GCYVGNAL 354
Query: 378 --LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + G +D+A+ + + + E + W ++AG H
Sbjct: 355 LVMYCKCGNIDDAYIVFEGIE-EKEVVSWNTMIAGYARH 392
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 5/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + + A+ + M+ +G TF L CA +LG + H +VKAG
Sbjct: 284 IIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAG 343
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ +V +LL +Y CG + DA VF+ I +K VVSW +I+GY G +EA+ +F
Sbjct: 344 LESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFE 403
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ PD ++V VL+AC+ G + ++ + + G N T ++DL +
Sbjct: 404 SMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRA 463
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
G ++ A+ + MP E D +W +++ +G ++A M + M+ +N
Sbjct: 464 GRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDN 515
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/641 (38%), Positives = 355/641 (55%), Gaps = 67/641 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ C A+E + M+ EG P FT+ VL+ C+ + G + H+ +K
Sbjct: 109 LISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQ 168
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMF 119
D + FV T L+++Y C + +A +F+ PDK N V WTA+++GY G+ +AI F
Sbjct: 169 FDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECF 228
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R + G++ + F+ +LTAC + +HG + +G G NVFV ++LVD+Y+KC
Sbjct: 229 RDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKC 288
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ ARR+ + M D VSW+SMI G G +EAL +F M ++K +
Sbjct: 289 GDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKID-------- 340
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
EF ++ L+DMYAK G A VF +M DKD +
Sbjct: 341 ----------------------EFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVI 378
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN-----------GNTFVGLL--CGC--- 343
W ++V+G NG + A +F ++ GI P+ N+ V + CGC
Sbjct: 379 SWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIED 438
Query: 344 --------------THAGLV------DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
T L+ GR +F SM V+ + P EHY CM+DLLGRSG
Sbjct: 439 ANKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSG 498
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
+L EA EL+ M ++P+A VW ALLA CR+H +L E N L LEP N+ YVLLSN
Sbjct: 499 KLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSN 558
Query: 444 IYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDE 503
+YSA+ KW +AAK R +M +G+ K GCSW+E+ VH F+ D SHP + +IYSK+DE
Sbjct: 559 LYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDE 618
Query: 504 LATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRV 563
+ +K AG+VP + L D++EE K+ LA HSEKLA+AFGL+T P IRI KNLR+
Sbjct: 619 IMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRI 678
Query: 564 CGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CGDCH A+K +S + R +I+RD+N FH F EG+CSC D+W
Sbjct: 679 CGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 141/292 (48%), Gaps = 17/292 (5%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGK---GRNVFVA---------TSLVDLYAKCGN 181
I R + +C + S + W+ +++ G+ R +F +++ YA G
Sbjct: 28 IRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGR 87
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ +AR++F + P + ++WSS+I GY G EAL++F+ MQ E +P +T VL
Sbjct: 88 LNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRV 147
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQVV 300
C+ LE G + + +F SN + T L+DMYAKC + +A +F DK + V+
Sbjct: 148 CSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVL 207
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A+V+G S NG A F + GI+ N TF +L C G Q +
Sbjct: 208 WTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIV 267
Query: 361 RV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
R F + +VD+ + G L A ++++M ++ + + W +++ GC
Sbjct: 268 RSGFGANVFVG--SALVDMYSKCGDLSNARRMLETMEVD-DPVSWNSMIVGC 316
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/568 (41%), Positives = 339/568 (59%), Gaps = 31/568 (5%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D +L++ YV G +++A ++FD +P ++VVSW ++SGY G++ EA RRL
Sbjct: 192 DAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEA----RRLF 247
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAK-------------W---IHGYV-----NEAGK 162
D F+ V++ Q G L A+ W + Y+ +EA +
Sbjct: 248 DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKE 307
Query: 163 ------GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
RNV +++ YA+ G +E+A+ VFD MP+KD VSW++M+ Y+ G +E
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
L +F M R VLS CA + ALE G+ + R + +G L+ M
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
Y KCG M A F EM+++D V WN +++G + +G+ K A +F + +P+ T
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
VG+L C+H+GLV++G +F SM F +T EHY CM+DLLGR+G+L EAH+L+K MP
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAK 456
EP++ +WGALL R+H+ +L ++ LEP N+G YVLLSNIY++S KW DA K
Sbjct: 548 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARK 607
Query: 457 IRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
+R MM ++G++K+ G SW+EV VH F GD HP EKIY+ L++L ++K AG+V
Sbjct: 608 MRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSA 667
Query: 517 TDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISK 576
TD VL D+EEEEK++ L HSEKLA+A+G++ P IR+ KNLRVCGDCH A K IS
Sbjct: 668 TDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISA 727
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I GR I++RD+NRFH F GSCSC D+W
Sbjct: 728 IEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 187/430 (43%), Gaps = 58/430 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ +N A + ++ P N+++ +L A A S SL G
Sbjct: 75 MLAGYSANGRLPLAASLFRAIPR----PDNYSYNTLLHALAV---------SSSLADARG 121
Query: 61 LDCDEFVKTS-----LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
L + V+ S +++ + + G ++ A FD P+K+ VSW +++ Y+ G +EEA
Sbjct: 122 LFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEA 181
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
R L + + D+ S +++ Q G +S A+ + + GR+V +V
Sbjct: 182 ----RGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRM----PGRDVVSWNIMVSG 233
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
YA+ G+M +ARR+FD P +D+ +W++++ GYA NG +EA +F M N
Sbjct: 234 YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERN-------- 285
Query: 236 VGVLSACASLGALELGVWASSFMERNEFL------SNPVLGTTLIDMYAKCGRMAQACKV 289
S A+ M+ + L N T++ YA+ G + +A V
Sbjct: 286 ------AVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAV 339
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F M KD V W A+++ S G + +F ++ +CG N + F +L C +
Sbjct: 340 FDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAAL 399
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVD-----LLGRSGQLDEAHELIKSMPMEPNAIVW 404
+ G Q + R GC V + + G +++A + M E + + W
Sbjct: 400 ECGMQLHGRLIRAGYGV------GCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVVSW 452
Query: 405 GALLAGCRLH 414
++AG H
Sbjct: 453 NTMIAGYARH 462
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 160/347 (46%), Gaps = 42/347 (12%)
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+ ++ G +ADA ++F +P ++ ++ A+++GY G L A ++FR + +PD+
Sbjct: 45 ITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI----PRPDN 100
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+S +L A L+ A+ G +E R+ ++ +A G + AR FD
Sbjct: 101 YSYNTLLHALAVSSSLADAR---GLFDEM-PVRDSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
PEKD VSW+ M+ Y NG +EA +F N + E+ + S AL G
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLF------NSRTEWDAI--------SWNALMSG 202
Query: 252 V--WASSFMERNEFLSNP----VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
W R F P V ++ YA+ G M +A ++F +D W AVV
Sbjct: 203 YVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVV 262
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS--RVF 363
SG + NG ++ A VF + + N ++ ++ ++DE ++ FN M V
Sbjct: 263 SGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA 318
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
S M+ Y ++G L+EA + +MP + +A+ W A+LA
Sbjct: 319 SWNTMLTGY-------AQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 5/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + C + ++ + M G F VL CA + G++ H +++AG
Sbjct: 354 MLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAG 413
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
FV +LL +Y CG + DA F+++ +++VVSW +I+GY G +EA+ +F
Sbjct: 414 YGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFD 473
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ KPD ++V VL AC+ G + + + ++ G T ++DL +
Sbjct: 474 MMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRA 533
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFP---KEALDMFYNMQREN 227
G + +A + MP E D W +++ + P + A + + ++ EN
Sbjct: 534 GRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPEN 585
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 128/302 (42%), Gaps = 49/302 (16%)
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
V + + + + G + A R+F MP + ++++M+ GY++NG A +F + R
Sbjct: 38 VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR 97
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT----TLIDMYAKCG 281
P+ Y+ +L A L V +S R F PV + +I +A G
Sbjct: 98 ----PDNYSYNTLLHA--------LAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHG 145
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
++ A F +KD V WN +++ NG V+ A G+F + + ++ L+
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEW----DAISWNALMS 201
Query: 342 GCTHAGLVDEGRQFFNSMS------------------------RVFSLTPM--IEHYGCM 375
G G + E R+ F+ M R+F P+ + + +
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAV 261
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEPW 433
V ++G L+EA + +MP E NA+ W A++A + D A+ + N + + W
Sbjct: 262 VSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASW 320
Query: 434 NS 435
N+
Sbjct: 321 NT 322
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/604 (39%), Positives = 349/604 (57%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + ND + A+ ++ MR G P F VLKA LG H VK
Sbjct: 222 MVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTL 281
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V +LL++Y CGY+ DA VF+ IP +V+ W+ +IS Y E+A MF
Sbjct: 282 CDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFL 341
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R++ + P+ FS+ VL AC + L + IH V + G +FV +L+D+YAKC
Sbjct: 342 RMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCR 401
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
NME + +F + + + VSW+++I GY +GF ++AL +F M+ ++ T VL
Sbjct: 402 NMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLR 461
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+ +++ V S +E++ F ++ ++ +LID YAKCG + A KVF + D V
Sbjct: 462 ACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVS 521
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++SG +++G A +F ++ K +PN TFV LL C GLV++G FNSM+
Sbjct: 522 WNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMT 581
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P ++HY C+V LLGR+G+L++A + I +P P+ +VW ALL+ C +HK L
Sbjct: 582 MDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALG 641
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ +++ +EP + YVLLSN+Y+A+ + A +R M + G++K G SWVE+ G
Sbjct: 642 KFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGE 701
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F VG HP I + L+ L K G+VP + VL D++EEEK L HSE+L
Sbjct: 702 VHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERL 761
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
ALA+GL T P IRI KNLR C DCH K+ISKI REI+VRD NRFH F EG CSC
Sbjct: 762 ALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSC 821
Query: 601 KDFW 604
D+W
Sbjct: 822 GDYW 825
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 220/428 (51%), Gaps = 4/428 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+++G+ F+ A + ++ EG +F +LK L H+ K G
Sbjct: 121 LVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLG 180
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + FV +SL++ Y CG ++ A VFD I K+ V+WTA++S Y E+A+N F
Sbjct: 181 HDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFS 240
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G KP+ F + VL A L K IHG + V +L+D+YAKCG
Sbjct: 241 KMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCG 300
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E AR VF+ +P D++ WS +I YA + ++A +MF M R ++ P +++ GVL
Sbjct: 301 YIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQ 360
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA++ L+LG + + + + S +G L+D+YAKC M + ++FR ++D ++V
Sbjct: 361 ACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVS 420
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN ++ G +G+ + A VF ++ + TF +L C + + Q + +
Sbjct: 421 WNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIE 480
Query: 361 R-VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ F+ ++ ++D + G + +A ++ +S+ ++ + + W A+++G LH +
Sbjct: 481 KSTFNNDTIV--CNSLIDTYAKCGCIRDALKVFESI-IQCDVVSWNAIISGYALHGRATD 537
Query: 420 AEHVLNQL 427
A + N++
Sbjct: 538 ALELFNRM 545
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 190/377 (50%), Gaps = 4/377 (1%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAG--LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD 93
+L+ C D + G H+ +V+ G D F LLNLY G LA A ++FD +P+
Sbjct: 53 LLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPE 112
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
+N+VS+ ++ GY G EEA +FRRL G + + F + +L + I
Sbjct: 113 RNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCI 172
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
H + G RN FV +SL+D Y+ CG + AR VFD + KD V+W++M+ Y+ N P
Sbjct: 173 HACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIP 232
Query: 214 KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
++AL+ F M+ KP + + VL A L + LG + + P +G L
Sbjct: 233 EDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGAL 292
Query: 274 IDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+DMYAKCG + A VF + D ++W+ ++S + + + AF +F ++ + + PN
Sbjct: 293 LDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNE 352
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
+ G+L C + +D G+Q N + ++ + + M D+ + ++ + E+ +
Sbjct: 353 FSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALM-DVYAKCRNMENSLEIFR 411
Query: 394 SMPMEPNAIVWGALLAG 410
S+ + N + W ++ G
Sbjct: 412 SL-RDANEVSWNTIIVG 427
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 145/287 (50%), Gaps = 10/287 (3%)
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG--KGRNVFVATSLVDLYAKCGNMEKA 185
K DS++ R+L C GD + +H V + G + F A L++LYAK G + A
Sbjct: 44 KLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAA 103
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
RR+FD MPE+++VS+ +++QGYA G +EA +F +QRE + ++ + +L ++
Sbjct: 104 RRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAM 163
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
A L + + N +G++LID Y+ CG ++ A VF + KD V W A+V
Sbjct: 164 DAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMV 223
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG--CTHAGLVDEGRQFFNSMSRVF 363
S S N + A F ++ G +PN +L C + ++ +G V
Sbjct: 224 SCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIH----GCAVK 279
Query: 364 SLTPMIEHY-GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+L H G ++D+ + G +++A + + +P + + I+W L++
Sbjct: 280 TLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHD-DVILWSFLIS 325
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/623 (37%), Positives = 357/623 (57%), Gaps = 64/623 (10%)
Query: 29 TNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALKV 87
+ FTF FV + CA L H+ ++ L V L+++Y G DA +
Sbjct: 101 SAFTFHFVFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRA 160
Query: 88 FDDIP-------------------------------DKNVVSWTAIISGYINEGNLEEAI 116
FD++P ++NVVSWT++I+GY G +A+
Sbjct: 161 FDEVPVKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAV 220
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
F +L G++PD +++ L+AC++L +L + +H V + + +L+D+Y
Sbjct: 221 YCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMY 280
Query: 177 AKCGNMEK--------------------------------ARRVFDQMPEKDIVSWSSMI 204
AKCG++ + AR +FDQM +D+++++SMI
Sbjct: 281 AKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMI 340
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GY +G ++AL +F ++R ++ + +T+V +L+ACASLGAL G + +E+
Sbjct: 341 TGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVE 400
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ L T L+DMY KCGR+ +A VF M ++D W+A+++GL+ NG A F Q+
Sbjct: 401 EDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQM 460
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
++ G QP T++ +L C+H+ L++EGRQ FN M + L P IEHYGCM+DLL RSG
Sbjct: 461 KRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGL 520
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
LDEA L+++MPM+PNA++W ++L+ CR+HK DLA H L+ L P YV L NI
Sbjct: 521 LDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNI 580
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y S +W +A +IR +M ++G++K G S + V G VH+F+V D SHP + +I + ++E+
Sbjct: 581 YIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVNDQSHPWTLEIITMMEEI 640
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
A +LK+AG+ P T + D++EEEK+ L HSEK+A+AFGLI+ P I I KNLRVC
Sbjct: 641 ARRLKSAGYSPATSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPNLPIHIMKNLRVC 700
Query: 565 GDCHEAIKLISKITGREIIVRDN 587
DCH AIKLIS++ REIIVRD
Sbjct: 701 EDCHSAIKLISQLWNREIIVRDR 723
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 180/352 (51%), Gaps = 36/352 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ A+ +N M ++G P L AC++ + + G H L+ K
Sbjct: 206 LIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKR 265
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDI-----PD---------------------- 93
+ + + +L+++Y CG +A A VFD + P+
Sbjct: 266 IQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLF 325
Query: 94 -----KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
++V+++ ++I+GYI+ G L +A+ +F +L G++ D+F++V +LTAC LG L
Sbjct: 326 DQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALP 385
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+ +H + + +V++ T+LVD+Y KCG +++A VF +M E+D+ +WS+MI G A
Sbjct: 386 QGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLA 445
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
NG +AL+ F M+R+ +P T + VL+AC+ L G + M R+ +P
Sbjct: 446 FNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEM-RSLHKLHPQ 504
Query: 269 LGT--TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
+ +ID+ A+ G + +A + + M + V+W +++S ++ + +A
Sbjct: 505 IEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLA 556
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/669 (36%), Positives = 367/669 (54%), Gaps = 84/669 (12%)
Query: 14 AIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRS----HSLIVKAGLDCDEFVK 68
A+ + S+ G L P +++F +L A H + VR ++K+G V
Sbjct: 140 AVAVFRSLLASGSLRPDDYSFTALLSAAG--HLPNISVRHCAQLQCSVLKSGAGGVLSVS 197
Query: 69 TSLLNLYVHCGYLA---DALKVFDDIPDKNVVSWT------------------------- 100
+L+ LY+ C L DA KV D++PDK+ ++WT
Sbjct: 198 NALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVK 257
Query: 101 ------AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
A+ISGY++ G + EA +FRR++ + D F+ VL+AC G + K +H
Sbjct: 258 FDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVH 317
Query: 155 G--------YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS---- 202
G +V EA + V +LV LY+KCGN+ ARR+FD M KD+VSW++
Sbjct: 318 GQITRLQPNFVPEAA----LPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSG 373
Query: 203 ---------------------------MIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
M+ GY GF ++AL +F M+ E++KP YT
Sbjct: 374 YVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTY 433
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
G +SAC LG+L+ G + + F + G LI MYA+CG + +A +F M +
Sbjct: 434 AGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPN 493
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
D V WNA++S L +G+ + A +F ++ GI P+ +F+ +L C H+GLVDEG Q+
Sbjct: 494 IDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQY 553
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F SM R F + P +HY ++DLLGR+G++ EA +LIK+MP EP +W A+L+GCR
Sbjct: 554 FESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSG 613
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
+L H +QL + P + G Y+LLSN YSA+ +W DAA++R +M D+G++K GCSW+
Sbjct: 614 DMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWI 673
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
E VH F+VGD HP + K+Y L+ + +++ G+VP T VL D+E +K++ L
Sbjct: 674 EAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFA 733
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSE+LA+ FGL+ P + + KNLR+C DCH + +SK GREI+VRD RFH F +
Sbjct: 734 HSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKD 793
Query: 596 GSCSCKDFW 604
G CSC ++W
Sbjct: 794 GECSCGNYW 802
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 184/395 (46%), Gaps = 47/395 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK-- 58
MI G+V + A E + M E FTF VL ACA F G H I +
Sbjct: 265 MISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQ 324
Query: 59 ------AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
A L V +L+ LY CG +A A ++FD++ K+VVSW I+SGY+ L
Sbjct: 325 PNFVPEAALP----VNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCL 380
Query: 113 -------------------------------EEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
E+A+ +F R+ +KP ++ ++AC
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISAC 440
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+LG L K +HG++ + G + +L+ +YA+CG +++A +F MP D VSW+
Sbjct: 441 GELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWN 500
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+MI +G +EAL++F M E + P+ + + VL+AC G ++ G M+R+
Sbjct: 501 AMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRD 560
Query: 262 -EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFG 319
+ T LID+ + GR+ +A + + M + +W A++SG +G +++
Sbjct: 561 FGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAH 620
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGL-VDEGR 353
QL K Q +G T++ L + AG VD R
Sbjct: 621 AADQLFKMTPQHDG-TYILLSNTYSAAGRWVDAAR 654
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 190/435 (43%), Gaps = 76/435 (17%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 126
TSL+ Y G L A+ FD +P ++ V A+IS Y + A+ +FR LL G
Sbjct: 92 TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 127 -LKPDSFSIVRVLTACTQLGDLST--AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
L+PD +S +L+A L ++S + V ++G G + V+ +LV LY KC +E
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALE 211
Query: 184 K---ARRVFDQMPEKDIVSWSSM-------------------------------IQGYAS 209
AR+V D+MP+KD ++W++M I GY
Sbjct: 212 ATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVH 271
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE--FLSNP 267
+G EA ++F M E + + +T VLSACA+ G G + R + F+
Sbjct: 272 SGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEA 331
Query: 268 VL--GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG------------------ 307
L L+ +Y+KCG +A A ++F MK KD V WN ++SG
Sbjct: 332 ALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391
Query: 308 --------LSMNGYVKVAFG-----VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+ ++GYV F +F ++ ++P T+ G + C G + G+Q
Sbjct: 392 YKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQ 451
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ ++ ++ + R G + EA+ + MP +++ W A+++ H
Sbjct: 452 LHGHLVQL-GFEGSNSAGNALITMYARCGAVKEANLMFLVMP-NIDSVSWNAMISALGQH 509
Query: 415 KKTDLAEHVLNQLIA 429
A + ++++A
Sbjct: 510 GHGREALELFDRMVA 524
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPE--KDIVSWSSMIQGYASNGFPKEALDMFYN-MQR 225
ATSLV YA G + A FD +P+ +D V +++I YA A+ +F + +
Sbjct: 91 ATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150
Query: 226 ENLKPEYYTMVGVLSA-----------CASL----------GALELGVWASSFMERNEFL 264
+L+P+ Y+ +LSA CA L G L + + + E L
Sbjct: 151 GSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEAL 210
Query: 265 ---------------SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
+ + TT++ Y + G + A VF E+ K VVWNA++SG
Sbjct: 211 EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYV 270
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV---FSLT 366
+G V AF +F ++ + + TF +L C +AG G+ ++R+ F
Sbjct: 271 HSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPE 330
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ +V L + G + A + +M + + + W +L+G
Sbjct: 331 AALPVNNALVTLYSKCGNIAVARRIFDNMKSK-DVVSWNTILSG 373
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/605 (38%), Positives = 361/605 (59%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKA 59
+I G +D A+ + + G P ++T VLKA + L + H +K
Sbjct: 394 VIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKT 453
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D FV T+L++ Y + +A +F + ++V+W A++SGY + + + +F
Sbjct: 454 NNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELF 512
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G + D F++ VL C L ++ K +H Y ++G +++V++ ++D+Y KC
Sbjct: 513 ALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 572
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+M A+ FD +P D V+W+++I G NG + AL +F M+ + P+ +T+ +
Sbjct: 573 GDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLA 632
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A + L ALE G + + S+P +GT+L+DMYAKCG + A +F+ ++ +
Sbjct: 633 KASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 692
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ GL+ +G K A +F Q+E GI+P+ TF+G+L C+H+GLV E ++ SM
Sbjct: 693 AWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSM 752
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R + + P IEHY C+ D LGR+G + EA LI SM ME +A ++ LLA CR+ T+
Sbjct: 753 HRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTET 812
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ V +L+ LEP +S YVLLSN+Y+A+ KW++ R+MM ++K G SW+EV
Sbjct: 813 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 872
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F+V D S+P +E IY K+ ++ +K G+VP TD L D+EEEEK+ L HSEK
Sbjct: 873 KIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEK 932
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL++T P IR+ KNLRVCGDCH A+K ISK+ REI++RD NRFH F +G CS
Sbjct: 933 LAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICS 992
Query: 600 CKDFW 604
C D+W
Sbjct: 993 CGDYW 997
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 232/442 (52%), Gaps = 12/442 (2%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
TF VL R LG + H + +K GLD V SL+N+Y + A VF+++
Sbjct: 324 TFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNM 383
Query: 92 PDKNVVSWTAIISGYINEGNLE-EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD-LST 149
+++++SW ++I+G I + +LE EA+ +F +LL GLKPD +++ VL A + L + LS
Sbjct: 384 SERDLISWNSVIAG-IAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSL 442
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+K IH + + + FV+T+L+D Y++ M++A +F + D+V+W++M+ GY
Sbjct: 443 SKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQ 501
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+ + L++F M ++ + + +T+ VL C L A+ G ++ ++ + + +
Sbjct: 502 SHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 561
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
+ ++DMY KCG M+ A F + D V W ++SG NG + A VF Q+ G+
Sbjct: 562 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGV 621
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFF-NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
P+ T L + +++GRQ N++ + P + +VD+ + G +D+A
Sbjct: 622 LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVG--TSLVDMYAKCGSIDDA 679
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYS 446
+ L K + M N W A+L G H + A + Q+ + ++P + ++ + + S
Sbjct: 680 YCLFKRIEMM-NITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKP-DKVTFIGVLSACS 737
Query: 447 ASHKWNDAAK-IRSMMGDKGIQ 467
S ++A K IRSM D GI+
Sbjct: 738 HSGLVSEAYKYIRSMHRDYGIK 759
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 165/334 (49%), Gaps = 6/334 (1%)
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
++S I+SGY++ G + F ++ L+ D + + VL +L L+ + +H
Sbjct: 287 IISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHC 346
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ G + V+ SL+++Y K + AR VF+ M E+D++SW+S+I G A + E
Sbjct: 347 MALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVE 406
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLG-ALELGVWASSFMERNEFLSNPVLGTTLI 274
A+ +F + R LKP++YTM VL A +SL L L + +++ + T LI
Sbjct: 407 AVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALI 466
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
D Y++ R + +V + D V WNA++SG + + +F + K G + +
Sbjct: 467 DAYSR-NRCMKEAEVLFGRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDF 525
Query: 335 TFVGLLCGCTHAGLVDEGRQFFN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
T +L C +++G+Q ++ + L + ++D+ + G + A
Sbjct: 526 TLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFD 583
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
S+P+ P+ + W L++GC + + + A HV +Q+
Sbjct: 584 SIPV-PDDVAWTTLISGCIENGEEERALHVFSQM 616
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 163/346 (47%), Gaps = 36/346 (10%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
L+ D LG +H+ I+ + + F+ +L+++Y CG L A +VFD +P++++
Sbjct: 53 LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112
Query: 97 VSWTAIISGYI--NEG---NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
VSW +I++ Y +EG N++EA +FR L + ++ +L C G + ++
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASE 172
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
HGY + G + FVA +LV++Y K G +++ R +F++MP +D+V W+ M++ Y G
Sbjct: 173 SFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMG 232
Query: 212 FPKEALDMFYNMQRENLKPEYYTM------VGVLSACASLGALELGVWASSFME---RNE 262
F +EA+D+ L P T+ G S + + E G AS+ E RN+
Sbjct: 233 FKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNK 292
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
LS Y G+ + K F +M + D + + V L + V++ G
Sbjct: 293 ILSG----------YLHAGQYSALLKCFMDMVESD-LECDQVTFILVLATAVRLDSLALG 341
Query: 323 QLEKCGIQPNG--------NTFVGLLCGCTHAGLVDEGRQFFNSMS 360
Q C G N+ + + C GL R FN+MS
Sbjct: 342 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGL---ARTVFNNMS 384
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/639 (39%), Positives = 378/639 (59%), Gaps = 48/639 (7%)
Query: 14 AIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A++ + M + G P + VL ACA + G + H +++GL D FV +++
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY---------------INEGNLE---- 113
++Y CG + +A KVF+ + K+VVSW A+++GY I E +E
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 352
Query: 114 ----------------EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY- 156
EA+++FR++L G +P+ ++V +L+ C G L K H +
Sbjct: 353 TWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHA 412
Query: 157 ------VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD--IVSWSSMIQGYA 208
++E G ++ V +L+D+Y+KC + + AR +FD +P KD +V+W+ +I G A
Sbjct: 413 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 472
Query: 209 SNGFPKEALDMFYNM-QREN-LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
+G EAL++F M Q +N + P +T+ L ACA LGAL G +++ RN F S
Sbjct: 473 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 532
Query: 267 PV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ + LIDMY+K G + A VF M ++ V W ++++G M+G + A +F +++
Sbjct: 533 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 592
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
K + P+G TFV +L C+H+G+VD+G +FN M++ F + P EHY CMVDLL R+G+L
Sbjct: 593 KVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 652
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
DEA ELI+ MPM+P VW ALL+ CR++ +L E+ NQL+ LE N G+Y LLSNIY
Sbjct: 653 DEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIY 712
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ + W D A+IR +M + GI+K GCSWV+ F GD SHP+S++IY L +L
Sbjct: 713 ANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLM 772
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
++KA G+VP L D+++EEK L+ HSEKLALA+G++TTAP IRI KNLR CG
Sbjct: 773 QRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACG 832
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH A IS I EIIVRD++RFH F GSCSC+ +W
Sbjct: 833 DCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 258/524 (49%), Gaps = 67/524 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR V + ++ Y M+ G+ P ++TFPFVLKAC F+ G H+++ +G
Sbjct: 116 LIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASG 175
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV---VSWTAIISGYINEGNLEEAIN 117
+ + FV L+++Y CG +A +VFD++ ++ V VSW +I++ Y+ G+ A+
Sbjct: 176 FEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMK 235
Query: 118 MFRRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
MF R+ G++PD+ S+V VL AC +G S K +HGY +G +VFV ++VD+Y
Sbjct: 236 MFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMY 295
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSM--------------------------------- 203
AKCG ME+A +VF++M KD+VSW++M
Sbjct: 296 AKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWS 355
Query: 204 --IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG--------VW 253
I GYA G EALD+F M +P T+V +LS CAS G L G W
Sbjct: 356 AVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKW 415
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM--KDKDQVVWNAVVSGLSMN 311
+ ++ N+ + ++ LIDMY+KC A +F + KD+ V W ++ G + +
Sbjct: 416 ILN-LDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQH 474
Query: 312 GYVKVAFGVFGQLEKCG--IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
G A +F Q+ + + PN T L C G + GRQ + R + M+
Sbjct: 475 GEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAML 534
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL-- 427
C++D+ +SG +D A + +M + N + W +L+ G +H + + A + ++
Sbjct: 535 FVANCLIDMYSKSGDVDAARVVFDNM-HQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQK 593
Query: 428 IALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
+ L P + +V++ +Y+ SH S M D+GI G
Sbjct: 594 VXLVP-DGVTFVVV--LYACSH---------SGMVDQGINYFNG 625
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 206/431 (47%), Gaps = 53/431 (12%)
Query: 52 SHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI-PDKNVVSW-TAIISGYINE 109
+H ++ GL D T ++++Y+ A AL V + P + V W +I ++
Sbjct: 67 THQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHL 123
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
G LE+ + ++RR+ G +PD ++ VL AC ++ +H V +G NVFV
Sbjct: 124 GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG 183
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEK---DIVSWSSMIQGYASNGFPKEALDMFYNMQRE 226
LV +Y +CG E AR+VFD+M E+ D+VSW+S++ Y G A+ MF M +
Sbjct: 184 NGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTED 243
Query: 227 -NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
++P+ ++V VL ACAS+GA G + R+ + +G ++DMYAKCG M +
Sbjct: 244 LGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEE 303
Query: 286 ACKVFREMKDKDQVVWNAVVSGLS------------------------------MNGYVK 315
A KVF MK KD V WNA+V+G S + GY +
Sbjct: 304 ANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQ 363
Query: 316 VAFG-----VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF-NSMSRVFSLTPM- 368
G VF Q+ CG +PN T V LL GC AG + G++ +++ + +L
Sbjct: 364 RGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDEND 423
Query: 369 ----IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV-WGALLAGCRLHKKTDLAEHV 423
+ ++D+ + A + +P + ++V W L+ G H + + A +
Sbjct: 424 PGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALEL 483
Query: 424 LNQLIALEPWN 434
+Q+ L+P N
Sbjct: 484 FSQM--LQPDN 492
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 171/336 (50%), Gaps = 16/336 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ A++ + M G P T +L CA G +H +K
Sbjct: 357 VIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWI 416
Query: 61 LDCDE-------FVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGN 111
L+ DE V +L+++Y C A +FD IP D++VV+WT +I G G
Sbjct: 417 LNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 476
Query: 112 LEEAINMFRRLLHRG--LKPDSFSIVRVLTACTQLGDLSTAKWIHGYV-NEAGKGRNVFV 168
EA+ +F ++L + P++F+I L AC +LG L + IH YV + +FV
Sbjct: 477 ANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFV 536
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
A L+D+Y+K G+++ AR VFD M +++ VSW+S++ GY +G +EAL +FY MQ+ L
Sbjct: 537 ANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXL 596
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERN-EFLSNPVLGTTLIDMYAKCGRMAQAC 287
P+ T V VL AC+ G ++ G+ + M ++ + ++D+ ++ GR+ +A
Sbjct: 597 VPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAM 656
Query: 288 KVFREMKDKDQ-VVWNAVVSGLSMNGYVKVAFGVFG 322
++ R M K VW A++S + Y V G +
Sbjct: 657 ELIRGMPMKPTPAVWVALLSACRV--YANVELGEYA 690
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/681 (35%), Positives = 369/681 (54%), Gaps = 81/681 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLG--VRSHSLI 56
MI F A+ + S+ ++ P +++F +L A + HD + + H +
Sbjct: 128 MISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAV 187
Query: 57 VKAGLDCDEFVKTSLLNLYVHC---GYLADALKVFDDIPDKNVVSWT------------- 100
K G V +L+ LY+ C G DA KV D++P+K+ ++WT
Sbjct: 188 HKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVH 247
Query: 101 ------------------AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT 142
A+ISGY+ G EA +FRR++ + + PD F+ +L+AC
Sbjct: 248 AARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACA 307
Query: 143 QLGDLSTAKWIHG--------YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
G K +HG +V EA N +LV LY+K G + A ++FD M
Sbjct: 308 NAGFFLHGKSVHGQFIRLQPDFVPEAALPVN----NALVTLYSKSGKIAVATKIFDSMTL 363
Query: 195 KDIVSWSS-------------------------------MIQGYASNGFPKEALDMFYNM 223
KD+VSW++ M+ GY G ++AL +F M
Sbjct: 364 KDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQM 423
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
+ E++KP YT G ++AC LGAL+ G + + + F ++ G L+ MYA+CG +
Sbjct: 424 RSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAV 483
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
A VF M + D V WNA++S L +G+ + A +F Q+ GI P+ +F+ +L C
Sbjct: 484 KDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTAC 543
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
HAGLVD+G Q+F SM R F ++P +HY ++DLLGR+G++ EA +LIK+MP EP +
Sbjct: 544 NHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAI 603
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGD 463
W A+L+GCR++ +L + +QL + P + G Y+LLSN YSA+ +W DAA++R +M D
Sbjct: 604 WEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRD 663
Query: 464 KGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
+G++K GCSW+EV VH FLVGD HP + ++Y L+ + K++ G+VP T L D
Sbjct: 664 RGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQD 723
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
+ EK+Y L HSE+LA++FGL+ + + KNL++CGDCH A+ +S+ GREI+
Sbjct: 724 MAPHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIV 783
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
VRD RFH F +G CSC ++W
Sbjct: 784 VRDVRRFHHFKDGECSCGNYW 804
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 172/374 (45%), Gaps = 49/374 (13%)
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMF 119
D TSL++ Y G L D+ FD +P ++ V A+IS + A+++F
Sbjct: 86 DPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVF 145
Query: 120 RRLLHR--GLKPDSFSIVRVLTACTQLGDLSTA--KWIHGYVNEAGKGRNVFVATSLVDL 175
R LL L+PD +S +L+A Q+ DL+ + +H V++ G G + V+ +L+ L
Sbjct: 146 RSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIAL 205
Query: 176 YAKC---GNMEKARRVFDQMPEKDIVSWSS------------------------------ 202
Y KC G AR+V D+MPEKD ++W++
Sbjct: 206 YMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWN 265
Query: 203 -MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG--VWASSFME 259
MI GY +G EA ++F M + + P+ +T +LSACA+ G G V
Sbjct: 266 AMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRL 325
Query: 260 RNEFLSNPVL--GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ +F+ L L+ +Y+K G++A A K+F M KD V WN ++SG +G + A
Sbjct: 326 QPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNA 385
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
+F ++ + +++ ++ G H GL ++ + FN M R + P Y V
Sbjct: 386 ARIFKEMP----YKSELSWMVMVSGYVHGGLAEDALKLFNQM-RSEDVKPCDYTYAGAVA 440
Query: 378 LLGRSGQLDEAHEL 391
G G L +L
Sbjct: 441 ACGELGALKHGKQL 454
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/605 (37%), Positives = 362/605 (59%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKA 59
MI G + + ++ + + G LP FT VL+AC+ L + H+ +KA
Sbjct: 978 MISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKA 1037
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G+ D FV T+L+++Y G + +A +F + ++ SW A++ GYI G+ +A+ ++
Sbjct: 1038 GVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLY 1097
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G + + ++ A L L K I V + G ++FV + ++D+Y KC
Sbjct: 1098 ILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKC 1157
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ME ARR+F+++P D V+W++MI G NG + AL +++M+ ++P+ YT ++
Sbjct: 1158 GEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLV 1217
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+ L ALE G + + +P + T+L+DMYAKCG + A +F+
Sbjct: 1218 KACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIA 1277
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ GL+ +G + A F +++ G+ P+ TF+G+L C+H+GLV E + F SM
Sbjct: 1278 SWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSM 1337
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+++ + P IEHY C+VD L R+G++ EA ++I SMP E +A ++ LL CR+ +
Sbjct: 1338 QKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRET 1397
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ V +L+ALEP +S YVLLSN+Y+A+++W + A R+MM ++K G SWV++
Sbjct: 1398 GKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKN 1457
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F+ GD SH ++ IY+K++ + +++ G++P TD L D+EEE+K+ L HSEK
Sbjct: 1458 KVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEK 1517
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GL+ T P +R+ KNLRVCGDCH AIK ISK+ RE+++RD NRFH F G CS
Sbjct: 1518 LAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCS 1577
Query: 600 CKDFW 604
C D+W
Sbjct: 1578 CGDYW 1582
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 206/417 (49%), Gaps = 7/417 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A++ + M N TF +L A + +LG + H ++V++GLD V L+N
Sbjct: 890 AVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLIN 949
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+YV G ++ A VF + + ++VSW +ISG G E ++ MF LL GL PD F+
Sbjct: 950 MYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFT 1009
Query: 134 IVRVLTACTQL-GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ VL AC+ L G A IH +AG + FV+T+L+D+Y+K G ME+A +F
Sbjct: 1010 VASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQ 1069
Query: 193 PEKDIVSWSSMIQGYASNG-FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
D+ SW++M+ GY +G FPK AL ++ MQ + T+ A L L+ G
Sbjct: 1070 DGFDLASWNAMMHGYIVSGDFPK-ALRLYILMQESGERANQITLANAAKAAGGLVGLKQG 1128
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + + F + + + ++DMY KCG M A ++F E+ D V W ++SG N
Sbjct: 1129 KQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVEN 1188
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF-NSMSRVFSLTPMIE 370
G + A + + +QP+ TF L+ C+ +++GRQ N++ + P +
Sbjct: 1189 GQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFV- 1247
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+VD+ + G +++A L K A W A++ G H + A ++
Sbjct: 1248 -MTSLVDMYAKCGNIEDARGLFKRTNTSRIA-SWNAMIVGLAQHGNAEEALQFFEEM 1302
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 168/332 (50%), Gaps = 31/332 (9%)
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
+V++W +S ++ G EA++ F +++ + D + V +L+ L L K IH
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
G V +G + V V L+++Y K G++ +AR VF QM E D+VSW++MI G A +G +
Sbjct: 930 GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLG------------ALELGVWASSFMERNE 262
++ MF ++ R L P+ +T+ VL AC+SLG A++ GV SF
Sbjct: 990 CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSF----- 1044
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
+ TTLID+Y+K G+M +A +F D WNA++ G ++G A ++
Sbjct: 1045 ------VSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYI 1098
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLV--DEGRQFFN-SMSRVFSLTPMIEHYGCMVDLL 379
+++ G + N T GLV +G+Q + R F+L + ++D+
Sbjct: 1099 LMQESGERANQITLAN--AAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFV--ISGVLDMY 1154
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ G+++ A + +P P+ + W +++GC
Sbjct: 1155 LKCGEMESARRIFNEIP-SPDDVAWTTMISGC 1185
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 174/381 (45%), Gaps = 31/381 (8%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-- 93
+L+ D LG R+H+ I+ +G D F+ +L+ +Y CG L+ A K+FD PD
Sbjct: 632 ILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTS 691
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
+++V+W AI+S + ++ + ++FR L + ++ V C S A+ +
Sbjct: 692 RDLVTWNAILSAHADKA--RDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESL 749
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
HGY + G +VFVA +LV++YAK G + +AR +FD M +D+V W+ M++ Y G
Sbjct: 750 HGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLE 809
Query: 214 KEALDMFYNMQRENLKPEYYTMVGVLSACAS-LGALELGVWASSFMERNEFLSNPVLGTT 272
EAL +F R L+P+ T+ + S LE W ++ GT
Sbjct: 810 YEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLE---WQLKQLK--------AYGTK 858
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L MY + D + WN +S G A F + + +
Sbjct: 859 LF-MYDD------------DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACD 905
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
G TFV +L ++ G+Q + R L ++ C++++ ++G + A +
Sbjct: 906 GLTFVVMLSVVAGLNCLELGKQIHGIVVRS-GLDQVVSVGNCLINMYVKTGSVSRARTVF 964
Query: 393 KSMPMEPNAIVWGALLAGCRL 413
M E + + W +++GC L
Sbjct: 965 WQMN-EVDLVSWNTMISGCAL 984
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 145/339 (42%), Gaps = 23/339 (6%)
Query: 9 DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK 68
D + + +R T T V K C H VK GL D FV
Sbjct: 706 DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVA 765
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+L+N+Y G + +A +FD + ++VV W ++ Y++ G EA+ +F GL+
Sbjct: 766 GALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLR 825
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
PD +T CT + K + + L L A K
Sbjct: 826 PDD------VTLCT--------------LARVVKSKQNVLEWQLKQLKAYG---TKLFMY 862
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
D D+++W+ + + G EA+D F +M + + T V +LS A L L
Sbjct: 863 DDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCL 922
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
ELG + R+ +G LI+MY K G +++A VF +M + D V WN ++SG
Sbjct: 923 ELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGC 982
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+++G + + G+F L + G+ P+ T +L C+ G
Sbjct: 983 ALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG 1021
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 109/218 (50%), Gaps = 17/218 (7%)
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
P FSI+R A + DL K H + +G + F+ +L+ +Y+KCG++ AR++
Sbjct: 627 PQWFSILRHAIAAS---DLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKL 683
Query: 189 FDQMPE--KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC---A 243
FD P+ +D+V+W++++ +A ++ +F ++R + +T+ V C A
Sbjct: 684 FDTTPDTSRDLVTWNAILSAHADKA--RDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSA 741
Query: 244 SLGALEL--GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
S A E G ++ + F++ L+++YAK GR+ +A +F M +D V+W
Sbjct: 742 SPSAAESLHGYAVKIGLQWDVFVAG-----ALVNIYAKFGRIREARVLFDGMGLRDVVLW 796
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
N ++ G A +F + + G++P+ T L
Sbjct: 797 NVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTL 834
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/537 (42%), Positives = 336/537 (62%), Gaps = 12/537 (2%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
++++ Y G +A+A ++FD P ++V +WTAI+SGY G LEEA +F + P
Sbjct: 298 TMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAM------P 351
Query: 130 DSFSIV--RVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
D ++ ++ A Q + AK + +A RNV +++ YA+ G +++AR
Sbjct: 352 DKNAVSWNAMMAAYVQRRMMEEAKELF----DAMPCRNVASWNTMLTGYAQAGMLDEARA 407
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
+F MP+KD VSW++M+ Y+ GF +E L +F M R VLS CA + A
Sbjct: 408 IFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAA 467
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
LE G+ S + + + +G L+ MY KCG M +A F EM+++D V WN +++G
Sbjct: 468 LECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAG 527
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
+ +G+ K A VF + K +P+ T VG+L C+H+GLV++G +F SM R F +
Sbjct: 528 YARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVAT 587
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
EHY CM+DLLGR+G+LDEA L+K MP EP++ +WGALL R+H+ ++L + ++
Sbjct: 588 KPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKI 647
Query: 428 IALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVG 487
LEP N+G YVLLSNIY++S KW D K+R +M ++G++K+ G SW+EV VH F VG
Sbjct: 648 FELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVG 707
Query: 488 DNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLI 547
D+ HP E IY+ L++L ++K AG+V TD VL D+EEEEK++ L HSEKLA+A+G++
Sbjct: 708 DSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGIL 767
Query: 548 TTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P IR+ KNLRVC DCH A K IS I GR II+RD+NRFH F +GSCSC D+W
Sbjct: 768 KIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 190/429 (44%), Gaps = 56/429 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ +N A+ F+ S+ P +F++ +L A LGV S V+A
Sbjct: 144 MLAGYAANGRLPQALSFFRSIPR----PDSFSYNTLLHA--------LGVSSSLADVRAL 191
Query: 61 LD----CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
D D +++ + + G ++ A FD P+K+ VSW +++ Y+ G ++EA
Sbjct: 192 FDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEA- 250
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
R L + D+ S ++ Q + A+ + + + R+V ++V Y
Sbjct: 251 ---RELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQ----RDVVSWNTMVSGY 303
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ G+M +ARR+FD P +D+ +W++++ GYA NG +EA +F M +N
Sbjct: 304 ARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKN--------- 354
Query: 237 GVLSACASLGALELGVWASSFMERNEFL------SNPVLGTTLIDMYAKCGRMAQACKVF 290
S A+ ME + L N T++ YA+ G + +A +F
Sbjct: 355 -----AVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIF 409
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M KD V W A+++ S G+ + +F ++ +CG N + F +L C ++
Sbjct: 410 GMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALE 469
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVD-----LLGRSGQLDEAHELIKSMPMEPNAIVWG 405
G Q SR+ + GC V + + G ++EAH + M E + + W
Sbjct: 470 CGMQLH---SRLIKAGYGV---GCFVGNALLAMYFKCGSMEEAHSAFEEME-ERDVVSWN 522
Query: 406 ALLAGCRLH 414
++AG H
Sbjct: 523 TMIAGYARH 531
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 174/382 (45%), Gaps = 42/382 (10%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
L+A AR+ + + D + + + ++ G + DA ++F +P ++
Sbjct: 79 LRAAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRST 138
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
++ +++GY G L +A++ FR + +PDSFS +L A LG S+ +
Sbjct: 139 STYNTMLAGYAANGRLPQALSFFRSI----PRPDSFSYNTLLHA---LGVSSSLADVRAL 191
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+E +V ++ +A G + AR FD PEKD VSW+ M+ Y NG +EA
Sbjct: 192 FDEMPVKDSVSY-NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEA 250
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP------VLG 270
++F + + E+ + S AL G S +E + + N V
Sbjct: 251 RELF------DSRTEWDAI--------SWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSW 296
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
T++ YA+ G MA+A ++F +D W A+VSG + NG ++ A VF +
Sbjct: 297 NTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMP----D 352
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMS--RVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
N ++ ++ +++E ++ F++M V S M+ Y ++G LDEA
Sbjct: 353 KNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGY-------AQAGMLDEA 405
Query: 389 HELIKSMPMEPNAIVWGALLAG 410
+ MP + +A+ W A+LA
Sbjct: 406 RAIFGMMP-QKDAVSWAAMLAA 426
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ ++ + M G F VL CA + G++ HS ++KAG FV +L
Sbjct: 434 EETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNAL 493
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
L +Y CG + +A F+++ +++VVSW +I+GY G +EA+ +F + KPD
Sbjct: 494 LAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDD 553
Query: 132 FSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
++V VL AC+ G + + + + G T ++DL + G +++A +
Sbjct: 554 ITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMK 613
Query: 191 QMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQREN 227
MP E D W +++ + ++ + A + + ++ EN
Sbjct: 614 DMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPEN 654
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 144/318 (45%), Gaps = 42/318 (13%)
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ + + G + A R+F MP + ++++M+ GYA+NG +AL F ++ R + Y
Sbjct: 114 ITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPD-SFSY 172
Query: 233 YTMVGVLSACASLG-------------ALELGVWASSF-------MERNEFLSNP----V 268
T++ L +SL ++ V SS + R+ F P V
Sbjct: 173 NTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAV 232
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
++ Y + GR+ +A ++F + D + WNA+++G ++ A +F ++ +
Sbjct: 233 SWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRD 292
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFN--SMSRVFSLTPMIEHYGCMVDLLGRSGQLD 386
+ + NT V G G + E R+ F+ + VF+ T ++ Y ++G L+
Sbjct: 293 VV-SWNTMV---SGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGY-------AQNGMLE 341
Query: 387 EAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYS 446
EA + +MP + NA+ W A++A + + A+ + + A+ N ++ + Y+
Sbjct: 342 EAKRVFDAMP-DKNAVSWNAMMAAYVQRRMMEEAKELFD---AMPCRNVASWNTMLTGYA 397
Query: 447 ASHKWNDAAKIRSMMGDK 464
+ ++A I MM K
Sbjct: 398 QAGMLDEARAIFGMMPQK 415
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/519 (42%), Positives = 320/519 (61%), Gaps = 6/519 (1%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+RG + + +E Y +++ G NFT+PF+ AC G H L+ KA
Sbjct: 98 MLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKA 157
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD DE+V SL+ +Y CG + A KVFD++ D+++VSW ++ISGY G +EAI +F
Sbjct: 158 GLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLF 217
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G +PD ++V VL AC LGDL +W+ G+V E N ++ ++L+D+Y KC
Sbjct: 218 MEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKC 277
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ ARRVFD MP KD+V+W+++I GYA NG EA+ +F M+ P+ TM+ VL
Sbjct: 278 GDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVL 337
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SAC+++GAL+LG W + + + + LIDMYAKCG + A +VF M K++V
Sbjct: 338 SACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEV 397
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEK--CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
WNA++S L+ +G + A +F ++ K +QPN TF+G+L C HAGLVDEGRQ F
Sbjct: 398 SWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFE 457
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
SM+ F L P +EHY CMVDL R+G L EA +LIK MP +P+ IV G+LL C+ +
Sbjct: 458 SMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNA 517
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
D+ E V+ + +E NSGNYV+ S IY+ +W+D+AK+R +M G+ K GCSW+++
Sbjct: 518 DVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDI 577
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
VHEF GD+ H S IY L+E ++K G++P
Sbjct: 578 GAHVHEFHAGDSLHNHSMNIYQLLNE---EMKREGYIPN 613
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/563 (41%), Positives = 338/563 (60%), Gaps = 31/563 (5%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+L++ YV G +++A ++FD +P ++VVSW ++SGY G++ EA RRL
Sbjct: 197 NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEA----RRLFDAAPV 252
Query: 129 PDSFSIVRVLTACTQLGDLSTAK-------------W---IHGYV-----NEAGK----- 162
D F+ V++ Q G L A+ W + Y+ +EA +
Sbjct: 253 RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Query: 163 -GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
RNV +++ YA+ G +E+A+ VFD MP+KD VSW++M+ Y+ G +E L +F
Sbjct: 313 PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFI 372
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
M R VLS CA + ALE G+ + R + +G L+ MY KCG
Sbjct: 373 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCG 432
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
M A F EM+++D V WN +++G + +G+ K A +F + +P+ T VG+L
Sbjct: 433 NMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLA 492
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C+H+GLV++G +F SM F +T EHY CM+DLLGR+G+L EAH+L+K MP EP++
Sbjct: 493 ACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDS 552
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMM 461
+WGALL R+H+ +L ++ LEP N+G YVLLSNIY++S KW DA K+R MM
Sbjct: 553 TMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMM 612
Query: 462 GDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVL 521
++G++K+ G SW+EV VH F GD HP EKIY+ L++L ++K AG+V TD VL
Sbjct: 613 EERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVL 672
Query: 522 FDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGRE 581
D+EEEEK++ L HSEKLA+A+G++ P IR+ KNLRVCGDCH A K IS I GR
Sbjct: 673 HDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRL 732
Query: 582 IIVRDNNRFHCFIEGSCSCKDFW 604
I++RD+NRFH F GSCSC D+W
Sbjct: 733 ILLRDSNRFHHFRGGSCSCGDYW 755
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 186/430 (43%), Gaps = 58/430 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ +N A + ++ P N+++ +L A A S SL G
Sbjct: 75 MLAGYSANGRLPLAASLFRAIPR----PDNYSYNTLLHALAV---------SSSLADARG 121
Query: 61 LDCDEFVKTS-----LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
L + V+ S +++ + + G ++ A FD P+K+ VSW +++ Y+ G +EEA
Sbjct: 122 LFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEA 181
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
R L + + D S +++ Q G +S A+ + + GR+V +V
Sbjct: 182 ----RGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRM----PGRDVVSWNIMVSG 233
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
YA+ G+M +ARR+FD P +D+ +W++++ GYA NG +EA +F M N
Sbjct: 234 YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERN-------- 285
Query: 236 VGVLSACASLGALELGVWASSFMERNEFL------SNPVLGTTLIDMYAKCGRMAQACKV 289
S A+ M+ + L N T++ YA+ G + +A V
Sbjct: 286 ------AVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAV 339
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F M KD V W A+++ S G + +F ++ +CG N + F +L C +
Sbjct: 340 FDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAAL 399
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVD-----LLGRSGQLDEAHELIKSMPMEPNAIVW 404
+ G Q + R GC V + + G +++A + M E + + W
Sbjct: 400 ECGMQLHGRLIRAGYGV------GCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVVSW 452
Query: 405 GALLAGCRLH 414
++AG H
Sbjct: 453 NTMIAGYARH 462
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 160/347 (46%), Gaps = 42/347 (12%)
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+ ++ G +ADA ++F +P ++ ++ A+++GY G L A ++FR + +PD+
Sbjct: 45 ITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI----PRPDN 100
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+S +L A L+ A+ G +E R+ ++ +A G + AR FD
Sbjct: 101 YSYNTLLHALAVSSSLADAR---GLFDEM-PVRDSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
PEKD VSW+ M+ Y NG +EA +F N + E+ + S AL G
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLF------NSRTEWDVI--------SWNALMSG 202
Query: 252 V--WASSFMERNEFLSNP----VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
W R F P V ++ YA+ G M +A ++F +D W AVV
Sbjct: 203 YVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVV 262
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS--RVF 363
SG + NG ++ A VF + + N ++ ++ ++DE ++ FN M V
Sbjct: 263 SGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA 318
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
S M+ Y ++G L+EA + +MP + +A+ W A+LA
Sbjct: 319 SWNTMLTGY-------AQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 5/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + C + ++ + M G F VL CA + G++ H +++AG
Sbjct: 354 MLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAG 413
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
FV +LL +Y CG + DA F+++ +++VVSW +I+GY G +EA+ +F
Sbjct: 414 YGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFD 473
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ KPD ++V VL AC+ G + + + ++ G T ++DL +
Sbjct: 474 MMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRA 533
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFP---KEALDMFYNMQREN 227
G + +A + MP E D W +++ + P + A + + ++ EN
Sbjct: 534 GRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPEN 585
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 128/302 (42%), Gaps = 49/302 (16%)
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
V + + + + G + A R+F MP + ++++M+ GY++NG A +F + R
Sbjct: 38 VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR 97
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT----TLIDMYAKCG 281
P+ Y+ +L A L V +S R F PV + +I +A G
Sbjct: 98 ----PDNYSYNTLLHA--------LAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHG 145
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
++ A F +KD V WN +++ NG V+ A G+F + + ++ L+
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI----SWNALMS 201
Query: 342 GCTHAGLVDEGRQFFNSMS------------------------RVFSLTPM--IEHYGCM 375
G G + E R+ F+ M R+F P+ + + +
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAV 261
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEPW 433
V ++G L+EA + +MP E NA+ W A++A + D A+ + N + + W
Sbjct: 262 VSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASW 320
Query: 434 NS 435
N+
Sbjct: 321 NT 322
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/626 (37%), Positives = 353/626 (56%), Gaps = 36/626 (5%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
+E + + +G + + + LK C R D LG+ H ++K G D D +++ +L+N
Sbjct: 508 LEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNF 567
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
Y C L A +VF ++P+ + W I + L++ + +FR++ LK ++ +I
Sbjct: 568 YGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATI 627
Query: 135 VRVLTAC-TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
VRVL A ++LG L+ K HGYV G +V+V TSL+D+Y K ++ A+ VFD M
Sbjct: 628 VRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMK 687
Query: 194 EK-----------------------------------DIVSWSSMIQGYASNGFPKEALD 218
+ D+V+W+ MI GYA G KEAL
Sbjct: 688 NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALA 747
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
F MQ+E + P ++ +L ACASL L+ G RN F+ + + T LIDMY+
Sbjct: 748 FFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYS 807
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
K + A KVFR +++K WN ++ G ++ G K A VF +++K G+ P+ TF
Sbjct: 808 KSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTA 867
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
LL C ++GL+ EG ++F+SM + + P +EHY CMVDLLGR+G LDEA +LI +MP++
Sbjct: 868 LLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLK 927
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIR 458
P+A +WGALL CR+HK AE L LEP NS NY+L+ N+YS ++W D +R
Sbjct: 928 PDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLR 987
Query: 459 SMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTD 518
+MG G++ + SW++++ VH F + HP + KIY +L +L +++K G+VP +
Sbjct: 988 ELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVN 1047
Query: 519 HVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKIT 578
V +++E EKQ L H+EKLA+ +GLI + IR+ KN R+C DCH A K IS +
Sbjct: 1048 CVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVK 1107
Query: 579 GREIIVRDNNRFHCFIEGSCSCKDFW 604
RE+ +RD RFH F EG CSC DFW
Sbjct: 1108 ARELFLRDGVRFHHFREGKCSCNDFW 1133
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 152/294 (51%), Gaps = 2/294 (0%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINE-GNLEEAINMFRRLLHRGLK 128
+L++ Y+ G A VF +N + W + + + + G+L + +F+ L +G+
Sbjct: 461 NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 520
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
DS L CT++ D+ IHG + + G +V++ +L++ Y +C +EKA +V
Sbjct: 521 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 580
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS-LGA 247
F +MP + + W+ I + ++ +++F MQ LK E T+V VL A S LG
Sbjct: 581 FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGF 640
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
L +G ++ RN F + +GT+LIDMY K + A VF MK+++ WN++VSG
Sbjct: 641 LNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSG 700
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
S G + A + Q+EK GI+P+ T+ G++ G G E FF M +
Sbjct: 701 YSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQ 754
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ C + A+ F+ M+ EG +P + + +L+ACA Q G H L ++ G
Sbjct: 732 MISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNG 791
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV T+L+++Y L +A KVF I +K + SW +I G+ G +EAI++F
Sbjct: 792 FIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFN 851
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ PD+ + +L+AC G + K+ + + + +VDL +
Sbjct: 852 EMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRA 911
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMI 204
G +++A + MP K D W +++
Sbjct: 912 GYLDEAWDLIHTMPLKPDATIWGALL 937
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/547 (40%), Positives = 339/547 (61%), Gaps = 32/547 (5%)
Query: 2 IRGFVSNDCFQHAIEFYNS-MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
IRGF+ ++ + A+ Y ++ +G P N+T+P + KACAR ++G ++ G
Sbjct: 78 IRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLG 137
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FV ++++L V CG L A K+FD +++VSW ++I+GY+ G EA+N +R
Sbjct: 138 FDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYR 197
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+KPD +++ V+++C QL DL + H Y+ E G V +A +L+D+Y KCG
Sbjct: 198 EMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCG 257
Query: 181 NMEKARRVFD-------------------------------QMPEKDIVSWSSMIQGYAS 209
N+E AR++FD +MP+KD+V W++MI GY
Sbjct: 258 NLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVH 317
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
KEAL +F MQ N+ P+ TMV LSAC+ LGAL++G+W ++E++E N L
Sbjct: 318 ANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVAL 377
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
GT LIDMYAKCG++ +A +VF+E+ ++ + W A++SGL+++G A F ++ +
Sbjct: 378 GTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSV 437
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
P+ TF+GLL C H GLV+EGR++F+ MS F+L+P ++HY CMVDLLGR+G L+EA
Sbjct: 438 MPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAE 497
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
ELIKSMP+E +A+VWGAL CR+H + E ++L+ ++P +SG YVLL+N+Y +
Sbjct: 498 ELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAE 557
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
W +A K R +M +G++K GCS +EV+G+V+EF+V D SHP SE+IY L +L +L+
Sbjct: 558 MWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLE 617
Query: 510 AAGFVPT 516
P
Sbjct: 618 LVECTPV 624
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 186/368 (50%), Gaps = 34/368 (9%)
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAK 151
+ N SW I G+++ N EA+ +++R+L G KPD+++ + AC +L +
Sbjct: 68 NPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGS 127
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
I G+V G ++FV+ +++ L CG+++ AR++FD+ +D+VSW+SMI GY G
Sbjct: 128 EILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRG 187
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
+ EAL+ + M+ E +KP+ TM+GV+S+CA L L+LG + ++E N L
Sbjct: 188 WAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLAN 247
Query: 272 TLIDMYAKCGRMAQ-------------------------------ACKVFREMKDKDQVV 300
L+DMY KCG + A K+F EM DKD V
Sbjct: 248 ALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVP 307
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G K A +F +++ I P+ T V L C+ G +D G + +
Sbjct: 308 WNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIE 367
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ L+ + ++D+ + G++ +A ++ + +P N++ W A+++G LH A
Sbjct: 368 K-HELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGNAHGA 425
Query: 421 EHVLNQLI 428
+++I
Sbjct: 426 IAYFSEMI 433
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 177/348 (50%), Gaps = 35/348 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V A+ FY M+ EG P T V+ +CA+ D LG SH I + G
Sbjct: 179 MINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENG 238
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE------- 113
L + +L+++Y+ CG L A K+FD + +K +VSWT ++ GY G L+
Sbjct: 239 LKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFD 298
Query: 114 ------------------------EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
EA+ +F + + PD ++V L+AC+QLG L
Sbjct: 299 EMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDV 358
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
WIH Y+ + NV + T+L+D+YAKCG + KA +VF ++P ++ ++W+++I G A
Sbjct: 359 GIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLAL 418
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+G A+ F M ++ P+ T +G+LSAC G +E G S M ++F +P L
Sbjct: 419 HGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMS-SKFNLSPKL 477
Query: 270 G--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYV 314
+ ++D+ + G + +A ++ + M + D VVW A+ ++G V
Sbjct: 478 KHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNV 525
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/636 (36%), Positives = 353/636 (55%), Gaps = 32/636 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I GF S +++ Y ++ R E PT T ++ + D LG H +++
Sbjct: 116 LITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRL 175
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV---------------------- 97
G FV + L+++Y G + DA +VF ++ K VV
Sbjct: 176 GFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLF 235
Query: 98 ---------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+WT +++G G EA+++FRR+ G+ D ++ +LTAC L
Sbjct: 236 QLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASE 295
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K IH Y+ NVFV ++LVD+Y+KC ++ A VF +M ++I+SW++MI GY
Sbjct: 296 EGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYG 355
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
N +EA+ F MQ + +KP+ +T+ V+S+CA+L +LE G + +
Sbjct: 356 QNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYIT 415
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ L+ +Y KCG + A ++F EM DQV W A+V+G + G K +F ++ G
Sbjct: 416 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNG 475
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
++P+G TF+G+L C+ AGLV++G +F+SM + + P+ +HY CM+DL RSG+ EA
Sbjct: 476 LKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEA 535
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
E IK MP P+A W LL+ CRL ++ + L+ +P N +YVLL ++++A
Sbjct: 536 EEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAK 595
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
+W + A +R M D+ ++K GCSW++ VH F D SHP S +IY KL+ L +K+
Sbjct: 596 GQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
G+ P VL D+ + +K + ++ HSEKLA+AFGLI + IRI KNLRVC DCH
Sbjct: 656 AEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCH 715
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A K ISKITGR+I+VRD RFH F +G+CSC DFW
Sbjct: 716 NATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 198/415 (47%), Gaps = 38/415 (9%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P F +L A A+ R + D + F + +LL+ H + D ++
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARR----VFDEMPDPNLFTRNALLSALAHSRLVPDMERL 101
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGD 146
F +P+++ VS+ A+I+G+ + G+ ++ ++R LL ++P ++ ++ + L D
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP------------- 193
+ +H V G G FV + LVD+YAK G + ARRVF +M
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221
Query: 194 ------------------EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
++D ++W++M+ G NG EALD+F M+ E + + YT
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+L+AC +L A E G +++ R + N +G+ L+DMY+KC + A VFR M
Sbjct: 282 GSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTC 341
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
++ + W A++ G N + A F +++ GI+P+ T ++ C + ++EG Q
Sbjct: 342 RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ- 400
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F+ ++ V L I +V L G+ G +++AH L M + + W AL+ G
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVTG 454
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/580 (41%), Positives = 353/580 (60%), Gaps = 5/580 (0%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALK 86
LP + + F+L+A R L + H+ I+ +G + T LLNL G ++ +
Sbjct: 9 LPHSPAYNFLLQAGPR---LYLLHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQ 65
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLE-EAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+F +P+ + +T++I N ++ + R++ + P +++ V+ +C L
Sbjct: 66 IFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLS 125
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
L + +HG+V G G +V+V +LV LY KCG++ AR+VFD++ E+ IV+W+SMI
Sbjct: 126 ALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVAWNSMIS 185
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GY NGF KEA+ +F M+ ++P+ T V VLSACA LGA LG W ++ N
Sbjct: 186 GYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDL 245
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
N VLGT+LI+MY +CG +++A +VF MK+++ V W A++SG NGY A +F ++
Sbjct: 246 NVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMR 305
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
+ G+ PN TFV +L C HAGLV+EGR+ F S+ + L P +EH C+VD+LGR+G L
Sbjct: 306 RNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLL 365
Query: 386 DEAHELIK-SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
DEA+ IK +P P + A+L C++HK DL V L+A EP N +YV+LSNI
Sbjct: 366 DEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVILSNI 425
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+ + + + +R+ M K ++K G S VEVD + F +GD SH + IY LDEL
Sbjct: 426 YALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLFSMGDKSHSETNAIYHYLDEL 485
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
K AG+VP +D V+ ++EEEE++Y L HSEKLA+AFGL+ T+ IRI KNLR+C
Sbjct: 486 MWKCSEAGYVPVSDSVMHELEEEEREYALRYHSEKLAIAFGLLKTSHGTPIRIVKNLRMC 545
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH AIK IS I+ REIIVRD RFH F GSCSC D+W
Sbjct: 546 EDCHSAIKFISAISSREIIVRDKLRFHHFKVGSCSCLDYW 585
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 165/281 (58%), Gaps = 1/281 (0%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
+++ FY+ M P+N+TF V+K+CA + G H ++ G D +V+ +L+
Sbjct: 94 YSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALV 153
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
LY CG L +A KVFD I ++++V+W ++ISGY G +EAI +F R+ G++PDS
Sbjct: 154 ALYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSA 213
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ V VL+AC LG S W+H Y+ G NV + TSL+++Y +CGN+ KAR VFD M
Sbjct: 214 TFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSM 273
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG- 251
E+++V+W++MI GY +NG+ +A+++F+ M+R L P T V VLSACA G + G
Sbjct: 274 KERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGR 333
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+S E + L+DM + G + +A +E
Sbjct: 334 RLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKE 374
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 135/298 (45%), Gaps = 37/298 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N + AI ++ M+ G P + TF VL ACA F LG H IV G
Sbjct: 183 MISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNG 242
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + + TSL+N+Y+ CG ++ A +VFD + ++NVV+WTA+ISGY G +A+ +F
Sbjct: 243 LDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFH 302
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GL P+S + V VL+AC G VNE GR +F S+ + Y
Sbjct: 303 EMRRNGLFPNSITFVAVLSACAHA----------GLVNE---GRRLF--ASIREEYHLVP 347
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL--KPEYYTMVGV 238
+E + D + + LD YN +E + P + +
Sbjct: 348 GVEHNVCLVDMLGRAGL-------------------LDEAYNFIKEEIPENPAPAILTAM 388
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
L AC +LG + + E NP L ++YA GRM Q V M K
Sbjct: 389 LGACKMHKNFDLGAQVAEHLLAAE-PENPAHYVILSNIYALAGRMDQVEIVRNNMIRK 445
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/612 (40%), Positives = 358/612 (58%), Gaps = 10/612 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N CF A+E Y SMR LP +FT L +CA +LG + H +K G
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI-NEGNLEEAINMF 119
+D + V +L+ LY GYL + K+F +P+ + VSW +II +E +L EA+ F
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 120 RRLLHRGLKPD--SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
G K + +FS V + G+L K IHG + +L+ Y
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEATTENALIACYG 563
Query: 178 KCGNMEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
KCG M+ ++F +M E+ D V+W+SMI GY N +ALD+ + M + + + +
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VLSA AS+ LE G+ + R S+ V+G+ L+DMY+KCGR+ A + F M +
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 683
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+ WN+++SG + +G + A +F ++ G P+ TFVG+L C+HAGL++EG +
Sbjct: 684 NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 743
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLH 414
F SMS + L P IEH+ CM D+LGR+G+LD+ + I+ MPM+PN ++W +L A CR +
Sbjct: 744 FESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
Query: 415 -KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
+K +L + L LEP N+ NYVLL N+Y+A +W D K R M D ++K G S
Sbjct: 804 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
WV + VH F+ GD SHP ++ IY KL EL K++ AG+VP T L+D+E+E K+ L
Sbjct: 864 WVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEIL 923
Query: 534 ACHSEKLALAFGLITTAPKDV-IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
+ HSEKLA+AF L + IRI KNLRVCGDCH A K ISKI GR+II+RD+NRFH
Sbjct: 924 SYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHH 983
Query: 593 FIEGSCSCKDFW 604
F +G+CSC DFW
Sbjct: 984 FQDGACSCSDFW 995
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 205/436 (47%), Gaps = 17/436 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQL--GVRSHSLIVK 58
++ G+ N + A+ F M EG + F VL+AC + G + H L+ K
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 59 AGLDCDEFVKTSLLNLYVHC-GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
D V L+++Y C G + AL F DI KN VSW +IIS Y G+ A
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLG--DLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+F + + G +P ++ ++T L D+ + I + ++G ++FV + LV
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSA 252
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYT 234
+AK G++ AR+VF+QM ++ V+ + ++ G + +EA +F +M ++ PE Y
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 235 MVGVLSACASLG-ALELGVWASSFMERNEFLSNPV-----LGTTLIDMYAKCGRMAQACK 288
+ +LS+ A E+G+ + + + V +G L++MYAKCG +A A +
Sbjct: 313 I--LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR 370
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF M DKD V WN++++GL NG A + + + I P T + L C
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
G+Q S + + ++ L +G L+E ++ SMP E + + W +++
Sbjct: 431 AKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSII 488
Query: 409 AGCRLHKKTDLAEHVL 424
G + L E V+
Sbjct: 489 -GALARSERSLPEAVV 503
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 204/407 (50%), Gaps = 9/407 (2%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTF-PFVLKACA-REHDFQLGVRSHSLIVKAGLDCDEFVKT 69
+ A ++SM+ +G PT +TF V AC+ E D +L + I K+GL D FV +
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGS 247
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLK 128
L++ + G L+ A KVF+ + +N V+ ++ G + + EEA +F + +
Sbjct: 248 GLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVS 307
Query: 129 PDSFSIVRVLTACTQLGD---LSTAKWIHGYVNEAG-KGRNVFVATSLVDLYAKCGNMEK 184
P+S+ I+ L + L + +HG+V G V + LV++YAKCG++
Sbjct: 308 PESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIAD 367
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
ARRVF M +KD VSW+SMI G NG EA++ + +M+R ++ P +T++ LS+CAS
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCAS 427
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
L +LG + N + L+ +YA+ G + + K+F M + DQV WN++
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSI 487
Query: 305 VSGLSMNGY-VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+ L+ + + A F ++ G + N TF +L + + G+Q + ++
Sbjct: 488 IGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLALKN 546
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++ ++ G+ G++D ++ M + + W ++++G
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 192/410 (46%), Gaps = 6/410 (1%)
Query: 41 AREHDFQLGVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSW 99
A E + G H ++ GL D + L+N+Y CG +ADA +VF + DK+ VSW
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSW 383
Query: 100 TAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE 159
++I+G G EA+ ++ + + P SF+++ L++C L + IHG +
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 443
Query: 160 AGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA-SNGFPKEALD 218
G NV V+ +L+ LYA+ G + + R++F MPE D VSW+S+I A S EA+
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVV 503
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
F N QR K T VLSA +SL ELG +N LI Y
Sbjct: 504 CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYG 563
Query: 279 KCGRMAQACKVFREMKD-KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
KCG M K+F M + +D V WN+++SG N + A + + + G + + +
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
+L ++ G + R L + +VD+ + G+LD A +MP+
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRA-CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 398 EPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
N+ W ++++G H + + A + + + L+ ++V + SA
Sbjct: 683 R-NSYSWNSMISGYARHGQGEEALKLF-ETMKLDGQTPPDHVTFVGVLSA 730
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 206/418 (49%), Gaps = 30/418 (7%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
HS + K LD D ++ +L+N Y+ G A KVFD++P +N VSW I+SGY G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST--AKWIHGYVNEAGKGRNVFVAT 170
+EA+ R ++ G+ + ++ V VL AC ++G + + IHG + + + V+
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 171 SLVDLYAKC-GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
L+ +Y KC G++ A F + K+ VSW+S+I Y+ G + A +F +MQ + +
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 230 PEYYTMVGVLSACASLGALELGVWASSF--MERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
P YT +++ SL ++ + ++++ L++ +G+ L+ +AK G ++ A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
KVF +M+ ++ V N ++ GL + + A +F + I + ++V LL
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYS 322
Query: 348 LVDE-----GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
L +E GR+ + + M+ +V++ + G + +A + M + +++
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DKDSV 381
Query: 403 VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNS--------GNYVLLSNIYS-ASHKW 451
W +++ G L + E A+E + S G++ L+S++ S AS KW
Sbjct: 382 SWNSMITG--LDQNGCFIE-------AVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 150/307 (48%), Gaps = 15/307 (4%)
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+G A++ H + + ++V++ +L++ Y + G+ AR+VFD+MP ++ VSW+ +
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL--GVWASSFMERN 261
+ GY+ NG KEAL +M +E + Y V VL AC +G++ + G M +
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL 133
Query: 262 EFLSNPVLGTTLIDMYAKC-GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ + V+ LI MY KC G + A F +++ K+ V WN+++S S G + AF +
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRI 193
Query: 321 FGQLEKCGIQPNGNTFVGLL---CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
F ++ G +P TF L+ C T V Q ++ + LT + G +V
Sbjct: 194 FSSMQYDGSRPTEYTFGSLVTTACSLTEPD-VRLLEQIMCTIQKSGLLTDLFVGSG-LVS 251
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV---LNQLIALEPWN 434
+SG L A ++ M NA+ L+ G K + A + +N +I + P
Sbjct: 252 AFAKSGSLSYARKVFNQMETR-NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP-- 308
Query: 435 SGNYVLL 441
+YV+L
Sbjct: 309 -ESYVIL 314
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 251/639 (39%), Positives = 376/639 (58%), Gaps = 48/639 (7%)
Query: 14 AIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A++ + M + G P + VL ACA + G + H +++GL D FV +++
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL---------- 122
++Y CG + +A KVF+ + K+VVSW A+++GY G ++A+ +F ++
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 333
Query: 123 ---------LHRGL----------------KPDSFSIVRVLTACTQLGDLSTAKWIHGY- 156
RGL +P+ ++V +L+ C G L K H +
Sbjct: 334 TWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHA 393
Query: 157 ------VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD--IVSWSSMIQGYA 208
++E G ++ V +L+D+Y+KC + + AR +FD +P KD +V+W+ +I G A
Sbjct: 394 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 453
Query: 209 SNGFPKEALDMFYNM-QREN-LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
+G EAL++F M Q +N + P +T+ L ACA LGAL G +++ RN F S
Sbjct: 454 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 513
Query: 267 PV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ + LIDMY+K G + A VF M ++ V W ++++G M+G + A +F +++
Sbjct: 514 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 573
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
K G+ P+G TFV +L C+H+G+VD+G +FN M++ F + P EHY CMVDLL R+G+L
Sbjct: 574 KVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 633
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
DEA ELI+ MPM+P VW ALL+ CR++ +L E+ NQL+ LE N G+Y LLSNIY
Sbjct: 634 DEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIY 693
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ + W D A+IR +M + GI+K GCSWV+ F GD SHP+S++IY L +L
Sbjct: 694 ANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLM 753
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
++KA G+VP L D+++EEK L+ HSEKLALA+G++TTAP IRI KNLR CG
Sbjct: 754 QRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACG 813
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH A IS I EIIVRD++RFH F GSCSC+ +W
Sbjct: 814 DCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 156/524 (29%), Positives = 258/524 (49%), Gaps = 67/524 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR V + ++ Y M+ G+ P ++TFPFVLKAC F+ G H+++ +G
Sbjct: 97 LIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASG 156
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV---VSWTAIISGYINEGNLEEAIN 117
+ + FV L+++Y CG +A +VFD++ ++ V VSW +I++ Y+ G+ A+
Sbjct: 157 FEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMK 216
Query: 118 MFRRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
MF R+ G++PD+ S+V VL AC +G S K +HGY +G +VFV ++VD+Y
Sbjct: 217 MFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMY 276
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSM--------------------------------- 203
AKCG ME+A +VF++M KD+VSW++M
Sbjct: 277 AKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWS 336
Query: 204 --IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG--------VW 253
I GYA G EALD+F M+ +P T+V +LS CA G L G W
Sbjct: 337 AVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKW 396
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM--KDKDQVVWNAVVSGLSMN 311
+ ++ N+ + ++ LIDMY+KC A +F + KD+ V W ++ G + +
Sbjct: 397 ILN-LDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQH 455
Query: 312 GYVKVAFGVFGQLEKCG--IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
G A +F Q+ + + PN T L C G + GRQ + R + M+
Sbjct: 456 GEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAML 515
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL-- 427
C++D+ +SG +D A + +M + N + W +L+ G +H + + A + ++
Sbjct: 516 FVANCLIDMYSKSGDVDAARVVFDNM-HQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQK 574
Query: 428 IALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
+ L P + +V++ +Y+ SH S M D+GI G
Sbjct: 575 VGLVP-DGVTFVVV--LYACSH---------SGMVDQGINYFNG 606
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 205/430 (47%), Gaps = 53/430 (12%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI-PDKNVVSW-TAIISGYINEG 110
H ++ GL D T ++++Y+ A AL V + P + V W +I ++ G
Sbjct: 49 HQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLG 105
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
LE+ + ++RR+ G +PD ++ VL AC ++ +H V +G NVFV
Sbjct: 106 FLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGN 165
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEK---DIVSWSSMIQGYASNGFPKEALDMFYNMQRE- 226
LV +Y +CG E AR+VFD+M E+ D+VSW+S++ Y G A+ MF M +
Sbjct: 166 GLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDL 225
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
++P+ ++V VL ACAS+GA G + R+ + +G ++DMYAKCG M +A
Sbjct: 226 GIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEA 285
Query: 287 CKVFREMKDKDQVVWNAVVSGLS------------------------------MNGYVKV 316
KVF MK KD V WNA+V+G S + GY +
Sbjct: 286 NKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQR 345
Query: 317 AFG-----VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF-NSMSRVFSLTPM-- 368
G VF Q+ CG +PN T V LL GC AG + G++ +++ + +L
Sbjct: 346 GLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDP 405
Query: 369 ---IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV-WGALLAGCRLHKKTDLAEHVL 424
+ ++D+ + A + +P + ++V W L+ G H + + A +
Sbjct: 406 GDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELF 465
Query: 425 NQLIALEPWN 434
+Q+ L+P N
Sbjct: 466 SQM--LQPDN 473
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 172/336 (51%), Gaps = 16/336 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ A++ + MR G P T +L CA G +H +K
Sbjct: 338 VIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWI 397
Query: 61 LDCDE-------FVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGN 111
L+ DE V +L+++Y C A +FD IP D++VV+WT +I G G
Sbjct: 398 LNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 457
Query: 112 LEEAINMFRRLLHRG--LKPDSFSIVRVLTACTQLGDLSTAKWIHGYV-NEAGKGRNVFV 168
EA+ +F ++L + P++F+I L AC +LG L + IH YV + +FV
Sbjct: 458 ANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFV 517
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
A L+D+Y+K G+++ AR VFD M +++ VSW+S++ GY +G +EAL +FY MQ+ L
Sbjct: 518 ANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGL 577
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERN-EFLSNPVLGTTLIDMYAKCGRMAQAC 287
P+ T V VL AC+ G ++ G+ + M ++ + ++D+ ++ GR+ +A
Sbjct: 578 VPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAM 637
Query: 288 KVFREMKDKDQ-VVWNAVVSGLSMNGYVKVAFGVFG 322
++ R M K VW A++S + Y V G +
Sbjct: 638 ELIRGMPMKPTPAVWVALLSACRV--YANVELGEYA 671
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 11/274 (4%)
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM-PEKDIVSW- 200
Q L++A+ IH + G + T ++ +Y + KA V ++ P V W
Sbjct: 38 QCKSLASAELIHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWW 94
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+ +I+ GF ++ L ++ MQR +P++YT VL AC + + G + +
Sbjct: 95 NQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFA 154
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK---DQVVWNAVVSGLSMNGYVKVA 317
+ F N +G L+ MY +CG A +VF EM+++ D V WN++V+ G A
Sbjct: 155 SGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRA 214
Query: 318 FGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
+F ++ E GI+P+ + V +L C G G+Q R L + +V
Sbjct: 215 MKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRS-GLFEDVFVGNAVV 273
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
D+ + G ++EA+++ + M ++ + + W A++ G
Sbjct: 274 DMYAKCGMMEEANKVFERMKVK-DVVSWNAMVTG 306
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/626 (37%), Positives = 353/626 (56%), Gaps = 22/626 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK-A 59
MI V A+E M + G P TF L AC+R LG H++++K A
Sbjct: 253 MISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDA 312
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAIN 117
L + FV ++L+++Y +A A +VFD +P+ + + W A+I GY G EEA+
Sbjct: 313 DLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALE 372
Query: 118 MFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F R+ G P ++ VL AC + + + +HGYV + G N FV +L+D+Y
Sbjct: 373 LFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMY 432
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ------------ 224
A+ G M+ ARR+F + +D+VSW+++I G G EA + MQ
Sbjct: 433 ARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTT 492
Query: 225 ----RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
P T++ +L CA+L A G + R+ S+ +G+ L+DMYAKC
Sbjct: 493 EEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKC 552
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGL 339
G +A + VF + ++ + WN ++ M+G A +F ++ G PN TF+
Sbjct: 553 GCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAA 612
Query: 340 LCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM-PME 398
L C+H+GLVD G + F+ M R + P + + C+VD+LGR+G+LDEA+ +I SM P E
Sbjct: 613 LAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGE 672
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIR 458
W +LL CRLH+ +L E +L LEP + +YVLL NIYSA+ W+ + +R
Sbjct: 673 QQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVR 732
Query: 459 SMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTD 518
M +G+ K GCSW+E+DG +H F+ G++SHP S ++++ +D L +++ G+ P T
Sbjct: 733 VRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTS 792
Query: 519 HVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKIT 578
VL D++E+EK L HSEKLA+AFGL+ P IR+AKNLRVC DCHEA K +SK+
Sbjct: 793 CVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMV 852
Query: 579 GREIIVRDNNRFHCFIEGSCSCKDFW 604
GR+I++RD RFH F +GSCSC D+W
Sbjct: 853 GRDIVLRDVRRFHHFRDGSCSCGDYW 878
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 176/366 (48%), Gaps = 25/366 (6%)
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
V +LL Y CG L AL +F ++ VS+ ++IS E A++ R +L
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161
Query: 125 RGLKP-DSFSIVRVLTACTQL-GD--LSTAKWIHGYVNEAG---KGRNVFVATSLVDLYA 177
G SF++V VL AC+ L GD + H + + G +GR F +L+ +YA
Sbjct: 162 EGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYA 221
Query: 178 KCGNMEKARRVFDQMPEK------DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
+ G ++ A+ +F D+V+W++MI G EA+++ Y+M ++P+
Sbjct: 222 RLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPD 281
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERN-EFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
T L AC+ L L LG + + ++ + +N + + L+DMYA ++A A +VF
Sbjct: 282 GVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVF 341
Query: 291 REMKDKDQVV--WNAVVSGLSMNGYVKVAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHA- 346
+ + + + WNA++ G + G + A +F ++E + G P+ T G+L C +
Sbjct: 342 DMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSE 401
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV-WG 405
G + + R + +++ ++D+ R G++D A + ++P +V W
Sbjct: 402 GFAGKEAMHGYVVKRGMAGNRFVQN--ALMDMYARLGEMDVARRIFAM--IDPRDVVSWN 457
Query: 406 ALLAGC 411
L+ GC
Sbjct: 458 TLITGC 463
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/551 (42%), Positives = 331/551 (60%), Gaps = 33/551 (5%)
Query: 87 VFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+F+ DK NV SW ++I+ G+ EA+ F + LKP+ + + +C+ L
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR------------------- 186
DL + + H G ++FV+++LVD+Y+KCG + AR
Sbjct: 91 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150
Query: 187 ------------RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYY 233
RVFD M E+D++SW+S+I YA NG E++++F+ M ++ +
Sbjct: 151 GYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAV 210
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T+ VL ACA G+ LG + + SN +GT++IDMY KCG++ A K F M
Sbjct: 211 TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 270
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
++K+ W+A+V+G M+G+ K A VF ++ G++PN TFV +L C+HAGL++EG
Sbjct: 271 REKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGW 330
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+F +MS F + P +EHYGCMVDLLGR+G L EA +LIK M + P+ +VWGALL CR+
Sbjct: 331 HWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRM 390
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
HK DL E +L L+P N G YVLLSNIY+ + +W D ++R +M + G+ K G S
Sbjct: 391 HKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFS 450
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
V++ G VH FLVGD HP EKIY L++L+ KL+ G+VP VL D+ EEK+ L
Sbjct: 451 LVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVL 510
Query: 534 ACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF 593
HSEKLA+AFG++ T P I I KNLRVCGDCH AIK ISKI REI+VRD+ RFH F
Sbjct: 511 RVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHF 570
Query: 594 IEGSCSCKDFW 604
+G CSC D+W
Sbjct: 571 RDGLCSCGDYW 581
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 174/339 (51%), Gaps = 36/339 (10%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ ++SMR P TFP +K+C+ D G ++H + G + D FV ++L++
Sbjct: 60 ALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVD 119
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-------- 125
+Y CG L DA +FD+I +N+VSWT++I+GY+ + A+ +F + R
Sbjct: 120 MYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSI 179
Query: 126 -------GLKPDSFSIVR-----------------VLTACTQLGDLSTAKWIHGYVNEAG 161
G+ +S I VL AC G K IH V + G
Sbjct: 180 IAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMG 239
Query: 162 KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
NVFV TS++D+Y KCG +E AR+ FD+M EK++ SWS+M+ GY +G KEAL++FY
Sbjct: 240 LESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFY 299
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAK 279
M +KP Y T V VL+AC+ G LE G W +EF P + ++D+ +
Sbjct: 300 EMNMAGVKPNYITFVSVLAACSHAGLLEEG-WHWFKAMSHEFDVEPGVEHYGCMVDLLGR 358
Query: 280 CGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
G + +A + + MK + D VVW A++ M+ V +
Sbjct: 359 AGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLG 397
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I + N ++E ++ M +G + N T VL ACA +LG H ++K
Sbjct: 179 IIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKM 238
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL+ + FV TS++++Y CG + A K FD + +KNV SW+A+++GY G+ +EA+ +F
Sbjct: 239 GLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVF 298
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+KP+ + V VL AC+ G L +G + F A S
Sbjct: 299 YEMNMAGVKPNYITFVSVLAACSHAGLLE-------------EGWHWFKAMS-------- 337
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
FD P + + M+ G+ KEA D+ M+ L+P++ +L
Sbjct: 338 -------HEFDVEP--GVEHYGCMVDLLGRAGYLKEAFDLIKGMK---LRPDFVVWGALL 385
Query: 240 SACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
AC ++LG + A E + N L ++YA GR
Sbjct: 386 GACRMHKNVDLGEISARKLFELDP--KNCGYYVLLSNIYADAGR 427
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/563 (41%), Positives = 338/563 (60%), Gaps = 31/563 (5%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+L++ YV G +++A ++FD +P ++VVSW ++SGY G++ EA RRL
Sbjct: 72 NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEA----RRLFDAAPV 127
Query: 129 PDSFSIVRVLTACTQLGDLSTAK-------------W---IHGYV-----NEAGK----- 162
D F+ V++ Q G L A+ W + Y+ +EA +
Sbjct: 128 RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 187
Query: 163 -GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
RNV +++ YA+ G +E+A+ VFD MP+KD VSW++M+ Y+ G +E L +F
Sbjct: 188 PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFI 247
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
M R VLS CA + ALE G+ + R + +G L+ MY KCG
Sbjct: 248 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCG 307
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
M A F EM+++D V WN +++G + +G+ K A +F + +P+ T VG+L
Sbjct: 308 NMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLA 367
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C+H+GLV++G +F SM F +T EHY CM+DLLGR+G+L EAH+L+K MP EP++
Sbjct: 368 ACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDS 427
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMM 461
+WGALL R+H+ +L ++ LEP N+G YVLLSNIY++S KW DA K+R MM
Sbjct: 428 TMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMM 487
Query: 462 GDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVL 521
++G++K+ G SW+EV VH F GD HP EKIY+ L++L ++K AG+V TD VL
Sbjct: 488 EERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVL 547
Query: 522 FDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGRE 581
D+EEEEK++ L HSEKLA+A+G++ P IR+ KNLRVCGDCH A K IS I GR
Sbjct: 548 HDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRL 607
Query: 582 IIVRDNNRFHCFIEGSCSCKDFW 604
I++RD+NRFH F GSCSC D+W
Sbjct: 608 ILLRDSNRFHHFRGGSCSCGDYW 630
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 162/358 (45%), Gaps = 32/358 (8%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D +++ + + G ++ A FD P+K+ VSW +++ Y+ G +EEA R L
Sbjct: 5 DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEA----RGLF 60
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
+ + D S +++ Q G +S A+ + + GR+V +V YA+ G+M
Sbjct: 61 NSRTEWDVISWNALMSGYVQWGKMSEARELFDRM----PGRDVVSWNIMVSGYARRGDMV 116
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
+ARR+FD P +D+ +W++++ GYA NG +EA +F M N
Sbjct: 117 EARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERN--------------AV 162
Query: 244 SLGALELGVWASSFMERNEFL------SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
S A+ M+ + L N T++ YA+ G + +A VF M KD
Sbjct: 163 SWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKD 222
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V W A+++ S G + +F ++ +CG N + F +L C ++ G Q
Sbjct: 223 AVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHG 282
Query: 358 SMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ R + + + + ++ + + G +++A + M E + + W ++AG H
Sbjct: 283 RLIRAGYGVGCFVGN--ALLAMYFKCGNMEDARNAFEEME-ERDVVSWNTMIAGYARH 337
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 5/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + C + ++ + M G F VL CA + G++ H +++AG
Sbjct: 229 MLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAG 288
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
FV +LL +Y CG + DA F+++ +++VVSW +I+GY G +EA+ +F
Sbjct: 289 YGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFD 348
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ KPD ++V VL AC+ G + + + ++ G T ++DL +
Sbjct: 349 MMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRA 408
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFP---KEALDMFYNMQREN 227
G + +A + MP E D W +++ + P + A + + ++ EN
Sbjct: 409 GRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPEN 460
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/578 (40%), Positives = 352/578 (60%), Gaps = 4/578 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + + +L+A R +L + H+ ++ +G C F+ T LLNL G ++ ++
Sbjct: 10 PHSPAYNLLLQAGPR---LKLLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQI 66
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLE-EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
F +P+ + +T++I N ++ + R++ + P +++ V+ +C L
Sbjct: 67 FLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVA 126
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
L + IHG+V G G +V+V T+L+ Y KCG + AR+VFD+M ++ +V+W+SMI G
Sbjct: 127 LRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISG 186
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
Y NGF KEA+ +F M+ ++P T V VLSACA LGA LG W + N N
Sbjct: 187 YEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLN 246
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
VLGT+LI+MY +CG +++A +VF MK+++ V W A++SG NGY A +F ++ +
Sbjct: 247 VVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRR 306
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLD 386
G+ PN TFV +L C HAGLV+EGR+ F SM + L P +EH+ C+VD+LGR+G LD
Sbjct: 307 NGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLD 366
Query: 387 EAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYS 446
EA+ IK + EP +W A+L C++HK L V +A EP N +YV+LSNIY+
Sbjct: 367 EAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYA 426
Query: 447 ASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELAT 506
+ + + +R M K ++K G S +++D + F +GD SH + +IY LD+L
Sbjct: 427 LAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDKSHTETNEIYHYLDQLMR 486
Query: 507 KLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
K + AG+V +D V+ ++EEEE++Y L HSEKLA+AFGL+ T+ VIRI KNLR+C D
Sbjct: 487 KCREAGYVTVSDSVMHELEEEEREYALGYHSEKLAIAFGLLKTSRGTVIRIVKNLRMCED 546
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CH AIK IS I+ REIIVRD RFH F GSCSC D+W
Sbjct: 547 CHSAIKYISVISNREIIVRDKLRFHHFKNGSCSCLDYW 584
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 175/302 (57%), Gaps = 4/302 (1%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
+++ FY M P+N+TF V+K+CA + G H ++ G D +V+T+L+
Sbjct: 94 YSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALM 153
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
+ Y CG L +A KVFD + D++VV+W ++ISGY G +EAI +F R+ G++P+S
Sbjct: 154 SFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSA 213
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ V VL+AC LG W+H Y G NV + TSL+++Y +CGN+ KAR VFD M
Sbjct: 214 TFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSM 273
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
E+++V+W++MI GY +NG+ +A+++F+ M+R L P T V VLSACA G + G
Sbjct: 274 KERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGR 333
Query: 253 WASSFMERNEFLSNPVL--GTTLIDMYAKCGRMAQACKVFREMKDKDQ-VVWNAVVSGLS 309
M R E+ P + L+DM + G + +A +E+ ++ +W A++
Sbjct: 334 RVFESM-REEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACK 392
Query: 310 MN 311
M+
Sbjct: 393 MH 394
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 130/296 (43%), Gaps = 34/296 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N + AI ++ M+ G P + TF VL ACA F LG H V G
Sbjct: 183 MISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNG 242
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + + TSL+N+Y CG ++ A +VFD + ++NVV+WTA+ISGY G +A+ +F
Sbjct: 243 LDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFH 302
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GL P+S + V VL+AC G VNE GR VF
Sbjct: 303 EMRRNGLLPNSITFVAVLSACAHA----------GLVNE---GRRVF------------- 336
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
E R + +PE + ++ G EA + + E + M+G
Sbjct: 337 --ESMREEYRLVPE--VEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLG--- 389
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
AC LG + +E NP L ++YA GRM Q V M K
Sbjct: 390 ACKMHKNFGLGAQVAEHRLASE-PGNPAHYVILSNIYALAGRMDQVEMVRDNMIRK 444
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/606 (39%), Positives = 357/606 (58%), Gaps = 41/606 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGF-LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRG +D +A++ + MR + LP +F+F F+LKA A G++ H L V
Sbjct: 76 LIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAVGY 135
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD FV T+L+++Y C L A KVFD++ + N+V+W AI++ +++A +F
Sbjct: 136 GLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVF 195
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R C + +L++ W N+ +A Y K
Sbjct: 196 R--------------------CMPIRNLTS--W------------NIMLAG-----YTKA 216
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ AR VF +MP KD VSWS+MI G+A NG +A F ++RE ++P ++ GVL
Sbjct: 217 GELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVL 276
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACA GA E G F+E++ FL + LID Y+KCG + A VF M + V
Sbjct: 277 SACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAV 336
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W A+++G++M+GY + A +F ++E+ I+P+ TF+ +L C+HAGLVD G +F+ M
Sbjct: 337 SWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRM 396
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + P+IEHYGCMVDL GR+G+L +A++ + MP+ PN IVW LL C +H L
Sbjct: 397 VNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYL 456
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A V QL L+P NSG++VLLSNIY+ + KW D A +R M + ++K G S +EV+
Sbjct: 457 AGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNR 516
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
+++ F+ G+ + ++ + + KL E+ ++L+ G+VP VL DIE EEK+ ++ HSE
Sbjct: 517 IIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSE 576
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA+AFG+ IR+ KNLR+C DCH +KLISK+ EI+VRD +RFH F GSC
Sbjct: 577 KLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSC 636
Query: 599 SCKDFW 604
SC+D+W
Sbjct: 637 SCRDYW 642
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 17/237 (7%)
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK-PEYYTMVGVL 239
++ ARR+F + D+ ++++I+G + + P AL +F M+R+++ P+ ++ +L
Sbjct: 54 SLHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLL 113
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A A+ AL G+ S+ +GTTLI MYA+C + A KVF EM + + V
Sbjct: 114 KAAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIV 173
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA+V+ VK A VF +C N ++ +L G T AG + R+ F M
Sbjct: 174 AWNAIVAACFRCEGVKDAEQVF----RCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKM 229
Query: 360 SRVFSLTPMIE--HYGCMVDLLGRSGQLDEAHELIKSMP---MEPNAIVWGALLAGC 411
P+ + + M+ +G ++A + + M PN + +L+ C
Sbjct: 230 -------PLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSAC 279
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/607 (38%), Positives = 354/607 (58%), Gaps = 38/607 (6%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC---GYLADALKVFD 89
P C+++ + + + H+ ++K GL D + T L+ + +L A VFD
Sbjct: 46 MPNTETRCSKQEELK---QIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFD 102
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+ W +I G+ E ++ +++R+L ++++ +L AC+ L L
Sbjct: 103 GFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEE 162
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP---------------- 193
IH + + G +V+ SL++ YA GN + A +FD++P
Sbjct: 163 TTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAK 222
Query: 194 ---------------EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
EK+ +SW++MI GY G KEAL +F+ MQ +++P+ ++
Sbjct: 223 AGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANA 282
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
LSACA LGALE G W S++ + + VLG LIDMYAKCG M +A +VF+ ++ K
Sbjct: 283 LSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSV 342
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
W A++SG + +G+ + A F +++K GI+PN TF +L C++ GLV+EG+ F +
Sbjct: 343 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYN 402
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M R ++L P IEHYGC+VDLL R+G LDEA I+ MP++PNA++WGALL CR+HK +
Sbjct: 403 MERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIE 462
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E + LIA++P++ G YV +NI++ KW+ AA+ R +M ++G+ K+ GCS + ++
Sbjct: 463 LGEEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLE 522
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP-TTDHVLFDIEEEEKQYFLACHS 537
G HEFL GD SHP EKI SK + KL+ G+VP D +L ++++E++ + HS
Sbjct: 523 GTTHEFLAGDRSHPEIEKIQSKWKIMRRKLEENGYVPELEDMLLDLVDDDERETIVHQHS 582
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EKLA+ +GLI T P IRI KNLRVC DCH+ KLISKI R+I++RD RFH F +G
Sbjct: 583 EKLAITYGLIKTKPGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGK 642
Query: 598 CSCKDFW 604
CSC D+W
Sbjct: 643 CSCGDYW 649
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 174/350 (49%), Gaps = 33/350 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRGF +D + ++ Y M +TFP +LKAC+ + + H+ I K G
Sbjct: 115 MIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLG 174
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP---------------------------- 92
+ D + SL+N Y G A +FD IP
Sbjct: 175 YENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFR 234
Query: 93 ---DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+KN +SWT +ISGY+ G +EA+ +F + + ++PD+ S+ L+AC QLG L
Sbjct: 235 KMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 294
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
KWIH Y+ + + + L+D+YAKCG+M +A VF + K + +W+++I GYA
Sbjct: 295 GKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAY 354
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+G +EA+ F MQ+ +KP T VL+AC+ G +E G MER+ L +
Sbjct: 355 HGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIE 414
Query: 270 GT-TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
++D+ ++ G + +A + +EM K + V+W A++ ++ +++
Sbjct: 415 HYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 464
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/610 (39%), Positives = 371/610 (60%), Gaps = 7/610 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+ G+ ++ + HAI M++ G L P T +L A+ G H+ ++A
Sbjct: 171 MLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRA 230
Query: 60 GLDCDE---FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
LD +E + T+LL++Y C +L A +VF + +N V+W+A+I G++ + EA
Sbjct: 231 YLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAF 290
Query: 117 NMFRRLLHRGL-KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
N+F+ +L G+ + S+ L C L DL +H + ++G ++ SL+ +
Sbjct: 291 NLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSM 350
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
YAK G + +A +FD++ KD +S+ +++ GY NG +EA +F MQ N++P+ TM
Sbjct: 351 YAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATM 410
Query: 236 VGVLSACASLGALELGVWA-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
V ++ AC+ L AL+ G + S + R L + +LIDMYAKCGR+ + +VF +M
Sbjct: 411 VSLIPACSHLAALQHGRCSHGSVIIRGLALETSIC-NSLIDMYAKCGRIDLSRQVFDKMP 469
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+D V WN +++G ++G K A +F ++ G +P+ TF+ L+ C+H+GLV EG+
Sbjct: 470 ARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKH 529
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+F++M+ + + P +EHY CMVDLL R G LDEA++ I+SMP++ + VWGALL CR+H
Sbjct: 530 WFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIH 589
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K DL + V + L P +GN+VLLSNI+SA+ ++++AA++R + KG +K GCSW
Sbjct: 590 KNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSW 649
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+E++G +H F+ GD SHP S IY +LD + +K G+ T VL D+EEEEK+ L
Sbjct: 650 IEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKEKALL 709
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFG+++ I + KNLRVCGDCH AIK ++ + R IIVRD NRFH F
Sbjct: 710 YHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFK 769
Query: 595 EGSCSCKDFW 604
G CSC DFW
Sbjct: 770 NGQCSCGDFW 779
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 218/420 (51%), Gaps = 9/420 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + F AI+ Y SM P +TFPFVLKAC+ D G H+ G
Sbjct: 70 LIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVG 129
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D FV T+L++LY+ C A VF +P ++VV+W A+++GY N G AI
Sbjct: 130 LHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLL 189
Query: 121 RLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN---VFVATSLVDLY 176
+ R GL+P++ ++V +L Q G L +H Y A +N V + T+L+D+Y
Sbjct: 190 DMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMY 249
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
AKC ++ A RVF M ++ V+WS++I G+ EA ++F +M E + T V
Sbjct: 250 AKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSV 309
Query: 237 G-VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
L CASL L +G + + ++ ++ G +L+ MYAK G + +A +F E+
Sbjct: 310 ASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAI 369
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
KD + + A++SG NG + AF VF +++ C +QP+ T V L+ C+H + GR
Sbjct: 370 KDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCS 429
Query: 356 FNS-MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
S + R +L I ++D+ + G++D + ++ MP + + W ++AG +H
Sbjct: 430 HGSVIIRGLALETSI--CNSLIDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIH 486
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 188/363 (51%), Gaps = 7/363 (1%)
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
L ++ G LA A +VFD IP + ++ A+I Y G AI+++R +L+ + P+
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++ VL AC+ L DL + IH + G ++FV+T+L+DLY +C A VF +
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALEL 250
MP +D+V+W++M+ GYA++G A+ +MQ R L+P T+V +L A GAL
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQ 219
Query: 251 GVWASSFMERNEFLSNP---VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
G ++ R N ++GT L+DMYAKC + AC+VF M +++V W+A++ G
Sbjct: 220 GTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGG 279
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQ-PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
+ + AF +F + G+ + + L C + G Q +++ +
Sbjct: 280 FVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKS-GIH 338
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
+ ++ + ++G ++EA L + ++ + I +GALL+G + K + A V +
Sbjct: 339 ADLTAGNSLLSMYAKAGLINEATMLFDEIAIK-DTISYGALLSGYVQNGKAEEAFLVFKK 397
Query: 427 LIA 429
+ A
Sbjct: 398 MQA 400
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/491 (46%), Positives = 320/491 (65%), Gaps = 11/491 (2%)
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L GL D F +L + GDLS+A I + +++ S+V+ YAK G
Sbjct: 86 QILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIF----DESVSKDLPAWNSVVNAYAKAG 141
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-----LKPEYYTM 235
+ AR++FD+MPE++++SWS +I GY G KEALD+F MQ + P +TM
Sbjct: 142 LINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTM 201
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
VLSAC LGALE G W S++++ + VLGT LIDMYAKCG + +A +VF +
Sbjct: 202 STVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGS 261
Query: 296 KDQV-VWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGR 353
K V ++A++ L+M G F VF ++ I PN TFVG+L C H GL+++G+
Sbjct: 262 KKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGK 321
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+F M+ F +TP I+HYGCMVDL GRSG + EA I SMPMEP+ ++WG+LL+G R+
Sbjct: 322 SYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 381
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
E L +LI L+P NSG YVLLSN+Y+ + +W + +IR M KGI+K+ GCS
Sbjct: 382 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCS 441
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
+VEV+GVVHEF+VGD S SE+IY+ L+E+ +L+ AG+V T VL D+EE++K+ L
Sbjct: 442 YVEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKEMAL 501
Query: 534 ACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF 593
+ HSEKLA+AF L+ T P +RI KNLR+CGDCH +K+ISK+ REI+VRD NRFH F
Sbjct: 502 SYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHF 561
Query: 594 IEGSCSCKDFW 604
+GSCSC+DFW
Sbjct: 562 SDGSCSCRDFW 572
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 187/352 (53%), Gaps = 44/352 (12%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
I Y MR+ P TFPF+L + LG R+H+ I+ GLD D FV+TSLLN+
Sbjct: 46 ISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 105
Query: 75 YVHCGYLADAL-------------------------------KVFDDIPDKNVVSWTAII 103
Y CG L+ AL K+FD++P++NV+SW+ +I
Sbjct: 106 YSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLI 165
Query: 104 SGYINEGNLEEAINMFRRL-LHRG----LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
+GY+ G +EA+++FR + L + + P+ F++ VL+AC +LG L KW+H Y++
Sbjct: 166 NGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYID 225
Query: 159 EAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM-PEKDIVSWSSMIQGYASNGFPKEAL 217
+ G ++ + T+L+D+YAKCG++E+A+RVFD + +KD+ ++S+MI A G E
Sbjct: 226 KYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECF 285
Query: 218 DMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSF-MERNEFLSNPVLGT--TL 273
+F M N+ P T VG+L AC G + G S F M EF P + +
Sbjct: 286 QVFSEMTTSNNINPNSVTFVGILGACVHRGLINKG--KSYFKMMTEEFGITPSIQHYGCM 343
Query: 274 IDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+D+Y + G + +A M + D ++W +++SG M G +K G +L
Sbjct: 344 VDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRL 395
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/649 (37%), Positives = 379/649 (58%), Gaps = 46/649 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N ++ + +M ++G P +L A + FQ + H +V++G
Sbjct: 309 LLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSG 368
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + FV SL+ LY CG L DA+K+F + ++VV W+++I+ Y G EA+ +F
Sbjct: 369 FNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFD 428
Query: 121 RLLHR----------GLKPDSFSIVRVLTACTQLGDL----------STAKWI------- 153
+++ ++P + + T+CT + + +W+
Sbjct: 429 QMIQVMQGITSCYQISMQPQVQPPLAI-TSCTLATHIPWKVKAFYMRAHFRWLGHFWEIF 487
Query: 154 HGYVNEAG--KGRNVF---------VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
Y +A N+F + T +Y ++ A VF+ +P W+
Sbjct: 488 PTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNV 547
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPE-------YYTMVGVLSACASLGALELGVWAS 255
MI+G+A++G +L+++ M + LKP+ +++ VL AC +LGAL G W
Sbjct: 548 MIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFH 607
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
S++ + F + ++ T ++DMY+KCG + A +F E KD V W+A+++ ++G+ +
Sbjct: 608 SYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGR 667
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A +F Q+ K G++P+ TF +L C+H+GL++EG+ +F M+ F + + +Y CM
Sbjct: 668 KAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACM 727
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNS 435
VDLLGR+GQL EA +LI++MP+EP+A +WG+LL CR+H DLAE + + L L+P ++
Sbjct: 728 VDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHA 787
Query: 436 GNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSE 495
G +VLLSNIY+A +WN+ K+R MM +G KI+G S VE D VH+F VGD SHP E
Sbjct: 788 GYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWE 847
Query: 496 KIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVI 555
K+Y+KL+ELA +K G+VP TD VL DIEEE K+ L+ HSE+LA+AFGLI T+P +
Sbjct: 848 KLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTL 907
Query: 556 RIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
RI KNLR+CGDCH AIKLISKI R I+VRD +RFH F +G CSC D+W
Sbjct: 908 RITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 191/422 (45%), Gaps = 60/422 (14%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
HS + K G+ D F T L +LY C L A KVFD+ P NV W + + Y E
Sbjct: 24 HSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQW 83
Query: 113 EEAINMFRRLL-HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVAT 170
EE + +F ++ G PD+F+I L AC L L K IHG+ + + G ++FV +
Sbjct: 84 EETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGS 143
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLK 229
+LV+LY+KCG M +A +VF++ D V W+SM+ GY N P+EAL +F M +
Sbjct: 144 ALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFD 203
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
+ + +L+ A G ++ S M + +S +T+I YA +A +
Sbjct: 204 GDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVIS----WSTMIACYANNEAANEALNL 259
Query: 290 FREMKD-----------------------------------KDQVVWNAVVSGLSMNGYV 314
F EM + KD V W A++SG + NG
Sbjct: 260 FHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMA 319
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG--------RQFFNSMSRVFSLT 366
+ GVF + GIQP+ V +L + G+ + R FN S VF
Sbjct: 320 YKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFN--SNVFVGA 377
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
+IE Y + G L +A +L K M + + ++W +++A +H + A + +Q
Sbjct: 378 SLIELY-------SKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIHGRGGEALEIFDQ 429
Query: 427 LI 428
+I
Sbjct: 430 MI 431
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 177/357 (49%), Gaps = 34/357 (9%)
Query: 2 IRGFVSNDCFQHAIEFYNSMR-NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+R + ++ + ++ M G P NFT P LKACA +LG H K
Sbjct: 74 LRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKND 133
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ D FV ++L+ LY CG + +ALKVF++ + V WT++++GY + EEA+ +F
Sbjct: 134 EIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALF 193
Query: 120 RRLLHRGLKPDSFSIVRVL------TACTQLGD-----------LSTAKWIHGYVNE--A 160
+++ +V L T C ++ +S + I Y N A
Sbjct: 194 SQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAA 253
Query: 161 GKGRNVF----------VATSLVDLYAKCG---NMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ N+F + ++V C N+E+ +++ KD+VSW +++ GY
Sbjct: 254 NEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGY 313
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A NG +++ +F NM + ++P+ +V +L+A + LG + + ++ R+ F SN
Sbjct: 314 AQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNV 373
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+G +LI++Y+KCG + A K+F+ M +D V+W+++++ ++G A +F Q+
Sbjct: 374 FVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQM 430
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 21/342 (6%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+V + AC +S +H V + G + F AT L LYAKC +++ AR+VFD+ P
Sbjct: 7 LVDLFQACNNGRSVSQ---LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP 63
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALELGV 252
++ W+S ++ Y +E L +F+ M P+ +T+ L ACA L LELG
Sbjct: 64 HPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGK 123
Query: 253 WASSFMERN-EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
F ++N E S+ +G+ L+++Y+KCG+M +A KVF E + D V+W ++V+G N
Sbjct: 124 VIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQN 183
Query: 312 GYVKVAFGVFGQ--LEKC--GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR--VFSL 365
+ A +F Q + C G P N+ + L G F+ M V S
Sbjct: 184 NDPEEALALFSQMVMMDCFDGDLPLVNSLLNLY---AKTGCEKIAANLFSKMPEKDVISW 240
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
+ MI C + + L+ HE+I+ EPN++ + L C + + + + +
Sbjct: 241 STMI---ACYANNEAANEALNLFHEMIEKR-FEPNSVTVVSALQACAVSRNLEEGKKI-- 294
Query: 426 QLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
IA+ LLS + R+M+ D GIQ
Sbjct: 295 HKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSD-GIQ 335
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/426 (50%), Positives = 301/426 (70%), Gaps = 1/426 (0%)
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + A +F +MP +D+VSW+SM+ YA G P EAL +F M+ +KP T+V +L
Sbjct: 162 GKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 221
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACA LGAL+ G+ +++ N N ++GT L+DMYAKCG+++ A +VF M+ KD +
Sbjct: 222 SACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 281
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN +++G++++G+VK A +F ++++ G++PN TFV +L C+HAG+VDEG++ + M
Sbjct: 282 AWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCM 341
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
S + + P +EHYGC++DLL R+G L+EA ELI +MPMEPN GALL GCR+H +L
Sbjct: 342 SSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNFEL 401
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E V +LI L+P +SG Y+LLSNIY+A+ KW+DA K+R++M GI K+ G S +E+ G
Sbjct: 402 GEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKG 461
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAA-GFVPTTDHVLFDIEEEEKQYFLACHSE 538
+VH F+ GD SHP S KIY KL+E+ T+LK+A G T VL D+EEE+K++ L HSE
Sbjct: 462 MVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGHSADTGDVLLDMEEEDKEHALPVHSE 521
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA+A+GL+ K+ IRI KNLRVC DCH KLISK+ GREIIVRD NRFH F +G C
Sbjct: 522 KLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRFHHFEDGEC 581
Query: 599 SCKDFW 604
SC DFW
Sbjct: 582 SCLDFW 587
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 140/258 (54%), Gaps = 8/258 (3%)
Query: 63 CDEF-VKTSLLNLYVH-----CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
C+E V +L +++H G DA +F ++P ++VVSW ++++ Y G EA+
Sbjct: 140 CNEVGVDKGVLKVWMHNNKNTFGKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEAL 199
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F ++ G+KP ++V +L+AC LG L +H Y+N+ N V T+LVD+Y
Sbjct: 200 ALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMY 259
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
AKCG + A +VF+ M KD+++W+++I G A +G KEA +F M+ ++P T V
Sbjct: 260 AKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFV 319
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK- 294
+LSAC+ G ++ G M + + V +ID+ A+ G + +A ++ M
Sbjct: 320 AMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPM 379
Query: 295 DKDQVVWNAVVSGLSMNG 312
+ + A++ G ++G
Sbjct: 380 EPNPCALGALLGGCRIHG 397
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 1/181 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ ++ MR G PT T +L ACA G+ H+ I ++ + V T+L++
Sbjct: 198 ALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVD 257
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG ++ A +VF+ + K+V++W II+G G+++EA +F+ + G++P+ +
Sbjct: 258 MYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDIT 317
Query: 134 IVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
V +L+AC+ G + K + + G V ++DL A+ G +E+A + M
Sbjct: 318 FVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTM 377
Query: 193 P 193
P
Sbjct: 378 P 378
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/600 (38%), Positives = 360/600 (60%), Gaps = 11/600 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGV-------RS-HSLIVKAGLDCD- 64
++ ++ M +E P + T V +AC+ +LG RS H +++ +D +
Sbjct: 475 GLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPEL 534
Query: 65 EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
+F+ +L+ LY G L D KVF+ I +K ++SW +IS + G EEA+ +F ++
Sbjct: 535 DFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQT 594
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
+GL PDS+S+ L+AC + IHGY+ + G N FV +L+D+YAKCG +
Sbjct: 595 QGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGN-FNDFVQNALIDMYAKCGFVHS 653
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
A ++F+++ EK +V+W+SMI G++ NG+ EA+ +F M +K + T + V+ AC+
Sbjct: 654 ANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSH 713
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
LG LE G W + + L T L DMY+KCG + A VF M ++ V W+ +
Sbjct: 714 LGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVM 773
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
++G M+G + +F Q+ GI+PN TF+ +L C+HAG V+EG+ +FNSMS F
Sbjct: 774 IAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FG 832
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ P +H+ CMVDLL R+G L+ A+++I S+P N+ +WGALL GCR+HK+ D+ + +
Sbjct: 833 VEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIE 892
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
L+ ++ ++G Y LLSNIY+ W+ K+RSMM KG++K+ G S +E+D ++ F
Sbjct: 893 KNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRF 952
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
GD SH ++ IY L+ + + A + D+ + + K+ + HSEKLA+AF
Sbjct: 953 GPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAF 1012
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
G+I T P +RI+KNLRVC DCH K+ SKITGREII+RD NRFHCF GSCSC D+W
Sbjct: 1013 GIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 1072
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 204/435 (46%), Gaps = 65/435 (14%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ + GL T L+ Y G + +VFD P + W +I Y+ G
Sbjct: 368 HAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFF 427
Query: 113 EEAI---------------------------------------------NMFRRLLHRGL 127
EEA+ +MF +++ +
Sbjct: 428 EEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISEAV 487
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKW--------IHGYV-NEAGKGRNVFVATSLVDLYAK 178
+PDS +++ V AC++LG L + +HG+V A F+ +L++LYA
Sbjct: 488 EPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYAD 547
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
GN+ +VF+ + EK I+SW+++I + NG P+EAL +F MQ + L P+ Y++
Sbjct: 548 TGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASS 607
Query: 239 LSACASLGALELGVWASSFMER----NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
LSAC ++ +LG ++ + N+F+ N LIDMYAKCG + A K+F ++K
Sbjct: 608 LSACGTISFSQLGAQIHGYIIKTGNFNDFVQN-----ALIDMYAKCGFVHSANKMFEKIK 662
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+K V WN+++ G S NGY A +F Q+ ++ + TF+ ++ C+H G +++G+
Sbjct: 663 EKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKW 722
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + ++ L + D+ + G+L AH + M E + + W ++AG +H
Sbjct: 723 VHHKLI-MYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMS-ERSIVSWSVMIAGYGMH 780
Query: 415 KKTDLAEHVLNQLIA 429
+ + + NQ++
Sbjct: 781 GQINATISLFNQMLG 795
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 174/319 (54%), Gaps = 6/319 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F N + A+ + M+ +G +P +++ L AC QLG + H I+K G
Sbjct: 572 LISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG 631
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ ++FV+ +L+++Y CG++ A K+F+ I +K++V+W ++I G+ G EAI +F
Sbjct: 632 -NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFD 690
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ +K D + + V+ AC+ LG L KW+H + G ++ ++ T+L D+Y+KCG
Sbjct: 691 QMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCG 750
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A VFD+M E+ IVSWS MI GY +G + +F M +KP T + +LS
Sbjct: 751 ELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILS 810
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ GA+E G F +EF P ++D+ ++ G + A ++ + +
Sbjct: 811 ACSHAGAVEEGKLY--FNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPAN 868
Query: 298 QVVWNAVVSGLSMNGYVKV 316
+W A+++G ++ + +
Sbjct: 869 SSIWGALLNGCRIHKRIDI 887
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 140/331 (42%), Gaps = 61/331 (18%)
Query: 136 RVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
R LT+ + +T +H ++ G R+ +T L++ YA+ G E ++RVFD P+
Sbjct: 350 RSLTSHKRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKP 409
Query: 196 DIVSWSSMIQGYASNGFPKEA--------------------------------------- 216
D W +I+ Y GF +EA
Sbjct: 410 DSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKN 469
Query: 217 ------LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS--------SFMERNE 262
LDMF M E ++P+ TM+ V AC+ LG+L LG F+ R
Sbjct: 470 GQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRA 529
Query: 263 FLSNP---VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
+P LG L+++YA G + KVF +K+K + WN ++S + NG + A
Sbjct: 530 M--DPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALL 587
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F Q++ G+ P+ + L C G Q + + + +++ ++D+
Sbjct: 588 LFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMY 645
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ G + A+++ + + E + + W +++ G
Sbjct: 646 AKCGFVHSANKMFEKIK-EKSLVTWNSMICG 675
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/542 (42%), Positives = 342/542 (63%), Gaps = 9/542 (1%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D +T++++ Y G LA+A ++FD++P +NV+SWT +ISGY+ G ++ A R+L
Sbjct: 170 DVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVA----RKLF 225
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
+ + S +L TQ G + A + +A + V +++ + + G +
Sbjct: 226 EVMPEKNEVSWTAMLMGYTQGGRIEEASELF----DAMPVKAVVACNAMILGFGQNGEVA 281
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
KAR+VFDQ+ EKD +WS+MI+ Y GF EAL++F MQRE ++ + +++ VLS CA
Sbjct: 282 KARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCA 341
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
SL +L+ G + + +++F S+ + + LI MY KCG + +A ++F KD V+WN+
Sbjct: 342 SLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNS 401
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++G + +G V+ A VF ++ G+ +G TFVG+L C++ G V EG + F SM +
Sbjct: 402 IITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKY 461
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ P EHY CMVDLLGR+G +++A +LI+ MP+E +AI+WGALL CR H +LAE
Sbjct: 462 LVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVA 521
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
+L+ LEP N+G Y+LLSNIY++ +W D A++R M K + K GCSW+EV+ VH
Sbjct: 522 AKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHM 581
Query: 484 FLVG-DNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
F G HP I L++L L+ AG+ P + VL D++EEEK L HSE+LA+
Sbjct: 582 FTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAV 641
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
AFGL+ IR+ KNLRVCGDCH AIKLI+KITGREII+RD NRFH F +G CSC+D
Sbjct: 642 AFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRD 701
Query: 603 FW 604
+W
Sbjct: 702 YW 703
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 174/368 (47%), Gaps = 40/368 (10%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++ YV +++A K FD +P++NVVSWTA++ GY+ EG + EA +F ++ + +
Sbjct: 84 LISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNV--- 140
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S +L Q+ + A+ + + ++V T+++ Y + G + +AR +FD
Sbjct: 141 -VSWTVMLGGLIQVRRIDEARGLFDIM----PVKDVVARTNMISGYCQEGRLAEARELFD 195
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+MP ++++SW++MI GY NG A +F M +N ++G A EL
Sbjct: 196 EMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASEL 255
Query: 251 GVWASSFMERNEFLSNPVLGTT----LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
F + PV +I + + G +A+A +VF ++++KD W+A++
Sbjct: 256 ------------FDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIK 303
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM------S 360
G+ A +F +++ G+Q N + + +L C +D GRQ + S
Sbjct: 304 VYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDS 363
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV-WGALLAGCRLHKKTDL 419
VF + +I Y + G L +A ++ P IV W +++ G H +
Sbjct: 364 DVFVASVLITMY-------VKCGDLVKARQIFDR--FSPKDIVMWNSIITGYAQHGLVEE 414
Query: 420 AEHVLNQL 427
A V +++
Sbjct: 415 ALQVFHEM 422
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 154/346 (44%), Gaps = 71/346 (20%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
S + Y G + A +VFD++PDK +VSW ++++GY EA +F ++ R
Sbjct: 21 SQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER---- 76
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
+T W L+ Y K + +AR+ F
Sbjct: 77 ------------------NTVSW-----------------NGLISGYVKNRMVSEARKAF 101
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D MPE+++VSW++M++GY G EA +F+ M +N V+S LG L
Sbjct: 102 DTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKN----------VVSWTVMLGGL- 150
Query: 250 LGVWASSFME-RNEFLSNP----VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
+ E R F P V T +I Y + GR+A+A ++F EM ++ + W +
Sbjct: 151 --IQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTM 208
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
+SG NG V VA +F + + N ++ +L G T G ++E + F++M
Sbjct: 209 ISGYVQNGQVDVARKLFEVMP----EKNEVSWTAMLMGYTQGGRIEEASELFDAM----- 259
Query: 365 LTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
P+ C M+ G++G++ +A ++ + E + W A++
Sbjct: 260 --PVKAVVACNAMILGFGQNGEVAKARQVFDQI-REKDDGTWSAMI 302
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 22/242 (9%)
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
S + YA+ G +E ARRVFD+MP+K IVSW+SM+ GY N P+EA +F M N
Sbjct: 21 SQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNT-- 78
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ G++S + A M N V T ++ Y + G +++A +F
Sbjct: 79 --VSWNGLISGYVKNRMVSEARKAFDTMPER----NVVSWTAMVRGYVQEGLVSEAETLF 132
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+M +K+ V W ++ GL + A G+F + + N ++ G G +
Sbjct: 133 WQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTN----MISGYCQEGRLA 188
Query: 351 EGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
E R+ F+ M R V S T MI Y ++GQ+D A +L + MP E N + W A+L
Sbjct: 189 EARELFDEMPRRNVISWTTMISGY-------VQNGQVDVARKLFEVMP-EKNEVSWTAML 240
Query: 409 AG 410
G
Sbjct: 241 MG 242
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 10/198 (5%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+ + M+ EG + VL CA G + H+ +VK+ D D FV + L+
Sbjct: 313 EALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLI 372
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
+YV CG L A ++FD K++V W +II+GY G +EEA+ +F + G+ D
Sbjct: 373 TMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGV 432
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS-----LVDLYAKCGNMEKARR 187
+ V VL+AC+ G + I E+ K + + + +VDL + G + A
Sbjct: 433 TFVGVLSACSYTGKVKEGLEIF----ESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMD 488
Query: 188 VFDQMP-EKDIVSWSSMI 204
+ +MP E D + W +++
Sbjct: 489 LIQKMPVEADAIIWGALL 506
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/566 (39%), Positives = 331/566 (58%), Gaps = 32/566 (5%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
+++ Y+ G + +A ++FD +P +N +SW +I+GY G EEA+++ + L G+ P
Sbjct: 357 AMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLP 416
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME------ 183
S+ AC+ +G L T + +H +AG N +V +L+ +Y KC NME
Sbjct: 417 SLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVF 476
Query: 184 -------------------------KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALD 218
AR +FD M +D+VSW+++I YA EA++
Sbjct: 477 NRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVE 536
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
F M E+ KP + +LS C LG+ +LG + ++ S ++ L+ MY
Sbjct: 537 FFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYF 596
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
KCG A + KVF M+++D WN ++G + +G + A ++ +E G+ PN TFVG
Sbjct: 597 KCG-CADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVG 655
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
LL C+HAGLVDEG QFF SMSR + LTP++EHY CMVDLLGR+G + A + I MP+E
Sbjct: 656 LLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIE 715
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIR 458
P+ ++W ALL C++HK ++ +L EP N+GNYV+LSNIYS+ W + A++R
Sbjct: 716 PDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELR 775
Query: 459 SMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTD 518
+M +G+ K GCSW+++ VH F+ GD H E+I L +L T L+ G+VP T+
Sbjct: 776 KIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTE 835
Query: 519 HVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKIT 578
VL DI+EE+K+ L HSEKLA+A+GL+ T I+I KNLR+CGDCH IK +S +T
Sbjct: 836 FVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVT 895
Query: 579 GREIIVRDNNRFHCFIEGSCSCKDFW 604
R+I +RD NRFH F GSCSC DFW
Sbjct: 896 KRDIDIRDGNRFHHFRNGSCSCGDFW 921
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 166/339 (48%), Gaps = 36/339 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N + A++ ++ G LP+ + AC+ + G + HSL VKAG
Sbjct: 389 MIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAG 448
Query: 61 LDCDEFVKTSLLNLYVHC-------------------------------GYLADALKVFD 89
+ +V +L+++Y C L DA +FD
Sbjct: 449 CQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFD 508
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
++ ++VVSWT IIS Y +EA+ F+ +LH KP+S + +L+ C LG
Sbjct: 509 NMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKL 568
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ IH + G + VA +L+ +Y KCG + + +VFD M E+DI +W++ I G A
Sbjct: 569 GQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQ 627
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+G +EA+ M+ +M+ + P T VG+L+AC+ G ++ G M R+ L+ P+L
Sbjct: 628 HGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLT-PLL 686
Query: 270 G--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
++D+ + G + A K +M + D V+W+A++
Sbjct: 687 EHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALL 725
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 172/360 (47%), Gaps = 13/360 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V + + + M +EG P F VL A D + L++K G
Sbjct: 194 MISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTG 253
Query: 61 LDCDEFVKTSLLNLYVHCGYLAD-ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ D + TS+LN+Y D A+K FD + ++N +W+ +I+ + G ++ AI ++
Sbjct: 254 FESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY 313
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R + + S +LT + G ++ A+ + + + V +++ Y +
Sbjct: 314 GRDPVKSIP----SQTALLTGLARCGRITEARILFEQIPDP----IVVSWNAMITGYMQN 365
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +++A+ +FD+MP ++ +SW+ MI GYA NG +EALD+ + R + P ++
Sbjct: 366 GMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSF 425
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+ +GALE G S + N + LI MY KC M +VF M+ KD V
Sbjct: 426 LACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTV 485
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN+ ++ L N ++ A +F + + + ++ ++ A DE +FF +M
Sbjct: 486 SWNSFIAALVQNNMLEDARHIFDNM----LSRDVVSWTTIISAYAQAERGDEAVEFFKTM 541
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 180/396 (45%), Gaps = 50/396 (12%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D+ ++ + G L +A +VFD +P +++++W ++IS Y N G LE+A +F +
Sbjct: 32 DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS 91
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
++ + +L+ +LG + A+ + + E RN ++V Y + G++
Sbjct: 92 GGNVRTATI----LLSGYARLGRVLDARRVFDGMPE----RNTVAWNAMVSCYVQNGDIT 143
Query: 184 KARRVFDQMPEKDIVSWSSMIQGY--------ASNGF---PKEAL--------------- 217
ARR+FD MP +D+ SW+SM+ GY A N F P+ L
Sbjct: 144 MARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQ 203
Query: 218 -----DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
D+F M E P+ VLSA L L + + + F S+ V+GT+
Sbjct: 204 HGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTS 263
Query: 273 LIDMYAK-CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
++++Y + + A K F M ++++ W+ +++ LS G + A V+G+ I
Sbjct: 264 ILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPS 323
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
LL G G + E R F + P++ + M+ ++G +DEA EL
Sbjct: 324 Q----TALLTGLARCGRITEARILFEQIP-----DPIVVSWNAMITGYMQNGMVDEAKEL 374
Query: 392 IKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
MP N I W ++AG + +++ A +L L
Sbjct: 375 FDRMPFR-NTISWAGMIAGYAQNGRSEEALDLLQAL 409
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 174/367 (47%), Gaps = 23/367 (6%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
S++ Y H + DA +F +P +N+V+WT +ISGY+ + ++FR + H G P
Sbjct: 162 SMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASP 221
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK-CGNMEKARRV 188
D + VL+A T L DL + + V + G +V + TS++++Y + ++ A +
Sbjct: 222 DQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKF 281
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK--PEYYTMVGVLSACASLG 246
FD M E++ +WS+MI + G A+ ++ R+ +K P ++ L+ C +
Sbjct: 282 FDGMVERNEYTWSTMIAALSHGGRIDAAIAVY---GRDPVKSIPSQTALLTGLARCGRIT 338
Query: 247 ALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
+ E + +P++ + +I Y + G + +A ++F M ++ + W +
Sbjct: 339 EARILF---------EQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGM 389
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
++G + NG + A + L + G+ P+ ++ C+H G ++ GRQ S
Sbjct: 390 IAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVH---SLAVK 446
Query: 365 LTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
Y C ++ + G+ ++ ++ M ++ + + W + +A + + A H
Sbjct: 447 AGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVK-DTVSWNSFIAALVQNNMLEDARH 505
Query: 423 VLNQLIA 429
+ + +++
Sbjct: 506 IFDNMLS 512
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/592 (39%), Positives = 353/592 (59%), Gaps = 1/592 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ +N MR G P FTF +L A A G + HSLI K G D + FV T+L++
Sbjct: 229 ALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVD 288
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSF 132
+Y C + A++VFD +P++N+VSW ++I G+ + + A+ +F+ +L + + P+
Sbjct: 289 MYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEV 348
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
S+ VL+AC +G L+ + +HG V + G +V SL+D+Y KC ++ ++F +
Sbjct: 349 SVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCV 408
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
++D+V+W+ ++ G+ N +EA + F+ M+RE + P+ + VL + ASL AL G
Sbjct: 409 GDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGT 468
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ + ++ N + +LI MYAKCG + A +VF ++D + + W A++S ++G
Sbjct: 469 AIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHG 528
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+F + GI+P+ TFV +L C+H G V+EG FNSM ++ + P EHY
Sbjct: 529 CANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHY 588
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEP 432
CMVDLLGR+G LDEA I+SMPM+P VWGALL CR + + +L +EP
Sbjct: 589 ACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEP 648
Query: 433 WNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHP 492
+N GNYVLL+N+ + S + +A ++R +MG G++K GCSW++V + F D SH
Sbjct: 649 YNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHS 708
Query: 493 LSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPK 552
S++IY L++L +K G+V T+ V +EE E++ L HSEKLALAFGL+T
Sbjct: 709 SSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPID 768
Query: 553 DVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI KNLR CG CH +KL SKI REIIVRD NRFH F +G CSC D+W
Sbjct: 769 SPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 212/405 (52%), Gaps = 13/405 (3%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-- 93
+L + + + H+ I+ F+ +L+NLY CG L AL +F
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 94 KNVVSWTAIISGYINEGNLE-EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
K +V+WT++I+ +++ N+ +A+++F ++ G P+ F+ +L+A + +
Sbjct: 208 KTIVTWTSLIT-HLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQ 266
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+H +++ G N+FV T+LVD+YAKC +M A RVFDQMPE+++VSW+SMI G+ N
Sbjct: 267 LHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 326
Query: 213 PKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
A+ +F ++ RE + P ++ VLSACA++G L G + + + +
Sbjct: 327 YDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMN 386
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
+L+DMY KC + K+F+ + D+D V WN +V G N + A F + + GI P
Sbjct: 387 SLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILP 446
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ +F +L + +G + + ++ + M G ++ + + G L +A+++
Sbjct: 447 DEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCI-LGSLITMYAKCGSLVDAYQV 505
Query: 392 IKSMPMEPNAIVWGALLAGCRLH----KKTDLAEHVLNQLIALEP 432
+ + + N I W A+++ +LH + +L EH+L++ +EP
Sbjct: 506 FEGIE-DHNVISWTAMISAYQLHGCANQVIELFEHMLSE--GIEP 547
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 136/287 (47%), Gaps = 23/287 (8%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GFV ND F+ A ++ MR EG LP +F VL + A G H I+K G
Sbjct: 419 LVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLG 478
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + SL+ +Y CG L DA +VF+ I D NV+SWTA+IS Y G + I +F
Sbjct: 479 YVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFE 538
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLG-------DLSTAKWIHGYVNEAGKGRNVFVATSLV 173
+L G++P + V VL+AC+ G ++ K IH + G + +V
Sbjct: 539 HMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH----DMNPGPEHYAC--MV 592
Query: 174 DLYAKCGNMEKARRVFDQMPEKDIVS-WSSMI---QGYASNGFPKEALDMFYNMQRENLK 229
DL + G +++A+R + MP K S W +++ + Y + +EA + + M+ N
Sbjct: 593 DLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYN-- 650
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
P Y ++ + C G LE M N P G + ID+
Sbjct: 651 PGNYVLLA--NMCTRSGRLEEANEVRRLMGVNGVRKEP--GCSWIDV 693
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/530 (41%), Positives = 322/530 (60%)
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
Y CG L A KVF I DK V SW A+I G+ G+ +A+++ ++ + G +PD F+I
Sbjct: 395 YAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTI 454
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
+L AC L L K IHGYV G + FV TSL+ Y CG AR +FD+M +
Sbjct: 455 SSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKD 514
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
K++VSW++MI GY+ NG P E+L +F E ++ +V V AC+ L AL LG A
Sbjct: 515 KNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEA 574
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
++ + + +G ++IDMYAK G + ++ KVF +KDK+ WNA++ ++G+
Sbjct: 575 HGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHG 634
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
K A ++ +++K G P+ T++G+L C HAGLV+EG ++F M + P +EHY C
Sbjct: 635 KEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYAC 694
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWN 434
++D+L R+G+LD+A L+ MP E + +W +LL CR ++ E V +L+ LEP
Sbjct: 695 LIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDK 754
Query: 435 SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLS 494
+ NYVLLSN+Y+ KW+ ++R MM + G+QK GCSW+EV G V+ F+VGD+ P S
Sbjct: 755 AENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKS 814
Query: 495 EKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDV 554
+I L ++ G+ P T VL ++ EEEK L HSEKLA++FGL+ T
Sbjct: 815 AEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTT 874
Query: 555 IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+RI KNLR+C DCH A KLISK REI+VRDN RFH F +G CSC D+W
Sbjct: 875 LRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 218/414 (52%), Gaps = 11/414 (2%)
Query: 4 GFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC 63
GF S D F +E + EG LP T +L CA E + +G+ H L VK GL
Sbjct: 226 GF-SRDSFDLLMEM---LGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSE 281
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
+ V +++ +Y CGYL +A F +KNVVSW +IS + EG++ EA N+ + +
Sbjct: 282 EVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQ 341
Query: 124 HRG--LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+G +K + +I+ VL AC L + K +HGY ++V ++ + + YAKCG
Sbjct: 342 IQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF-QHVELSNAFILAYAKCGA 400
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ A +VF + +K + SW+++I G+A NG P++AL + + M +P+++T+ +L A
Sbjct: 401 LNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLA 460
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
CA L +L+ G ++ RN ++ +GT+L+ Y CG+ + A +F MKDK+ V W
Sbjct: 461 CAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSW 520
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA++SG S NG + +F + GIQ + V + C+ + G++ + +
Sbjct: 521 NAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLK 580
Query: 362 VFSLTPMIEHYGC-MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+L GC ++D+ +SG + E+ ++ + + N W A++ +H
Sbjct: 581 --ALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLK-DKNVASWNAIIVAHGIH 631
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 184/328 (56%), Gaps = 6/328 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G N + A+ M G P FT +L ACA Q G H +++ G
Sbjct: 422 LIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNG 481
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV TSLL+ Y+HCG + A +FD + DKN+VSW A+ISGY G E++ +FR
Sbjct: 482 LETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFR 541
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ L G++ +IV V AC+QL L K HGYV +A + + FV S++D+YAK G
Sbjct: 542 KSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSG 601
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++++R+VFD + +K++ SW+++I + +G KEA++++ M++ P+ +T +G+L
Sbjct: 602 CIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILM 661
Query: 241 ACASLGALELGVWASSFMERNEF-LSNPVLG--TTLIDMYAKCGRMAQACKVFREM-KDK 296
AC G +E G+ F E F L P L LIDM A+ GR+ A ++ EM ++
Sbjct: 662 ACGHAGLVEEGL--KYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEA 719
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
D +W++++ G +++ V +L
Sbjct: 720 DNRIWSSLLRSCRTFGALEIGEKVAKKL 747
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 206/420 (49%), Gaps = 19/420 (4%)
Query: 1 MIRGFVSNDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ N + ++ F + + + F P NFTFP V+KAC D +LG H +++K
Sbjct: 116 LVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKM 175
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL D FV +L+ +Y CG + +A+KVFD +P+ N+VSW ++I + G ++ ++
Sbjct: 176 GLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLL 235
Query: 120 RRLL-HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+L GL PD ++V +L C G++ IHG + G V V ++V +Y+K
Sbjct: 236 MEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSK 295
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM--QRENLKPEYYTMV 236
CG + +A+ F + K++VSW++MI ++ G EA ++ M Q E +K T++
Sbjct: 296 CGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTIL 355
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VL AC L + R+ F + L I YAKCG + A KVF + DK
Sbjct: 356 NVLPACLDKLQLRSLKELHGYSFRHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDK 414
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
WNA++ G + NG + A + Q+ G QP+ T LL C H + G++
Sbjct: 415 TVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIH 474
Query: 357 NSMSR------VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ R F T ++ HY G+ A L M + N + W A+++G
Sbjct: 475 GYVLRNGLETDFFVGTSLLSHY-------IHCGKASSARVLFDRMK-DKNLVSWNAMISG 526
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 173/314 (55%), Gaps = 5/314 (1%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDEFV-KTSLLNLYVHCGYLADALKVFDDIPD 93
+L+AC + D + G R H + + +++V T L+ +Y CG D+ VFD++
Sbjct: 48 LLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMET 107
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKW 152
KN++ W A++SGY G + + +F L+ +PD+F+ V+ AC + D+ +
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEV 167
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IHG V + G +VFV +LV +Y KCG +++A +VFD MPE ++VSW+SMI ++ NGF
Sbjct: 168 IHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGF 227
Query: 213 PKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
+++ D+ M E L P+ T+V +L CA G +++G+ + ++
Sbjct: 228 SRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNN 287
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG--I 329
++ MY+KCG + +A F + +K+ V WN ++S S+ G V AF + +++ G +
Sbjct: 288 AMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEM 347
Query: 330 QPNGNTFVGLLCGC 343
+ N T + +L C
Sbjct: 348 KANEVTILNVLPAC 361
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/529 (42%), Positives = 339/529 (64%), Gaps = 8/529 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR---EHDFQLGVRSHSLIV 57
+IRGF ++ Q + Y+ +RN G +P TFP +LKA ++ E+ FQ ++ IV
Sbjct: 75 IIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQF----YAHIV 130
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
K GLD D FV+ SL++ + HCGY+ + ++F + K+VVSWTA+I+G + G EA+
Sbjct: 131 KFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALE 190
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG-RNVFVATSLVDLY 176
F + G++ D +IV VL A L D+ +W+HG+ E+G+ +V+V ++LVD+Y
Sbjct: 191 CFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMY 250
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+KCG + A +VF++MP +++VSW ++I GY KEAL +F M E ++P T+
Sbjct: 251 SKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVT 310
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
L+ACA LG+L+ G W +++R++ N LGT L+DMY+KCG + +A VF ++ K
Sbjct: 311 SALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAK 370
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
D W A+++GL+M G + +F Q+ + +QPNG TF+G+L C H GLVDEG + F
Sbjct: 371 DVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELF 430
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
M + L P ++HYGCMVDLLGR+G+L+EA + I+SMPMEP VWGAL +GC +HK
Sbjct: 431 RLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKA 490
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
+L EH+ N LI L+P +SG Y+LL+N+YS KW AA +R +M KG+ K GCSW+E
Sbjct: 491 FELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWIE 550
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIE 525
V+GV+HEF+ D SH S +Y L+ ++ +LK A + ++ + F I+
Sbjct: 551 VNGVIHEFIAFDKSHTESINVYMMLESVSAQLKLATYALDSNLLTFTID 599
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 192/381 (50%), Gaps = 10/381 (2%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVH-CGYLADALKVFDDIPDKNVVSWTAIISGYINE 109
++ S+++ +GL F + +L GY L +FD + + W II G+
Sbjct: 26 QTTSILITSGLAHHTFFLSDILRSATKDLGY---TLLLFDRLATPYIFLWNTIIRGFSAS 82
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+ + + RL + G+ PD + +L A ++L + + ++ + ++ + G + FV
Sbjct: 83 SQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQF-YAHIVKFGLDFDAFVQ 141
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
SLV +A CG ++ +RR+F + +KD+VSW+++I G NG EAL+ F M+ ++
Sbjct: 142 NSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVE 201
Query: 230 PEYYTMVGVLSACASLGALELGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+ T+V VL A A L + G W F +E + + +G+ L+DMY+KCG A K
Sbjct: 202 VDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVK 261
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF EM ++ V W A+++G K A VF ++ GI+PN +T L C G
Sbjct: 262 VFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGS 321
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+D+GR + R S + G +VD+ + G +DEA + + +P + + W A+
Sbjct: 322 LDQGRWLHEYVDR--SKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAK-DVYPWTAM 378
Query: 408 LAGCRLHKKTDLAEHVLNQLI 428
+ G + + ++ +Q+I
Sbjct: 379 INGLAMRGDALSSLNLFSQMI 399
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 32/331 (9%)
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL-- 245
+FD++ I W+++I+G++++ P+ L + ++ + P+ +T +L A + L
Sbjct: 60 LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 246 -GALELGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+ F ++ + F+ N +L+ +A CG + + ++F E KD V W A
Sbjct: 120 ENPFQFYAHIVKFGLDFDAFVQN-----SLVSAFAHCGYVDCSRRLFIETAKKDVVSWTA 174
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR---QFFNSMS 360
+++G NG A F ++ G++ + T V +LC V GR F+
Sbjct: 175 LINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESG 234
Query: 361 RVFSLTPMIEHY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
RV + + Y +VD+ + G D+A ++ MP N + WGAL+AG +
Sbjct: 235 RV-----IWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTR-NLVSWGALIAGYVQCNRYK 288
Query: 419 LAEHVLNQLI--ALEPWNSGNYVLLSNIYSAS--------HKWNDAAK--IRSMMGDKGI 466
A V ++I +EP S L+ H++ D +K + S +G +
Sbjct: 289 EALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALV 348
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKI 497
C V+ +V E L + +P + I
Sbjct: 349 DMYSKCGCVDEALLVFEKLPAKDVYPWTAMI 379
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/590 (40%), Positives = 348/590 (58%), Gaps = 41/590 (6%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
F R P +FTF F LKA A + G++ HS + G D FV T+L+++Y
Sbjct: 90 FIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYA 149
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVR 136
CG A +VFD++ + NVV+W A+++ G++E A ++F G P VR
Sbjct: 150 ECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVF------GCMP-----VR 198
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
LT+ W ++ YAK G + ARRVF +MP +D
Sbjct: 199 NLTS-----------W-----------------NGMLAGYAKAGELGLARRVFYEMPLRD 230
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASS 256
VSWS+MI G+A NG EA F + RE ++ ++ GVLSACA GA E G
Sbjct: 231 EVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHG 290
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV-WNAVVSGLSMNGYVK 315
F+E+ FL + LID Y+KCG +A A VF+ M +V W ++++GL+M+G +
Sbjct: 291 FVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGE 350
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A +F ++E+ G++P+G TF+ LL C+H+GLV+EG F+ M ++ + P IEHYGCM
Sbjct: 351 EAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCM 410
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNS 435
VDL GR+ +L +A+E I MP+ PNAI+W LL C +H ++AE V +L ++P NS
Sbjct: 411 VDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNS 470
Query: 436 GNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSE 495
G++VLLSN+Y+ + KW D + IR M + ++K G S +E+D V++ F+ G+ + ++E
Sbjct: 471 GDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTE 530
Query: 496 KIYSKLDELATKLKA-AGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDV 554
+ + KL E+ +L+ AG+ P VL DIEEEEK+ ++ HSEKLA AFG+ +
Sbjct: 531 EAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRI 590
Query: 555 IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+RI KNLRVCGDCH +KLISK+ EIIVRD +RFH F +G CSC+D+W
Sbjct: 591 LRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRFHSFKDGFCSCRDYW 640
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF N CF A F+ + E + VL ACA+ F+ G H + KAG
Sbjct: 237 MIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAG 296
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
V +L++ Y CG +A A VF ++P +++VSWT+II+G G EEAI +F
Sbjct: 297 FLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLF 356
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV-NEAGKGRNVFVATSLVDLYAK 178
+ G++PD + + +L AC+ G + + + N G + +VDLY +
Sbjct: 357 HEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGR 416
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG 211
++KA +MP + + W +++ + +G
Sbjct: 417 AARLQKAYEFICEMPVSPNAIIWRTLLGACSIHG 450
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/569 (41%), Positives = 352/569 (61%), Gaps = 1/569 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L + R + G++ H+ I+K GL V +L+NLY +L+VFD+ P K+
Sbjct: 31 LLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKS 90
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+W+++IS + A+ FRR+L+ G++PD AC L K +H
Sbjct: 91 STTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHC 150
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ G +VFV +SLVD+YAKCG + AR +FD+MPE+++VSWS MI GYA E
Sbjct: 151 LAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVE 210
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL +F E++ +T V+ C+S LELG + F S+ +G+ LI
Sbjct: 211 ALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALIS 270
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y+KCG + A +VF E+ ++ +WN+++ + + + + FG+F ++ G++PN +
Sbjct: 271 LYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIS 330
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
F+ +L C+HAGLV++GR++F S+ R + + P EHY +VDLLGR+G+L EA +IK M
Sbjct: 331 FLSVLYACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQM 389
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
PM P VWGALL GCR+HK T++A V ++++ ++ +SG +VLLSN Y+A+ ++ +AA
Sbjct: 390 PMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAA 449
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
++R M+ D+G++K G SWVE VH F GD SH +IY KL+EL +++ AG+V
Sbjct: 450 RMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVA 509
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
T VL ++ EEK + HSE+LA+AFGLIT P IR+ KNLRVCGDCH AIK +S
Sbjct: 510 DTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMS 569
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K GR +IVRDNNRFH F +G CSC D+W
Sbjct: 570 KCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 168/318 (52%), Gaps = 1/318 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F N+ A++F+ M N+G P + +P KAC +G H L VK G
Sbjct: 97 VISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTG 156
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
CD FV +SL+++Y CG + DA +FD++P++NVVSW+ +I GY + EA+ +F+
Sbjct: 157 YYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFK 216
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ L + + F+ V+ C+ L K IHG + + FV ++L+ LY+KCG
Sbjct: 217 QALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCG 276
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E A +VFD++P +++ W+SM+ A + + +F M +KP + + + VL
Sbjct: 277 VIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLY 336
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQV 299
AC+ G +E G S M +L+D+ + G++ +A V ++M + +
Sbjct: 337 ACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTES 396
Query: 300 VWNAVVSGLSMNGYVKVA 317
VW A+++G ++ ++A
Sbjct: 397 VWGALLTGCRIHKDTEMA 414
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 160/347 (46%), Gaps = 27/347 (7%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
I +L + T+ L +H ++ + G V+ +L++LY+K + +VFD+ P
Sbjct: 28 ICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETP 87
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
+K +WSS+I +A N P AL F M + ++P+ + AC L ++G
Sbjct: 88 KKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKS 147
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ + + +G++L+DMYAKCG + A +F EM +++ V W+ ++ G +
Sbjct: 148 VHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDD 207
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF--------FNSMSRVFSL 365
A +F Q + N TF ++ C+ + ++ G+ F+S S V S
Sbjct: 208 GVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGS- 266
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
++ L + G ++ A+++ +P N +W ++L C H T +
Sbjct: 267 --------ALISLYSKCGVIEGAYQVFDEIPTR-NLGLWNSMLIACAQHAHTQRVFGLFE 317
Query: 426 QL--IALEPWNSGNYV-LLSNIYSASHKW--NDAAKIRSMMGDKGIQ 467
++ + ++P N++ LS +Y+ SH + S+M D GI+
Sbjct: 318 EMGNVGMKP----NFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 81/194 (41%), Gaps = 14/194 (7%)
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
+ + + + Y + +L + +L G+ + + + + P++ LI++Y+K
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ +VF E K W++V+S + N +A F ++ G++P+ + +
Sbjct: 76 PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHY------GCMVDLLGRSGQLDEAHELIKSMP 396
C D G+ V L +Y +VD+ + G++ +A L MP
Sbjct: 136 CGFLRRSDVGKS-------VHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP 188
Query: 397 MEPNAIVWGALLAG 410
E N + W ++ G
Sbjct: 189 -ERNVVSWSGMIYG 201
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/561 (41%), Positives = 335/561 (59%), Gaps = 31/561 (5%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ YV L DA ++FD IP ++++SW +ISGY +G+L +A RRL D
Sbjct: 194 LMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQA----RRLFEESPVRD 249
Query: 131 SFSIVRVLTACTQLGDLSTAK----------------WIHGYVN--EAGKGRNVFVATSL 172
F+ ++ A Q G L A+ I GY GR +F
Sbjct: 250 VFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPF 309
Query: 173 VDL---------YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
++ Y + G++ +AR +FD MP++D VSW+++I GYA NG +EA++M M
Sbjct: 310 PNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEM 369
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
+R+ T LSACA + ALELG + R + ++G L+ MY KCG +
Sbjct: 370 KRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCI 429
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
+A VF+ ++ KD V WN +++G + +G+ + A VF + G++P+ T VG+L C
Sbjct: 430 DEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSAC 489
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
+H GL D G ++F+SM++ + +TP +HY CM+DLLGR+G L+EA LI++MP EP+A
Sbjct: 490 SHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAAT 549
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGD 463
WGALL R+H +L E + +EP NSG YVLLSN+Y+AS +W D +K+R M
Sbjct: 550 WGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQ 609
Query: 464 KGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
G+QK G SWVEV +H F VGD HP +IY+ L+EL K+K G+V +T VL D
Sbjct: 610 IGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHD 669
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
+EEEEK++ L HSEKLA+AFG++T IR+ KNLRVC DCH AIK ISKI GR II
Sbjct: 670 VEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLII 729
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
VRD++R+H F EG CSC+D+W
Sbjct: 730 VRDSHRYHHFSEGICSCRDYW 750
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 190/400 (47%), Gaps = 55/400 (13%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D F +L Y L DA +FD +P+K+VVSW A++SGY+ G+++EA ++F R+
Sbjct: 94 DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP 153
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAK--------W--------IHGYV--NEAGKGRN 165
H+ +S S +L A + G L A+ W + GYV N G R
Sbjct: 154 HK----NSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQ 209
Query: 166 VFVATSLVDL---------YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+F + DL YA+ G++ +ARR+F++ P +D+ +W++M+ Y +G EA
Sbjct: 210 LFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEA 269
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLI 274
+F M ++ + Y M+ + A +++G E E + P +G+ +I
Sbjct: 270 RRVFDEMPQKR-EMSYNVMI---AGYAQYKRMDMG------RELFEEMPFPNIGSWNIMI 319
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
Y + G +AQA +F M +D V W A+++G + NG + A + ++++ G N +
Sbjct: 320 SGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRS 379
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD--LLG---RSGQLDEAH 389
TF L C ++ G+Q + R GC+V L+G + G +DEA+
Sbjct: 380 TFCCALSACADIAALELGKQVHGQVVRTGY------EKGCLVGNALVGMYCKCGCIDEAY 433
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
++ + + + + W +LAG H A V +I
Sbjct: 434 DVFQGV-QHKDIVSWNTMLAGYARHGFGRQALTVFESMIT 472
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 173/367 (47%), Gaps = 37/367 (10%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T ++ ++ G+ AL VFD +P +N VS+ A+ISGY+ A ++F ++ H+
Sbjct: 37 TKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHK--- 93
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
D FS +LT + L A+ + + E ++V +++ Y + G++++AR V
Sbjct: 94 -DLFSWNLMLTGYARNRRLRDARMLFDSMPE----KDVVSWNAMLSGYVRSGHVDEARDV 148
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD+MP K+ +SW+ ++ Y +G +EA +F + L + C G +
Sbjct: 149 FDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWEL---------ISCNCLMGGYV 199
Query: 249 ELGVWASSFMERNEFLSNPVLG----TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
+ + + R F PV T+I YA+ G ++QA ++F E +D W A+
Sbjct: 200 KRNMLGDA---RQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAM 256
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
V +G + A VF ++ Q ++ ++ G +D GR+ F M
Sbjct: 257 VYAYVQDGMLDEARRVFDEMP----QKREMSYNVMIAGYAQYKRMDMGRELFEEMP---- 308
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
P I + M+ ++G L +A L MP + +++ W A++AG + + L E +
Sbjct: 309 -FPNIGSWNIMISGYCQNGDLAQARNLFDMMP-QRDSVSWAAIIAG---YAQNGLYEEAM 363
Query: 425 NQLIALE 431
N L+ ++
Sbjct: 364 NMLVEMK 370
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 117/233 (50%), Gaps = 7/233 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N ++ A+ M+ +G TF L ACA +LG + H +V+ G
Sbjct: 349 IIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTG 408
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V +L+ +Y CG + +A VF + K++VSW +++GY G +A+ +F
Sbjct: 409 YEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFE 468
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLG--DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
++ G+KPD ++V VL+AC+ G D T ++ H + G N ++DL +
Sbjct: 469 SMITAGVKPDEITMVGVLSACSHTGLTDRGT-EYFHSMNKDYGITPNSKHYACMIDLLGR 527
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
G +E+A+ + MP E D +W +++ +G ++A +M + M+ N
Sbjct: 528 AGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHN 580
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/606 (36%), Positives = 346/606 (57%), Gaps = 4/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + N + AI ++ M+ G P + + +L++C +LG + HS +++A
Sbjct: 159 VISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQ 218
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + V+T++ N+YV CG+L A VFD + +N V+WT ++ GY LE A+ +F
Sbjct: 219 LNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFA 278
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G++ D F VL C L D + IH ++ + G V V T LVD Y KCG
Sbjct: 279 RMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCG 338
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A R F ++ E + VSWS++I G++ +G ++ + +F +++ E + + V
Sbjct: 339 DIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQ 398
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+ L +G A + +S + ++ MY+KCGR+ A + F + + D V
Sbjct: 399 ACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVA 458
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++SG + +G A G F +++ G++PN TF+ +L C+H+GLV E +Q+ SMS
Sbjct: 459 WTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMS 518
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R + + P I+HY CM+D R+G L EA ELI MP EP+A+ W +LL GC H L
Sbjct: 519 RDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLG 578
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ L L+P ++ Y+LL N+YSA KW +A +R +M ++ ++K CSW+ V G
Sbjct: 579 KIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQ 638
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKL--KAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F+VGD HP +E IYSKL+E + + D V + ++Q L HSE
Sbjct: 639 VHRFVVGDRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSCSLSARKEQ--LLDHSE 696
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLA+AFGLI+T I + KNLR C DCHE K +S +TGR+I+VRD+ RFH F G C
Sbjct: 697 KLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKC 756
Query: 599 SCKDFW 604
SC D+W
Sbjct: 757 SCNDYW 762
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 197/405 (48%), Gaps = 4/405 (0%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
+ A +F M + T ++ + +AC + G H + + + ++
Sbjct: 68 LKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENC 127
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
LL +Y CG D KVFD++ KN+VSW +IS Y G LE+AI +F + G++P+
Sbjct: 128 LLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S + +L +C L K IH +V A N+ V T++ ++Y +CG +E A+ VFD
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
M ++ V+W+ ++ GY + AL++F M E ++ + + VL C L ++
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDM 307
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G S + + S +GT L+D Y KCG + A + F + + + V W+A++SG S
Sbjct: 308 GRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF-NSMSRVFSLTPMI 369
+G ++ +F L G+ N + + C ++ G Q +++ R L +
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKR--GLVSYL 425
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
MV + + G+LD A +S+ EP+A+ W A+++G H
Sbjct: 426 YGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYH 469
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 147/309 (47%), Gaps = 14/309 (4%)
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
+G L+EA + + + + S + AC +L L+ + IH + K +
Sbjct: 64 KQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGS 123
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
+ L+ +Y CG+ ++VFD+M K++VSW +I YA NG ++A+ +F +MQ
Sbjct: 124 IENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASG 183
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
++P + +L +C LELG S + R + +N + T + +MY +CG + A
Sbjct: 184 IRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAK 243
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
VF M ++ V W ++ G + ++VA +F ++ G++ + F +L C
Sbjct: 244 LVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLE 303
Query: 348 LVDEGRQFFNSM------SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
D GRQ + + S V TP+++ Y + G ++ A+ + EPN
Sbjct: 304 DWDMGRQIHSHIVKLGAESEVSVGTPLVDFY-------VKCGDIESAYRSFGRIS-EPND 355
Query: 402 IVWGALLAG 410
+ W AL++G
Sbjct: 356 VSWSALISG 364
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/607 (38%), Positives = 358/607 (58%), Gaps = 4/607 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G N + A+ ++SM G +PT F +A A G + H + V+ G
Sbjct: 90 LVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLG 149
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + FV ++L ++Y G L +A +VFD +P K+ V+WTA+I GY GNLE A+ FR
Sbjct: 150 FDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFR 209
Query: 121 RLLHRGL-KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ GL D + VL+A L D A+ IH V ++G + V V +L D+YAK
Sbjct: 210 DMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKA 269
Query: 180 GNMEKARRV--FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
+M+ A RV DQ ++VS +S+I GY ++AL MF ++R+ ++P +T
Sbjct: 270 ADMDNAARVVKIDQ-GSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSS 328
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
++ CA LE G + + + +S+ + +TL+DMY KCG ++ + ++F+E++
Sbjct: 329 MIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHT 388
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+ WNA ++ L+ +G+ + A F ++ GI+PN TFV LL C+HAGLVDEG ++F
Sbjct: 389 DIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFY 448
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
SM + P EHY C++D+ GR+G+LDEA + I MP++PNA W +LL CR+
Sbjct: 449 SMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNK 508
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
+L E + ++ LEP N+G +V LS IY++ +W D +R +M D I+K+ G SWV+
Sbjct: 509 ELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDS 568
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
+ H F D SHP EKIY KL+EL ++K G+VP T + ++E+ KQ L HS
Sbjct: 569 NKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHS 628
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
E++A+AF LI+ I + KNLR+C DCH A+K ISK+ R+IIVRDN+RFH F++G
Sbjct: 629 ERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKGG 688
Query: 598 CSCKDFW 604
CSC D+W
Sbjct: 689 CSCGDYW 695
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 190/387 (49%), Gaps = 13/387 (3%)
Query: 29 TNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC-DEFVKTSLLNLYVHCGYLADALKV 87
T+ L++C R D +LG H+ +V +G F+ L+ +Y HC + A+++
Sbjct: 16 TSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRL 75
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD +P N+VSWT ++SG +A+ F + GL P F++ A L
Sbjct: 76 FDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAAR 135
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+H G +FVA++L D+Y+K G + +A RVFDQMP+KD V+W++MI GY
Sbjct: 136 HAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGY 195
Query: 208 ASNGFPKEALDMFYNMQRENL-KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
A NG + A+ F +M+RE L + + + VLSA L L S + ++ F
Sbjct: 196 AKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQE 255
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV-----AFGVF 321
+ L DMYAK M A +V + DQ N V + ++GY++ A +F
Sbjct: 256 VAVRNALTDMYAKAADMDNAARVVK----IDQGSLNVVSATSLIDGYIETDCIEKALLMF 311
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
+L + G++PN TF ++ GC L+++G Q + + SL ++D+ G+
Sbjct: 312 IELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKT-SLISDSFVSSTLLDMYGK 370
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALL 408
G + + +L K + + I W A +
Sbjct: 371 CGLISLSIQLFKEIEYHTD-IAWNAAI 396
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/609 (38%), Positives = 351/609 (57%), Gaps = 8/609 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ F N F F+ M +G P L AC + +G I+ G
Sbjct: 47 MLAAFAENRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTG 106
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ + V+T+L++LY G+ DA VF + ++VV+W+A+++ Y G+ EA+ +FR
Sbjct: 107 IEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFR 166
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ P+ ++V L AC LGDL + +H V G V V T+LV+LY KCG
Sbjct: 167 QMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCG 226
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E A F Q+ EK++V+WS++ YA N ++A+ + + M E L P T V VL
Sbjct: 227 RIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLD 286
Query: 241 ACASLGALELGVWASSFMERNEFL-----SNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
ACA++ AL+ G ER L S+ + T L++MY+KCG +A A +F ++
Sbjct: 287 ACAAIAALKQG---RRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAH 343
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
D V+WN++++ + +G + A +F ++ G+QP TF +L C+HAG++D+GR+
Sbjct: 344 LDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKH 403
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F S + P EH+GCMVDLLGR+G + ++ +L+ MP EP+ + W A L CR ++
Sbjct: 404 FVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYR 463
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
D A L L+P YVLLSN+Y+ + +W+D A++R M K G SW+
Sbjct: 464 NMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWI 523
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
EV VHEF+ GD HP +I+++L L +KAAG+VP T+ VL D+++E K+ +
Sbjct: 524 EVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGY 583
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+AF L+TT IR+ KNLRVC DCH A K ISK+ REI+VRD NRFH F
Sbjct: 584 HSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQN 643
Query: 596 GSCSCKDFW 604
G+CSC D+W
Sbjct: 644 GACSCGDYW 652
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 198/414 (47%), Gaps = 20/414 (4%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
+ F+ L++LY C DAL VF I KNV SWT +++ + + + FR +L
Sbjct: 9 NRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGML 68
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
+G+ P I L+ACT +++ + I + G V T+LV LY K G+
Sbjct: 69 LQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCT 128
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
A VF +M +D+V+WS+M+ YA NG P+EAL +F M + + P T+V L ACA
Sbjct: 129 DAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACA 188
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
SLG L G +E S V+GT L+++Y KCGR+ A + F ++ +K+ V W+A
Sbjct: 189 SLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSA 248
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM---- 359
+ + + N + A V +++ G+ PN TFV +L C + +GR+ +
Sbjct: 249 ISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLG 308
Query: 360 ----SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
S V+ LT ++ Y +L D+ L + ++W +L+A H
Sbjct: 309 GGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHL--------DLVLWNSLIATNAQHG 360
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKW---NDAAKIRSMMGDKGI 466
+T+ A + ++ LE S +++ SH S +GD GI
Sbjct: 361 QTEKALELFERM-RLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGI 413
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 127/285 (44%), Gaps = 5/285 (1%)
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+ E G RN F+ L+DLY KC + A VF + K++ SW+ M+ +A N
Sbjct: 1 MEELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRC 60
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
F M + + P + LSAC + +G + ++ T L+ +
Sbjct: 61 WLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSL 120
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
Y K G A VF M +D V W+A+V+ + NG+ + A G+F Q++ G+ PN T
Sbjct: 121 YGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTL 180
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
V L C G + G + + + +V+L G+ G+++ A E +
Sbjct: 181 VSGLDACASLGDLRSG-ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI- 238
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHVLNQ--LIALEPWNSGNYV 439
+E N + W A+ A + + A VL++ L L P NS +V
Sbjct: 239 VEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAP-NSTTFV 282
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/606 (39%), Positives = 343/606 (56%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G N F A+ + MR EG P +FTFP V KA A G + H+L VK G
Sbjct: 79 LVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCG 138
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV S ++Y DA K+FD+IP++N+ +W A IS + +G +EAI F
Sbjct: 139 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFI 198
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
G +P+S + L AC+ L +HG V +G +V V L+D Y KC
Sbjct: 199 EFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCK 258
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + +F +M K+ VSW S++ Y N ++A ++ ++E ++ + + VLS
Sbjct: 259 QIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLS 318
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA + LELG + + N +G+ L+DMY KCG + + + F EM +K+ V
Sbjct: 319 ACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 378
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEK--CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
N+++ G + G V +A +F + CG PN TFV LL C+ AG V+ G + F+S
Sbjct: 379 LNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDS 438
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + + P EHY C+VD+LGR+G +++A E IK MP++P VWGAL CR+H K
Sbjct: 439 MKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPH 498
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L L L+P +SGN+VLLSN ++A+ +W +A +R M GI+K G SW+ V
Sbjct: 499 LGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVK 558
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F D SH ++++I + L +L K++AAG+ P L+D+EEEEK ++ HSE
Sbjct: 559 NQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSE 618
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLALAFGL+ IRI KNLR+CGDCH K +S REIIVRDNNRFH F +G C
Sbjct: 619 KLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGIC 678
Query: 599 SCKDFW 604
SCKD+W
Sbjct: 679 SCKDYW 684
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 195/415 (46%), Gaps = 5/415 (1%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDE--FVKTSLLNLYVHCGYLADALKVFDDIP 92
+LK +LG H+ IVK LD F+ L+N+Y + A V P
Sbjct: 11 LLLKNAISTSSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTP 69
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
+NVVSWT+++SG G+ A+ F + G+ P+ F+ V A L T K
Sbjct: 70 ARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQ 129
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IH + G+ +VFV S D+Y K + AR++FD++PE+++ +W++ I ++G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGR 189
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
PKEA++ F +R +P T G L+AC+ L+LG+ + R+ F ++ +
Sbjct: 190 PKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNG 249
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
LID Y KC ++ + +F EM K+ V W ++V+ N + A ++ + K ++ +
Sbjct: 250 LIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETS 309
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
+L C ++ GR + + I +VD+ G+ G ++++ +
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKA-CVERNIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
MP E N + +L+ G + D+A + + + NY+ ++ SA
Sbjct: 369 DEMP-EKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSA 422
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/668 (34%), Positives = 375/668 (56%), Gaps = 82/668 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI +V ++ A++ ++ M G LP T ++ CA+ D ++G R H IV
Sbjct: 205 MISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNK 264
Query: 61 L----------------------------DCDE-----FVKTSLLNLYVHCGYLADALKV 87
L CDE + T+L++ YV + A ++
Sbjct: 265 LWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQL 324
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD + ++++VSWT ++SGY+ G E++ +F+++ + PD ++V VL+AC L D
Sbjct: 325 FDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDF 384
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-------------- 193
+ +H ++ G + F+ +L+DLYAKCG +++A R F+Q+P
Sbjct: 385 DLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGF 444
Query: 194 -----------------EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
EKDIVSW++M+ Y + E+ ++F MQ N+KP+ T++
Sbjct: 445 CRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLI 504
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
+LS+CA +GAL G+W + ++E+NE + +LGT LIDMY KCG + A ++F ++ +K
Sbjct: 505 SLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEK 564
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ VW A+++ +M G A ++ ++E+ G++P+ TF+ LL C+H GLVDEG ++F
Sbjct: 565 NVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYF 624
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
N + +++ P I HYGCMVDLLGR G L+E + I+ MP+EP+ +W +L+ CR H
Sbjct: 625 NKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHN 684
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
+LAE QLI ++P N+G +VLLSNIY+ + +W+D +K+R+ + + G+ K G + +E
Sbjct: 685 VELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIE 744
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
+GVVHEF+ S+ +S I L ++ +L + ++E + H
Sbjct: 745 QNGVVHEFVA---SNLVSADILCMLQDIERRL---------------LVKQELSDTTSQH 786
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SE+LA+AFGLI IR+ ++R+C DCH +KLIS+ REI++RDN RFH F +G
Sbjct: 787 SERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYRFHRFTDG 846
Query: 597 SCSCKDFW 604
CSCKD+W
Sbjct: 847 HCSCKDYW 854
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 228/466 (48%), Gaps = 68/466 (14%)
Query: 10 CFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKT 69
C Q +E Y M +G L TF F++ AC + D +LG H I+K G ++ +
Sbjct: 113 CPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNN 172
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
+L+ LY CG L + ++F+ + ++V+SW +IS Y+ +G EA+++F +L G+ P
Sbjct: 173 NLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLP 232
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM------- 182
D ++V +++ C +L DL K +H Y+ + + LVD+Y+KCG M
Sbjct: 233 DEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLL 292
Query: 183 --------------------------EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+KAR++FD+M E+ +VSW++M+ GY G+ E+
Sbjct: 293 SRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCES 352
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
L++F M+ EN+ P+ +V VLSAC L +LG +F+ L + LG L+D+
Sbjct: 353 LELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDL 412
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS--------------------------M 310
YAKCG++ +A + F ++ K WN+++ G +
Sbjct: 413 YAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMV 472
Query: 311 NGYVK-----VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-VFS 364
N YVK +F +F +++ ++P+ T + LL C G ++ G + +
Sbjct: 473 NAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIG 532
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ M+ ++D+ G+ G ++ A+E+ + +E N VW A++A
Sbjct: 533 IDAMLG--TALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAA 575
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 212/476 (44%), Gaps = 63/476 (13%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+LK+C+ +F H+ ++ A L D + + +L + L A ++ +
Sbjct: 41 LLKSCSNIREFS---PIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+ W ++ + EG +E + + ++ +G+ D + ++ AC + D+ +HG
Sbjct: 98 SIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHG 157
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ + G GRN + +L+ LY+KCG +++ ++F++M +D++SW++MI Y G +E
Sbjct: 158 RILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYRE 217
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
ALD+F M + P+ TMV ++S CA L LE+G ++ N+ L L+D
Sbjct: 218 ALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVD 277
Query: 276 MYAKCGRMAQA------C---------------------------KVFREMKDKDQVVWN 302
MY+KCG+M +A C ++F +M ++ V W
Sbjct: 278 MYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWT 337
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
++SG GY + +F Q+ + P+ V +L C H D GR
Sbjct: 338 TMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGR--------- 388
Query: 363 FSLTPMIEHYGCMV---------DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
S+ I YG +V DL + G+LDEA + +P + +A W ++L G
Sbjct: 389 -SVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCK-SAASWNSMLDGFCR 446
Query: 414 HKKTDLAEHVLNQLIA--LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
D A N++ + WN+ + N Y +N++ +I M ++
Sbjct: 447 SGGVDKARDFFNKIPEKDIVSWNT-----MVNAYVKHDLFNESFEIFCKMQSSNVK 497
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/677 (35%), Positives = 368/677 (54%), Gaps = 80/677 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLG--VRSHSLIV 57
M+ F A+ ++++ G L P +++F ++ A + H+ + H ++
Sbjct: 131 MMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVL 190
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLA---DALKVFDDIPDKNVVSWT-------------- 100
K+G V +L+ LY+ C DA KV D++PDK+ ++WT
Sbjct: 191 KSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNA 250
Query: 101 -----------------AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A+ISGY+ G +A +FRR++ + D F+ VL+AC
Sbjct: 251 ARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACAN 310
Query: 144 LGDLSTAKWIHG--------YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
G K +HG +V EA + V +LV LY+K G + A+R+FD M K
Sbjct: 311 AGFFVHGKSVHGQIIRLQPNFVPEAA----LPVNNALVTLYSKGGKIVIAKRIFDTMNLK 366
Query: 196 DIVSWSS-------------------------------MIQGYASNGFPKEALDMFYNMQ 224
D+VSW++ M+ GY G ++AL +F M+
Sbjct: 367 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 426
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
E++KP YT G ++AC LGAL+ G + + + F ++ G L+ MYAKCG +
Sbjct: 427 AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVN 486
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A VF M + D V WNA++S L +G+ + A +F Q+ GI P+ +F+ +L C
Sbjct: 487 DARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN 546
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
HAGLVDEG +F SM R F ++P +HY ++DLLGRSG++ EA +LIK+MP EP +W
Sbjct: 547 HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIW 606
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
A+L+GCR + + + +QL + P + G Y+LLSN YSA+ +W DAA++R +M D+
Sbjct: 607 EAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDR 666
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
G++K GCSW+EV +H FLVGD HP ++++Y L+ + +++ G+VP T VL D+
Sbjct: 667 GVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDM 726
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
E EK+Y L HSEKLA+ FGL+ P + + KNLR+CGDCH A+ +SK GREI+V
Sbjct: 727 EPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVV 786
Query: 585 RDNNRFHCFIEGSCSCK 601
RD RFH F +G CSC+
Sbjct: 787 RDVRRFHHFKDGECSCE 803
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 163/366 (44%), Gaps = 48/366 (13%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 126
TSL+ G L DA FD +P ++ V A++S + A+++F LL G
Sbjct: 96 TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155
Query: 127 -LKPDSFSIVRVLTACTQLGDLSTA--KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
L+PD +S +++A Q+ +L+ +H V ++G + V+ +L+ LY KC E
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215
Query: 184 K---ARRVFDQMPEKDIVSWSSM-------------------------------IQGYAS 209
AR+V D+MP+KD ++W++M I GY
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG--VWASSFMERNEFLSNP 267
+G +A ++F M E + + +T VLSACA+ G G V + F+
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335
Query: 268 VL--GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
L L+ +Y+K G++ A ++F M KD V WN ++SG +G + A VF
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVF---- 391
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
K N +++ ++ G H GL ++ + FN M R + P Y + G G L
Sbjct: 392 KVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQM-RAEDVKPCDYTYAGAIAACGELGAL 450
Query: 386 DEAHEL 391
+L
Sbjct: 451 KHGRQL 456
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 43/284 (15%)
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYN-MQR 225
ATSLV A G + A FD +P +D V ++M+ +A A+ +F+ +
Sbjct: 95 ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 154
Query: 226 ENLKPEYYTMVGVLSA-----------CASLGALELGVWASSFMERNEFL---------- 264
+L+P+ Y+ ++SA C L L A++ + + L
Sbjct: 155 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 214
Query: 265 ---------------SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
+ + TT++ Y + G + A VF E+ K VVWNA++SG
Sbjct: 215 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 274
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV---FSLT 366
+G AF +F ++ + + TF +L C +AG G+ + R+ F
Sbjct: 275 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 334
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ +V L + G++ A + +M ++ + + W +L+G
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILSG 377
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/569 (39%), Positives = 339/569 (59%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+++ CA + G R H + LD F+ L+++Y CG L +A +VFD + KN
Sbjct: 47 LIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKN 106
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
V SWT +++G++ G EAI +F R+ G PD ++++ + +C LS + IH
Sbjct: 107 VFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHS 166
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
G ++ A +++++Y KCG++ +A VF +MPEK+++SWS+MI + N E
Sbjct: 167 AAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADE 226
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL F MQ+E ++ + T V VL A S+GALELG + ++ V+G TL++
Sbjct: 227 ALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVN 286
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MY KCG A VF M +K+ V WNA+++ NG + A +F ++ G++PN T
Sbjct: 287 MYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDIT 346
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
FV +L C+H+G + F M + F +TP H+GC++D+LGRSG+L+EA ELI++M
Sbjct: 347 FVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAM 406
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
P+ +A++W +LL C HK D A + EP + Y++LSN+Y+A KW++AA
Sbjct: 407 PVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAA 466
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
K+R M G++K G SW+E+D VHEF+ GD+ HP +I+ L L ++++ G+ P
Sbjct: 467 KVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEP 526
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
V+ +EEEEK L HSEKLA+AFG+ +T P+ + I KNLRVC DCH AIK IS
Sbjct: 527 DRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFIS 586
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ GR I VRD+NRFH F G CSC D+W
Sbjct: 587 GVEGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 164/309 (53%), Gaps = 6/309 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GFV + AI+ ++ M EG LP + +C G HS G
Sbjct: 113 LMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCG 172
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D D +++N+Y CG + +A VF +P+KNV+SW+ +I+ + +EA+ F+
Sbjct: 173 MDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFK 232
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++ D + V VL A T +G L K +H + AG ++ V +LV++Y KCG
Sbjct: 233 LMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCG 292
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + AR VFD M EK++VSW++M+ Y NG +EAL +F +M E ++P T V +L
Sbjct: 293 SPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILY 352
Query: 241 ACASLGALELGVWASSFME-RNEFLSNP--VLGTTLIDMYAKCGRMAQACKVFREMK-DK 296
C+ G + V S F+E R +F P V LIDM + G++ +A ++ + M
Sbjct: 353 CCSHSGKFKDAV--SHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPA 410
Query: 297 DQVVWNAVV 305
D V+W +++
Sbjct: 411 DAVLWTSLL 419
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 171/346 (49%), Gaps = 10/346 (2%)
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+ EA+++ + G D ++R C L + IH +++ R F++
Sbjct: 25 IREAVDLLEQSGAAGGTGDLEQLIR---RCAGAKALEEGRRIHRWMDSGTLDRPRFLSNL 81
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
LVD+Y KCG++ +A+RVFD M K++ SW+ ++ G+ +G EA+ +F+ M +E P+
Sbjct: 82 LVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPD 141
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
++ + +C + AL G S S+ V +I+MY KCG + +A VF
Sbjct: 142 RVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFT 201
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
M +K+ + W+ +++ N A F +++ G++ + T+V +L T G ++
Sbjct: 202 RMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALEL 261
Query: 352 GRQFFNSMSRVFS-LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G+ + V++ L I +V++ G+ G D+A ++ SM +E N + W A+LA
Sbjct: 262 GKALHVRI--VYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSM-VEKNVVSWNAMLAA 318
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH--KWNDA 454
+ ++ A + + + LE + ++ +Y SH K+ DA
Sbjct: 319 YGQNGRSREALALFDSM-DLEGVRPNDITFVTILYCCSHSGKFKDA 363
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/569 (41%), Positives = 351/569 (61%), Gaps = 1/569 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L + R + G++ H+ I+K GL V +L+NLY +L+VFD+ P K+
Sbjct: 31 LLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKS 90
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+W+++IS + A+ FRR+L+ G++PD AC L K +H
Sbjct: 91 STTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHC 150
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ G +VFV +SLVD+YAKCG + AR +FD+MPE+++VSWS MI GYA E
Sbjct: 151 LAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVE 210
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL +F E++ +T V+ C+S LELG + F S+ +G+ LI
Sbjct: 211 ALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALIS 270
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y+KCG + A +VF E+ ++ +WN+++ + + + + FG+F ++ G++PN
Sbjct: 271 LYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIX 330
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
F+ +L C+HAGLV++GR++F S+ R + + P EHY +VDLLGR+G+L EA +IK M
Sbjct: 331 FLSVLYACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQM 389
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
PM P VWGALL GCR+HK T++A V ++++ ++ +SG +VLLSN Y+A+ ++ +AA
Sbjct: 390 PMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAA 449
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
++R M+ D+G++K G SWVE VH F GD SH +IY KL+EL +++ AG+V
Sbjct: 450 RMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVA 509
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
T VL ++ EEK + HSE+LA+AFGLIT P IR+ KNLRVCGDCH AIK +S
Sbjct: 510 DTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMS 569
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K GR +IVRDNNRFH F +G CSC D+W
Sbjct: 570 KCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 167/318 (52%), Gaps = 1/318 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F N+ A++F+ M N+G P + +P KAC +G H L VK G
Sbjct: 97 VISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTG 156
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
CD FV +SL+++Y CG + DA +FD++P++NVVSW+ +I GY + EA+ +F+
Sbjct: 157 YYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFK 216
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ L + + F+ V+ C+ L K IHG + + FV ++L+ LY+KCG
Sbjct: 217 QALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCG 276
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E A +VFD++P +++ W+SM+ A + + +F M +KP + + VL
Sbjct: 277 VIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLY 336
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQV 299
AC+ G +E G S M +L+D+ + G++ +A V ++M + +
Sbjct: 337 ACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTES 396
Query: 300 VWNAVVSGLSMNGYVKVA 317
VW A+++G ++ ++A
Sbjct: 397 VWGALLTGCRIHKDTEMA 414
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 160/347 (46%), Gaps = 27/347 (7%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
I +L + T+ L +H ++ + G V+ +L++LY+K + +VFD+ P
Sbjct: 28 ICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETP 87
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
+K +WSS+I +A N P AL F M + ++P+ + AC L ++G
Sbjct: 88 KKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKS 147
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ + + +G++L+DMYAKCG + A +F EM +++ V W+ ++ G +
Sbjct: 148 VHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDD 207
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF--------FNSMSRVFSL 365
A +F Q + N TF ++ C+ + ++ G+ F+S S V S
Sbjct: 208 GVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGS- 266
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
++ L + G ++ A+++ +P N +W ++L C H T +
Sbjct: 267 --------ALISLYSKCGVIEGAYQVFDEIPTR-NLGLWNSMLIACAQHAHTQRVFGLFE 317
Query: 426 QL--IALEPWNSGNYV-LLSNIYSASHKW--NDAAKIRSMMGDKGIQ 467
++ + ++P N++ LS +Y+ SH + S+M D GI+
Sbjct: 318 EMGNVGMKP----NFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 81/194 (41%), Gaps = 14/194 (7%)
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
+ + + + Y + +L + +L G+ + + + + P++ LI++Y+K
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ +VF E K W++V+S + N +A F ++ G++P+ + +
Sbjct: 76 PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHY------GCMVDLLGRSGQLDEAHELIKSMP 396
C D G+ V L +Y +VD+ + G++ +A L MP
Sbjct: 136 CGFLRRSDVGKS-------VHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP 188
Query: 397 MEPNAIVWGALLAG 410
E N + W ++ G
Sbjct: 189 -ERNVVSWSGMIYG 201
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/628 (37%), Positives = 354/628 (56%), Gaps = 24/628 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK-A 59
M+ V + AIE M G P TF L AC++ LG H+ ++K +
Sbjct: 242 MVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDS 301
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAIN 117
L + FV ++L+++Y + A +VFD +P + + W A++ GY G EEA+
Sbjct: 302 DLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALE 361
Query: 118 MFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F R+ G+ P +I VL AC + + + +HGYV + G N FV +L+DLY
Sbjct: 362 LFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLY 421
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR----------- 225
A+ G+ME AR +F + +D+VSW+++I G G +A + MQ+
Sbjct: 422 ARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTED 481
Query: 226 -------ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
E + P T++ +L CA L A G + R+ S+ +G+ L+DMYA
Sbjct: 482 GIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYA 541
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFV 337
KCG +A + VF + ++ + WN ++ M+G A +F ++ +PN TF+
Sbjct: 542 KCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFI 601
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM-P 396
L C+H+G+VD G + F+SM R + P + + C VD+LGR+G+LDEA+ +I SM P
Sbjct: 602 AALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEP 661
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAK 456
E W + L CRLH+ L E +L LEP + +YVLL NIYSA+ W +++
Sbjct: 662 GEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSE 721
Query: 457 IRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
+R+ M +G+ K GCSW+E+DGV+H F+ G+++HP S +++ +D L +++ G+ P
Sbjct: 722 VRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPD 781
Query: 517 TDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISK 576
T VL DIEE EK L HSEKLA+AFGL+ T P IR+AKNLRVC DCHEA K IS+
Sbjct: 782 TSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISR 841
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ GREI++RD RFH F++G+CSC D+W
Sbjct: 842 MVGREIVLRDVRRFHHFVDGACSCGDYW 869
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 230/484 (47%), Gaps = 41/484 (8%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKAG-LDCDE-FVKTS 70
A++ M EG ++FT VL AC+ D +LG +H+ +K G LD DE F +
Sbjct: 146 ALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNA 205
Query: 71 LLNLYVHCGYLADALKVF-----DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
LL++Y G + DA +F D P VV+W ++S + G EAI + ++ R
Sbjct: 206 LLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVAR 265
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV-NEAGKGRNVFVATSLVDLYAKCGNMEK 184
G++PD + L AC+QL LS + +H YV ++ N FVA++LVD+YA +
Sbjct: 266 GVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGV 325
Query: 185 ARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSA 241
ARRVFD +P + + W++M+ GYA G +EAL++F M+ E + P T+ GVL A
Sbjct: 326 ARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPA 385
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
CA ++ + NP + L+D+YA+ G M A +F ++ +D V W
Sbjct: 386 CARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSW 445
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCG------------------IQPNGNTFVGLLCGC 343
N +++G + G++ AF + ++++ G + PN T + LL GC
Sbjct: 446 NTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGC 505
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
+G++ R +L I +VD+ + G L + + +P + N I
Sbjct: 506 AMLAAPAKGKEIHGYAMR-HALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP-KRNVIT 563
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGD 463
W L+ +H D A + ++++ ++ + + SH S M D
Sbjct: 564 WNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSH---------SGMVD 614
Query: 464 KGIQ 467
+G++
Sbjct: 615 RGME 618
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 10/236 (4%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYV--NEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
D F++ + L L + IHG + G VA +L+ YA+CG++ A
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
+F+ MP +D V+++S+I ALD +M E +T+V VL AC+ L
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177
Query: 248 -LELGVWASSFMERNEFLSNP--VLGTTLIDMYAKCGRMAQACKVFREMKDKDQ-----V 299
L LG A +F +N FL L+ MYA+ G + A +F + D V
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
WN +VS L +G A V + G++P+G TF L C+ ++ GR+
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREM 293
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/609 (37%), Positives = 352/609 (57%), Gaps = 8/609 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I ++ N F F+ M +G P L AC + +G I+ G
Sbjct: 32 LIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTG 91
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ + V+T+L+++Y G+ DA VF + ++VV+W+A+++ Y G+ EA+ +FR
Sbjct: 92 IEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFR 151
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ P+ ++V L AC LGDL + +H V G V V T+LV+LY KCG
Sbjct: 152 QMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCG 211
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E A F Q+ EK++V+WS++ YA N ++A+ + + M E L P T V VL
Sbjct: 212 RIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLD 271
Query: 241 ACASLGALELGVWASSFMERNEFL-----SNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
ACA++ AL+ G ER + L S+ + T L++MY+KCG +A A +F ++
Sbjct: 272 ACAAIAALKQG---RRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAH 328
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
D V+WN++++ + +G + A +F ++ G+QP TF +L C+HAG++D+GR+
Sbjct: 329 LDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKH 388
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F S + P EH+GCMVDLLGR+G + ++ +L+ MP EP+ + W A L CR ++
Sbjct: 389 FVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYR 448
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
D A L L+P YVLLSN+Y+ + +W+D A++R M K G SW+
Sbjct: 449 NMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWI 508
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
EV VHEF+ GD HP +I+++L L +K AG+VP T+ VL D+++E K+ +
Sbjct: 509 EVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGY 568
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+AF L+TT IR+ KNLRVC DCH A K ISK+ REI+VRD NRFH F
Sbjct: 569 HSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQN 628
Query: 596 GSCSCKDFW 604
G+CSC D+W
Sbjct: 629 GACSCGDYW 637
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 197/407 (48%), Gaps = 20/407 (4%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
+L+ Y G + K FD++P ++VSW A+I+ YI + + FR +L +G+ P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
I L+ACT +++ + I + G V T+LV +Y K G+ A VF
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M +D+V+WS+M+ YA NG P+EAL +F M + + P T+V L ACASLG L
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G +E S V+GT L+++Y KCGR+ A + F ++ +K+ V W+A+ + +
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM--------SRV 362
N + A V +++ G+ PN TFV +L C + +GR+ S V
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ LT ++ Y + G L A ++ + + ++W +L+A H +T+ A
Sbjct: 301 YVLTALVNMY-------SKCGNLALAGDMFDKIA-HLDLVLWNSLIATNAQHGQTEKALE 352
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKW---NDAAKIRSMMGDKGI 466
+ ++ LE S +++ SH S +GD GI
Sbjct: 353 LFERM-RLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGI 398
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/609 (39%), Positives = 362/609 (59%), Gaps = 6/609 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G N+C + A E + MR G +P+NFT L +CA LG + H +K G
Sbjct: 932 LISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLG 991
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN-EGNLEEAINMF 119
LD D V +LL LY G + LKVF +P+ + VSW ++I + E ++ +A+ F
Sbjct: 992 LDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYF 1051
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G + + +L+A + L + IH V + + + +L+ Y KC
Sbjct: 1052 LEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKC 1111
Query: 180 GNMEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G M + ++F +M E +D VSW+SMI GY N +A+D+ + M ++ + + +T V
Sbjct: 1112 GEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATV 1171
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
LSACAS+ LE G+ + R S+ V+G+ L+DMY+KCGR+ A + F M ++
Sbjct: 1172 LSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNV 1231
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG-NTFVGLLCGCTHAGLVDEGRQFFN 357
WN+++SG + +G+ + A +F ++ G P+ +G+L C+H G V+EG + F
Sbjct: 1232 YSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFK 1291
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLH-K 415
SMS V+ L+P +EH+ CMVDLLGR+G+LDE + I SMPM+PN ++W +L A CR + +
Sbjct: 1292 SMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGR 1351
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
T+L L+ LEP N+ NYVLL+N+Y++ KW D AK R M + ++K GCSWV
Sbjct: 1352 NTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWV 1411
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
+ VH F+ GD HP + IY KL EL K++ AG++P T + LFD+E E K+ L+
Sbjct: 1412 TMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSY 1471
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEK+A+AF ++T IRI KNLRVCGDCH A ISKI GR+I++RD+NRFH F +
Sbjct: 1472 HSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFED 1530
Query: 596 GSCSCKDFW 604
G CSC D+W
Sbjct: 1531 GKCSCGDYW 1539
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 188/383 (49%), Gaps = 5/383 (1%)
Query: 49 GVRSHSLIVKAGLDCDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI 107
G H+ +++ GL+ ++ + L+N+Y G +ADA VF+ + +K+ VSW ++ISG
Sbjct: 878 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 937
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
E+A F R+ G P +F+++ L++C LG + + IH + G +V
Sbjct: 938 QNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVS 997
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA-SNGFPKEALDMFYNMQRE 226
V+ +L+ LYA+ G + +VF MPE D VSW+S+I + S +A+ F M R
Sbjct: 998 VSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRG 1057
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
T + +LSA +SL E+ + + + + +G L+ Y KCG M +
Sbjct: 1058 GWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNEC 1117
Query: 287 CKVFREMKD-KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
K+F M + +D+V WN+++SG N + A + + + G + + TF +L C
Sbjct: 1118 EKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACAS 1177
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
++ G + R + ++ +VD+ + G++D A + MP+ N W
Sbjct: 1178 VATLERGMEVHACGIRACMESDVVVG-SALVDMYSKCGRIDYASRFFELMPLR-NVYSWN 1235
Query: 406 ALLAGCRLHKKTDLAEHVLNQLI 428
++++G H + A + +++
Sbjct: 1236 SMISGYARHGHGEKALKLFTRMM 1258
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 214/429 (49%), Gaps = 25/429 (5%)
Query: 39 ACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS 98
+C E +L ++S +K G + F+ +L+N+YV G L A K+FD++ ++N+V+
Sbjct: 557 SCCSEEARELHLQS----IKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVT 612
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD--LSTAKWIHGY 156
W +ISGY G +EA FR ++ G P+ ++ L AC + G IHG
Sbjct: 613 WACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGL 672
Query: 157 VNEAGKGRNVFVATSLVDLYAKC-GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+++ G +V V L+ +Y C + AR VFD++ ++ +SW+S+I Y+ G
Sbjct: 673 ISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVS 732
Query: 216 ALDMFYNMQRENL----KPEYYTMVGVLSACASLGALELGVWASSF--MERNEFLSNPVL 269
A D+F +MQ+E L KP YT +++A S L V +E++ FL + +
Sbjct: 733 AYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYV 792
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
G+ L+ +A+ G A +F +M ++ V N ++ GL + A VF +++ +
Sbjct: 793 GSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDL-V 851
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY----GCMVDLLGRSGQL 385
N +++V LL + +++EGR+ + T + ++ +V++ +SG +
Sbjct: 852 GINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAI 911
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNS--GNYVLLSN 443
+A + + M +E +++ W +L++G + + +E + + S N+ L+S
Sbjct: 912 ADACSVFELM-VEKDSVSWNSLISGL---DQNECSEDAAESFLRMRRTGSMPSNFTLIST 967
Query: 444 IYS-ASHKW 451
+ S AS W
Sbjct: 968 LSSCASLGW 976
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 201/424 (47%), Gaps = 17/424 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACARE--HDFQLGVRSHSLIVK 58
+I G+ N A + M GF+P ++ F L+AC +LGV+ H LI K
Sbjct: 616 LISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 675
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLA-DALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
D V L+++Y C A DA VFD I +N +SW +IIS Y G+ A +
Sbjct: 676 TRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYD 735
Query: 118 MFRRLLHRGL----KPDSFSIVRVLTACTQLGD--LSTAKWIHGYVNEAGKGRNVFVATS 171
+F + GL KP+ ++ ++TA D L + + V ++G ++++V ++
Sbjct: 736 LFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSA 795
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
LV +A+ G + A+ +F+QM +++VS + ++ G + A +F+ M ++ +
Sbjct: 796 LVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGIN 854
Query: 232 YYTMVGVLSACASLGALE----LGVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQA 286
+ V +LSA + LE G + + R N V +G L++MYAK G +A A
Sbjct: 855 SDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADA 914
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
C VF M +KD V WN+++SGL N + A F ++ + G P+ T + L C
Sbjct: 915 CSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASL 974
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
G + G Q ++ L + ++ L +G E ++ MP E + + W +
Sbjct: 975 GWIMLGEQIHCDGLKL-GLDTDVSVSNALLALYAETGCFTECLKVFSLMP-EYDQVSWNS 1032
Query: 407 LLAG 410
++
Sbjct: 1033 VIGA 1036
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/602 (36%), Positives = 362/602 (60%), Gaps = 14/602 (2%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ + M G T +L AC+ Q G HS I +G + + V +++
Sbjct: 144 ALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMT 203
Query: 74 LYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+Y CG + +A KVFD + + ++VVSW ++S Y++ ++AI +++R+ L+PD
Sbjct: 204 MYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLRPDK 260
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+ V +L+AC+ D+ + +H + +NV V +LV +YAKCG+ +AR VFD+
Sbjct: 261 VTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDK 320
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-------QRENLKPEYYTMVGVLSACAS 244
M ++ I+SW+++I Y EA +F M + +KP+ V +L+ACA
Sbjct: 321 MEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACAD 380
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV-VWNA 303
+ ALE G S S+ +GT ++++Y KCG + +A ++F + + V +WNA
Sbjct: 381 VSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNA 440
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++ + G A +F ++E G++P+ +FV +L C+H GL D+G+ +F SM+ +
Sbjct: 441 MIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEY 500
Query: 364 -SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
++T I+H+GC+ DLLGR G+L EA E ++ +P++P+A+ W +LLA CR H+ A+
Sbjct: 501 RNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKE 560
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
V N+L+ LEP + YV LSNIY+ KW+ AK+R M ++G++K RG S +E+ +H
Sbjct: 561 VANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMH 620
Query: 483 EFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
+F GD++HP + +I +L +L +++K G+VP T VL ++E+EK+ L HSE+LA+
Sbjct: 621 DFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAI 680
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
A GLI+T +R+ KNLRVC DCH A KLISKI GR+I+VRD RFH F +G CSC+D
Sbjct: 681 ALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQD 740
Query: 603 FW 604
+W
Sbjct: 741 YW 742
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 217/419 (51%), Gaps = 14/419 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ F + + + MR +G P TF L +C + G+R H ++V +
Sbjct: 29 LVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSR 88
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
L+ D V +LLN+Y CG L+ A +VF + +NV+SW+ + + GN+ EA+ F
Sbjct: 89 LEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHF 148
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R +L G+K ++V +L+AC+ + + IH + +G + VA +++ +Y +C
Sbjct: 149 RFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRC 208
Query: 180 GNMEKARRVFDQMPE--KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
G +E+AR+VFD M E +D+VSW+ M+ Y N K+A+ ++ MQ L+P+ T V
Sbjct: 209 GAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQ---LRPDKVTYVS 265
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+LSAC+S + LG + +E N ++G L+ MYAKCG +A VF +M+ +
Sbjct: 266 LLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRS 325
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQ---LEKCG----IQPNGNTFVGLLCGCTHAGLVD 350
+ W ++S V A +F Q LEK G ++P+ FV +L C ++
Sbjct: 326 IISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALE 385
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+G+ + + L+ +V+L G+ G+++EA + ++ P+ +W A++A
Sbjct: 386 QGK-MVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIA 443
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 177/369 (47%), Gaps = 8/369 (2%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y HC DA FD + +N+ SWT +++ + G +E + R+ G++PD+ +
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+ L +C L IH V ++ + V+ +L+++Y KCG++ A+RVF +M
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 194 E-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
++++SWS M +A +G EAL F M +K MV +LSAC+S ++ G
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD--KDQVVWNAVVSGLSM 310
S + + F S ++ ++ MY +CG + +A KVF M + +D V WN ++S
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
N K A ++ +++ ++P+ T+V LL C+ A V GR + L +
Sbjct: 241 NDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVN-DELEKNVI 296
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
+V + + G EA + M + + I W +++ + A H+ Q++ L
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKME-QRSIISWTTIISAYVRRRLVAEACHLFQQMLEL 355
Query: 431 EPWNSGNYV 439
E S V
Sbjct: 356 EKNGSSQRV 364
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 127/274 (46%), Gaps = 2/274 (0%)
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+YA C + A+ FD + ++++ SW+ ++ +A +G KE L M+++ ++P+ T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+ L +C +L G+ + + +P + L++MY KCG ++ A +VF +M+
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 295 DKDQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
V+ W+ + +++G V A F + GI+ + V +L C+ LV +GR
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+ ++ + ++ M + GR G ++EA ++ +M +V ++ +
Sbjct: 181 MIHSCIALSGFESELLVANAVMT-MYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
H L Q + L P LLS SA
Sbjct: 240 HNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSA 273
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/534 (42%), Positives = 333/534 (62%), Gaps = 4/534 (0%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLKPDSF 132
+Y CG D K+FD++ K++V WTA+I+ Y EEA+ +F+++ GL DS
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++V V +A QLGD+ A +HGY + V S++ ++ KCGN EKAR VFD M
Sbjct: 61 AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
E+D++SW+SM+ GY NG EAL +F M+ + +P T + ++SACA LG LG
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM--KDKDQVVWNAVVSGLSM 310
F+ + + L L+DMYAKCG + +A +F + +++ WN ++SG M
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+G+ K A +F ++++ G++PN TF +L C+HAGL+DEGR+ F M R+ S+T +
Sbjct: 241 HGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRL-SVTLEDK 299
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
H+ C+VD+LGR+G L EA +LIK MP P+ VWGALL C++H +L + + L+ L
Sbjct: 300 HHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQL 359
Query: 431 EPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNS 490
EP ++G YVL+SNIY+AS+KW + K+R M +KG++K S +E + F D
Sbjct: 360 EPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQE 419
Query: 491 HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTA 550
+P ++Y K++ LA ++K AG+VP L D+EEE+K+ L HSEKLA+AFG++
Sbjct: 420 NPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLKID 479
Query: 551 PKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P VIR+ KNLRVC DCH A K IS I R+IIVRD NRFH F G+CSCKD+W
Sbjct: 480 PGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 171/344 (49%), Gaps = 6/344 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI + + + A+ + M+ E G L + V A + D + H +
Sbjct: 29 MITAYEQAEKPEEALILFKKMQQEEGLLADSIAVVSVASAVGQLGDVKNAHTVHGYAFRK 88
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L + V S+L ++ CG A VFD + +++V+SW +++SGY G EA+ +F
Sbjct: 89 SLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEALLLF 148
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +P + + +++AC LG + H ++ ++ + ++ +L+D+YAKC
Sbjct: 149 DEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKC 208
Query: 180 GNMEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
G++EKA +F+ +P E++ SW+ +I GY +G KEAL++F MQ E ++P ++T
Sbjct: 209 GDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFTFTS 268
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD-K 296
+LSAC+ G ++ G + M+R ++DM + G + +A + +EM
Sbjct: 269 ILSACSHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPP 328
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
VW A++ ++G +++ L + ++PN + L+
Sbjct: 329 SDGVWGALLLACKIHGNMELGKTAASNLLQ--LEPNHTGYYVLM 370
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/596 (36%), Positives = 348/596 (58%)
Query: 9 DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK 68
D +++ + M+ E +P +T+P +LK C R D +LG + HS I+K + +V
Sbjct: 452 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVC 511
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+ L+++Y G L A + K+VVSWT +I+GY ++A+ FR++L RG++
Sbjct: 512 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 571
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
D + ++AC L L + IH +G ++ +LV LY+KCGN+E+A
Sbjct: 572 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLA 631
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F+Q D ++W++++ G+ +G +EAL +F M RE + +T + A + +
Sbjct: 632 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANM 691
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+ G + + + + S + +I MYAKCG ++ A K F E+ K++V WNA+++
Sbjct: 692 KQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAY 751
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
S +G+ A F Q+ ++PN T VG+L C+H GLVD+G ++F SM+ + L P
Sbjct: 752 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPK 811
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
EHY C+VD+L R+G L A + I MP+EP+A+VW LL+ C +HK ++ E + L+
Sbjct: 812 PEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLL 871
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
LEP +S YVLLSN+Y+ KW+ R M +KG++K G SW+EV +H F VGD
Sbjct: 872 ELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 931
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
+HPL+++I+ +L + G+V +L ++++E+K + HSEKLA++FGL++
Sbjct: 932 QNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLS 991
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I + KNLRVC DCH+ IK +SK++ REIIVRD RFH F G+CSCKD+W
Sbjct: 992 LPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 221/452 (48%), Gaps = 3/452 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N+C AI + M G +PT + F VL AC + ++G + H L++K G
Sbjct: 242 MISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 301
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V +L++LY H G L A +F ++ ++ V++ +I+G G E+A+ +F+
Sbjct: 302 FSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 361
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ GL+PDS ++ ++ AC+ G L + + +H Y + G N + +L++LYAKC
Sbjct: 362 RMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCS 421
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A F + +++V W+ M+ Y + + +F MQ E + P YT +L
Sbjct: 422 DIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 481
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C LG LELG S + + F N + + LIDMYAK G++ A + KD V
Sbjct: 482 TCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 541
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G + + A F Q+ GI+ + + C + EG+Q ++ +
Sbjct: 542 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQA 600
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V + + +V L + G ++EA+ + N I W AL++G + + A
Sbjct: 601 CVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEA 659
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
V ++ E +S N+ S + +AS N
Sbjct: 660 LRVFARM-NREGIDSNNFTFGSAVKAASETAN 690
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 214/431 (49%), Gaps = 7/431 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKAC-AREHDFQLGVRSHSLIVKA 59
MI+ S + M NE P TF VL+AC F + + H+ I+
Sbjct: 140 MIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQ 199
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL V L++LY G++ A +VFD + K+ SW A+ISG EAI +F
Sbjct: 200 GLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLF 259
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ P ++ VL+AC ++ L + +HG V + G + +V +LV LY
Sbjct: 260 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 319
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ A +F M ++D V+++++I G + G+ ++A+++F MQ + L+P+ T+ ++
Sbjct: 320 GSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLV 379
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+S G L G ++ + F SN + L+++YAKC + A F E + ++ V
Sbjct: 380 VACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVV 439
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+WN ++ + ++ +F +F Q++ I PN T+ +L C G ++ G Q
Sbjct: 440 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH--- 496
Query: 360 SRVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
S++ + + Y C ++D+ + G+LD A +++ + + + W ++AG +
Sbjct: 497 SQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFD 555
Query: 418 DLAEHVLNQLI 428
D A Q++
Sbjct: 556 DKALTTFRQML 566
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 212/422 (50%), Gaps = 18/422 (4%)
Query: 19 NSMRNEGFLPTNFTFPFVLKACAREH-DFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVH 77
+S+ N G P + T ++L+ C + + G + HS I+K G D + + LL+ Y+
Sbjct: 56 DSVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLF 115
Query: 78 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
G L ALKVFD++P++ + +W +I + + +F R+++ + P+ + V
Sbjct: 116 KGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGV 175
Query: 138 LTACTQLGDLS--TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
L AC + G ++ + IH + G G++ V L+DLY++ G +++ARRVFD + K
Sbjct: 176 LEAC-RGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLK 234
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
D SW +MI G + N EA+ +F +M + P Y VLSAC + +LE+G
Sbjct: 235 DHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 294
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
+ + F S+ + L+ +Y G + A +F M +D V +N +++GLS GY +
Sbjct: 295 GLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 354
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGC 374
A +F +++ G++P+ NT L+ C+ G + G+Q +++ F+ IE G
Sbjct: 355 KAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIE--GA 412
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC----------RLHKKTDLAEHVL 424
+++L + ++ A +E N ++W +L R+ ++ + E V
Sbjct: 413 LLNLYAKCSDIETALNYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 471
Query: 425 NQ 426
NQ
Sbjct: 472 NQ 473
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 156/309 (50%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A+ + M + G + ACA + G + H+ +G
Sbjct: 545 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 604
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + +L+ LY CG + +A F+ + ++W A++SG+ GN EEA+ +F
Sbjct: 605 FSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFA 664
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+ ++F+ + A ++ ++ K +H + + G V +++ +YAKCG
Sbjct: 665 RMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCG 724
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A++ F ++ K+ VSW++MI Y+ +GF EALD F M N++P + T+VGVLS
Sbjct: 725 SISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 784
Query: 241 ACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ +G ++ G+ + S P ++DM + G +++A EM + D
Sbjct: 785 ACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDA 844
Query: 299 VVWNAVVSG 307
+VW ++S
Sbjct: 845 LVWRTLLSA 853
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/604 (37%), Positives = 350/604 (57%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + NDC ++A ++ MR G P F VLKA LG H +K
Sbjct: 234 MVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTL 293
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V +LL++Y CG + DA F+ IP +V+ + +IS Y E+A +F
Sbjct: 294 NDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFL 353
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RL+ + P+ +S+ VL ACT + L K IH + + G ++FV +L+D YAKC
Sbjct: 354 RLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN 413
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M+ + ++F + + + VSW++++ G++ +G +EAL +F MQ + T VL
Sbjct: 414 DMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLR 473
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACAS ++ +E++ F ++ V+G +LID YAKCG + A KVF+ + ++D +
Sbjct: 474 ACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIIS 533
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++SG +++G A +F ++ K ++ N TFV LL C+ GLV+ G F+SM
Sbjct: 534 WNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMR 593
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P +EHY C+V LLGR+G+L++A + I +P P+A+VW ALL+ C +HK L
Sbjct: 594 IDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALG 653
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+++ +EP + YVLLSN+Y+A+ + A +R M + G++K+ G SWVE+ G
Sbjct: 654 RFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGE 713
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H F VG HP I + L+ L K G++P + VL D+++E+K L HSE+L
Sbjct: 714 IHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERL 773
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
ALA+GL+ T P IRI KNLR C DCH A +ISKI REIIVRD NRFH F +G CSC
Sbjct: 774 ALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSC 833
Query: 601 KDFW 604
D+W
Sbjct: 834 GDYW 837
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 205/418 (49%), Gaps = 4/418 (0%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
F+ A + +R EG F +LK L HS K G D + FV +
Sbjct: 143 FEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSG 202
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++ Y C ++DA VF+ I K+ V WTA++S Y E A +F ++ G KP+
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPN 262
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
F++ VL A L + K IHG + V +L+D+YAKCG+++ AR F+
Sbjct: 263 PFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFE 322
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+P D++ S MI YA + ++A ++F + R ++ P Y++ VL AC ++ L+
Sbjct: 323 MIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDF 382
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + + S+ +G L+D YAKC M + K+F ++D ++V WN +V G S
Sbjct: 383 GKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQ 442
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-VFSLTPMI 369
+G + A VF +++ + T+ +L C + Q S+ + F+ +I
Sbjct: 443 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 502
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ ++D + G + +A ++ + + ME + I W A+++G LH + A + +++
Sbjct: 503 GN--SLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALHGQAADALELFDRM 557
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 177/376 (47%), Gaps = 4/376 (1%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGL--DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
L+ C D + G H +V+ G D F LLN+Y G LA A ++FD +P++
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
N+VS+ ++ + G+ E A +FRRL G + + F + +L + A +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
+ G N FV + L+D Y+ C + A VF+ + KD V W++M+ Y+ N P+
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
A +F M+ KP + + VL A L ++ LG + + P +G L+
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
DMYAKCG + A F + D ++ + ++S + + + AF +F +L + + PN
Sbjct: 306 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 365
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
+ +L CT+ +D G+Q N ++ + + M D + +D + ++ S
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALM-DFYAKCNDMDSSLKIFSS 424
Query: 395 MPMEPNAIVWGALLAG 410
+ + N + W ++ G
Sbjct: 425 L-RDANEVSWNTIVVG 439
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 5/272 (1%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGR-NVFVATSLVDLYAKCGNMEKARR 187
DSF+ R L C GD + +HG+ V G GR ++F A L+++Y K G + ARR
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
+FD+MPE+++VS+ +++Q +A G + A +F ++ E + + + +L ++ A
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
L S + N +G+ LID Y+ C ++ A VF + KD VVW A+VS
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT- 366
S N + AF VF ++ G +PN +L V G+ + + T
Sbjct: 238 YSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTE 297
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
P + G ++D+ + G + +A + +P +
Sbjct: 298 PHVG--GALLDMYAKCGDIKDARLAFEMIPYD 327
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/580 (39%), Positives = 337/580 (58%), Gaps = 43/580 (7%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D+ T+++ YV G + A VF+++ K V W A+ISGY++ G EA +FRR++
Sbjct: 227 DDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMV 286
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG--------YVNEAGKGRNVFVATSLVDL 175
+ D F+ VL+AC +G + K +HG +V EA + V +LV
Sbjct: 287 LERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAA----LPVNNALVTF 342
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSS-------------------------------MI 204
Y+KCGN+ ARR+FD M KD+VSW++ M+
Sbjct: 343 YSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMV 402
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GY GF ++AL +F M+ EN+KP YT G ++AC LGAL+ G + + F
Sbjct: 403 SGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFE 462
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ G LI MYA+CG + +A +F M + D V WNA++S L +G+ + A +F ++
Sbjct: 463 GSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRM 522
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
GI P+ +F+ +L C H+GLVDEG ++F SM R F + P +HY ++DLLGR+G+
Sbjct: 523 VAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGR 582
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
+ EA +LIK+MP EP +W A+L+GCR +L H +QL + P + G Y+LLSN
Sbjct: 583 IGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNT 642
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
YSA+ W DAA++R +M D+G++K GCSW+E VH FLVGD HP + ++Y L+ +
Sbjct: 643 YSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMV 702
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
K++ G+VP T VL D+E +K++ L HSE+LA+ FGL+ P + + KNLR+C
Sbjct: 703 GAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRIC 762
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH AI +SK GREI+VRD RFH F +G CSC ++W
Sbjct: 763 DDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 186/391 (47%), Gaps = 39/391 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK-- 58
MI G+V + A E + M E FTF VL ACA F G H I++
Sbjct: 265 MISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQ 324
Query: 59 ------AGLDCDEFVKT---------------------------SLLNLYVHCGYLADAL 85
A L + + T ++L+ YV L A+
Sbjct: 325 PNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAV 384
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+VF+++P KN +SW ++SGY++ G E+A+ +F ++ +KP ++ + AC +LG
Sbjct: 385 EVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELG 444
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
L K +HG++ + G + +L+ +YA+CG +++A +F MP D VSW++MI
Sbjct: 445 ALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMIS 504
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN-EFL 264
+G +EAL++F M E + P+ + + VL+AC G ++ G M+R+ +
Sbjct: 505 ALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGII 564
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
T LID+ + GR+ +A + + M + +W A++SG +G +++ Q
Sbjct: 565 PGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQ 624
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGL-VDEGR 353
L K Q +G T++ L + AG VD R
Sbjct: 625 LFKMTPQHDG-TYILLSNTYSAAGCWVDAAR 654
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 186/435 (42%), Gaps = 76/435 (17%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 126
TSL+ Y L A+ FD +P ++ V A+IS Y + A+ +FR LL G
Sbjct: 92 TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 127 -LKPDSFSIVRVLTACTQLGDLST--AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
L+PD +S +L+A L ++S +H V ++G G + V +LV LY KC + E
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211
Query: 184 K---ARRVFDQMPEKDIVSWSS-------------------------------MIQGYAS 209
AR+V D+MP KD ++W++ MI GY
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVH 271
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG--VWASSFMERNEFLSNP 267
+G EA ++F M E + + +T VLSACA++G G V + F+
Sbjct: 272 SGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEA 331
Query: 268 VL--GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG------------------ 307
L L+ Y+KCG +A A ++F M KD V WN ++SG
Sbjct: 332 ALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391
Query: 308 --------LSMNGYVKVAFG-----VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+ ++GYV F +F ++ ++P T+ G + C G + G+Q
Sbjct: 392 YKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQ 451
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ ++ ++ + R G + EAH + MP +++ W A+++ H
Sbjct: 452 LHGHIVQL-GFEGSNSAGNALITMYARCGAVKEAHLMFLVMP-NIDSVSWNAMISALGQH 509
Query: 415 KKTDLAEHVLNQLIA 429
A + ++++A
Sbjct: 510 GHGREALELFDRMVA 524
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 112/284 (39%), Gaps = 43/284 (15%)
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNM-QR 225
ATSLV YA + A FD +P +D V +++I YA A+ +F ++
Sbjct: 91 ATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGR- 282
+L+P+ Y+ +LSA L + + A + + L L+ +Y KC
Sbjct: 151 GSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESP 210
Query: 283 --MAQACKVFREMKDKD-------------------------------QVVWNAVVSGLS 309
A KV EM +KD VVWNA++SG
Sbjct: 211 EATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYV 270
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV---FSLT 366
+G AF +F ++ + + TF +L C + GL G+ + R+ F
Sbjct: 271 HSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPE 330
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ +V + G + A + +M ++ + + W +L+G
Sbjct: 331 AALPVNNALVTFYSKCGNIAVARRIFDNMTLK-DVVSWNTILSG 373
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/605 (37%), Positives = 353/605 (58%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ +V N CF+ +++ + M +GF+P N+TF LKA F H I+K
Sbjct: 218 IVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTC 277
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D V LL LY G ++DA KVF+++P +VV W+ +I+ + G +A+++F
Sbjct: 278 YELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFI 337
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ + P+ F++ +L C + +HG V + G +V+V+ +L+D+YAKC
Sbjct: 338 RMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCE 397
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
M+ A ++F ++ K++VSW+++I GY + G +AL+MF R + T L
Sbjct: 398 KMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALG 457
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL ++ELGV + + +LIDMYAKCG + A VF EM+ D
Sbjct: 458 ACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVAS 517
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++SG S +G + A +F ++ +PNG TF+G+L GC++AGL+D+G+ F SM
Sbjct: 518 WNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMI 577
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P +EHY CMV L GRSGQLD+A LI+ +P EP+ ++W A+L+ + A
Sbjct: 578 CDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFA 637
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+++ + P + YVLLSN+Y+ + +W + A IR M +KG++K G SW+E G
Sbjct: 638 RRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGD 697
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F VG + HP + I L+ L K AG+VP + VL D+++EEK L HSE+L
Sbjct: 698 VHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERL 757
Query: 541 ALAFGLI-TTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
ALA+GL+ + ++ I I KNLR+C DCH A+K+IS I R++++RD NRFH F G CS
Sbjct: 758 ALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCS 817
Query: 600 CKDFW 604
C D W
Sbjct: 818 CDDHW 822
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 187/403 (46%), Gaps = 2/403 (0%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
Q + Y+ + EG F LK ++ HS IVK G D + FV +L
Sbjct: 128 QDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAAL 187
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+N Y CG + A VF+ I K++V W I+S Y+ G E+++ + R+ G P++
Sbjct: 188 INAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNN 247
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++ L A LG AK +HG + + + V L+ LY + G+M A +VF++
Sbjct: 248 YTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNE 307
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
MP+ D+V WS MI + NGF +A+D+F M+ + P +T+ +L+ CA LG
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + F + + LID+YAKC +M A K+F E+ K+ V WN V+ G
Sbjct: 368 EQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENL 427
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G A +F + + + TF L C ++ G Q + ++ + +
Sbjct: 428 GEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQ-VHGLAIKTNNAKRVAV 486
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++D+ + G + A + M + W AL++G H
Sbjct: 487 SNSLIDMYAKCGDIKVAQTVFNEME-TIDVASWNALISGYSTH 528
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 176/376 (46%), Gaps = 8/376 (2%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+ C R++D H I+K G D F LLN YV G+ DAL +FD++P++N
Sbjct: 55 MLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
VS+ + GY ++ + ++ RL G + + L L W+H
Sbjct: 115 NVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHS 170
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ + G N FV +L++ Y+ CG+++ AR VF+ + KDIV W+ ++ Y NG ++
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFED 230
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
+L + M + P YT L A LGA + + + +P +G L+
Sbjct: 231 SLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQ 290
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y + G M+ A KVF EM D V W+ +++ NG+ A +F ++ + + PN T
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFT 350
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
+L GC G Q + +V F L + + ++D+ + ++D A +L
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSN--ALIDVYAKCEKMDTAVKLFAE 408
Query: 395 MPMEPNAIVWGALLAG 410
+ N + W ++ G
Sbjct: 409 LS-SKNVVSWNTVIVG 423
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 163/377 (43%), Gaps = 50/377 (13%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
DS + +L C + D +AK IH + + G ++F L++ Y K G + A +F
Sbjct: 48 DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D+MPE++ VS+ ++ QGYA ++ + ++ + RE + + L SL E
Sbjct: 108 DEMPERNNVSYVTLTQGYAC----QDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
+ W S + + + SN +G LI+ Y+ CG + A VF + KD VVW +VS
Sbjct: 164 ICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYV 223
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTF--------------------------------- 336
NG + + + ++ G PN TF
Sbjct: 224 ENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPR 283
Query: 337 --VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
VGLL T G + + + FN M + + P + M+ ++G ++A ++
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPK-NDVVP----WSFMIARFCQNGFCNKAVDIFIR 338
Query: 395 MP---MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV--LLSNIYSASH 449
M + PN ++L GC + K + L E L+ L+ ++ YV L ++Y+
Sbjct: 339 MREGFVVPNEFTLSSILNGCAIGKCSGLGEQ-LHGLVVKVGFDLDVYVSNALIDVYAKCE 397
Query: 450 KWNDAAKIRSMMGDKGI 466
K + A K+ + + K +
Sbjct: 398 KMDTAVKLFAELSSKNV 414
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/491 (46%), Positives = 321/491 (65%), Gaps = 11/491 (2%)
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L GL D F +L + GDL +A+ + +++G +++ S+V+ YAK G
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRV---FDDSG-SKDLPAWNSVVNAYAKAG 142
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-----LKPEYYTM 235
++ AR++FD+MPE++++SWS +I GY G KEALD+F MQ ++P +TM
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
VLSAC LGALE G W +++++ + VLGT LIDMYAKCG + +A +VF +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 296 KDQV-VWNAVVSGLSMNGYVKVAFGVFGQLEKC-GIQPNGNTFVGLLCGCTHAGLVDEGR 353
K V ++A++ L+M G F +F ++ I PN TFVG+L C H GL++EG+
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+F M F +TP I+HYGCMVDL GRSG + EA I SMPMEP+ ++WG+LL+G R+
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
E L +LI L+P NSG YVLLSN+Y+ + +W + IR M KGI K+ GCS
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
+VEV+GVVHEF+VGD S SE+IY+ LDE+ +L+ AG+V T VL D+ E++K+ L
Sbjct: 443 YVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIAL 502
Query: 534 ACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF 593
+ HSEKLA+AF L+ T P +RI KNLR+CGDCH +K+ISK+ REI+VRD NRFH F
Sbjct: 503 SYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHF 562
Query: 594 IEGSCSCKDFW 604
+GSCSC+DFW
Sbjct: 563 RDGSCSCRDFW 573
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 188/361 (52%), Gaps = 44/361 (12%)
Query: 6 VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
VS+ I Y MRN P TFPF+L + LG R+H+ I+ GLD D
Sbjct: 38 VSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDP 97
Query: 66 FVKTSLLNLYVHCGYLA-------------------------------DALKVFDDIPDK 94
FV+TSLLN+Y CG L DA K+FD++P++
Sbjct: 98 FVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER 157
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLL-----HRGLKPDSFSIVRVLTACTQLGDLST 149
NV+SW+ +I+GY+ G +EA+++FR + ++P+ F++ VL+AC +LG L
Sbjct: 158 NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQ 217
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM-PEKDIVSWSSMIQGYA 208
KW+H Y+++ ++ + T+L+D+YAKCG++E+A+RVF+ + +KD+ ++S+MI A
Sbjct: 218 GKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLA 277
Query: 209 SNGFPKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSF-MERNEFLSN 266
G E +F M +N+ P T VG+L AC G + G S F M EF
Sbjct: 278 MYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG--KSYFKMMIEEFGIT 335
Query: 267 PVLGT--TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
P + ++D+Y + G + +A M + D ++W +++SG M G +K G +
Sbjct: 336 PSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKR 395
Query: 324 L 324
L
Sbjct: 396 L 396
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/569 (40%), Positives = 343/569 (60%), Gaps = 1/569 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L + R G + H+ I+K+GL V L+N Y + +VF++ K+
Sbjct: 60 LLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKS 119
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+W+++IS + AI F R++ L PD AC LG K +H
Sbjct: 120 STTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHC 179
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
V + G +VFV +SLVD+YAKCG++++AR VFD+MP +++VSWS MI GY G +E
Sbjct: 180 LVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEE 239
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
A+ +F E L +T+ V+ C S LELG + + + +G++LI
Sbjct: 240 AMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLIS 299
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y+KCG + A +VF E+ K+ +WNA++ + + + K AF +F ++E G++PN T
Sbjct: 300 LYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFIT 359
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
F+ +L C+HAGLV+EG+++F M + + + P +HY MVDLLGR+G+L EA +IK M
Sbjct: 360 FLCVLYACSHAGLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALSVIKGM 418
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
P EP VWGA + GCR+H TDLA +++ L +SG +V+LSN Y+A+ ++ DAA
Sbjct: 419 PTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAA 478
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
K R M+ D+G++K G SW+E VH+F GD H ++IY KL++L +++ AG+V
Sbjct: 479 KARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVA 538
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
T VL ++ EEK + HSE+LA+AFGLI+ IRI KNLRVCGDCH AIK IS
Sbjct: 539 DTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFIS 598
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K++GR IIVRDNNRFH F +G CSC D+W
Sbjct: 599 KLSGRVIIVRDNNRFHRFEDGKCSCADYW 627
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 173/318 (54%), Gaps = 1/318 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F N+ AI+++ M E P + FP KACA +G H L++K G
Sbjct: 126 VISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTG 185
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FV +SL+++Y CG + +A VFD++P +NVVSW+ +I GY G EEA+ +F+
Sbjct: 186 YDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFK 245
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L GL + F++ V+ C L K IHG + + FV +SL+ LY+KCG
Sbjct: 246 EALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCG 305
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E A RVFD++P K++ W++M+ A + KEA D+F M+ ++P + T + VL
Sbjct: 306 LIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLY 365
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM-KDKDQV 299
AC+ G +E G + M++ E +++D+ + G++ +A V + M + +
Sbjct: 366 ACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTES 425
Query: 300 VWNAVVSGLSMNGYVKVA 317
VW A ++G ++G +A
Sbjct: 426 VWGAFITGCRIHGNTDLA 443
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 152/320 (47%), Gaps = 11/320 (3%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
I +L + T+ L + IH ++ ++G V L++ Y+K + +VF++
Sbjct: 57 ICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESE 116
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
K +WSS+I +A N P A+ F M ENL P+ + ACA LG ++G
Sbjct: 117 RKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKS 176
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ + + + +G++L+DMYAKCG + +A VF EM ++ V W+ ++ G + G
Sbjct: 177 VHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGE 236
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SMSRVFSLTPMIEHY 372
+ A +F + G+ N T ++ C A L++ G+Q + L+ +
Sbjct: 237 HEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVG-- 294
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL--IAL 430
++ L + G ++ A+ + +P++ N +W A+L C H T A + ++ +
Sbjct: 295 SSLISLYSKCGLIEGAYRVFDEVPIK-NLGMWNAMLIACAQHAHTKEAFDLFTKMENAGM 353
Query: 431 EPWNSGNYV-LLSNIYSASH 449
P N++ L +Y+ SH
Sbjct: 354 RP----NFITFLCVLYACSH 369
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/517 (43%), Positives = 326/517 (63%), Gaps = 6/517 (1%)
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+P + S ++ + + A+ + RR L PD+ + +L AC +L L
Sbjct: 85 LPSPDPFSLNTVLRIFASSARPRVALALHRRHL---APPDTHTYPPLLQACARLLALRYG 141
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYA 208
+ +H + G VFV SLV LY CG E A RVFD++P E+++VSW+S++ G+A
Sbjct: 142 EGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFA 201
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+NG P E L +F M P+ +T+V VL+ACA +G L LG F+ + + N
Sbjct: 202 ANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAH 261
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKC 327
G LID+YAKCG + A K+F EM VV W +++ GL++NG+ A +F +E+
Sbjct: 262 AGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMERE 321
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+ P T VG+L C+H GLVD+G ++F+ M + +TP IEH GCMVDLLGR+G+++E
Sbjct: 322 KLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEE 381
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
AH I +MP+EPNA+VW LL C +HKK ++ E +L+ L+P +SG+YVLLSN+Y+
Sbjct: 382 AHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAG 441
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+W D +R M G++K G S VE+ V+EF++GD SHP +++IY L ++A +
Sbjct: 442 VGRWADVHVLRKTMVTHGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEMLGDIAER 501
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ G++P T +VL DIE+EEK+ L HSE+LA+AF L+ + P IRI KNLRVCGDC
Sbjct: 502 LRRQGYIPHTSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRIVKNLRVCGDC 561
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H AIKLISK+ REIIVRD +RFH F G+CSCKD+W
Sbjct: 562 HMAIKLISKVYDREIIVRDRSRFHHFKGGACSCKDYW 598
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 172/303 (56%), Gaps = 7/303 (2%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P T+P +L+ACAR + G H+ K GL FVK SL++LY CG A +V
Sbjct: 120 PDTHTYPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRV 179
Query: 88 FDDI--PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
FD+I P++N+VSW ++++G+ G E + +FR +L PD F++V VLTAC ++G
Sbjct: 180 FDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIG 239
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
L+ + +H +V + G N +L+DLYAKCG ++ AR++F +M + +VSW+S+I
Sbjct: 240 VLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLI 299
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G A NGF +AL +F M+RE L P TMVGVL AC+ G ++ G M + E+
Sbjct: 300 VGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQM-KAEYG 358
Query: 265 SNPVLGTT--LIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVF 321
P + ++D+ + GR+ +A M + + VVW ++ +M+ +++ +
Sbjct: 359 ITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAW 418
Query: 322 GQL 324
+L
Sbjct: 419 ARL 421
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 3/207 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GF +N + + M F P FT VL ACA LG R H + K G
Sbjct: 196 VLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVG 255
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
L + +L++LY CG + DA K+F ++ + VVSWT++I G G +A+ +F
Sbjct: 256 LVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLF 315
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ L P ++V VL AC+ G + ++ E G + +VDL +
Sbjct: 316 SMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGR 375
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMI 204
G +E+A MP E + V W +++
Sbjct: 376 AGRVEEAHNYITTMPLEPNAVVWRTLL 402
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/596 (36%), Positives = 347/596 (58%)
Query: 9 DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK 68
D +++ + M+ E +P +T+P +LK C R D +LG + HS I+K + +V
Sbjct: 429 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 488
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+ L+++Y G L A + K+VVSWT +I+GY ++A+ FR++L RG++
Sbjct: 489 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 548
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
D + ++AC L L + IH +G ++ +LV LY++CG +E++
Sbjct: 549 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 608
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F+Q D ++W++++ G+ +G +EAL +F M RE + +T + A + +
Sbjct: 609 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 668
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+ G + + + + S + LI MYAKCG ++ A K F E+ K++V WNA+++
Sbjct: 669 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY 728
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
S +G+ A F Q+ ++PN T VG+L C+H GLVD+G +F SM+ + L+P
Sbjct: 729 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 788
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
EHY C+VD+L R+G L A E I+ MP++P+A+VW LL+ C +HK ++ E + L+
Sbjct: 789 PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 848
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
LEP +S YVLLSN+Y+ S KW+ R M +KG++K G SW+EV +H F VGD
Sbjct: 849 ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 908
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
+HPL+++I+ +L + G+V +L +++ E+K + HSEKLA++FGL++
Sbjct: 909 QNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 968
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I + KNLRVC DCH IK +SK++ REIIVRD RFH F G+CSCKD+W
Sbjct: 969 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 221/452 (48%), Gaps = 3/452 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N+C AI + M G +PT + F VL AC + ++G + H L++K G
Sbjct: 219 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 278
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V +L++LY H G L A +F ++ ++ V++ +I+G G E+A+ +F+
Sbjct: 279 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 338
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ GL+PDS ++ ++ AC+ G L + +H Y + G N + +L++LYAKC
Sbjct: 339 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 398
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A F + +++V W+ M+ Y + + +F MQ E + P YT +L
Sbjct: 399 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 458
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C LG LELG S + + F N + + LIDMYAK G++ A + KD V
Sbjct: 459 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 518
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G + + A F Q+ GI+ + + C + EG+Q ++ +
Sbjct: 519 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQA 577
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V + + +V L R G+++E++ + N I W AL++G + + A
Sbjct: 578 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEA 636
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
V ++ E ++ N+ S + +AS N
Sbjct: 637 LRVFVRM-NREGIDNNNFTFGSAVKAASETAN 667
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 208/422 (49%), Gaps = 18/422 (4%)
Query: 19 NSMRNEGFLPTNFTFPFVLKACAREH-DFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVH 77
+S+ N G P + T ++L+ C + + G + HS I+K GLD + + L + Y+
Sbjct: 33 DSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLF 92
Query: 78 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
G L A KVFD++P++ + +W +I + + E +F R++ + P+ + V
Sbjct: 93 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 152
Query: 138 LTACTQLGDLS--TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
L AC + G ++ + IH + G + V L+DLY++ G ++ ARRVFD + K
Sbjct: 153 LEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 211
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
D SW +MI G + N EA+ +F +M + P Y VLSAC + +LE+G
Sbjct: 212 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 271
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
+ + F S+ + L+ +Y G + A +F M +D V +N +++GLS GY +
Sbjct: 272 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 331
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGC 374
A +F ++ G++P+ NT L+ C+ G + G+Q +++ F+ IE G
Sbjct: 332 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GA 389
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC----------RLHKKTDLAEHVL 424
+++L + ++ A + +E N ++W +L R+ ++ + E V
Sbjct: 390 LLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 448
Query: 425 NQ 426
NQ
Sbjct: 449 NQ 450
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 213/431 (49%), Gaps = 7/431 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKAC-AREHDFQLGVRSHSLIVKA 59
MI+ S + + M +E P TF VL+AC F + + H+ I+
Sbjct: 117 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 176
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL V L++LY G++ A +VFD + K+ SW A+ISG EAI +F
Sbjct: 177 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 236
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ P ++ VL+AC ++ L + +HG V + G + +V +LV LY
Sbjct: 237 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 296
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+ A +F M ++D V+++++I G + G+ ++A+++F M + L+P+ T+ ++
Sbjct: 297 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 356
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC++ G L G ++ + F SN + L+++YAKC + A F E + ++ V
Sbjct: 357 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 416
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+WN ++ + ++ +F +F Q++ I PN T+ +L C G ++ G Q
Sbjct: 417 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH--- 473
Query: 360 SRVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
S++ + Y C ++D+ + G+LD A +++ + + + W ++AG +
Sbjct: 474 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFD 532
Query: 418 DLAEHVLNQLI 428
D A Q++
Sbjct: 533 DKALTTFRQML 543
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 158/309 (51%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A+ + M + G + ACA + G + H+ +G
Sbjct: 522 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 581
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + +L+ LY CG + ++ F+ + ++W A++SG+ GN EEA+ +F
Sbjct: 582 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 641
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+ ++F+ + A ++ ++ K +H + + G V +L+ +YAKCG
Sbjct: 642 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 701
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A + F ++ K+ VSW+++I Y+ +GF EALD F M N++P + T+VGVLS
Sbjct: 702 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 761
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQ 298
AC+ +G ++ G+ M LS P ++DM + G +++A + +EM K D
Sbjct: 762 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 821
Query: 299 VVWNAVVSG 307
+VW ++S
Sbjct: 822 LVWRTLLSA 830
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 159/349 (45%), Gaps = 42/349 (12%)
Query: 101 AIISGYINEGNLEEAINMFR--RLLHRGLKPDSFSIVRVLTACTQL-GDLSTAKWIHGYV 157
A IS YI+E +E+ R + +RG++P+ ++ +L C + G L + +H +
Sbjct: 15 AAISVYISE---DESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQI 71
Query: 158 NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G N ++ L D Y G++ A +VFD+MPE+ I +W+ MI+ AS E
Sbjct: 72 LKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVF 131
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS--SFMERNEFLSNPVLGTTLID 275
+F M EN+ P T GVL AC G++ V + + + V+ LID
Sbjct: 132 GLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLID 190
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y++ G + A +VF ++ KD W A++SGLS N A +F + GI P
Sbjct: 191 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 250
Query: 336 FVGLLCGCTHAGLVDEGRQF--------FNS--------MSRVFSLTPMI--EH------ 371
F +L C ++ G Q F+S +S F L +I EH
Sbjct: 251 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 310
Query: 372 ------YGCMVDLLGRSGQLDEAHELIKSMP---MEPNAIVWGALLAGC 411
Y +++ L + G ++A EL K M +EP++ +L+ C
Sbjct: 311 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 359
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/598 (39%), Positives = 353/598 (59%), Gaps = 9/598 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ ++ MR G FT V+ AC D L + HS+ V +G D V +LL
Sbjct: 124 ALGLFSGMREMGLDMDGFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLT 181
Query: 74 LYVHCGYLADALKVFDDIPD-KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
Y G L DA +VF + ++ VSW ++I Y +A+ +F+ ++ RGL D F
Sbjct: 182 YYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMF 241
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN-MEKARRVFDQ 191
++ VLTA T L DLS HG + + G +N V + L+DLY+KCG M R+VF++
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301
Query: 192 MPEKDIVSWSSMIQGYASNG-FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+ E D+V W++M+ GY+ N F ++AL+ F MQ +P + V V+SAC++L +
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQ 361
Query: 251 GVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G S +++ SN + + LI MY+KCG + A ++F M + + V N++++G +
Sbjct: 362 GKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYA 421
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G + +F + + I P TF+ +L C H G V+EG +FN M F++ P
Sbjct: 422 QHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEA 481
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
EHY CM+DLLGR+G+L EA LI MP P +I W +LL CR H +LA NQ++
Sbjct: 482 EHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ 541
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
LEP N+ YV+LSN+Y+++ +W + A +R M D+G++K GCSW+EV +H F+ D+
Sbjct: 542 LEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDS 601
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEE---EKQYFLACHSEKLALAFGL 546
SHP+ ++IY L+E++ K+K AG+VP L + EK+ L HSEKLA+AFGL
Sbjct: 602 SHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGL 661
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I+T + + + KNLR+CGDCH AIK IS I GREI VRD +RFHCF EG CSC D+W
Sbjct: 662 ISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 191/416 (45%), Gaps = 37/416 (8%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
F +LK C E D G HSL +K+ + + + LY CG LA A K F DI
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 93 DKNVVSWTAIISGYINE-------------------------------GNLEEAINMFRR 121
D NV S+ AII+ Y E G A+ +F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ GL D F++ V+TAC D+ +H +G V V +L+ Y K G+
Sbjct: 131 MREMGLDMDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 182 MEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+RVF M +D VSW+SMI Y + +AL +F M R L + +T+ VL+
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC-KVFREMKDKDQV 299
A L L G+ + + F N +G+ LID+Y+KCG C KVF E+ + D V
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308
Query: 300 VWNAVVSGLSMN-GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+WN +VSG S N +++ A F Q++ G +PN +FV ++ C++ +G+Q +
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + I ++ + + G L +A L M E N + +++AG H
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHNTVSLNSMIAGYAQH 423
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 140/298 (46%), Gaps = 36/298 (12%)
Query: 1 MIRGFVSNDCF-QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+ G+ N+ F + A+E + M+ G+ P + +F V+ AC+ G + HSL +K+
Sbjct: 313 MVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKS 372
Query: 60 GLDCDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+ + V +L+ +Y CG L DA ++FD + + N VS ++I+GY G E++++
Sbjct: 373 DIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHL 432
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F+ +L R + P S + + VL+AC G + +G N F
Sbjct: 433 FQWMLERQIAPTSITFISVLSACAHTGRVE-------------EGWNYF----------- 468
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
NM K + F+ PE + +S MI G EA ++ M P +
Sbjct: 469 --NMMKEK--FNIEPEAE--HYSCMIDLLGRAGKLSEAENLIARMP---FNPGSIGWASL 519
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
L AC + G +EL V A++ + + E SN L +MYA GR + V + M+D+
Sbjct: 520 LGACRTHGNIELAVKAANQVLQLE-PSNAAPYVVLSNMYASAGRWEEVATVRKFMRDR 576
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 152/329 (46%), Gaps = 27/329 (8%)
Query: 95 NVVSWTA-----IISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
N +SWT ++ I E +L ++ + + P ++ + ++ G L+
Sbjct: 2 NQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAW 61
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
A+ +++ NVF +++ YAK A ++FDQ+PE D+VS++++I YA
Sbjct: 62 ARKAFQDISDP----NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYAD 117
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS----LGALELGVWASSFMERNEFLS 265
G AL +F M+ L + +T+ V++AC +G L +S F + ++S
Sbjct: 118 CGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGF---DSYVS 174
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKD-KDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ L+ Y K G + A +VF M +D+V WN+++ + A G+F ++
Sbjct: 175 ---VNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEM 231
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGC-MVDLLGR- 381
+ G+ + T +L T + G QF + + F H G ++DL +
Sbjct: 232 VRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQN---SHVGSGLIDLYSKC 288
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G + + ++ + + EP+ ++W +++G
Sbjct: 289 GGGMSDCRKVFEEI-TEPDLVLWNTMVSG 316
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/596 (36%), Positives = 347/596 (58%)
Query: 9 DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK 68
D +++ + M+ E +P +T+P +LK C R D +LG + HS I+K + +V
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+ L+++Y G L A + K+VVSWT +I+GY ++A+ FR++L RG++
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
D + ++AC L L + IH +G ++ +LV LY++CG +E++
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F+Q D ++W++++ G+ +G +EAL +F M RE + +T + A + +
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+ G + + + + S + LI MYAKCG ++ A K F E+ K++V WNA+++
Sbjct: 709 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY 768
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
S +G+ A F Q+ ++PN T VG+L C+H GLVD+G +F SM+ + L+P
Sbjct: 769 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
EHY C+VD+L R+G L A E I+ MP++P+A+VW LL+ C +HK ++ E + L+
Sbjct: 829 PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 888
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
LEP +S YVLLSN+Y+ S KW+ R M +KG++K G SW+EV +H F VGD
Sbjct: 889 ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 948
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
+HPL+++I+ +L + G+V +L +++ E+K + HSEKLA++FGL++
Sbjct: 949 QNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1008
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I + KNLRVC DCH IK +SK++ REIIVRD RFH F G+CSCKD+W
Sbjct: 1009 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 221/452 (48%), Gaps = 3/452 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N+C AI + M G +PT + F VL AC + ++G + H L++K G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V +L++LY H G L A +F ++ ++ V++ +I+G G E+A+ +F+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ GL+PDS ++ ++ AC+ G L + +H Y + G N + +L++LYAKC
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A F + +++V W+ M+ Y + + +F MQ E + P YT +L
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C LG LELG S + + F N + + LIDMYAK G++ A + KD V
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 558
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G + + A F Q+ GI+ + + C + EG+Q ++ +
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQA 617
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V + + +V L R G+++E++ + N I W AL++G + + A
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEA 676
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
V ++ E ++ N+ S + +AS N
Sbjct: 677 LRVFVRM-NREGIDNNNFTFGSAVKAASETAN 707
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 208/422 (49%), Gaps = 18/422 (4%)
Query: 19 NSMRNEGFLPTNFTFPFVLKACAREH-DFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVH 77
+S+ N G P + T ++L+ C + + G + HS I+K GLD + + L + Y+
Sbjct: 73 DSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLF 132
Query: 78 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
G L A KVFD++P++ + +W +I + + E +F R++ + P+ + V
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192
Query: 138 LTACTQLGDLS--TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
L AC + G ++ + IH + G + V L+DLY++ G ++ ARRVFD + K
Sbjct: 193 LEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
D SW +MI G + N EA+ +F +M + P Y VLSAC + +LE+G
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
+ + F S+ + L+ +Y G + A +F M +D V +N +++GLS GY +
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGC 374
A +F ++ G++P+ NT L+ C+ G + G+Q +++ F+ IE G
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GA 429
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC----------RLHKKTDLAEHVL 424
+++L + ++ A + +E N ++W +L R+ ++ + E V
Sbjct: 430 LLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 425 NQ 426
NQ
Sbjct: 489 NQ 490
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 213/431 (49%), Gaps = 7/431 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKAC-AREHDFQLGVRSHSLIVKA 59
MI+ S + + M +E P TF VL+AC F + + H+ I+
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL V L++LY G++ A +VFD + K+ SW A+ISG EAI +F
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ P ++ VL+AC ++ L + +HG V + G + +V +LV LY
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+ A +F M ++D V+++++I G + G+ ++A+++F M + L+P+ T+ ++
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC++ G L G ++ + F SN + L+++YAKC + A F E + ++ V
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+WN ++ + ++ +F +F Q++ I PN T+ +L C G ++ G Q
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH--- 513
Query: 360 SRVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
S++ + Y C ++D+ + G+LD A +++ + + + W ++AG +
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFD 572
Query: 418 DLAEHVLNQLI 428
D A Q++
Sbjct: 573 DKALTTFRQML 583
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 158/309 (51%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A+ + M + G + ACA + G + H+ +G
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 621
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + +L+ LY CG + ++ F+ + ++W A++SG+ GN EEA+ +F
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+ ++F+ + A ++ ++ K +H + + G V +L+ +YAKCG
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 741
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A + F ++ K+ VSW+++I Y+ +GF EALD F M N++P + T+VGVLS
Sbjct: 742 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 801
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQ 298
AC+ +G ++ G+ M LS P ++DM + G +++A + +EM K D
Sbjct: 802 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 861
Query: 299 VVWNAVVSG 307
+VW ++S
Sbjct: 862 LVWRTLLSA 870
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 159/349 (45%), Gaps = 42/349 (12%)
Query: 101 AIISGYINEGNLEEAINMFR--RLLHRGLKPDSFSIVRVLTACTQL-GDLSTAKWIHGYV 157
A IS YI+E +E+ R + +RG++P+ ++ +L C + G L + +H +
Sbjct: 55 AAISVYISE---DESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQI 111
Query: 158 NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G N ++ L D Y G++ A +VFD+MPE+ I +W+ MI+ AS E
Sbjct: 112 LKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVF 171
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS--SFMERNEFLSNPVLGTTLID 275
+F M EN+ P T GVL AC G++ V + + + V+ LID
Sbjct: 172 GLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLID 230
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y++ G + A +VF ++ KD W A++SGLS N A +F + GI P
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 336 FVGLLCGCTHAGLVDEGRQF--------FNS--------MSRVFSLTPMI--EH------ 371
F +L C ++ G Q F+S +S F L +I EH
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 372 ------YGCMVDLLGRSGQLDEAHELIKSMP---MEPNAIVWGALLAGC 411
Y +++ L + G ++A EL K M +EP++ +L+ C
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/604 (37%), Positives = 348/604 (57%), Gaps = 2/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + +++ + M +GF+P + ++AC + D Q+G H ++ +G
Sbjct: 294 MICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSG 352
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+CD L+++Y CG L A +VFD K+ V+W ++I+GY G +E + F+
Sbjct: 353 FECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK 412
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ KPDS + V +L+ +QL D++ + IH V + G + + SL+D+YAKCG
Sbjct: 413 -MMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCG 471
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
M+ +VF M DI+SW+++I M M+ E L P+ T++G+L
Sbjct: 472 EMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILP 531
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C+ L G ++ ++ F SN +G LI+MY+KCG + KVF+ MK+KD V
Sbjct: 532 MCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVT 591
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++S M G K A F +E G+ P+ F+ + C+H+G+V EG +FF+ M
Sbjct: 592 WTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMK 651
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++L P +EHY C+VDLL RSG L +A E I SMPM+P+A +WGALL+ CR T++A
Sbjct: 652 TDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIA 711
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ V +++ L ++G YVL+SNIY+ KW+ +R+ M KG++K G SW+E+
Sbjct: 712 QRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKR 771
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V+ F GD S +K+ L+ L + G+V L D+EE++K+ L HSE+L
Sbjct: 772 VYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERL 831
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL+ T P + + KNLRVCGDCH K I+KI REI+VRD NRFH F +G+CSC
Sbjct: 832 AIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSC 891
Query: 601 KDFW 604
D W
Sbjct: 892 GDHW 895
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 218/409 (53%), Gaps = 4/409 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR N F A+ +Y MR + P FTFP V+ +CAR D +LG H ++ G
Sbjct: 92 IIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMG 151
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D ++ +L+++Y L +A VF+++ +++ VSW ++ISGY + G E+A++M+
Sbjct: 152 FESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYH 211
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ PD F++ VL AC L + +HG + + G +V + L+ +Y K
Sbjct: 212 KFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFE 271
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +ARRVF +M KD V+W++MI GYA G + ++ +F +M + P+ ++ +
Sbjct: 272 RLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIR 330
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC G L++G + ++ + F + V LIDMYAKCG + A +VF K KD V
Sbjct: 331 ACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVT 390
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++++G + +GY K F ++ K +P+ TFV LL + +++GR +
Sbjct: 391 WNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVI 449
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ F + ++D+ + G++D+ ++ M + I W ++A
Sbjct: 450 K-FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIA 496
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 184/359 (51%), Gaps = 4/359 (1%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI-PDKNVVSWTAIISGYINEGN 111
HSLI+ +GL L++ Y ++ VF I P NV W +II + G
Sbjct: 42 HSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGL 101
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+A+ + + + L+PD+F+ V+ +C ++ DL +H + E G ++++ +
Sbjct: 102 FTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNA 161
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
L+D+Y++ +++ AR VF++M +D VSW+S+I GY SNGF ++ALDM++ + + P+
Sbjct: 162 LIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPD 221
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
+TM VL AC SL A++ GV +E+ + ++G L+ MY K R+ +A +VF
Sbjct: 222 CFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFS 281
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
+M KD V WN ++ G + G + + +F + G P+ + + C +G +
Sbjct: 282 KMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQV 340
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G+ F + ++D+ + G L A E+ + + +++ W +L+ G
Sbjct: 341 GK-FVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK-DSVTWNSLING 397
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/592 (39%), Positives = 345/592 (58%), Gaps = 48/592 (8%)
Query: 22 RNEGFLPTNFTFPFVLKACAR-------EHDFQLGVRS-HSLIVKAGLDC-DEFVKTSLL 72
R L +F+ ++A A D LG S H+ +K+G D FV+T+L+
Sbjct: 23 RAPRLLDNSFSLSLAMQASAALSASVPAMRDLGLGAASLHARALKSGFAAADLFVRTALV 82
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
Y G A FD+ P ++V +++ Y+ G + EA +F + R +
Sbjct: 83 EAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMRERDM----- 137
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+S IHGY A G ++ AR VF+ M
Sbjct: 138 --------------VSWNTMIHGY--------------------AVNGEVDLAREVFNGM 163
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
++D SWSSM+ Y K+AL+++ M+ + P+ TMV VLSAC+ +GAL +G
Sbjct: 164 DDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGA 223
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
F+E N + LGT LIDMYAKCG + + +VF M KD + W++++ GL+ +G
Sbjct: 224 EVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHG 283
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ A +F ++ G+QPN TF+G+L CTH GLV +G+++F+SMS V +TP ++HY
Sbjct: 284 FGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHY 343
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEP 432
GCMVDLLGRSG ++EA +LI+ MP EP+A++W ALL CR++K ++AE + +L L+P
Sbjct: 344 GCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDP 403
Query: 433 WNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHP 492
G+YVLLSNIY+ ++ W A++R + + IQ+I G S +E +HEF+ GD SHP
Sbjct: 404 HADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHP 463
Query: 493 LSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPK 552
S++IY L E+ +L+ AG+ P T VL DI+E+ K+ LA HSEKLA+AFGL+TT
Sbjct: 464 RSKEIYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKERALAEHSEKLAVAFGLLTTPAG 523
Query: 553 DVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+RI KNLR C DCH AIKLI+ + R++I+RD NRFH F EG CSCKD+W
Sbjct: 524 STLRITKNLRACEDCHSAIKLIALLYERKLIIRDRNRFHHFSEGRCSCKDYW 575
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 110/206 (53%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + + A+E + MR P T VL AC+ +G H + G
Sbjct: 174 MMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNG 233
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D + T+L+++Y CG + ++++VF +P K+V++W+++I G N G +A+++F
Sbjct: 234 VELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFS 293
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAKC 179
R+L GL+P+ + + VL +CT LG +S K ++ G V +VDL +
Sbjct: 294 RMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRS 353
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G++E+A+++ MP E D V W +++
Sbjct: 354 GHIEEAKQLIRDMPFEPDAVIWRALL 379
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/605 (36%), Positives = 353/605 (58%), Gaps = 3/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + N F +++M P T+ L++ ++G + HS +++G
Sbjct: 82 IISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSG 141
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + V T++ N+YV CG+L A VF+ + +KN V+WT I+ GY +A+ +F
Sbjct: 142 LGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFA 201
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++++ G++ D + VL AC L +L+ + IHG++ + G V V T LVD Y KC
Sbjct: 202 KMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCS 261
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+E A + F+ + E + VSWS++I GY G +EAL F +++ ++ +T +
Sbjct: 262 NLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQ 321
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC++L G A + ++ ++ + +I MY++CGR+ A +VF + D D V
Sbjct: 322 ACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVA 381
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A+++G + G A +F +++ CG++PN TF+ +L C+H+GLV EGRQ+ SMS
Sbjct: 382 WTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMS 441
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + I+HY CMVD+ R+G L EA ELI+SMP P+A+ W LL GC ++ ++
Sbjct: 442 SNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIG 501
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E L L+P ++ Y+L+ N+Y++ KW +AA +R MM ++ ++K CSW+ V G
Sbjct: 502 ELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGK 561
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELA-TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F+VGD HP +E+IYSKL+ L + +K + T + V + E ++Q L HSE+
Sbjct: 562 VHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTEEDVSNSLPERKEQ--LLVHSER 619
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LALAFGLI+T + + KNLR C DCH+ K +S ITGREI+VRD+ RFH F G CS
Sbjct: 620 LALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECS 679
Query: 600 CKDFW 604
C D+W
Sbjct: 680 CNDYW 684
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 188/390 (48%), Gaps = 2/390 (0%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M + G + ++ + +AC + G H + + + EF++ S+L +Y CG
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
LADA KVFD++ ++N+VSW IIS Y G ++ MF +L KP+ + + L +
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
L K IH + +G G N V T++ ++Y KCG +E A VF++M EK+ V+W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+ ++ GY +AL +F M E ++ + Y VL ACA L L G + +
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVK 240
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
S +GT L+D Y KC + A K F + + + V W+A+++G G + A
Sbjct: 241 LGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKT 300
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F L + N T+ + C+ + G Q + SL M+ +
Sbjct: 301 FESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKS-SLVAYQHGESAMITMYS 359
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
R G+LD A + +S+ +P+A+ W A++AG
Sbjct: 360 RCGRLDYATRVFESID-DPDAVAWTAIIAG 388
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/639 (37%), Positives = 372/639 (58%), Gaps = 37/639 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G + + AI+ Y+++ + P F V KACA D + + H ++ G
Sbjct: 48 LISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFG 107
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D + +L++++ C ++ A VFDD+ K+VVSWT++ Y+N G + I +FR
Sbjct: 108 FNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFR 167
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++ +S ++ +L AC + + +HG++ NV+V+++LV++YA
Sbjct: 168 EMGLNGIRANSLTVSSILPACADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSL 225
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK----------- 229
+++AR VFD M +DIVSW+ M+ Y N + L +F+ M++E +K
Sbjct: 226 GLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAIS 285
Query: 230 ------------------------PEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
P T+V L C +L +L G ++ R+ F+
Sbjct: 286 GCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIE 345
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ + T L+ +YAKCG + + VF M KD V WN ++ SM+G + +F ++
Sbjct: 346 DVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKML 405
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
G++PN TF+G+L GC+H+ L DEG FNSMS S+TP +HY CMVD+L R+G+L
Sbjct: 406 DSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRL 465
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
+EA++ I+ MP+EP A WGALL CR++K +L +QL +EP N+GNYVLLSNI
Sbjct: 466 EEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNIL 525
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ KW +A++IR MM DKG+ K G SWV+V V+ F+ GD S+ + IY LDE+
Sbjct: 526 VTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEID 585
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
K++ G+ P TD VL ++++E+++ L HSE+LA+AFG++ ++ K +R+ KNLR+CG
Sbjct: 586 EKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAVAFGILNSSGKTTVRVFKNLRICG 645
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH AIKLI+KI G +IIVRD+ RFH F +G C+C DFW
Sbjct: 646 DCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCNDFW 684
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 197/406 (48%), Gaps = 42/406 (10%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ ++ G L AL +FD IP+ ++ +WT +ISG+ G ++AI+++ LL R ++PD
Sbjct: 17 LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
F ++ V AC GDL AK IH + G +++ + +L+D++ KC + AR VFD
Sbjct: 77 KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFD 136
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
M KD+VSW+SM Y + G ++ + +F M ++ T+ +L ACA ++L
Sbjct: 137 DMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKL 194
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD------------- 297
G F+ RNE N + + L++MYA + QA VF M +D
Sbjct: 195 GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFL 254
Query: 298 ----------------------QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
Q WNA +SG NG ++A G+ +++ GI+PN T
Sbjct: 255 NKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRIT 314
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
V L GCT+ + G++ + R + + + +V L + G L+ + + +M
Sbjct: 315 IVSALPGCTNLESLRGGKEIHGYVFRHWFIED-VTITTALVLLYAKCGDLELSRHVFNTM 373
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYV 439
P + + W ++ +H K + + N+++ +EP NS ++
Sbjct: 374 P-RKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEP-NSVTFI 417
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/604 (38%), Positives = 350/604 (57%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V N F A+ +++ MR E P +FTFP KA G + H++ +K G
Sbjct: 29 LISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQIHAIALKLG 88
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D+FV S ++Y G +A ++FD++P +NV W A IS + +G +AI+ F
Sbjct: 89 QINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFI 148
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
G +PD + L AC L + +HG V +G +V VA ++D+Y KC
Sbjct: 149 EFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCK 208
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E A VF+ M ++ VSW +M+ N ++A +F ++E ++ Y + V+S
Sbjct: 209 EVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVIS 268
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A + LE G + + + +G+ L+DMY KCG + +VF EM +++ V
Sbjct: 269 AYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVS 328
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++SG + G V +A +F +++ + N T + +L C+ G V G + F SM
Sbjct: 329 WNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIFESMR 387
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P EHY C+ D+LGR+G ++ A+E ++ MP+ P VWGALL CR++ + +L
Sbjct: 388 DRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELG 447
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ + L L+P +SGN+VLLSN+++A+ +W++A +R M D GI+K GCSWV
Sbjct: 448 KIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNK 507
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F D SH + +I + L +L T+++AAG++P T++ L+D+EEEEK + HSEK+
Sbjct: 508 VHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKI 567
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
ALAFGLI P IRI KNLR+CGDCH A K IS I GREIIVRDNNRFH F + CSC
Sbjct: 568 ALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVRDNNRFHRFRDSQCSC 627
Query: 601 KDFW 604
+DFW
Sbjct: 628 RDFW 631
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 171/363 (47%), Gaps = 13/363 (3%)
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
P + VV+WTA+ISG + G A+ F ++ +KP+ F+ A T L K
Sbjct: 19 PTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGK 78
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
IH + G+ + FV S D+Y+K G +A+R+FD+MP +++ W++ I +G
Sbjct: 79 QIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDG 138
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
P +A+D F +R +P+ T L+ACA L+LG + R+ F + +
Sbjct: 139 RPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVAN 198
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
+ID+Y KC + A VF M ++ V W +V+ N + A VF K GI+
Sbjct: 199 GIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIEL 258
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH----YGCMVDLLGRSGQLDE 387
++ +AG+ G +F S+ ++ +E +VD+ G+ G +++
Sbjct: 259 TDYMVSSVI--SAYAGI--SGLEFGRSV-HALAVKACVEGDIFVGSALVDMYGKCGSIED 313
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
++ MP E N + W A+++G D+A + + ++ NYV L + SA
Sbjct: 314 CEQVFHEMP-ERNLVSWNAMISGYAHQGDVDMAMTLFEE---MQSEAVANYVTLICVLSA 369
Query: 448 SHK 450
+
Sbjct: 370 CSR 372
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 115/246 (46%), Gaps = 2/246 (0%)
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+Y+K A+ + P + +V+W+++I G NG+ AL F M+REN+KP +T
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
A +L G + + +++ +G + DMY+K G +A ++F EM
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
++ VWNA +S ++G A F + + G +P+ TF L C A +D GRQ
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ R + ++D+ G+ +++ A + M N++ W ++A C +
Sbjct: 181 LHGLVIRS-GFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRR-NSVSWCTMVAACEQN 238
Query: 415 KKTDLA 420
+ + A
Sbjct: 239 DEKEKA 244
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/598 (39%), Positives = 353/598 (59%), Gaps = 9/598 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ ++ MR G FT V+ AC D L + HS+ V +G D V +LL
Sbjct: 124 ALGLFSGMREMGLDMDXFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLT 181
Query: 74 LYVHCGYLADALKVFDDIPD-KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
Y G L DA +VF + ++ VSW ++I Y +A+ +F+ ++ RGL D F
Sbjct: 182 YYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMF 241
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN-MEKARRVFDQ 191
++ VLTA T L DLS HG + + G +N V + L+DLY+KCG M R+VF++
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301
Query: 192 MPEKDIVSWSSMIQGYASNG-FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+ E D+V W++M+ GY+ N F ++AL+ F MQ +P + V V+SAC++L +
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQ 361
Query: 251 GVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G S +++ SN + + LI MY+KCG + A ++F M + + V N++++G +
Sbjct: 362 GKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYA 421
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G + +F + + I P TF+ +L C H G V+EG +FN M F++ P
Sbjct: 422 QHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEA 481
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
EHY CM+DLLGR+G+L EA LI MP P +I W +LL CR H +LA NQ++
Sbjct: 482 EHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ 541
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
LEP N+ YV+LSN+Y+++ +W + A +R M D+G++K GCSW+EV +H F+ D+
Sbjct: 542 LEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDS 601
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEE---EKQYFLACHSEKLALAFGL 546
SHP+ ++IY L+E++ K+K AG+VP L + EK+ L HSEKLA+AFGL
Sbjct: 602 SHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGL 661
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I+T + + + KNLR+CGDCH AIK IS I GREI VRD +RFHCF EG CSC D+W
Sbjct: 662 ISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 191/416 (45%), Gaps = 37/416 (8%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
F +LK C E D G HSL +K+ + + + LY CG LA A K F DI
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 93 DKNVVSWTAIISGYINE-------------------------------GNLEEAINMFRR 121
D NV S+ AII+ Y E G A+ +F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ GL D F++ V+TAC D+ +H +G V V +L+ Y K G+
Sbjct: 131 MREMGLDMDXFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 182 MEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+RVF M +D VSW+SMI Y + +AL +F M R L + +T+ VL+
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC-KVFREMKDKDQV 299
A L L G+ + + F N +G+ LID+Y+KCG C KVF E+ + D V
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308
Query: 300 VWNAVVSGLSMN-GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+WN +VSG S N +++ A F Q++ G +PN +FV ++ C++ +G+Q +
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + I ++ + + G L +A L M E N + +++AG H
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHNTVSLNSMIAGYAQH 423
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 140/298 (46%), Gaps = 36/298 (12%)
Query: 1 MIRGFVSNDCF-QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+ G+ N+ F + A+E + M+ G+ P + +F V+ AC+ G + HSL +K+
Sbjct: 313 MVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKS 372
Query: 60 GLDCDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+ + V +L+ +Y CG L DA ++FD + + N VS ++I+GY G E++++
Sbjct: 373 DIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHL 432
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F+ +L R + P S + + VL+AC G + +G N F
Sbjct: 433 FQWMLERQIAPTSITFISVLSACAHTGRVE-------------EGWNYF----------- 468
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
NM K + F+ PE + +S MI G EA ++ M P +
Sbjct: 469 --NMMKEK--FNIEPEAE--HYSCMIDLLGRAGKLSEAENLIARMP---FNPGSIGWASL 519
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
L AC + G +EL V A++ + + E SN L +MYA GR + V + M+D+
Sbjct: 520 LGACRTHGNIELAVKAANQVLQLE-PSNAAPYVVLSNMYASAGRWEEVATVRKFMRDR 576
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 152/329 (46%), Gaps = 27/329 (8%)
Query: 95 NVVSWTA-----IISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
N +SWT ++ I E +L ++ + + P ++ + ++ G L+
Sbjct: 2 NQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAW 61
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
A+ +++ NVF +++ YAK A ++FDQ+PE D+VS++++I YA
Sbjct: 62 ARKAFQDISDP----NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYAD 117
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS----LGALELGVWASSFMERNEFLS 265
G AL +F M+ L + +T+ V++AC +G L +S F + ++S
Sbjct: 118 CGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGF---DSYVS 174
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKD-KDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ L+ Y K G + A +VF M +D+V WN+++ + A G+F ++
Sbjct: 175 ---VNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEM 231
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGC-MVDLLGR- 381
+ G+ + T +L T + G QF + + F H G ++DL +
Sbjct: 232 VRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQN---SHVGSGLIDLYSKC 288
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G + + ++ + + EP+ ++W +++G
Sbjct: 289 GGGMSDCRKVFEEI-TEPDLVLWNTMVSG 316
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/504 (43%), Positives = 314/504 (62%)
Query: 80 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
YL KVF+ +P +++VSW +ISG G E+A+ M R + + L+PDSF++ VL
Sbjct: 145 YLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLP 204
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
+ +L K IHGY G +VF+ +SL+D+YAKC ++ + RVF +P+ D +S
Sbjct: 205 IFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGIS 264
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W+S+I G NG E L F M +KP + + ++ ACA L L LG ++
Sbjct: 265 WNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYII 324
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
R+ F N + + L+DMYAKCG + A +F +M+ D V W A++ G +++G+ A
Sbjct: 325 RSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAIS 384
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F ++E G++PN F+ +L C+HAGLVDE ++FNSM++ + + P +EHY + DLL
Sbjct: 385 LFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLL 444
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
GR G+L+EA+E I M +EP VW LLA CR+HK +LAE V +L ++P N G YV
Sbjct: 445 GRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYV 504
Query: 440 LLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYS 499
LLSNIYSA+ +W DA K+R M DKG++K CSW+E+ VH F+ GD SHP ++I
Sbjct: 505 LLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINE 564
Query: 500 KLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAK 559
L L +++ G+V T VL D+EEE+K+Y L HSE+LA+ FG+I+T IR+ K
Sbjct: 565 ALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTK 624
Query: 560 NLRVCGDCHEAIKLISKITGREII 583
NLRVC DCH A K ISKI GREI+
Sbjct: 625 NLRVCVDCHTATKFISKIVGREIV 648
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 173/326 (53%), Gaps = 2/326 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G N + A+ M N P +FT VL A + G H ++ G
Sbjct: 167 VISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNG 226
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D F+ +SL+++Y C + D+ +VF +P + +SW +II+G + G +E + F+
Sbjct: 227 YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQ 286
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L +KP+ S ++ AC L L K +HGY+ + NVF+A++LVD+YAKCG
Sbjct: 287 QMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCG 346
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ AR +FD+M D+VSW++MI GYA +G +A+ +F M+ E +KP Y + VL+
Sbjct: 347 NIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLT 406
Query: 241 ACASLGAL-ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G + E + +S + + + D+ + GR+ +A + +M +
Sbjct: 407 ACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTG 466
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQL 324
VW+ +++ ++ +++A V +L
Sbjct: 467 SVWSTLLAACRVHKNIELAEKVSKKL 492
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 179/406 (44%), Gaps = 42/406 (10%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M G P + FP VLK+C D + G H I++ G+ D + +L+N+Y
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60
Query: 81 LADA-------LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
L + K+ IP+ + G + ++ L R
Sbjct: 61 LEEGGVQRFCDSKMLGGIPEPREI------------GKCSNSHDLPCELDER-------- 100
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN----MEKARRVF 189
+ Q GDL+ I VN K VF D+Y+K + R+VF
Sbjct: 101 ----VAGIDQNGDLNQMSNILYQVNTYKK---VFDEGKTSDVYSKKEKESYYLGSLRKVF 153
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
+ MP++DIVSW+++I G A NG ++AL M M +L+P+ +T+ VL A L
Sbjct: 154 EMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLL 213
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + RN + ++ +G++LIDMYAKC R+ +C+VF + D + WN++++G
Sbjct: 214 KGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCV 273
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPM 368
NG F Q+ I+PN +F ++ C H + G+Q + R F
Sbjct: 274 QNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVF 333
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
I +VD+ + G + A + M + + + W A++ G LH
Sbjct: 334 IA--SALVDMYAKCGNIRTARWIFDKMELY-DMVSWTAMIMGYALH 376
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/628 (37%), Positives = 364/628 (57%), Gaps = 24/628 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI F N+ F A+ F M EG P TF VL AC+ + G H+ ++
Sbjct: 187 MISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTD 246
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ + FV ++L+++Y +CG + VFD + D+ + W A+I+GY + E+A+ +F
Sbjct: 247 DVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLF 306
Query: 120 RRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ GL ++ ++ ++ A + +S + IHGYV + G N ++ +L+D+Y++
Sbjct: 307 IEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSR 366
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN----------- 227
G+++ ++R+FD M ++DIVSW+++I Y G +AL + + MQR
Sbjct: 367 MGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYND 426
Query: 228 -----LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
KP T++ VL CASL AL G ++ RN S +G+ L+DMYAKCG
Sbjct: 427 EKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGC 486
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-----IQPNGNTFV 337
+ A +VF +M ++ + WN ++ M+G K + +F + G ++P TF+
Sbjct: 487 LNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFI 546
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
L C+H+G+VDEG F+ M + P +HY C+VDL+GR+G+++EA+ L+ +MP
Sbjct: 547 ALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPS 606
Query: 398 EPNAI-VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAK 456
+ + W +LL CR++ ++ E L+ L+P + +YVLLSNIYS++ W+ A
Sbjct: 607 GFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMN 666
Query: 457 IRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
+R M G++K GCSW+E VH+FL GD SHP SEK++ L+ L+ +LK G+VP
Sbjct: 667 LRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPD 726
Query: 517 TDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISK 576
T VL DI+EEEK+ L HSEKLA+AFG++ T P IR+AKNLRVC DCH A K ISK
Sbjct: 727 TACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISK 786
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I REII+RD RFH F +G+CSC D+W
Sbjct: 787 IEDREIILRDARRFHHFKDGTCSCGDYW 814
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 170/327 (51%), Gaps = 8/327 (2%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC--DEFVKTSLLNLYVHC 78
M GF P NF FP VLKA A + LG + H+ + K G + +L+N+Y C
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G L DA KVFD I +++ VSW +IIS E AI FR +L G +P SF++V +
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 139 TACTQL---GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
AC+ L L K IHG G R F +L+ +YAK G ++ A+ + ++
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKGHWRT-FSNNALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
D+V+W+SMI ++ N EAL M E +KP+ T VL AC+ L L G
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239
Query: 256 SFMER-NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
++ R ++ + N +G+ L+DMY CG++ VF + D+ +WNA+++G + + +
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHD 299
Query: 315 KVAFGVFGQLE-KCGIQPNGNTFVGLL 340
+ A +F ++E G+ N T ++
Sbjct: 300 EKALMLFIEMEAAAGLYSNATTMSSIV 326
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 199/437 (45%), Gaps = 24/437 (5%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACA--REHD-FQLGVRSHSLIVKAGLDCDEFVKTS 70
AI+ + M EGF P++FT + AC+ R+ D LG + H + G F +
Sbjct: 97 AIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNA 155
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ +Y G L DA + D+++V+W ++IS + EA+ R ++ G+KPD
Sbjct: 156 LMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPD 215
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG-RNVFVATSLVDLYAKCGNMEKARRVF 189
+ VL AC+ L L T K IH Y N FV ++LVD+Y CG +E R VF
Sbjct: 216 GVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVF 275
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACASLGAL 248
D + ++ I W++MI GYA + ++AL +F M+ L TM ++ A +
Sbjct: 276 DSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGI 335
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
++ + +N L LIDMY++ G + + ++F M+D+D V WN +++
Sbjct: 336 SRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSY 395
Query: 309 SMNGYVKVAF----------------GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
+ G A G + ++ +PN T + +L GC + +G
Sbjct: 396 VICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKG 455
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
++ R L + +VD+ + G L+ A + MP+ N I W ++
Sbjct: 456 KEIHAYAIRNL-LASQVTVGSALVDMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMAYG 513
Query: 413 LHKKTDLAEHVLNQLIA 429
+H K + + ++A
Sbjct: 514 MHGKGKESLELFEDMVA 530
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/606 (38%), Positives = 369/606 (60%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI +S+ + A+EFY +M EG LP +TF + KA ++ + G R+H L V G
Sbjct: 72 MISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLG 131
Query: 61 LDC-DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L+ D FV ++L+++Y + DA VF + +K+VV +TA+I GY G EA+ +F
Sbjct: 132 LEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIF 191
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+++RG+KP+ +++ +L C LGDL + IHG V ++G V TSL+ +Y++C
Sbjct: 192 EDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRC 251
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+E + +VF+Q+ + V+W+S + G NG + A+ +F M R ++ P +T+ +L
Sbjct: 252 NMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSIL 311
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+SL LE+G + + N G LI++Y KCG M +A VF + + D V
Sbjct: 312 QACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVV 371
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
N+++ + NG+ A +F +L+ G+ PNG TF+ +L C +AGLV+EG Q F S+
Sbjct: 372 AINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASI 431
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
++ I+H+ CM+DLLGRS +L+EA LI+ + P+ ++W LL C++H + ++
Sbjct: 432 RNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEM 490
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE V+++++ L P + G ++LL+N+Y+++ KWN +++S + D ++K SWV+VD
Sbjct: 491 AEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDR 550
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F+ GD SHP S +I+ L L K+K G+ P T VL D++EE+K L HSEK
Sbjct: 551 EVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEK 610
Query: 540 LALAFGLITTAPK-DVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
LA+A+ L T + IRI KNLRVCGDCH IK +S +TGR+II RD+ RFH F G C
Sbjct: 611 LAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLC 670
Query: 599 SCKDFW 604
SCKD+W
Sbjct: 671 SCKDYW 676
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 191/340 (56%), Gaps = 3/340 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ ++K+G F+ L++ Y+ CG LA+A K+FD++P +++V+W ++IS +I+ G
Sbjct: 24 HTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKS 82
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-KGRNVFVATS 171
+EA+ + +L G+ PD+++ + A +QLG + + HG G + + FVA++
Sbjct: 83 KEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASA 142
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
LVD+YAK M A VF ++ EKD+V ++++I GYA +G EAL +F +M +KP
Sbjct: 143 LVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPN 202
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
YT+ +L C +LG L G + ++ S T+L+ MY++C + + KVF
Sbjct: 203 EYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFN 262
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
++ +QV W + V GL NG +VA +F ++ +C I PN T +L C+ +++
Sbjct: 263 QLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEV 322
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
G Q ++++ L +++L G+ G +D+A +
Sbjct: 323 GEQ-IHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSV 361
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 149/284 (52%), Gaps = 6/284 (2%)
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
L+T + +H V ++G + F+ L+D Y KCG++ +AR++FD++P + IV+W+SMI
Sbjct: 17 LTTLRAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISS 75
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS--SFMERNEFL 264
+ S+G KEA++ + NM E + P+ YT + A + LG + G A + + E L
Sbjct: 76 HISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVL 135
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
V + L+DMYAK +M A VFR + +KD V++ A++ G + +G A +F +
Sbjct: 136 DGFV-ASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDM 194
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
G++PN T +L C + G + G Q + + L ++ ++ + R
Sbjct: 195 VNRGVKPNEYTLACILINCGNLGDLVNG-QLIHGLVVKSGLESVVASQTSLLTMYSRCNM 253
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
++++ ++ + N + W + + G + + ++A + ++I
Sbjct: 254 IEDSIKVFNQLDY-ANQVTWTSFVVGLVQNGREEVAVSIFREMI 296
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/558 (41%), Positives = 341/558 (61%), Gaps = 3/558 (0%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G++ H ++K G + V L+N Y +LK+FD P K+ +W+++IS +
Sbjct: 26 GLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQ 85
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
A+ FRR+L GL PD ++ + L L A +H + +VFV
Sbjct: 86 NDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFV 145
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM--QRE 226
+SLVD YAKCG++ AR+VFD+MP K++VSWS MI GY+ G +EAL++F Q
Sbjct: 146 GSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDY 205
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+++ +T+ VL C++ ELG + F S+ + ++LI +Y+KCG +
Sbjct: 206 DIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGG 265
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
KVF E+K ++ +WNA++ + + + F +F ++E+ G++PN TF+ LL C+HA
Sbjct: 266 YKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHA 325
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
GLV++G F M + + P +HY +VDLLGR+G+L+EA +IK MPM+P VWGA
Sbjct: 326 GLVEKGEHCFGLM-KEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGA 384
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
LL GCR+H T+LA V +++ + +SG VLLSN Y+A+ +W +AA+ R MM D+GI
Sbjct: 385 LLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKMMRDQGI 444
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
+K G SWVE VH F GD SH + +IY KL+EL ++ AG+V T VL +++
Sbjct: 445 KKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLKEVDG 504
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
+EK + HSE+LA+AFGLIT P+ IR+ KNLRVCGDCH AIK ISK TGR IIVRD
Sbjct: 505 DEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRD 564
Query: 587 NNRFHCFIEGSCSCKDFW 604
NNRFH F +G C+C D+W
Sbjct: 565 NNRFHRFEDGKCTCGDYW 582
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 176/336 (52%), Gaps = 3/336 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F ND A+ F+ M G LP + T P K+ A L + H+L +K
Sbjct: 79 VISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTA 138
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV +SL++ Y CG + A KVFD++P KNVVSW+ +I GY G EEA+N+F+
Sbjct: 139 HHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFK 198
Query: 121 RLLHR--GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
R L + ++ + F++ VL C+ K +HG + + FVA+SL+ LY+K
Sbjct: 199 RALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSK 258
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG +E +VF+++ +++ W++M+ A + ++F M+R +KP + T + +
Sbjct: 259 CGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCL 318
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKD 297
L AC+ G +E G M+ + TL+D+ + G++ +A V +EM
Sbjct: 319 LYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPT 378
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+ VW A+++G ++G ++A V ++ + G +G
Sbjct: 379 ESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSG 414
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 149/326 (45%), Gaps = 13/326 (3%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
D I +VL T L +HG V + G V L++ Y+K + ++F
Sbjct: 6 DCRDICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLF 65
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D P K +WSS+I +A N P AL F M R L P+ +T+ + A+L +L
Sbjct: 66 DSFPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLP 125
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
L + + + + +G++L+D YAKCG + A KVF EM K+ V W+ ++ G S
Sbjct: 126 LALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYS 185
Query: 310 MNGYVKVAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN-SMSRVFSLT 366
G + A +F + + I+ N T +L C+ + L + G+Q F +
Sbjct: 186 QMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSS 245
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
+ ++ L + G ++ +++ + + + N +W A+L C H T + +
Sbjct: 246 CFVA--SSLISLYSKCGVVEGGYKVFEEVKVR-NLGMWNAMLIACAQHAHTGRTFELFEE 302
Query: 427 L--IALEPWNSGNYV-LLSNIYSASH 449
+ + ++P N++ L +Y+ SH
Sbjct: 303 MERVGVKP----NFITFLCLLYACSH 324
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/440 (47%), Positives = 298/440 (67%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+V T+++ + G+++ AR +FD MP++D V+W++M+ GY G +EAL +F MQ
Sbjct: 189 DVVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQ 248
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
+ + T+V VL+ACA +GALE G+W S++ + LGT L+DMY+KCG +
Sbjct: 249 KAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVT 308
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
+ +VF M++++ W + +SGL+MNG + +F ++E G++PNG TFV +L GC+
Sbjct: 309 MSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCS 368
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
AGLV+EGR F+SM + P +EHYGCMVDL GR+G+LD+A + I SMP+EP+ VW
Sbjct: 369 VAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVW 428
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
GALL R+H DL +H +++L +E N +VLLSNIY+ SH W +K+R+MM K
Sbjct: 429 GALLNASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSK 488
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
G++K+ GCS +EVDG VHEF VG SHP + I + L E++ +L+ G+ T VLFDI
Sbjct: 489 GVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAANTKEVLFDI 548
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
EEEEK+ ++ HSEKLALAFGLIT VIRI KNLRVC DCH+ KLISK+ REI++
Sbjct: 549 EEEEKEGAISLHSEKLALAFGLITLPEDTVIRIVKNLRVCKDCHDYTKLISKVFDREIVM 608
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD NRFH F G+CSC+D+W
Sbjct: 609 RDRNRFHHFKHGACSCRDYW 628
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 135/251 (53%), Gaps = 4/251 (1%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T++L G + A ++FD +P ++ V+W A+++GY+ G EA+ +F + G+
Sbjct: 194 TAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVA 253
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
++V VLTAC Q+G L W+H YV G +V + T+LVD+Y+KCG + + V
Sbjct: 254 VSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEV 313
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F+ M E++I +W+S + G A NG +E L++F M+ ++P T V VL C+ G +
Sbjct: 314 FETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLV 373
Query: 249 ELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
E G M +++ P L ++D+Y + GR+ A M + + VW A++
Sbjct: 374 EEGRACFDSM-KDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALL 432
Query: 306 SGLSMNGYVKV 316
+ ++ V +
Sbjct: 433 NASRIHNNVDL 443
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 97/194 (50%), Gaps = 1/194 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+V + A+ ++ M+ G + T VL ACA+ + G+ HS + G
Sbjct: 227 MLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRG 286
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + T+L+++Y CG + +++VF+ + ++N+ +WT+ +SG G EE + +F+
Sbjct: 287 MRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFK 346
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS-LVDLYAKC 179
R+ G++P+ + V VL C+ G + + + + K +VDLY +
Sbjct: 347 RMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRA 406
Query: 180 GNMEKARRVFDQMP 193
G ++ A + MP
Sbjct: 407 GRLDDAVDFINSMP 420
>gi|297745917|emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/607 (39%), Positives = 351/607 (57%), Gaps = 63/607 (10%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR + S+ + Q + F + P FTFPF++KA + + G H +++K
Sbjct: 106 LIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKV 165
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L D F+ SL++ Y CG L +VF +IP ++VVSW ++I+ ++ G EEA+ +F
Sbjct: 166 LLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELF 225
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ + + S +++ + T C G + AK + + E +++ T+++ YAK
Sbjct: 226 QEMETQNSLTLSNAMLDMYTKC---GSVEDAKRLFDKMPE----KDIVSWTTMLVGYAKI 278
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMVGV 238
G + A+ +FD MP +DI +W+++I Y G PKEAL++F+ +Q + KP+ T+
Sbjct: 279 GEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTL--- 335
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+ N L T+LIDMY KCG + +A VF ++ KD
Sbjct: 336 ---------------------KQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDV 374
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
VW+A+++GL+M+G+ K A +F ++++ ++PN TF +LC C+H GLV+EGR FFN
Sbjct: 375 FVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQ 434
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M V+ MPM P A VWGALL C +H+
Sbjct: 435 MELVYG-----------------------------KMPMAPAASVWGALLGACTIHENVV 465
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
LAE +QLI LEP N G YVLLSNIY+ + KW+ + +R +M D G++K GCS +EVD
Sbjct: 466 LAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVD 525
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEE-KQYFLACHS 537
G+VHEFLVGDNSHP ++KIY+KLDE+ +L+ G+VP H+L +EEE+ K+ L HS
Sbjct: 526 GIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHS 585
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EKLA+AFGLI+T IRI KNLRVCGDCH KL+SK+ REI++RD RFH F EG
Sbjct: 586 EKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGH 645
Query: 598 CSCKDFW 604
CSC D+W
Sbjct: 646 CSCMDYW 652
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/520 (42%), Positives = 329/520 (63%), Gaps = 4/520 (0%)
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLG 145
+FD IPD + ++I G+ A+ ++RR+L G +P+SF++ L AC +
Sbjct: 131 LFDQIPDPTAFCYNSLIRALPAAGS-APALAVYRRMLRAGSPRPNSFTLAFALKACAAVP 189
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ +H G + +V T L++LYAKC + AR VFD M +K++V+WS+M+
Sbjct: 190 APGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMV 249
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GY+ G EAL +F MQ ++P+ TMV V+SACA GAL+LG W ++++R
Sbjct: 250 SGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGIT 309
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ L T LIDMYAKCG + +A VF M +KD W+A++ G +++G V+ A G+F ++
Sbjct: 310 VDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRM 369
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ ++PN TF+G+L C H+GLV++GR++++ M + P +E+YGCMVDLL RSG
Sbjct: 370 LELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQN-LGIKPSMENYGCMVDLLCRSGL 428
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
LD+A+ + MP+ PN+++W LL C+ + D+AE +L+ LEP N NYVLLSN+
Sbjct: 429 LDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNL 488
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+++ +W+ + +R M K + I G S +E++G +HEF+V D+SHP +I L E+
Sbjct: 489 YASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREM 548
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
A +++ AG P T VL D+ EEEK+ L HSE+LA+A+GL+ T VIR+ KNLR C
Sbjct: 549 ADRVRRAGHKPWTAAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHVIRVVKNLRFC 608
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCHE K+ISK REI+VRD RFH F+ GSCSCKDFW
Sbjct: 609 LDCHEVAKIISKAYNREIVVRDRVRFHKFMGGSCSCKDFW 648
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 171/307 (55%), Gaps = 3/307 (0%)
Query: 14 AIEFYNSMRNEGF-LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+ Y M G P +FT F LKACA G + H+ ++ GL +V+T LL
Sbjct: 158 ALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLL 217
Query: 73 NLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
NLY C +A A VFD + DKN+V+W+A++SGY G + EA+ +FR + G++PD
Sbjct: 218 NLYAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDE 277
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++V V++AC + G L KW+H Y++ G ++ ++T+L+D+YAKCG +E+AR VFD
Sbjct: 278 VTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDA 337
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M EKD +WS+MI G+A +G ++AL +F M ++P T +GVLSACA G +E G
Sbjct: 338 MVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDG 397
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSM 310
S M+ + ++D+ + G + A M + V+W ++
Sbjct: 398 RRYWSIMQNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKS 457
Query: 311 NGYVKVA 317
+ + +A
Sbjct: 458 SNRIDIA 464
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 6/248 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ A+ + M+ G P T V+ ACA+ LG H+ I + G
Sbjct: 248 MVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKG 307
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D + T+L+++Y CG + A VFD + +K+ +W+A+I G+ G +E+A+ +F
Sbjct: 308 ITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFS 367
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+L ++P++ + + VL+AC G + + + G ++ +VDL + G
Sbjct: 368 RMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRSG 427
Query: 181 NMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQRENLKPEYYTMV 236
++ A MP + V W +++ S+ + A ++ N PE Y ++
Sbjct: 428 LLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHN--PENYVLL 485
Query: 237 GVLSACAS 244
L A S
Sbjct: 486 SNLYASNS 493
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/598 (39%), Positives = 348/598 (58%), Gaps = 1/598 (0%)
Query: 8 NDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFV 67
N CF ++ + M EG L +F F +KAC FQ HSL +K L+ D +V
Sbjct: 91 NKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYV 150
Query: 68 KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL 127
+L+N+Y G L +A KVF+++P KN V W +I G++N +F R+ G
Sbjct: 151 APALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGF 210
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
+ D F + ++ AC + K HG + + N F+ TSLVD+Y KCG ++ A
Sbjct: 211 ELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFAL 270
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
++F+++ +D+V WS++I G+A NG E++ MF M +++ P T ++ AC+SLG
Sbjct: 271 KLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLG 330
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
+L+ G +M RN + T+ IDMYAKCG + A +VF ++ +K+ W+ +++
Sbjct: 331 SLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMIN 390
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G M+G A +F ++ PN TFV +L C+H+G ++EG F SMSR + +T
Sbjct: 391 GFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGIT 450
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
P+ EHY CMVDLLGR+G++DEA I +MP EP A WGALL CR+H++ +LAE V +
Sbjct: 451 PVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKK 510
Query: 427 LIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLV 486
L+ LE SG YV+LSNIY+ W K R M +KGI KI G + +E++ ++ F
Sbjct: 511 LLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSS 570
Query: 487 GDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGL 546
D + +I S + L +++ G+VP VL D+++E KQ L HSEKLA+ FGL
Sbjct: 571 EDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGL 630
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ + IRI KN+RVCGDCH A K IS IT R+II+RD RFH +G CSC D+W
Sbjct: 631 LNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 179/321 (55%), Gaps = 5/321 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI+G ++ E ++ MR GF F +++AC + + G H L +K
Sbjct: 185 MIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKN 244
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+D + F++TSL+++Y+ CG+L ALK+F++I ++VV W+AII+G+ G E+I+MF
Sbjct: 245 FIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMF 304
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R++L + P+S + ++ AC+ LG L + +HGY+ G +V TS +D+YAKC
Sbjct: 305 RQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKC 364
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + A RVF Q+PEK++ SWS+MI G+ +G EAL++FY M+ N P T V VL
Sbjct: 365 GCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVL 424
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREM-KDK 296
SAC+ G +E G W+ ++ PV ++D+ + G++ +A M +
Sbjct: 425 SACSHSGRIEEG-WSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEP 483
Query: 297 DQVVWNAVVSGLSMNGYVKVA 317
W A++ ++ ++A
Sbjct: 484 GASAWGALLGACRIHRRAELA 504
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 202/398 (50%), Gaps = 5/398 (1%)
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
Y+ G L A K F+ I +N+ SW I++ + + + +F+R+L G DSF++
Sbjct: 57 YIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNL 116
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
V + AC L AK H + + +VA +L+++Y + G++E+A +VF+++P
Sbjct: 117 VFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPL 176
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
K+ V W MI+G+ + ++F M+R + + + + G++ AC ++ A + G
Sbjct: 177 KNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTF 236
Query: 255 SSFMERNEFL-SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ F+ SN L T+L+DMY KCG + A K+F E+ +D VVW+A+++G + NG
Sbjct: 237 HGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGR 296
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
+ +F Q+ + PN TF ++ C+ G + +GR M R + +++Y
Sbjct: 297 ALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRN-GVELDVKNYT 355
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
+D+ + G + A+ + +P E N W ++ G +H A ++ ++ ++
Sbjct: 356 SFIDMYAKCGCIVTAYRVFCQIP-EKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQL 414
Query: 434 -NSGNYVLLSNIYSASHKWNDA-AKIRSMMGDKGIQKI 469
NS +V + + S S + + + +SM D GI +
Sbjct: 415 PNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPV 452
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 127/269 (47%), Gaps = 7/269 (2%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
R++ + Y + G++ A + F+ + +++ SW++++ ++ N + L +F M
Sbjct: 45 RSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRM 104
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
+E + + +V + AC L + S + +P + L+++Y + G +
Sbjct: 105 LKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSL 164
Query: 284 AQACKVFREMKDKDQVVWNAVVSG-LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL-- 340
+A KVF E+ K+ V+W ++ G L+ + V F +F ++ + G + + GL+
Sbjct: 165 EEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGV-FELFSRMRRSGFELDPFVVEGLIQA 223
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
CG +AG EG+ F + + +VD+ + G LD A +L + + +
Sbjct: 224 CGNVYAG--KEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYR-D 280
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+VW A++AG + + + + Q++A
Sbjct: 281 VVVWSAIIAGFARNGRALESISMFRQMLA 309
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/542 (42%), Positives = 333/542 (61%), Gaps = 9/542 (1%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D T+++ Y G L +A +FD++P +NVV+WTA++SGY G ++ A +F +
Sbjct: 178 DVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMP 237
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
R + S +L T G + A + +A + V V ++ + G ++
Sbjct: 238 ER----NEVSWTAMLLGYTHSGRMREASSLF----DAMPVKPVVVCNEMIMGFGLNGEVD 289
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
KARRVF M E+D +WS+MI+ Y G+ EAL +F MQRE L + +++ VLS C
Sbjct: 290 KARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCV 349
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
SL +L+ G + + R+EF + + + LI MY KCG + +A +VF KD V+WN+
Sbjct: 350 SLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNS 409
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++G S +G + A VF + G+ P+ TF+G+L C+++G V EG + F +M +
Sbjct: 410 MITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKY 469
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ P IEHY C+VDLLGR+ Q++EA +L++ MPMEP+AIVWGALL CR H K DLAE
Sbjct: 470 QVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVA 529
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
+ +L LEP N+G YVLLSN+Y+ +W D +R + + + K+ GCSW+EV+ VH
Sbjct: 530 VEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHM 589
Query: 484 FLVGDNS-HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
F GD+ HP I L++L L+ AG+ P VL D++EEEK + L HSEKLA+
Sbjct: 590 FTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAV 649
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
A+GL+ IR+ KNLRVCGDCH AIKLI+K+TGREII+RD NRFH F +G CSCKD
Sbjct: 650 AYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKD 709
Query: 603 FW 604
+W
Sbjct: 710 YW 711
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 177/361 (49%), Gaps = 33/361 (9%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++ ++ G L++A +VFD +PD+NVVSWT+++ GY+ G++ EA +F + H+ +
Sbjct: 92 LISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNV--- 148
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S +L Q G + A+ + + E ++V T+++ Y + G +++AR +FD
Sbjct: 149 -VSWTVMLGGLLQEGRVDDARKLFDMMPE----KDVVAVTNMIGGYCEEGRLDEARALFD 203
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+MP++++V+W++M+ GYA NG A +F M N S A+ L
Sbjct: 204 EMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNE--------------VSWTAMLL 249
Query: 251 GVWASSFMERNEFLSNP------VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
G S M L + V+ +I + G + +A +VF+ MK++D W+A+
Sbjct: 250 GYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAM 309
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
+ GY A G+F ++++ G+ N + + +L C +D G+Q + R
Sbjct: 310 IKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRS-E 368
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ ++ + + G L A ++ P++ + ++W +++ G H L E L
Sbjct: 369 FDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLK-DVVMWNSMITGYSQH---GLGEEAL 424
Query: 425 N 425
N
Sbjct: 425 N 425
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 155/338 (45%), Gaps = 63/338 (18%)
Query: 75 YVHCGYLADALKVFDD--IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
Y G L A KVFD+ +P + V SW A+++ Y EA+ +F ++ R
Sbjct: 32 YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR------- 84
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+T W L+ + K G + +ARRVFD M
Sbjct: 85 ---------------NTVSW-----------------NGLISGHIKNGMLSEARRVFDTM 112
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
P++++VSW+SM++GY NG EA +F++M +N+ + G+L A +L
Sbjct: 113 PDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKL-- 170
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
M + ++ T +I Y + GR+ +A +F EM ++ V W A+VSG + NG
Sbjct: 171 --FDMMPEKDVVAV----TNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNG 224
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
V VA +F + + N ++ +L G TH+G + E F++M + P++
Sbjct: 225 KVDVARKLFEVMP----ERNEVSWTAMLLGYTHSGRMREASSLFDAM----PVKPVVV-- 274
Query: 373 GC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
C M+ G +G++D+A + K M N W A++
Sbjct: 275 -CNEMIMGFGLNGEVDKARRVFKGMKERDNG-TWSAMI 310
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNF-TFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI+ + A+ + M+ EG L NF + VL C G + H+ +V++
Sbjct: 309 MIKVYERKGYELEALGLFRRMQREG-LALNFPSLISVLSVCVSLASLDHGKQVHAQLVRS 367
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D D +V + L+ +YV CG L A +VF+ P K+VV W ++I+GY G EEA+N+F
Sbjct: 368 EFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVF 427
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH-----GYVNEAGKGRNVFVATSLVD 174
+ G+ PD + + VL+AC+ G + + Y E G + LVD
Sbjct: 428 HDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPG----IEHYACLVD 483
Query: 175 LYAKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
L + + +A ++ ++MP E D + W +++
Sbjct: 484 LLGRADQVNEAMKLVEKMPMEPDAIVWGALL 514
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 24/239 (10%)
Query: 176 YAKCGNMEKARRVFDQ--MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
YA+ G ++ AR+VFD+ +P + + SW++M+ Y P+EAL +F M + N
Sbjct: 32 YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNT----V 87
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
+ G++S G L M N V T+++ Y + G +A+A ++F M
Sbjct: 88 SWNGLISGHIKNGMLSEARRVFDTMPDR----NVVSWTSMVRGYVRNGDVAEAERLFWHM 143
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
K+ V W ++ GL G V A +F + + + N ++ G G +DE R
Sbjct: 144 PHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTN----MIGGYCEEGRLDEAR 199
Query: 354 QFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F+ M + V + T M+ Y R+G++D A +L + MP E N + W A+L G
Sbjct: 200 ALFDEMPKRNVVTWTAMVSGY-------ARNGKVDVARKLFEVMP-ERNEVSWTAMLLG 250
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/540 (41%), Positives = 333/540 (61%), Gaps = 6/540 (1%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN-EGNLEEAINMFRRLLH 124
FV SL+++Y G L DAL++FD +P++NVV+WT +++ N +G EEA+ +
Sbjct: 116 FVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWR 175
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G+ P++++ VL AC G L+ +H + G +VFV +SL+D Y K G+++
Sbjct: 176 DGVAPNAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDVFVRSSLIDAYMKLGDLDG 232
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
RRVFD+M +D+V W+S+I G+A +G A+++F M+ T+ VL AC
Sbjct: 233 GRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTG 292
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
+ LE G + + + E + +L L+DMY KCG + A +F M +D + W+ +
Sbjct: 293 MVMLEAGRQVHAHVLKYE--RDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTM 350
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
+SGL+ NG A VF ++ G+ PN T VG+L C+HAGLV++G +F SM ++F
Sbjct: 351 ISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFG 410
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ P EH+ CMVDLLGR+G+LDEA E I+ M +EP+A++W LL CR+HK +LA +
Sbjct: 411 IQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAA 470
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+++ LEP + G VLLSN Y+ +W DA K M D+G++K G SW+E++ VH F
Sbjct: 471 REILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVF 530
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
+ GD SHP S+ I +L+ L ++ A G+VP T+ VL D+ E+K+ L HSEK+A+AF
Sbjct: 531 IAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAF 590
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
G + IRI KNLR+CGDCH KL+SK GR II+RD RFH F +G+CSC D+W
Sbjct: 591 GTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 168/305 (55%), Gaps = 13/305 (4%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS--HSLIVKAGLDCDEFVKT 69
+ A+ F +M +G P +TF VL AC GV + H+ VK GLD D FV++
Sbjct: 164 EEALRFLVAMWRDGVAPNAYTFSSVLGACGTP-----GVLAALHASTVKVGLDSDVFVRS 218
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
SL++ Y+ G L +VFD++ +++V W +II+G+ G+ AI +F R+ G
Sbjct: 219 SLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSA 278
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
+ ++ VL ACT + L + +H +V + R++ + +L+D+Y KCG++E A +F
Sbjct: 279 NQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALF 336
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
+MP++D++SWS+MI G A NG EAL +F M+ E + P TMVGVL AC+ G +E
Sbjct: 337 HRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVE 396
Query: 250 LGVWASSFMERNEFLSNPVL--GTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVS 306
G W + F P ++D+ + G++ +A + R+M + D V+W ++
Sbjct: 397 DG-WYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLG 455
Query: 307 GLSMN 311
M+
Sbjct: 456 ACRMH 460
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 168/331 (50%), Gaps = 17/331 (5%)
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVN--------EAGKGRNVFVATSLVDLYAKC 179
+ D S+ R++ C + G + IH +V G G +FV+ SLV +YAK
Sbjct: 69 RADPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKF 128
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYA-SNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G ++ A R+FD+MPE+++V+W++++ A ++G +EAL M R+ + P YT V
Sbjct: 129 GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSV 188
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L AC + G L + AS+ + S+ + ++LID Y K G + +VF EM +D
Sbjct: 189 LGACGTPGVLA-ALHASTV--KVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDL 245
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
VVWN++++G + +G A +F +++ G N T +L CT +++ GRQ
Sbjct: 246 VVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVH-- 303
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ V + + ++D+ + G L++A L MP + + I W +++G + K+
Sbjct: 304 -AHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMP-QRDVISWSTMISGLAQNGKSA 361
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
A V + L+ E ++ +++ SH
Sbjct: 362 EALRVFD-LMKSEGVAPNRITMVGVLFACSH 391
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF + AIE + M++ GF T VL+AC + G + H+ ++K
Sbjct: 251 IIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK-- 308
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D + +LL++Y CG L DA +F +P ++V+SW+ +ISG G EA+ +F
Sbjct: 309 YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFD 368
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS----LVDLY 176
+ G+ P+ ++V VL AC+ G L W Y K + +VDL
Sbjct: 369 LMKSEGVAPNRITMVGVLFACSHAG-LVEDGWY--YFRSMKKLFGIQPEREHHNCMVDLL 425
Query: 177 AKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ G +++A M E D V W +++
Sbjct: 426 GRAGKLDEAVEFIRDMNLEPDAVIWRTLL 454
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/560 (40%), Positives = 336/560 (60%), Gaps = 42/560 (7%)
Query: 48 LGVRSHSLIVKAGLDC-DEFVKTSLLNLYVH--CGYLADALKVFDDIPDKNVVSWTAIIS 104
LG H+ +++G D FV+T+L+ +Y G +A A FD+ P ++V +++
Sbjct: 65 LGASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLA 124
Query: 105 GYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR 164
Y+ G + EA +F D S GR
Sbjct: 125 AYVARGEVAEARKVF----------DGMS-----------------------------GR 145
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
++ +++ YA G++ AR +FD ++D SWSSMI YA KEAL+++ M+
Sbjct: 146 DLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMR 205
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
+ P+ +MV VLSAC+++GAL +G F+E N + LGT L+DMYAKCG +
Sbjct: 206 VAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIE 265
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
+ KVF M KD + W++++ GL+ +G A +F ++ G+QPN TF+G+L CT
Sbjct: 266 NSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACT 325
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
H GLV++G+++F+SMS V + P +EHYGCMVDLLGR+G ++EA ELI+SM +P+ I+W
Sbjct: 326 HVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIW 385
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
LL CR+HK ++AE + +L L+P G+YVLLSNIY+ ++ W A++R + +
Sbjct: 386 RTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRE 445
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
IQ++ G S +E + VHEF+ GD SHP E+IY L+E+ +L+ AG+ P T VL DI
Sbjct: 446 NIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQAGYRPMTSLVLQDI 505
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
+E+ K+ LA HSEKLA+AFGL+ T + +RI KNLR C DCH AIKLIS R++IV
Sbjct: 506 DEQSKKRALAEHSEKLAIAFGLLVTPARSTLRITKNLRACEDCHSAIKLISLAYDRKLIV 565
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD NRFH F EG CSCKD+W
Sbjct: 566 RDRNRFHHFSEGQCSCKDYW 585
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + C + A+E + MR G P + VL AC+ +G H +
Sbjct: 184 MISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNR 243
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D + T+L+++Y CG + ++LKVF +P K+V++W+++I G N G +A+++F
Sbjct: 244 VEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFS 303
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW-------IHGYVNEAGKGRNVFVATSLV 173
++ +GL+P+ + + VL ACT +G ++ K +HG V +V
Sbjct: 304 EMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEH------YGCMV 357
Query: 174 DLYAKCGNMEKARRVFDQMPEK-DIVSWSSMI 204
DL + G++E+A + M K D + W +++
Sbjct: 358 DLLGRAGHVEEAMELIRSMTFKPDPIIWRTLL 389
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/520 (42%), Positives = 329/520 (63%), Gaps = 4/520 (0%)
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLG 145
+FD IPD + ++I G+ A+ ++RR+L G +P+SF++ L AC +
Sbjct: 82 LFDQIPDPTAFCYNSLIRALPAAGS-APALAVYRRMLRAGSPRPNSFTLAFALKACAAVP 140
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ +H G + +V T L++LYAKC + AR VFD M +K++V+WS+M+
Sbjct: 141 APGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMV 200
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GY+ G EAL +F MQ ++P+ TMV V+SACA GAL+LG W ++++R
Sbjct: 201 SGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGIT 260
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ L T LIDMYAKCG + +A VF M +KD W+A++ G +++G V+ A G+F ++
Sbjct: 261 VDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRM 320
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ ++PN TF+G+L C H+GLV++GR++++ M + P +E+YGCMVDLL RSG
Sbjct: 321 LELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQN-LGIKPSMENYGCMVDLLCRSGL 379
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
LD+A+ + MP+ PN+++W LL C+ + D+AE +L+ LEP N NYVLLSN+
Sbjct: 380 LDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNL 439
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+++ +W+ + +R M K + I G S +E++G +HEF+V D+SHP +I L E+
Sbjct: 440 YASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREM 499
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
A +++ AG P T VL D+ EEEK+ L HSE+LA+A+GL+ T VIR+ KNLR C
Sbjct: 500 ADRVRRAGHKPWTAAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHVIRVVKNLRFC 559
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCHE K+ISK REI+VRD RFH F+ GSCSCKDFW
Sbjct: 560 LDCHEVAKIISKAYNREIVVRDRVRFHKFMGGSCSCKDFW 599
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 171/307 (55%), Gaps = 3/307 (0%)
Query: 14 AIEFYNSMRNEGF-LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+ Y M G P +FT F LKACA G + H+ ++ GL +V+T LL
Sbjct: 109 ALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLL 168
Query: 73 NLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
NLY C +A A VFD + DKN+V+W+A++SGY G + EA+ +FR + G++PD
Sbjct: 169 NLYAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDE 228
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++V V++AC + G L KW+H Y++ G ++ ++T+L+D+YAKCG +E+AR VFD
Sbjct: 229 VTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDA 288
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M EKD +WS+MI G+A +G ++AL +F M ++P T +GVLSACA G +E G
Sbjct: 289 MVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDG 348
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSM 310
S M+ + ++D+ + G + A M + V+W ++
Sbjct: 349 RRYWSIMQNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKS 408
Query: 311 NGYVKVA 317
+ + +A
Sbjct: 409 SNRIDIA 415
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 6/248 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ A+ + M+ G P T V+ ACA+ LG H+ I + G
Sbjct: 199 MVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKG 258
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D + T+L+++Y CG + A VFD + +K+ +W+A+I G+ G +E+A+ +F
Sbjct: 259 ITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFS 318
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+L ++P++ + + VL+AC G + + + G ++ +VDL + G
Sbjct: 319 RMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRSG 378
Query: 181 NMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQRENLKPEYYTMV 236
++ A MP + V W +++ S+ + A ++ N PE Y ++
Sbjct: 379 LLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHN--PENYVLL 436
Query: 237 GVLSACAS 244
L A S
Sbjct: 437 SNLYASNS 444
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/608 (39%), Positives = 364/608 (59%), Gaps = 5/608 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G N+ F+ A+ +++MR G +P+ F+ L +CA LG + H +K G
Sbjct: 427 IISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCG 486
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY-INEGNLEEAINMF 119
LD D V +LL LY + + KVF +P+ + VSW + I +E ++ +AI F
Sbjct: 487 LDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYF 546
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G KP+ + + +L+A + L L + IH + + + + +L+ Y KC
Sbjct: 547 LEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKC 606
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
ME +F +M E+ D VSW++MI GY NG +A+ + + M ++ + + +T+ V
Sbjct: 607 EQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATV 666
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
LSACAS+ LE G+ + R + V+G+ L+DMYAKCG++ A + F M ++
Sbjct: 667 LSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNI 726
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WN+++SG + +G+ A +F Q+++ G P+ TFVG+L C+H GLVDEG + F S
Sbjct: 727 YSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKS 786
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLHKK- 416
M V+ L P IEH+ CMVDLLGR+G + + E IK+MPM PNA++W +L A CR + +
Sbjct: 787 MGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRN 846
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
T+L LI LEP N+ NYVLLSN+++A KW D + R M + ++K GCSWV
Sbjct: 847 TELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVT 906
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
+ VH F+ GD +HP EKIY KL E+ K++ G+VP T + L+D+E E K+ L+ H
Sbjct: 907 MKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYH 966
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEKLA+AF ++T + IRI KNLRVCGDCH A K IS I R+II+RD+NRFH F G
Sbjct: 967 SEKLAIAF-VLTRQSELPIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGG 1025
Query: 597 SCSCKDFW 604
CSC+D+W
Sbjct: 1026 ICSCQDYW 1033
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 204/398 (51%), Gaps = 19/398 (4%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADAL 85
F P N + +C E QL H I K GL D F +L+N++V G L A
Sbjct: 39 FPPLNLDYNRYRDSCTVEDAHQL----HLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQ 94
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
K+FD++P KN+VSW+ ++SGY G +EA +FR ++ GL P+ ++I L AC +LG
Sbjct: 95 KLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELG 154
Query: 146 D--LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC-GNMEKARRVFDQMPEKDIVSWSS 202
L IHG ++++ ++ ++ L+ +Y+ C +++ ARRVF+++ K SW+S
Sbjct: 155 PNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNS 214
Query: 203 MIQGYASNGFPKEALDMFYNMQRE----NLKPEYYTMVGVLSACASL--GALELGVWASS 256
+I Y G A +F +MQRE N +P YT +++ SL L L +
Sbjct: 215 IISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLA 274
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
+E++ F+ + +G+ L+ +A+ G + A +F +M D++ V N ++ GL+ +
Sbjct: 275 RIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEE 334
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY---- 372
A +F +++ ++ N +++ LL T + EG++ + +++ +
Sbjct: 335 AAKIFKEMKDL-VEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIG 393
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+V+L + +D A + + MP + + W ++++G
Sbjct: 394 NALVNLYAKCNAIDNARSIFQLMP-SKDTVSWNSIISG 430
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 188/382 (49%), Gaps = 5/382 (1%)
Query: 49 GVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI 107
G H+ +++ L D + +L+NLY C + +A +F +P K+ VSW +IISG
Sbjct: 373 GQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLD 432
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
+ EEA+ F + G+ P FS++ L++C LG + + IHG + G +V
Sbjct: 433 HNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVS 492
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA-SNGFPKEALDMFYNMQRE 226
V+ +L+ LYA+ ME+ ++VF MPE D VSW+S I A S +A+ F M +
Sbjct: 493 VSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQA 552
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
KP T + +LSA +SL LELG + + ++ + + TL+ Y KC +M
Sbjct: 553 GWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDC 612
Query: 287 CKVFREMKD-KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
+F M + +D+V WNA++SG NG + A G+ + + G + + T +L C
Sbjct: 613 EIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACAS 672
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
++ G + R L + +VD+ + G++D A + MP+ N W
Sbjct: 673 VATLERGMEVHACAIRA-CLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWN 730
Query: 406 ALLAGCRLHKKTDLAEHVLNQL 427
++++G H A + Q+
Sbjct: 731 SMISGYARHGHGGKALKLFTQM 752
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 180/369 (48%), Gaps = 15/369 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR--EHDFQLGVRSHSLIVK 58
++ G+ N A + + + G LP ++ L+AC + +LG+ H LI K
Sbjct: 111 LVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK 170
Query: 59 AGLDCDEFVKTSLLNLYVHC-GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
+ D + L+++Y HC + DA +VF++I K SW +IIS Y G+ A
Sbjct: 171 SPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFK 230
Query: 118 MF----RRLLHRGLKPDSFSIVRVLTACTQLGD--LSTAKWIHGYVNEAGKGRNVFVATS 171
+F R +P+ ++ ++T L D L+ + + + ++ ++++V ++
Sbjct: 231 LFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSA 290
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
LV +A+ G ++ A+ +F+QM +++ V+ + ++ G A +EA +F M ++ ++
Sbjct: 291 LVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEIN 349
Query: 232 YYTMVGVLSACASLGALE----LGVWASSFMERNEFLSNPVL-GTTLIDMYAKCGRMAQA 286
+ +LSA L+ G +++ RN + +L G L+++YAKC + A
Sbjct: 350 ASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNA 409
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
+F+ M KD V WN+++SGL N + A F + + G+ P+ + + L C
Sbjct: 410 RSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASL 469
Query: 347 GLVDEGRQF 355
G + G+Q
Sbjct: 470 GWIMLGQQI 478
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/604 (39%), Positives = 347/604 (57%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + ND ++A+ ++ MR GF P F LKA LG H VK
Sbjct: 220 MVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTL 279
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V +LL++Y CG + DA +F+ IP +V+ W+ +IS Y E+A MF
Sbjct: 280 YDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFL 339
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R++ + P+ FS+ VL AC + L + IH + G +FV +L+D+YAKC
Sbjct: 340 RMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCR 399
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
NME + +F + + + VSW+++I GY +GF ++AL +F+ M+ ++ T VL
Sbjct: 400 NMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLR 459
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+ +++ V S +E++ F ++ ++ +LID YAKCG + A KVF + + D V
Sbjct: 460 ACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVS 519
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN+++S +++G A +F ++ K I+ N TFV LL C GLV++G FNSM
Sbjct: 520 WNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMM 579
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P +EHY C+V LLGR+G+L +A + I +P P+ +VW ALL+ C +HK L
Sbjct: 580 MDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALG 639
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ +++ +EP + YVLLSN+Y+A+ ++ A R M + G++K G SWVE+ G
Sbjct: 640 RYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGE 699
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F VG HP I + L+ L K G+VP + VL D++EEEK L HSE+L
Sbjct: 700 VHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERL 759
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
ALA+GL T P IRI KNLR C DCH K+ISKI REIIVRD NRFH F EG CSC
Sbjct: 760 ALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSC 819
Query: 601 KDFW 604
D+W
Sbjct: 820 GDYW 823
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 215/428 (50%), Gaps = 4/428 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+++G+ F+ A+E + ++ EG +F +LK L H+ K G
Sbjct: 119 LMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLG 178
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + FV T+L++ Y CG + A VFD I K+ V+WTA++S Y E A+N F
Sbjct: 179 HDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFS 238
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G KP+ F + L A L K IHG + V +L+D+YAKCG
Sbjct: 239 KMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCG 298
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A +F+ +P D++ WS +I YA + ++A +MF M R + P +++ GVL
Sbjct: 299 DIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQ 358
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA++ LELG + + + S +G L+DMYAKC M + ++F ++D ++V
Sbjct: 359 ACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVS 418
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN ++ G +G+ + A VF ++ + TF +L C + + Q + +
Sbjct: 419 WNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIE 478
Query: 361 R-VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ F+ ++ ++D + G + +A ++ +S+ +E + + W ++++ LH +
Sbjct: 479 KSTFNNDTIV--CNSLIDTYAKCGFIRDALKVFESI-VECDVVSWNSIISAYALHGRATN 535
Query: 420 AEHVLNQL 427
A + +++
Sbjct: 536 ALELFDRM 543
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 185/376 (49%), Gaps = 4/376 (1%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAG--LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
L+ C D + G H+ +V+ G D F LLN Y G LA A ++FD +P++
Sbjct: 52 LQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPER 111
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
N VS+ ++ GY G EEA+ +FRRL G + + F + +L + A IH
Sbjct: 112 NRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIH 171
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
+ G RN FV T+L+D Y+ CG + AR VFD + KD V+W++M+ Y+ N P+
Sbjct: 172 ACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPE 231
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
AL+ F M+ KP + + L A L + LG + + + P +G L+
Sbjct: 232 YALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALL 291
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
DMYAKCG + A +F + D ++W+ ++S + + + AF +F ++ + + PN
Sbjct: 292 DMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEF 351
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
+ G+L C + ++ G Q N ++ + + M D+ + ++ + E+ S
Sbjct: 352 SLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALM-DMYAKCRNMENSLEIFSS 410
Query: 395 MPMEPNAIVWGALLAG 410
+ + N + W ++ G
Sbjct: 411 L-QDANEVSWNTIIVG 425
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 149/291 (51%), Gaps = 18/291 (6%)
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG--KGRNVFVATSLVDLYAKCGNMEKA 185
K DS++ R L C GD + +H V + G + F A L++ YAK G + A
Sbjct: 42 KLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATA 101
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
RR+FD MPE++ VS+ +++QGYA G +EAL++F +QRE + ++ + +L ++
Sbjct: 102 RRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTM 161
Query: 246 GA--LELGVWASSFM---ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A L G+ A + +RN F +GT LID Y+ CG + A VF + KD V
Sbjct: 162 DAPGLACGIHACACKLGHDRNAF-----VGTALIDAYSLCGAVCHARCVFDGIVGKDAVT 216
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG--CTHAGLVDEGRQFFNS 358
W A+VS S N + A F ++ G +PN L C + L+ +G S
Sbjct: 217 WTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGC-S 275
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ ++ P + G ++D+ + G +++AH + + +P + + I+W L++
Sbjct: 276 VKTLYDTEPHVG--GALLDMYAKCGDIEDAHAIFEMIPHD-DVILWSFLIS 323
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/589 (38%), Positives = 347/589 (58%), Gaps = 37/589 (6%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADAL--KVFDDIPDKNVVSWTAIISGYINEG 110
H +++ GLD ++ T L+ G D +V + + +N WTA+I GY EG
Sbjct: 70 HGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWTAVIRGYTIEG 129
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+EAI M+ + + P SF+ +L AC +GDL+ + H V+V
Sbjct: 130 KFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGN 189
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVS------------------------------- 199
+++D+Y KCG++ AR+VFD+MPE+D++S
Sbjct: 190 TMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFESLPTKDMVA 249
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W++M+ G+A N P+EAL+ F M++ ++ + T+ G +SACA LGA + A +
Sbjct: 250 WTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQ 309
Query: 260 RNEFLSNP--VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
++ + + V+G+ LIDMY+KCG + +A VF M +K+ +++++ GL+ +G + A
Sbjct: 310 KSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGLATHGRAQEA 369
Query: 318 FGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
+F + + I+PN TFVG L C+H+GLVD+GRQ F SM + F + P +HY CMV
Sbjct: 370 LDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMV 429
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSG 436
DLLGR+G+L EA ELIK+M +EP+ VWGALL CR+H D+AE L LEP G
Sbjct: 430 DLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHLFELEPDIIG 489
Query: 437 NYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW-VEVDGVVHEFLVGDNSHPLSE 495
NY+LLSN+YS++ W +R ++ +KG++K SW V+ +G +H+F G+ +HP+S+
Sbjct: 490 NYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSK 549
Query: 496 KIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVI 555
KI KL+EL +L A G+ P V +D+ + K+ L H+EKLALAF L+TT I
Sbjct: 550 KIQDKLEELVERLTALGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDYTI 609
Query: 556 RIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+I KNLR+C DCH ++L S++TGR II+RDN RFH F G+CSC DFW
Sbjct: 610 KIMKNLRMCQDCHMFMRLASEVTGRVIIMRDNMRFHHFRSGACSCGDFW 658
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 182/356 (51%), Gaps = 42/356 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ F AI Y MR E P +FTF +LKAC D LG + H+ +
Sbjct: 121 VIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLR 180
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE------- 113
C +V +++++YV CG + A KVFD++P+++V+SWT +I+ Y GN+E
Sbjct: 181 GFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFE 240
Query: 114 ------------------------EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
EA+ F R+ G++ D ++ ++AC QLG
Sbjct: 241 SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKY 300
Query: 150 AKWIHGYVNEAG--KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
A ++G +V + ++L+D+Y+KCGN+E+A VF M K++ S+SSMI G
Sbjct: 301 ADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGL 360
Query: 208 ASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALELG--VWASSFMERNEFL 264
A++G +EALD+F+ M + +KP T VG L+AC+ G ++ G V+AS + F
Sbjct: 361 ATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMY---QTFG 417
Query: 265 SNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
P T ++D+ + GR+ +A ++ + M + VW A++ ++ +A
Sbjct: 418 VEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIA 473
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 157/397 (39%), Gaps = 70/397 (17%)
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
F +I + + +++IS + NL + + +L +GL + + +++ T+LG
Sbjct: 38 TFSEISHQRELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLG- 96
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
+D Y RRV + + ++ W+++I+G
Sbjct: 97 ------------------------VPMDPY--------PRRVIEPVQFRNPFLWTAVIRG 124
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
Y G EA+ M+ M++E + P +T +L AC S+G L LG + R
Sbjct: 125 YTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCF 184
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKD------------------------------- 295
+G T+IDMY KCG + A KVF EM +
Sbjct: 185 VYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFESLPT 244
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG---LVDEG 352
KD V W A+V+G + N + A F ++EK GI+ + T G + C G D
Sbjct: 245 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 304
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
Q + +S + + ++D+ + G ++EA + SM N + +++ G
Sbjct: 305 VQI--AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMN-NKNVFSYSSMILGLA 361
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
H + A + + ++ + + + SH
Sbjct: 362 THGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSH 398
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/572 (38%), Positives = 350/572 (61%), Gaps = 3/572 (0%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
++L+ CA+ G H+ I++ GL+ D L+N+Y C + A K F+++P K
Sbjct: 48 YLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVK 107
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
++VSW +I EA+ + ++ G + F+I VL C + +H
Sbjct: 108 SLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLH 167
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
+ +A N FV T+L+ +YAKC +++ A ++F+ MPEK+ V+WSSM+ GY NGF +
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHE 227
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
EAL +F N Q + + + +SACA L L G + ++ F SN + ++LI
Sbjct: 228 EALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLI 287
Query: 275 DMYAKCGRMAQACKVFREMKD-KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
DMYAKCG + +A VF+ + + + V+WNA++SG + + A +F ++++ G P+
Sbjct: 288 DMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDD 347
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
T+V +L C+H GL +EG+++F+ M R +L+P + HY CM+D+LGR+G + +A++LI+
Sbjct: 348 VTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIE 407
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWND 453
MP + +WG+LLA C+++ + AE L +EP N+GN++LL+NIY+A+ KW++
Sbjct: 408 RMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDE 467
Query: 454 AAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF 513
A+ R ++ + ++K RG SW+E+ +H F VG+ +HP + IY+KLD L +LK +
Sbjct: 468 VARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNY 527
Query: 514 VPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDV-IRIAKNLRVCGDCHEAIK 572
T + L D+EE KQ L HSEKLA+ FGL+ P+D+ IRI KNLR+CGDCH +K
Sbjct: 528 KVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCL-PRDIPIRIIKNLRICGDCHTFMK 586
Query: 573 LISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
L+SK T REIIVRD NRFH F +G CSC +FW
Sbjct: 587 LVSKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 171/309 (55%), Gaps = 3/309 (0%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ A++ M+ EG FT VL CA + ++ H+ +KA +D + FV T+L
Sbjct: 126 REALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTAL 185
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
L++Y C + DA ++F+ +P+KN V+W+++++GY+ G EEA+ +FR G D
Sbjct: 186 LHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDP 245
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
F I ++AC L L K +H +++G G N++V++SL+D+YAKCG + +A VF
Sbjct: 246 FMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQG 305
Query: 192 MPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+ E + IV W++MI G+A + EA+ +F MQ+ P+ T V VL+AC+ +G E
Sbjct: 306 VLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEE 365
Query: 251 GVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGL 308
G M R LS VL + +ID+ + G + +A + M + +W ++++
Sbjct: 366 GQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASC 425
Query: 309 SMNGYVKVA 317
+ G ++ A
Sbjct: 426 KIYGNIEFA 434
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 6/233 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+V N + A+ + + + GF F + ACA G + H++ K+G
Sbjct: 216 MMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSG 275
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-KNVVSWTAIISGYINEGNLEEAINMF 119
+ +V +SL+++Y CG + +A VF + + +++V W A+ISG+ EA+ +F
Sbjct: 276 FGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILF 335
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLG-DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
++ RG PD + V VL AC+ +G K+ V + +V + ++D+ +
Sbjct: 336 EKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGR 395
Query: 179 CGNMEKARRVFDQMPEKDIVS-WSSMIQG---YASNGFPKEALDMFYNMQREN 227
G + KA + ++MP S W S++ Y + F + A + M+ N
Sbjct: 396 AGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNN 448
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/540 (40%), Positives = 331/540 (61%), Gaps = 6/540 (1%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN-EGNLEEAINMFRRLLH 124
FV SL ++Y G L DAL++FD +P +NVV+WT +++ + +G +EA+ +
Sbjct: 105 FVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRR 164
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G+ P++++ VL ACT G L+ +H +AG +VFV +SL+D Y K G+++
Sbjct: 165 DGVAPNAYTFSSVLGACTTPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDG 221
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
RRVFD+M +D+V W+S+I G+A +G A+++F M+ T+ VL AC
Sbjct: 222 GRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTG 281
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
+ LE G + + + + + +L L+DMY KCG + A +F M +D + W+ +
Sbjct: 282 MVMLEAGRQVHAHVLKYD--RDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTM 339
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
VSGL+ NG A VF ++ G+ PN T VG+L C+HAGLV++G +F SM R+F
Sbjct: 340 VSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFG 399
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ P EH+ CMVDLLGR+G+LDEA E I M +EP++++W LL CR+HK LA +
Sbjct: 400 IQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAA 459
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+++ LEP + G VLLSN Y+ +W DA K M D+G++K G SW+E++ VH F
Sbjct: 460 REILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVF 519
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
+ GD SHP S+ I +L+ L ++K+ G+VP T+ VL D+ E+K+ L HSEK+A+ F
Sbjct: 520 IAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVF 579
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
G + IRI KNLR+CGDCH KL+SK GR I++RD RFH F +G+CSC D+W
Sbjct: 580 GTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 175/324 (54%), Gaps = 11/324 (3%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
Q A+ F +MR +G P +TF VL AC + H+ VKAGLD D FV++SL
Sbjct: 153 QEALRFLVAMRRDGVAPNAYTFSSVLGACTTP---GMLTAVHASTVKAGLDSDVFVRSSL 209
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
++ YV G L +VFD++ +++V W +II+G+ G+ AI +F R+ G +
Sbjct: 210 IDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQ 269
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++ VL ACT + L + +H +V + R++ + +L+D+Y KCG++E A +F +
Sbjct: 270 GTLTSVLRACTGMVMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHR 327
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
MP++D++SWS+M+ G A NG EAL +F M+ + + P + TMVGVL AC+ G +E G
Sbjct: 328 MPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDG 387
Query: 252 VWASSFMERNEFLSNPVL--GTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGL 308
W + F P ++D+ + G++ +A + M + D V+W ++
Sbjct: 388 -WHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGAC 446
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPN 332
M+ +A + E ++P+
Sbjct: 447 RMHKNASLA--AYAAREILKLEPD 468
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 166/328 (50%), Gaps = 14/328 (4%)
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-----GRNVFVATSLVDLYAKCGNM 182
+ D S+ R++ C + G + IH +V G +FV+ SL +YAK G +
Sbjct: 61 RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYAS-NGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ A R+FD MP +++V+W++++ AS +G +EAL M+R+ + P YT VL A
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C + G L V AS+ + S+ + ++LID Y K G + +VF EM +D VVW
Sbjct: 181 CTTPGMLT-AVHASTV--KAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVW 237
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
N++++G + +G A +F +++ G N T +L CT +++ GRQ +
Sbjct: 238 NSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVH---AH 294
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
V + + ++D+ + G L++A L MP + + I W +++G + K+ A
Sbjct: 295 VLKYDRDLILHNALLDMYCKCGSLEDADALFHRMP-QRDVISWSTMVSGLAQNGKSVEAL 353
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASH 449
V + L+ + + ++ +++ SH
Sbjct: 354 RVFD-LMKSQGVAPNHVTMVGVLFACSH 380
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF + AIE + M++ GF T VL+AC + G + H+ ++K
Sbjct: 240 IIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK-- 297
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D + +LL++Y CG L DA +F +P ++V+SW+ ++SG G EA+ +F
Sbjct: 298 YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFD 357
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLS-------TAKWIHGYVNEAGKGRNVFVATSLV 173
+ +G+ P+ ++V VL AC+ G + + K + G E +V
Sbjct: 358 LMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREH------HNCMV 411
Query: 174 DLYAKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
DL + G +++A M E D V W +++
Sbjct: 412 DLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLL 443
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/583 (39%), Positives = 360/583 (61%), Gaps = 6/583 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P T+ ++ +C ++ R H +++ G D D F+ T L+N+Y + +A KV
Sbjct: 68 PAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKV 127
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ---- 143
FD ++ + + A+ G+ EE +NM+RR+ G+ D F+ VL AC
Sbjct: 128 FDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECF 187
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+ L+ + IH ++ G V + T+LVD+YAK G + A VF+QMP K++VSWS+M
Sbjct: 188 VSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAM 247
Query: 204 IQGYASNGFPKEALDMFYNM--QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
I YA NG EAL++F + + ++L P TMV VL ACA+L ALE G ++ R
Sbjct: 248 IACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRK 307
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
S + + L+ MYA+CG++ +VF +M +D V WN+++S ++G+ K A G+F
Sbjct: 308 GLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIF 367
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ G++P+ +FV +L C+HAGLVDEG+ FNSM + P +EHY CMVDLLGR
Sbjct: 368 EEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGR 427
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+ +L+EA ++I++M +EP VWG+LL CR+H +LAE +L LEP N+GNYVLL
Sbjct: 428 ANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLL 487
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
++IY+ + W+ +++ ++ +G+QK+ G SW+EV ++ F+ D +P E++++ L
Sbjct: 488 ADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALL 547
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+L+ +LK G+VP T VL+D++ EK+ + HSEKLA+AFGLI ++ +VIRI K+L
Sbjct: 548 VKLSMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSL 607
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH K ISK +EI+VRD NRFH F +G CSC D+W
Sbjct: 608 RLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 170/314 (54%), Gaps = 8/314 (2%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDF----QLGVRSHSLIVKAGLDCDEFV 67
+ + Y M + G FT+ +VLKAC F G H+ I++ G D +
Sbjct: 153 EEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHI 212
Query: 68 KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL--HR 125
T+L+++Y G +++A VF+ +P KNVVSW+A+I+ Y G EA+ +FR L+ +
Sbjct: 213 MTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQ 272
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
L P+S ++V VL AC L L + IHGY+ G + V ++LV +YA+CG +E
Sbjct: 273 DLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELG 332
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+RVFDQM ++D+VSW+S+I Y +GF K+A+ +F M ++P + V VL AC+
Sbjct: 333 QRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHA 392
Query: 246 GALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNA 303
G ++ G + M + V ++D+ + R+ +A K+ M+ + VW +
Sbjct: 393 GLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGS 452
Query: 304 VVSGLSMNGYVKVA 317
++ ++ V++A
Sbjct: 453 LLGSCRIHCNVELA 466
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI + N A+E + + + P + T VL+ACA + G H I++
Sbjct: 247 MIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILR 306
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
GLD V ++L+ +Y CG L +VFD + ++VVSW ++IS Y G ++AI +
Sbjct: 307 KGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGI 366
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYA 177
F + + G++P S V VL AC+ G + K + ++ A G +V +VDL
Sbjct: 367 FEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLG 426
Query: 178 KCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ +E+A ++ + M E W S++
Sbjct: 427 RANRLEEAAKIIENMRIEPGPKVWGSLL 454
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/441 (47%), Positives = 294/441 (66%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
+++ T+++ YAK G +++AR +FD + E+D + W+ MI GYA +G P E L +F M
Sbjct: 4 KSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQM 63
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
++P T++ VLSAC GALE G W S++E N N +GT+LIDMY+KCG +
Sbjct: 64 LNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSL 123
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
A VF + +KD V WN++V G +M+G+ + A +F ++ G QP TF+G+L C
Sbjct: 124 EDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNAC 183
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
+HAGLV EG +FF SM + + P +EHYGCMV+LLGR+G L+EA+EL+K+M ++ + ++
Sbjct: 184 SHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVL 243
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGD 463
WG LL CRLH L E + L++ NSG YVLLSNIY+A+ W A++R++M +
Sbjct: 244 WGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKE 303
Query: 464 KGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
G +K GCS +EV+ VHEFL GD HP S +IY L+E+ LK G+ P TD VL D
Sbjct: 304 SGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLHD 363
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
+E+ +K+ L HSEKLALAFGLITT P I+I KNLRVC DCH KLISKITGR+++
Sbjct: 364 LEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRKVV 423
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
+RD NRFH F+ G CSC D+W
Sbjct: 424 MRDRNRFHHFVNGLCSCGDYW 444
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 152/252 (60%), Gaps = 4/252 (1%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T+++ Y G + +A +FD + +++ + W +I GY G E + +FR++L+ ++
Sbjct: 10 TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVR 69
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
P+ +++ VL+AC Q G L T +W+H Y+ G G NV V TSL+D+Y+KCG++E AR V
Sbjct: 70 PNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLV 129
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F+++ KD+V+W+SM+ GYA +GF ++AL +F M +P T +GVL+AC+ G +
Sbjct: 130 FERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLV 189
Query: 249 ELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
G W + ++E+ P + ++++ + G + +A ++ + M+ D+D V+W ++
Sbjct: 190 SEG-WKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLL 248
Query: 306 SGLSMNGYVKVA 317
++G + +
Sbjct: 249 GACRLHGNIALG 260
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + + M N P T VL AC + + G HS I G
Sbjct: 43 MIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNG 102
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + V TSL+++Y CG L DA VF+ I +K+VV+W +++ GY G ++A+ +F+
Sbjct: 103 IGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFK 162
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G +P + + VL AC+ G +S K+ + +E G V +V+L +
Sbjct: 163 EMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRA 222
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G +E+A + M ++D V W +++
Sbjct: 223 GYLEEAYELVKNMEIDQDPVLWGTLL 248
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/576 (38%), Positives = 338/576 (58%), Gaps = 1/576 (0%)
Query: 30 NFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFD 89
+FTF VL A D LG + HS ++K + FV +LL+ Y + DA K+FD
Sbjct: 210 SFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD 269
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
++P+++ VS+ IISGY +G + A ++FR L F +L+ + D
Sbjct: 270 EMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEM 329
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ IH + V SLVD+YAKCG E+A +F + + V W++MI Y
Sbjct: 330 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 389
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
GF +E L +F M++ ++ + T +L A AS+ +L LG SF+ ++ F+SN
Sbjct: 390 KGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS 449
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
G+ L+D+YAKCG + A + F+EM D++ V WNA++S + NG + F ++ G+
Sbjct: 450 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 509
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
QP+ +F+G+L C+H+GLV+EG FNSM++++ L P EHY +VD+L RSG+ +EA
Sbjct: 510 QPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAE 569
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW-NSGNYVLLSNIYSAS 448
+L+ MP++P+ I+W ++L CR+HK +LA +QL +E ++ YV +SNIY+A+
Sbjct: 570 KLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAA 629
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
+W + +K+ M D+G++K+ SWVE+ H F D HP E+I K+D L +
Sbjct: 630 GQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTM 689
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
+ G+ P T L + +E+ K L HSE+LA+AF LI+T I + KNLR C DCH
Sbjct: 690 EELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCH 749
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
AIK+ISKI GREI VRD+ RFH F +G CSC DFW
Sbjct: 750 AAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 180/327 (55%), Gaps = 4/327 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + ++A + + ++ F F F +L + D+++G + H+ +
Sbjct: 282 IISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTT 341
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V SL+++Y CG +A +F ++ ++ V WTA+IS Y+ +G EE + +F
Sbjct: 342 ADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFN 401
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + D + +L A + LS K +H ++ ++G NVF ++L+D+YAKCG
Sbjct: 402 KMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCG 461
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A + F +MP+++IVSW++MI YA NG + L F M L+P+ + +GVLS
Sbjct: 462 SIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLS 521
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G +E G+W + M + L +P +++DM + GR +A K+ EM D D
Sbjct: 522 ACSHSGLVEEGLWHFNSMTQIYKL-DPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPD 580
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+++W++V++ ++ ++A QL
Sbjct: 581 EIMWSSVLNACRIHKNQELARRAADQL 607
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 189/418 (45%), Gaps = 53/418 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + F+ A E + M+ G P TF +L C + + I+K G
Sbjct: 115 LIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLG 174
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V +L++ Y L A ++F ++P+
Sbjct: 175 YDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE--------------------------- 207
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
DSF+ VL A L D+ + IH +V + NVFV+ +L+D Y+K
Sbjct: 208 --------IDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHD 259
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR++FD+MPE+D VS++ +I GYA +G K A D+F +Q + + +LS
Sbjct: 260 SVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLS 319
Query: 241 ACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
++ E+G + A + + + S ++G +L+DMYAKCG+ +A +F + +
Sbjct: 320 IASNTLDWEMGRQIHAQTIVTTAD--SEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSA 377
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN- 357
V W A++S G+ + +F ++ + + + TF LL + G+Q +
Sbjct: 378 VPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSF 437
Query: 358 -----SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
MS VFS + ++ D+ + G + +A + + MP + N + W A+++
Sbjct: 438 IIKSGFMSNVFSGSALL-------DVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMISA 487
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 165/388 (42%), Gaps = 72/388 (18%)
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
IVK G D D + ++ G L+ A ++F+ +P KN VS +ISGY+ GNL EA
Sbjct: 38 IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 97
Query: 116 INMFRRLLHR-------------------------------GLKPDSFSIVRVLTACT-- 142
+F ++ R G +PD + V +L+ C
Sbjct: 98 RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 157
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
++G+ T + + + G + V +LVD Y K ++ A ++F +MPE D
Sbjct: 158 EMGNQITQ--VQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEID------ 209
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
+T VL A L + LG SF+ +
Sbjct: 210 -----------------------------SFTFAAVLCANIGLDDIVLGQQIHSFVIKTN 240
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
F+ N + L+D Y+K + A K+F EM ++D V +N ++SG + +G K AF +F
Sbjct: 241 FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFR 300
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
+L+ F +L ++ + GRQ ++ + V + I +VD+ +
Sbjct: 301 ELQFTAFDRKQFPFATMLSIASNTLDWEMGRQ-IHAQTIVTTADSEILVGNSLVDMYAKC 359
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAG 410
G+ +EA E+I + +A+ W A+++
Sbjct: 360 GKFEEA-EMIFTNLTHRSAVPWTAMISA 386
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+K F +N+ S T++ S + L N+ R++ G PD+ + +
Sbjct: 1 MKPFRPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKN 60
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
G+LS A+ + E +N ++ Y K GN+ +AR++FD M E+ V+W+ +I
Sbjct: 61 GELSQARQLF----EKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILI 116
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG---VWASSFMERN 261
GY+ KEA ++F MQR +P+Y T V +LS C E+G + + +
Sbjct: 117 GGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGC---NGHEMGNQITQVQTQIIKL 173
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
+ S ++G TL+D Y K R+ AC++F+EM + D + AV+
Sbjct: 174 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVL 217
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/606 (38%), Positives = 342/606 (56%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G N F A+ + MR EG +P +FTFP KA A G + H+L VK G
Sbjct: 79 LISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG 138
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV S ++Y DA K+FD+IP++N+ +W A IS + +G EAI F
Sbjct: 139 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 198
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
P+S + L AC+ L+ +HG V +G +V V L+D Y KC
Sbjct: 199 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK 258
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + +F +M K+ VSW S++ Y N ++A ++ +++ ++ + + VLS
Sbjct: 259 QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLS 318
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA + LELG + + +G+ L+DMY KCG + + + F EM +K+ V
Sbjct: 319 ACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 378
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEK--CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
N+++ G + G V +A +F ++ CG PN TFV LL C+ AG V+ G + F+S
Sbjct: 379 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS 438
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + + P EHY C+VD+LGR+G ++ A+E IK MP++P VWGAL CR+H K
Sbjct: 439 MRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 498
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L L L+P +SGN+VLLSN ++A+ +W +A +R + GI+K G SW+ V
Sbjct: 499 LGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVK 558
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F D SH L+++I + L +L +++AAG+ P L+D+EEEEK ++ HSE
Sbjct: 559 NQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSE 618
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLALAFGL++ IRI KNLR+CGDCH K +S REIIVRDNNRFH F +G C
Sbjct: 619 KLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGIC 678
Query: 599 SCKDFW 604
SCKD+W
Sbjct: 679 SCKDYW 684
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 194/418 (46%), Gaps = 5/418 (1%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDE--FVKTSLLNLYVHCGYLADALKVFDDIP 92
+LK +LG H+ IVK LD F+ L+N+Y + A V P
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTP 69
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
+NVVSWT++ISG G+ A+ F + G+ P+ F+ A L T K
Sbjct: 70 ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IH + G+ +VFV S D+Y K + AR++FD++PE+++ +W++ I ++G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
P+EA++ F +R + P T L+AC+ L LG+ + R+ F ++ +
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 249
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
LID Y KC ++ + +F EM K+ V W ++V+ N + A ++ + K ++ +
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 309
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
+L C ++ GR + + I +VD+ G+ G ++++ +
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKA-CVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
MP E N + +L+ G + D+A + ++ + NY+ ++ SA +
Sbjct: 369 DEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/509 (42%), Positives = 330/509 (64%), Gaps = 8/509 (1%)
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGL-KPDSFSIVRVLTACTQLGDLSTAKWIHGYV 157
W +I GY N EAI ++ ++ +G+ P++F+ +L +C +L L +H ++
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 158 NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G ++FV +L+ LY+ GN+ AR +FD+ +D+VS+++MI+GYA P+ AL
Sbjct: 62 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 121
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDM 276
+F MQ + T+V VLSACA LGA +LG ++E F N +L ++DM
Sbjct: 122 CLFGEMQ----NSDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDM 177
Query: 277 YAKCGRMAQACKVFREMKD--KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
YAKCG + A ++FR + K V+N++++GL+ +G + A VF +L G++P+
Sbjct: 178 YAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEV 237
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
TFVG+LC C H+GL++EG++ F SM + + P +EHYGCMVDLLGR G L+EA++L++
Sbjct: 238 TFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQK 297
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDA 454
MP E N+++W ALL+ CR H + E +L+ +E + YVLLSNI + +++W +A
Sbjct: 298 MPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEA 357
Query: 455 AKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFV 514
++R +M D GI+K G S++E+ G +H F+ D SHP ++I L ++A +LK+AG+V
Sbjct: 358 RQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYV 417
Query: 515 PTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLI 574
P T V+FDI+EEEK+ ++ HSEKLALAFGL+ +P D IRI KNLR+C DCH+A KL+
Sbjct: 418 PNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLV 477
Query: 575 SKITGREIIVRDNNRFHCFIEGSCSCKDF 603
S+I GREI VRD RFH F GSCSC DF
Sbjct: 478 SEIYGREITVRDTMRFHHFRNGSCSCMDF 506
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 176/326 (53%), Gaps = 16/326 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLP-TNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MIRG+ +D + AI Y SM +G P NFTFPF+L +CAR + G HS I+K
Sbjct: 5 MIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKH 64
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G + D FV+ +L++LY G L A +FD+ +++VS+ +I GY E A+ +F
Sbjct: 65 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLF 124
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI-HGYVNEAGKGRNVFVATSLVDLYAK 178
+ + D ++V VL+AC +LG K + H Y+ +N + +++D+YAK
Sbjct: 125 GEMQN----SDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAK 180
Query: 179 CGNMEKARRVFDQMPE--KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
CG+++ A +F ++ + K ++SMI G A +G + A+ +F + LKP+ T V
Sbjct: 181 CGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFV 240
Query: 237 GVLSACASLGALELG--VWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFRE 292
GVL AC G +E G ++ S F N + P + ++D+ + G + +A + ++
Sbjct: 241 GVLCACGHSGLIEEGKKLFESMF---NAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQK 297
Query: 293 MK-DKDQVVWNAVVSGLSMNGYVKVA 317
M + + V+W A++S +G VK+
Sbjct: 298 MPFEANSVIWRALLSACRTHGNVKIG 323
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/559 (39%), Positives = 338/559 (60%), Gaps = 3/559 (0%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G R HS + G + L+++Y CG L +A +F+ I ++ VVSW+A+I Y
Sbjct: 4 GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYAL 63
Query: 109 EGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG--KGRN 165
G +EA+ +F R+ + G ++P++ + V AC + DL + IH +G K N
Sbjct: 64 HGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSN 123
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
+ +L+++Y +CG++E+AR+VFD M D SW+SMI N EAL++F+ M
Sbjct: 124 AILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNL 183
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
E + P T+ VL+ACA GAL++G S ++ + F S+ + T L+DMYAKCG +
Sbjct: 184 EGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLEC 243
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
+ KVF M+ ++ V W A+++ L+ +G A +F ++ G+ + TF+ +L C+H
Sbjct: 244 SSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSH 303
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
AGL+ E +FF+SM +++ P HY +D +GR+G+L +A ELI SMP P + W
Sbjct: 304 AGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWK 363
Query: 406 ALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKG 465
LL CR+H + + A V L L P +S Y LL N+Y+A+ ++ D ++R M D+G
Sbjct: 364 TLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRG 423
Query: 466 IQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIE 525
++K+ G S++EV VHEF+ GD +HP ++I +L++L +++ AG+VP T VL +
Sbjct: 424 LKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVN 483
Query: 526 EEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVR 585
EEEK+ + HSEKLA+AFGLI T P + I KNLRVC DCH A K+I+KI R I+VR
Sbjct: 484 EEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVR 543
Query: 586 DNNRFHCFIEGSCSCKDFW 604
D +RFH F +G CSCKD+W
Sbjct: 544 DTHRFHHFEDGQCSCKDYW 562
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 166/331 (50%), Gaps = 5/331 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI + + Q A+ ++ MRN+G + P TF V AC D + G H+L + +
Sbjct: 57 MIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMAS 116
Query: 60 G--LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
G + ++ +LLN+YV CG L +A KVFD + + SWT++I+ L EA+
Sbjct: 117 GELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALE 176
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+F R+ G+ P S ++ VL AC G L K IH ++ +G +V T+L+D+YA
Sbjct: 177 LFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYA 236
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCG++E + +VF M ++ VSW++MI A +G EAL++F M E + + T +
Sbjct: 237 KCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFIC 296
Query: 238 VLSACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-D 295
VL AC+ G ++ + + S +E +D + GR+ A ++ M
Sbjct: 297 VLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFH 356
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
+ + W +++ ++ + A V L K
Sbjct: 357 PETLTWKTLLNACRIHSQAERATKVAELLSK 387
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/530 (41%), Positives = 341/530 (64%), Gaps = 9/530 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN-EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MIR + S+ AI YN MR + L +T+PFV KACA + + G H +IV+
Sbjct: 75 MIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRI 134
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G + D F+++SLLN Y+ CG + +A +VFD+ K+VV W A+I+GY +G + ++ +F
Sbjct: 135 GYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVF 194
Query: 120 RRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN-VFVATSLVDLYA 177
+ ++ + ++P+ +++ ++ AC + +L + IHGY+ + R V + +L++LY
Sbjct: 195 KEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYV 254
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCG ++ AR++FD++PEK+ V W+S+I GY G E +++ M NLKP+ +T+ G
Sbjct: 255 KCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSG 314
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
VLSACA +GA LG W F E+ + + +GT LIDMYAKCG + A KVF +M +++
Sbjct: 315 VLSACAQMGAFNLGNWVHRFAEKKG-IWDVFIGTALIDMYAKCGFIGAARKVFDQMNERN 373
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
WNA++SG + +G + A +F ++ + G +P+ TF+ +L C H+GLV+ G+Q+F+
Sbjct: 374 VATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFD 433
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
M + + + P +EHYGCMVDLLGR+G L EA ELIK M +EPN +VWGALL+ C +H
Sbjct: 434 LMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNI 493
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
++ E + +I L + G+YV+L+N+Y+++ ++N +R MM +KGI K GCS +E+
Sbjct: 494 EIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEI 553
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEE 527
VVHEF+V D HP SE+IYS LDEL+ KLK AG+VP L ++EE
Sbjct: 554 GDVVHEFVVADKMHPRSEEIYSVLDELSKKLKMAGYVP-----LLALDEE 598
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 185/383 (48%), Gaps = 16/383 (4%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ + + L +F+ T ++N ++ L A +VF+ + + + A+I Y +
Sbjct: 26 HAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQTP 85
Query: 113 EEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
AI+++ ++ + + D ++ V AC + K +HG + G + F+ +S
Sbjct: 86 CVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSS 145
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLKP 230
L++ Y CG + A++VFD+ KD+V W+++I GYA G ++ +F M + + ++P
Sbjct: 146 LLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRP 205
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKV 289
TM+G++ AC L+LG +M ++ L V L LI++Y KCG + A K+
Sbjct: 206 NEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKL 265
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F E+ +K+ VVWN+++ G G + + ++ ++P+ T G+L C G
Sbjct: 266 FDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAF 325
Query: 350 DEGRQFFNSMSR-----VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
+ G + VF T +I D+ + G + A ++ M E N W
Sbjct: 326 NLGNWVHRFAEKKGIWDVFIGTALI-------DMYAKCGFIGAARKVFDQMN-ERNVATW 377
Query: 405 GALLAGCRLHKKTDLAEHVLNQL 427
A+L+G H + + A + +++
Sbjct: 378 NAILSGYASHGQAESAIELFSEM 400
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 149/292 (51%), Gaps = 7/292 (2%)
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
S++ ++ CT + L K IH + F+ T +++ + ++ A +VF+Q
Sbjct: 8 SVLALIETCTNIQQL---KQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQT 64
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELG 251
E D +++MI+ Y+S+ P A+ ++ M+ +N+ + YT V ACAS A+E G
Sbjct: 65 QEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKG 124
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ R + + L ++L++ Y CG + A +VF E KD V WNA+++G +
Sbjct: 125 KEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQ 184
Query: 312 GYVKVAFGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
G V +FGVF ++ E ++PN T +GL+ C + + GR M + L ++
Sbjct: 185 GMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVK 244
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG-CRLHKKTDLAE 421
+++L + G LD A +L +P E N +VW +L+ G C++ ++ E
Sbjct: 245 LEAALINLYVKCGYLDGARKLFDEIP-EKNTVVWNSLICGYCQIGSLNEVIE 295
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/607 (37%), Positives = 365/607 (60%), Gaps = 8/607 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + + ++ MR G + F LK C+++ + + H +VK G
Sbjct: 277 MIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNG 336
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINM 118
+ + ++T+L+ Y C + +A K+F + D NVV+WTA+I G++ N E+A+++
Sbjct: 337 YEFAQDIRTALMVTYSKCSSVDEAFKLFS-MADAAHNVVTWTAMIGGFVQNNNNEKAVDL 395
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++ G++P+ F+ VL S +H + +A + VAT+L+D Y K
Sbjct: 396 FCQMSREGVRPNHFTYSTVLAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVK 451
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
GN+ ++ RVF +P KDIV+WS+M+ G A ++A+++F + +E +KP YT V
Sbjct: 452 TGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSV 511
Query: 239 LSACASLGA-LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
++AC+S A +E G + ++ + + + L+ MY+K G + A KVF +++D
Sbjct: 512 INACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERD 571
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WN++++G +G K A VF ++ G+ + TF+G+L CTHAGLV+EG ++FN
Sbjct: 572 IVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFN 631
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
M + + + IEHY CMVDL R+G D+A ++I MP + +W LLA CR+H+
Sbjct: 632 IMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNL 691
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
+L + +L++L+P ++ YVLLSNI++ + W + A +R +M ++ ++K GCSW+E+
Sbjct: 692 ELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEI 751
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
+ FL GD SHP S+ +Y+KL+EL+ KLK G+ P T++V D+EEE K+ L+ HS
Sbjct: 752 KNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHS 811
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
E+LA+A+GLI P I+I KNLR+CGDCH I+LIS I R +IVRD+NRFH F G
Sbjct: 812 ERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGV 871
Query: 598 CSCKDFW 604
CSC +W
Sbjct: 872 CSCGGYW 878
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 208/418 (49%), Gaps = 12/418 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N I N M+ EG P FTF VL A A E + GV+ H++IVK G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +L+ +Y+ + DA VFD + ++ V+W +I GY G E MF
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+K L C+Q +L+ K +H V + G + T+L+ Y+KC
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355
Query: 181 NMEKARRVFDQM-PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++++A ++F ++V+W++MI G+ N ++A+D+F M RE ++P ++T VL
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL 415
Query: 240 SACAS--LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+ S L L + + + + P + T L+D Y K G + ++ +VF + KD
Sbjct: 416 AGKPSSLLSQLHAQIIKAYYEKV------PSVATALLDAYVKTGNVVESARVFYSIPAKD 469
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC-THAGLVDEGRQFF 356
V W+A+++GL+ + A VF QL K G++PN TF ++ C + A V+ G+Q
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + + ++ + + G ++ A E + + E + + W +++ G H
Sbjct: 530 ATAVKSGKSNALCVS-SALLTMYSKKGNIESA-EKVFTRQEERDIVSWNSMITGYGQH 585
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 196/426 (46%), Gaps = 9/426 (2%)
Query: 5 FVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCD 64
F N+ + A+ + + + G T LK C D +G + H +K+G D
Sbjct: 79 FSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLED 138
Query: 65 EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
V TSL+++Y+ D +FD++ KNVVSWT+++SGY G +E I++ ++
Sbjct: 139 VSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQM 198
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G+ P+ F+ VL A + +H + + G FV +L+ +Y K +
Sbjct: 199 EGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGD 258
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
A VFD M +D V+W+ MI GYA+ GF E MF+ M+ +K L C+
Sbjct: 259 AEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQ 318
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD--KDQVVWN 302
L + +N + + T L+ Y+KC + +A K+F M D + V W
Sbjct: 319 QRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLF-SMADAAHNVVTWT 377
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
A++ G N + A +F Q+ + G++PN T+ +L G + L Q +
Sbjct: 378 AMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAY--- 434
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ P + ++D ++G + E+ + S+P + + + W A+L G + ++ A
Sbjct: 435 YEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DIVAWSAMLTGLAQTRDSEKAME 491
Query: 423 VLNQLI 428
V QL+
Sbjct: 492 VFIQLV 497
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 154/338 (45%), Gaps = 23/338 (6%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A ++FD+ P K++ + ++ + + EA+++F+ L GL D ++ L C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L D + +H ++G +V V TSLVD+Y K + E R +FD+M K++VSW+S+
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
+ GYA NG E + + MQ E + P +T VL A A +E GV + + +N F
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ LI MY K + A VF M +D V WN ++ G + G+ F +F +
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 324 LEKCGIQPNGNTFVGLLCGCT-----------HAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ G++ + F L C+ H G+V G +F + +T
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT------ 350
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ +DEA +L N + W A++ G
Sbjct: 351 ------YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/596 (37%), Positives = 356/596 (59%), Gaps = 3/596 (0%)
Query: 11 FQHAIEFYN--SMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK 68
++ A+E + + ++GF T+ ++ AC + R + +V +G + D +V
Sbjct: 96 YREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVM 155
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+L ++V CG + DA K+FD++P+K++ SW +I G+++ GN EA +F +
Sbjct: 156 NRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFND 215
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
S + ++ A LG + + IH + G G + FV+ +L+D+Y+KCG++E A V
Sbjct: 216 GRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCV 275
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FDQMPEK V W+S+I YA +G+ +EAL +Y M+ K +++T+ V+ CA L +L
Sbjct: 276 FDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASL 335
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
E A + + R + ++ V T L+D Y+K GRM A VF M+ K+ + WNA+++G
Sbjct: 336 EYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGY 395
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+G + A +F Q+ + G+ PN TF+ +L C+++GL + G + F SMSR + P
Sbjct: 396 GNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 455
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
HY CMV+LLGR G LDEA+ELI+S P +P +W LL CR+H+ +L + L
Sbjct: 456 AMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLY 515
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
+EP NY++L N+Y++S K +AA + + KG++ + C+W+EV + FL GD
Sbjct: 516 GMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGD 575
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
SH +++IY K++ + ++ G+V +L D++EEE Q L HSEKLA+AFGLI
Sbjct: 576 KSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEEE-QRILKYHSEKLAIAFGLIN 634
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
T ++I + RVCGDCH AIK I+ +TGREI+VRD +RFH F +GSCSC D+W
Sbjct: 635 TPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 208/444 (46%), Gaps = 51/444 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GFV + F A + M E + TF +++A A Q+G + HS +K G
Sbjct: 189 MIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRG 248
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+++Y CG + DA VFD +P+K V W +II+ Y G EEA++ +
Sbjct: 249 VGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYY 308
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G K D F+I V+ C +L L AK H + G ++ T+LVD Y+K G
Sbjct: 309 EMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWG 368
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
ME A VF++M K+++SW+++I GY ++G +EA++MF M RE + P + T + VLS
Sbjct: 369 RMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLS 428
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+ G E G M R D K M AC
Sbjct: 429 ACSYSGLSERGWEIFYSMSR--------------DHKVKPRAMHYAC------------- 461
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
+V L G + A+ + + +P N + LL C ++ G+ +
Sbjct: 462 ---MVELLGREGLLDEAYEL---IRSAPFKPTTNMWATLLTACRMHENLELGKL---AAE 512
Query: 361 RVFSLTP-MIEHYGCMVDLLGRSGQLDEAHELI-----KSMPMEPNAIVW-------GAL 407
++ + P + +Y +++L SG+L EA ++ K + M P A W A
Sbjct: 513 NLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLP-ACTWIEVKKQSYAF 571
Query: 408 LAGCRLHKKT-DLAEHVLNQLIAL 430
L G + H +T ++ E V N ++ +
Sbjct: 572 LCGDKSHSQTKEIYEKVNNMMVEI 595
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 166/366 (45%), Gaps = 37/366 (10%)
Query: 63 CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL 122
C + K L N Y L + L++ D D ++ A++S + ++ +F +
Sbjct: 84 CIQIEKLVLCNRYREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYM 143
Query: 123 LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
++ G +PD + + RVL FV + KCG M
Sbjct: 144 VNSGFEPDLYVMNRVL----------------------------FV-------HVKCGLM 168
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
AR++FD+MPEKD+ SW +MI G+ +G EA +F M E T ++ A
Sbjct: 169 LDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRAS 228
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
A LG +++G S + + + LIDMY+KCG + A VF +M +K V WN
Sbjct: 229 AGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWN 288
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
++++ +++GY + A + ++ G + + T ++ C ++ +Q ++ R
Sbjct: 289 SIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRR 348
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
T ++ + +VD + G++++A + M N I W AL+AG H + + A
Sbjct: 349 GYDTDIVANTA-LVDFYSKWGRMEDAWHVFNRM-RRKNVISWNALIAGYGNHGQGEEAVE 406
Query: 423 VLNQLI 428
+ Q++
Sbjct: 407 MFEQML 412
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/605 (35%), Positives = 350/605 (57%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ + AI + M+ G+ PT FTF +L A + D + G + H +VK
Sbjct: 270 LLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCN 329
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +LL+ Y + +A K+F ++P+ + +S+ +++ Y G ++E++ +F+
Sbjct: 330 FVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFK 389
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L G +F +L+ +L + IH + V SLVD+YAKCG
Sbjct: 390 ELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCG 449
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+A R+F + + V W++MI Y G ++ L +F MQR + + T ++
Sbjct: 450 EFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVR 509
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASL +L LG S + + ++SN G+ L+DMYAKCG + A ++F+EM ++ V
Sbjct: 510 ACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVS 569
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++S + NG +F ++ + G+QP+ + + +LC C+H GLV+EG Q+F+SM+
Sbjct: 570 WNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMT 629
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
R++ L P EHY +D+L R G+ DEA +L+ MP EP+ I+W ++L C +HK +LA
Sbjct: 630 RIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELA 689
Query: 421 EHVLNQLIALEPW-NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ NQL ++ ++ YV +SNIY+A+ +W++ K++ M ++G++K+ SWVE+
Sbjct: 690 KKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKH 749
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
H F D +HP +I KLDEL K+ G+ P + L +++EE K L HSE+
Sbjct: 750 KTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSER 809
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
+A+AF LI+T I + KNLR C DCH AIK+ISKI REI VRD++RFH F +G C+
Sbjct: 810 IAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCT 869
Query: 600 CKDFW 604
C+D+W
Sbjct: 870 CRDYW 874
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 233/458 (50%), Gaps = 21/458 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS-HSLIVKA 59
+I G+ N+ F+ A + M G P + + +L E D VR HS ++K
Sbjct: 169 LIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFT-EFDSVNEVRQVHSHVIKL 227
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D V SLL+ Y L A ++F+DIP+++ V++ A+++GY EG EAIN+F
Sbjct: 228 GYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLF 287
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G +P F+ +LTA QL D+ + +HG+V + NVFVA +L+D Y+K
Sbjct: 288 FKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKH 347
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ +A ++F +MPE D +S++ ++ YA NG KE+L++F +Q + +L
Sbjct: 348 DRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLL 407
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
S A L++G S + +S ++G +L+DMYAKCG +A ++F ++ + V
Sbjct: 408 SIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSV 467
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS- 358
W A++S G + +F ++++ I + T+ ++ C + G+Q +
Sbjct: 468 PWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHI 527
Query: 359 -----MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+S VFS + +VD+ + G + +A ++ + MP+ N++ W AL++
Sbjct: 528 IGSGYISNVFSGS-------ALVDMYAKCGSIKDALQMFQEMPVR-NSVSWNALISAYAQ 579
Query: 414 HKKTDLAEHVLNQLI--ALEPWNSGNYVLLSNIYSASH 449
+ D + +++ L+P + LLS + + SH
Sbjct: 580 NGDGDCTLRLFEEMVRSGLQP---DSVSLLSILCACSH 614
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 199/390 (51%), Gaps = 6/390 (1%)
Query: 20 SMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCG 79
S+ GF P + F++K+ + D G R + + F +++ Y+ G
Sbjct: 91 SIIKTGFNPNTYRSNFLVKSFLQRGDLN-GARK---LFDEMPHKNIFSTNTMIMGYIKSG 146
Query: 80 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
L++A +FD + + V+WT +I GY EA +F + G+ PD S+ +L+
Sbjct: 147 NLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLS 206
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
T+ ++ + +H +V + G + V+ SL+D Y K ++ A ++F+ +PE+D V+
Sbjct: 207 GFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVT 266
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
+++++ GY+ GF +EA+++F+ MQ +P +T +L+A L +E G F+
Sbjct: 267 FNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVV 326
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
+ F+ N + L+D Y+K R+ +A K+F EM + D + +N +V+ + NG VK +
Sbjct: 327 KCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLE 386
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F +L+ G F LL + +D GRQ +S + V I +VD+
Sbjct: 387 LFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQ-IHSQTIVTDAISEILVGNSLVDMY 445
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ G+ EA+ + + ++ +++ W A+++
Sbjct: 446 AKCGEFGEANRIFSDLAIQ-SSVPWTAMIS 474
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/606 (38%), Positives = 342/606 (56%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G N F A+ + MR EG +P +FTFP KA A G + H+L VK G
Sbjct: 29 LISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG 88
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV S ++Y DA K+FD+IP++N+ +W A IS + +G EAI F
Sbjct: 89 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 148
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
P+S + L AC+ L+ +HG V +G +V V L+D Y KC
Sbjct: 149 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK 208
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + +F +M K+ VSW S++ Y N ++A ++ +++ ++ + + VLS
Sbjct: 209 QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLS 268
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA + LELG + + +G+ L+DMY KCG + + + F EM +K+ V
Sbjct: 269 ACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 328
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEK--CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
N+++ G + G V +A +F ++ CG PN TFV LL C+ AG V+ G + F+S
Sbjct: 329 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS 388
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + + P EHY C+VD+LGR+G ++ A+E IK MP++P VWGAL CR+H K
Sbjct: 389 MRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 448
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L L L+P +SGN+VLLSN ++A+ +W +A +R + GI+K G SW+ V
Sbjct: 449 LGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVK 508
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F D SH L+++I + L +L +++AAG+ P L+D+EEEEK ++ HSE
Sbjct: 509 NQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSE 568
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLALAFGL++ IRI KNLR+CGDCH K +S REIIVRDNNRFH F +G C
Sbjct: 569 KLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGIC 628
Query: 599 SCKDFW 604
SCKD+W
Sbjct: 629 SCKDYW 634
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 176/377 (46%), Gaps = 2/377 (0%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y + A V P +NVVSWT++ISG G+ A+ F + G+ P+ F+
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
A L T K IH + G+ +VFV S D+Y K + AR++FD++P
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
E+++ +W++ I ++G P+EA++ F +R + P T L+AC+ L LG+
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ R+ F ++ + LID Y KC ++ + +F EM K+ V W ++V+ N
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
+ A ++ + K ++ + +L C ++ GR + + I
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA-CVERTIFVGS 299
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
+VD+ G+ G ++++ + MP E N + +L+ G + D+A + ++
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 358
Query: 434 NSGNYVLLSNIYSASHK 450
+ NY+ ++ SA +
Sbjct: 359 PTPNYMTFVSLLSACSR 375
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/558 (40%), Positives = 340/558 (60%), Gaps = 33/558 (5%)
Query: 80 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG--LKPDSFSIVRV 137
YL A ++ D + + ++I + E++ + +RR+L G LKPD++++ +
Sbjct: 55 YLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFL 114
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA-------------------- 177
+ ACT L T +HG G + V T L+ LYA
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 178 -----------KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE 226
+CG++ AR++F+ MPE+D ++W++MI GYA G +EAL++F+ MQ E
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+K M+ VLSAC LGAL+ G WA S++ERN+ L TTL+D+YAKCG M +A
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
+VF M++K+ W++ ++GL+MNG+ + +F +++ G+ PN TFV +L GC+
Sbjct: 295 MEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVV 354
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
G VDEG++ F+SM F + P +EHYGC+VDL R+G+L++A +I+ MPM+P+A VW +
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
LL R++K +L +++ LE N G YVLLSNIY+ S+ W++ + +R M KG+
Sbjct: 415 LLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGV 474
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
+K GCS +EV+G VHEF VGD SHP +I + +++ +L+ AG+ T V+FDI+E
Sbjct: 475 RKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDE 534
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
EEK+ L HSEK A+AFG+++ IRI KNLRVCGDCH+ +ISKI REIIVRD
Sbjct: 535 EEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRD 594
Query: 587 NNRFHCFIEGSCSCKDFW 604
NRFH F +G CSC FW
Sbjct: 595 RNRFHHFKDGHCSCNGFW 612
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 186/358 (51%), Gaps = 39/358 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MIR + + + +FY + + G P N+T F+++AC + G++ H + ++
Sbjct: 77 MIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIR 136
Query: 59 AGLDCDEFVKTSLLNLYV-------------------------------HCGYLADALKV 87
G D D V+T L++LY CG + A K+
Sbjct: 137 RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKL 196
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F+ +P+++ ++W A+ISGY G EA+N+F + G+K + +++ VL+ACTQLG L
Sbjct: 197 FEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL 256
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+W H Y+ V +AT+LVDLYAKCG+MEKA VF M EK++ +WSS + G
Sbjct: 257 DQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGL 316
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A NGF ++ L++F M+++ + P T V VL C+ +G ++ G M RNEF P
Sbjct: 317 AMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM-RNEFGIEP 375
Query: 268 VLG--TTLIDMYAKCGRMAQACKVFREMKDKDQ-VVWNAVVSGLSMNGYVKVAFGVFG 322
L L+D+YA+ GR+ A + ++M K VW++++ M Y + GV
Sbjct: 376 QLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM--YKNLELGVLA 431
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/573 (38%), Positives = 344/573 (60%), Gaps = 2/573 (0%)
Query: 26 FLPTNFTF-PFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA 84
++P + F +LK C G H+ I+++ D + +LLN+Y CG L +A
Sbjct: 55 YIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEA 114
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
KVF+ +P ++ V+WT +ISGY +A+ F ++L G P+ F++ V+ A
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
+HG+ + G NV V ++L+DLY + G M+ A+ VFD + ++ VSW+++I
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G+A ++AL++F M R+ +P +++ + AC+S G LE G W ++M ++
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
G TL+DMYAK G + A K+F + +D V WN++++ + +G+ K A F ++
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ GI+PN +F+ +L C+H+GL+DEG ++ M + + P HY +VDLLGR+G
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGD 413
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
L+ A I+ MP+EP A +W ALL CR+HK T+L + + L+P + G +V+L NI
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 473
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y++ +WNDAA++R M + G++K CSWVE++ +H F+ D HP E+I K +E+
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEV 533
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
K+K G+VP T HV+ ++++E++ L HSEK+ALAF L+ T P I I KN+RVC
Sbjct: 534 LAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVC 593
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
GDCH AIKL SK+ GREIIVRD NRFH F + S
Sbjct: 594 GDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 174/312 (55%), Gaps = 1/312 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ +D A+ F+N M G+ P FT V+KA A E G + H VK G
Sbjct: 132 LISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 191
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V ++LL+LY G + DA VFD + +N VSW A+I+G+ E+A+ +F+
Sbjct: 192 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQ 251
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G +P FS + AC+ G L KW+H Y+ ++G+ F +L+D+YAK G
Sbjct: 252 GMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG 311
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR++FD++ ++D+VSW+S++ YA +GF KEA+ F M+R ++P + + VL+
Sbjct: 312 SIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLT 371
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQV 299
AC+ G L+ G M+++ + T++D+ + G + +A + EM +
Sbjct: 372 ACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA 431
Query: 300 VWNAVVSGLSMN 311
+W A+++ M+
Sbjct: 432 IWKALLNACRMH 443
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/658 (35%), Positives = 361/658 (54%), Gaps = 59/658 (8%)
Query: 6 VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
+ ++ Q +E + M+ T VL+AC + + H + + GLD D
Sbjct: 751 LQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDV 810
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIIS-----GYINE----------- 109
+ L+++Y G L A +VFD + ++N SW ++IS G++N+
Sbjct: 811 SLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESS 870
Query: 110 -------------------GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
G EE +N+ +R+ G KP+S S+ VL A ++LG L+
Sbjct: 871 DMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMG 930
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
K HGYV G +V+V TSL+D+Y K ++ A+ VFD M ++I +W+S++ GY+
Sbjct: 931 KETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFK 990
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLS------------------------ACASLG 246
G ++AL + M++E +KP+ T G++S ACASL
Sbjct: 991 GMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLS 1050
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
L+ G RN F+ + + T LIDMY+K + A KVFR +++K WN ++
Sbjct: 1051 LLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIM 1110
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G ++ G K A VF +++K G+ P+ TF LL C ++GL+ EG ++F+SM + +
Sbjct: 1111 GFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIV 1170
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
P +EHY CMVDLLGR+G LDEA +LI +MP++P+A +WGALL CR+HK AE
Sbjct: 1171 PRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKN 1230
Query: 427 LIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLV 486
L LEP NS NY+L+ N+YS ++W D +R +MG G++ + SW++++ VH F
Sbjct: 1231 LFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSS 1290
Query: 487 GDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGL 546
+ HP + KIY +L +L +++K G+VP + V +++E EKQ L H+EKLA+ +GL
Sbjct: 1291 DEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGL 1350
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I + IR+ KN R+C DCH A K IS + RE+ +RD RFH F EG CSC DFW
Sbjct: 1351 IKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 186/368 (50%), Gaps = 35/368 (9%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
+E + + +G + + + LK C R D LG+ H ++K G D D +++ +L+N
Sbjct: 659 LEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNF 718
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
Y C L A +VF ++P+ + W I + L++ + +FR++ LK ++ +I
Sbjct: 719 YGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATI 778
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
VRVL AC ++G L+ AK IHGYV G +V + L+ +Y+K G +E ARRVFD M
Sbjct: 779 VRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMEN 838
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFY--------------------------------- 221
++ SW+SMI YA+ GF +A +FY
Sbjct: 839 RNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNI 898
Query: 222 --NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK 279
MQ E KP +M VL A + LG L +G ++ RN F + +GT+LIDMY K
Sbjct: 899 LQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVK 958
Query: 280 CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
+ A VF MK+++ WN++VSG S G + A + Q+EK GI+P+ T+ G+
Sbjct: 959 NHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGM 1018
Query: 340 LCGCTHAG 347
+ G G
Sbjct: 1019 ISGYAMWG 1026
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 180/393 (45%), Gaps = 36/393 (9%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINE-GNLEEAINMFRRLLHRGLK 128
+L++ Y+ G A VF +N + W + + + + G+L + +F+ L +G+
Sbjct: 612 NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 671
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
DS L CT++ D+ IHG + + G +V++ +L++ Y +C +EKA +V
Sbjct: 672 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 731
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F +MP + + W+ I + ++ +++F MQ LK E T+V VL AC +GAL
Sbjct: 732 FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 791
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
++ R S+ L LI MY+K G++ A +VF M++++ WN+++S
Sbjct: 792 NAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSY 851
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE---------GRQFFNSM 359
+ G++ A+ +F +LE ++P+ T+ LL G G +E G F +
Sbjct: 852 AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 911
Query: 360 SRVFSLTPMIEHYG-------------------------CMVDLLGRSGQLDEAHELIKS 394
S + S+ I G ++D+ ++ L A + +
Sbjct: 912 SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDN 971
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
M N W +L++G + A +LNQ+
Sbjct: 972 MKNR-NIFAWNSLVSGYSFKGMFEDALRLLNQM 1003
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 26/230 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG------------------------FLPTNFTFPFV 36
++ G+ F+ A+ N M EG F+P + + +
Sbjct: 983 LVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCL 1042
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
L+ACA Q G H L ++ G D FV T+L+++Y L +A KVF I +K +
Sbjct: 1043 LRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTL 1102
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHG 155
SW +I G+ G +EAI++F + G+ PD+ + +L+AC G + K+
Sbjct: 1103 ASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDS 1162
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK-DIVSWSSMI 204
+ + + +VDL + G +++A + MP K D W +++
Sbjct: 1163 MITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALL 1212
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/603 (36%), Positives = 353/603 (58%), Gaps = 1/603 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G SN AIE + M +G + T VL ACA+ + G H VK G
Sbjct: 489 VISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTG 548
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + + +LL++Y +C ++F + KNVVSWTA+I+ Y+ G ++ + +
Sbjct: 549 LIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQ 608
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++PD F++ L A L K +HGY G + + VA +L+++Y KC
Sbjct: 609 EMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCR 668
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+E+AR +FD++ KD++SW+++I GY+ N FP E+ +F +M + +P TM +L
Sbjct: 669 NVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILP 727
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A AS+ +LE G ++ R FL + L+DMY KCG + A +F + K+ +
Sbjct: 728 AAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLIS 787
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G M+G+ K A +F Q+ GI+P+ +F +L C H+GL EGR+FF +M
Sbjct: 788 WTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQ 847
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + P ++HY C+VDLL R+G L EA E I+SMP+EP++ +W +LL GCR+HK LA
Sbjct: 848 KEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLA 907
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V +++ LEP N+G YVLL+NIY+ + +W K+++ +G +G+++ G SW+EV
Sbjct: 908 EKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSK 967
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F+ + +HP +I LD++A +++ G P + L ++ L HS KL
Sbjct: 968 VHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKL 1027
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFG++ IR+ KN +VC CHEA K ISK+ REII+RD++RFH F G CSC
Sbjct: 1028 AVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSC 1087
Query: 601 KDF 603
+ +
Sbjct: 1088 RGY 1090
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 206/406 (50%), Gaps = 37/406 (9%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN-----LYVHCGYLADALK 86
++ V++ C E + R+H+LI +A K S+L Y+ CG L +A
Sbjct: 99 SYCMVVQLCGEERSLEAAKRAHALI-RASSAAATGGKGSVLGKRLVLAYLKCGDLGEART 157
Query: 87 VFDDIPDK--NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
VFD +P + +V WT+++S Y G+ +EA+++FR++ G+ PD+ ++ VL + L
Sbjct: 158 VFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSL 217
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
G L+ + IHG + + G G+ VA +L+ +Y++CG ME A RVFD M +D +SW+SMI
Sbjct: 218 GSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMI 277
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G SNG+ A+D+F M + + T++ VL ACA LG +G + ++ L
Sbjct: 278 GGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLL 337
Query: 265 ----------SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV-VWNAVVSGLSMNGY 313
+ LG+ L+ MY KCG MA A +VF M K V VWN ++ G + G
Sbjct: 338 WGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGE 397
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLL-----CGCTHAGLVDEG---RQFFNSMSRVFSL 365
+ + +F Q+ + GI P+ + LL C GLV G + F + V +
Sbjct: 398 FEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCN- 456
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
++ +S + +A + MP + + I W ++++GC
Sbjct: 457 --------ALISFYAKSNMIGDAVLVFNRMPRQ-DTISWNSVISGC 493
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 200/422 (47%), Gaps = 19/422 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLK-----ACAREHDFQLGVRSHSL 55
++ G+ F+ ++ + M G P +LK +CAR+ G+ +H
Sbjct: 388 IMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARD-----GLVAHGY 442
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
IVK G V +L++ Y + DA+ VF+ +P ++ +SW ++ISG + G EA
Sbjct: 443 IVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEA 502
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
I +F R+ +G + DS +++ VL AC Q + +HGY + G +A +L+D+
Sbjct: 503 IELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDM 562
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y+ C + + ++F M +K++VSW++MI Y G + + M + ++P+ + +
Sbjct: 563 YSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAV 622
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
L A A +L+ G + RN + L++MY KC + +A +F + +
Sbjct: 623 TSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTN 682
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
KD + WN ++ G S N + +F +F + +PN T +L ++ GR+
Sbjct: 683 KDVISWNTLIGGYSRNNFPNESFSLFSDM-LLQFRPNAVTMTCILPAAASISSLERGREI 741
Query: 356 FN-SMSRVFSLTPMIEHYG--CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
++ R F + + Y +VD+ + G L A L + + N I W ++AG
Sbjct: 742 HAYALRRGF----LEDSYASNALVDMYVKCGALLVARVLFDRL-TKKNLISWTIMIAGYG 796
Query: 413 LH 414
+H
Sbjct: 797 MH 798
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 189/409 (46%), Gaps = 13/409 (3%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
FQ A+ + M+ G P VLK + G H L+ K GL V +
Sbjct: 185 FQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANA 244
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ +Y CG + DA +VFD + ++ +SW ++I G + G A+++F ++ +G +
Sbjct: 245 LIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEIS 304
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAG---------KG-RNVFVATSLVDLYAKCG 180
S +++ VL AC LG K +HGY ++G G + + + LV +Y KCG
Sbjct: 305 SVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCG 364
Query: 181 NMEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+M ARRVFD M K ++ W+ ++ GYA G +E+L +F M + P+ + + +L
Sbjct: 365 DMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLL 424
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
L G+ A ++ + F + + LI YAK + A VF M +D +
Sbjct: 425 KCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTI 484
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN+V+SG S NG A +F ++ G + + T + +L C + GR +
Sbjct: 485 SWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGR-VVHGY 543
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
S L ++D+ +++ +SM + N + W A++
Sbjct: 544 SVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMG-QKNVVSWTAMI 591
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 166/343 (48%), Gaps = 11/343 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G SN A++ ++ M ++G ++ T VL ACA +G H VK+G
Sbjct: 276 MIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSG 335
Query: 61 L----DC------DEFVKTSLLNLYVHCGYLADALKVFDDIPDK-NVVSWTAIISGYINE 109
L D D + + L+ +YV CG +A A +VFD + K NV W I+ GY
Sbjct: 336 LLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKV 395
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
G EE++++F ++ G+ PD +I +L T L HGY+ + G G V
Sbjct: 396 GEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVC 455
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
+L+ YAK + A VF++MP +D +SW+S+I G +SNG EA+++F M + +
Sbjct: 456 NALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQE 515
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
+ T++ VL ACA G + + + L L+DMY+ C ++
Sbjct: 516 LDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQI 575
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
FR M K+ V W A+++ G G+ ++ GI+P+
Sbjct: 576 FRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPD 618
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/595 (37%), Positives = 359/595 (60%), Gaps = 2/595 (0%)
Query: 11 FQHAIEFYNSMR-NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKT 69
+ A+E + + N + + T+ ++ AC + + + ++ +GLD DE+++
Sbjct: 111 YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN 170
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
+L ++V CG + DA ++FD++P+KN++SW II G ++ G+ EA +F +
Sbjct: 171 RVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDA 230
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
S V ++ A LG + + +H + G G +VFVA +L+D+Y+KCG++E A+ VF
Sbjct: 231 GSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVF 290
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
DQMPEK V W+S+I GYA +G+ +EAL M+Y M+ +K + +T ++ CA L +LE
Sbjct: 291 DQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLE 350
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
A + + R+ F + V T L+D+Y+K GR+ A VF M K+ + WNA+++G
Sbjct: 351 HAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYG 410
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G A +F ++ G+ PN TF+ +L C+++GL D G + F SMSR + P
Sbjct: 411 NHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRA 470
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
HY CM++LLGR G LDEA LIK P +P +W ALL CR+HK +L + +L
Sbjct: 471 MHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
+ P NYV+L NIY+ S + +AA + + +G++ + CSW+E+ + F+ GD
Sbjct: 531 MGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDK 590
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
H S++IY KLDEL ++ G+VP +L D++E+E++ L HSEKLA+AFGLI T
Sbjct: 591 CHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQEERVLLY-HSEKLAIAFGLINT 649
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ ++I ++ R+CGDCH AIKLI+ +T REI+VRD +RFH F +GSCSC D+W
Sbjct: 650 SDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 141/298 (47%), Gaps = 38/298 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + + A+ Y MR+ G NFTF +++ CAR + ++H+ +V+ G
Sbjct: 304 IIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHG 363
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D T+L++LY G + DA VFD +P KNV+SW A+I+GY N G EA+ MF
Sbjct: 364 FGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFE 423
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+LH G+ P+ + + VL+AC+ Y + +G +F + S
Sbjct: 424 RMLHEGMVPNHVTFLAVLSACS-------------YSGLSDRGWEIFESMSR-------- 462
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
D + + ++ MI+ G EA F ++ KP +L+
Sbjct: 463 ---------DHKIKPRAMHYACMIELLGREGLLDEA---FALIKDAPFKPTVNMWAALLT 510
Query: 241 ACASLGALELGVWASS--FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
AC ELG +A+ + E LSN V+ L+++Y GR+ +A V + +K +
Sbjct: 511 ACRVHKNFELGKFAAEKLYGMGPEKLSNYVV---LLNIYNXSGRLEEAAAVIQTLKRR 565
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/566 (39%), Positives = 330/566 (58%), Gaps = 32/566 (5%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
+L+ Y+ G + +A ++FD +P +N +SW +I+GY G EEA+ + + L G+ P
Sbjct: 358 ALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLP 417
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
S+ + AC+ + L T +H + G N F +L+ +Y KC NME AR+VF
Sbjct: 418 SLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVF 477
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLK------------------- 229
+M KDIVSW+S + N EA + F NM R+++
Sbjct: 478 SRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMG 537
Query: 230 -----------PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
P + +L C SLGA ++G + + S ++ LI MY
Sbjct: 538 AFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYF 597
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
KCG A + ++F M+++D WN +++G + +G + A ++ +E G+ PN TFVG
Sbjct: 598 KCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVG 656
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
LL C+HAGLVDEG +FF SMS+ + LTP+ EHY CMVDLLGR+G + A + I MP+E
Sbjct: 657 LLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIE 716
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIR 458
P+ ++W ALL C++HK ++ + +L +EP N+GNYV+LSNIYS+ W + A++R
Sbjct: 717 PDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVR 776
Query: 459 SMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTD 518
+M +G+ K GCSW ++ +H F+ GD H E+I + L+EL T LKA G+VP T+
Sbjct: 777 KIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTE 836
Query: 519 HVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKIT 578
VL DI+EE+K+ L HSEKLA+A+ L+ T I+I KNLR+CGDCH IK +S +T
Sbjct: 837 FVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVT 896
Query: 579 GREIIVRDNNRFHCFIEGSCSCKDFW 604
R+I +RD NRFH F GSCSC+DFW
Sbjct: 897 KRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 185/412 (44%), Gaps = 15/412 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A + + M EG LP F L A + + L +K G
Sbjct: 195 MISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTG 254
Query: 61 LDCDEFVKTSLLNLYVH-CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ D + T++LN+Y L A+K F+ + ++N +W+ +I+ + G ++ AI ++
Sbjct: 255 FERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY 314
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R + + + ++T Q G + A+ + + E V +L+ Y +
Sbjct: 315 ERDPVKSIACRT----ALITGLAQCGRIDDARILFEQIPEP----IVVSWNALITGYMQN 366
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + +A+ +FD+MP ++ +SW+ MI GYA NG +EAL + + R + P ++ +
Sbjct: 367 GMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIF 426
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+++ ALE G S + N LI MY KC M A +VF M KD V
Sbjct: 427 FACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIV 486
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN+ ++ L N + A F + + + ++ ++ HA +E F +M
Sbjct: 487 SWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Query: 360 SRVFSL--TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
L +P++ + LG S + H + + M+ IV AL++
Sbjct: 543 FCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALIS 594
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 176/377 (46%), Gaps = 42/377 (11%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF------------------- 119
G + +A +VFD +P +++++W ++IS Y + G + A +++
Sbjct: 48 GRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYG 107
Query: 120 --------RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
RR+ L+ ++ + +++ Q GD++ A+ + +A R+V S
Sbjct: 108 RLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLF----DAMPSRDVSSWNS 163
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
++ Y M AR +F++MPE+++VSW+ MI GY +A D+F M RE L P+
Sbjct: 164 MLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPD 223
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK-CGRMAQACKVF 290
LSA LG L++ + F + V+GT ++++Y++ + A K F
Sbjct: 224 QSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFF 283
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M ++++ W+ +++ LS G + A V+ + I L+ G G +D
Sbjct: 284 ESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACR----TALITGLAQCGRID 339
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ R F + P++ + ++ ++G ++EA EL MP N I W ++AG
Sbjct: 340 DARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAG 393
Query: 411 CRLHKKTDLAEHVLNQL 427
+ +++ A +L +L
Sbjct: 394 YAQNGRSEEALGLLQEL 410
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 192/390 (49%), Gaps = 22/390 (5%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
S+L Y H + DA +F+ +P++N+VSWT +ISGY N +A ++F ++ GL P
Sbjct: 163 SMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLP 222
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK-CGNMEKARRV 188
D + L+A LG+L + + + G R+V + T+++++Y++ ++ A +
Sbjct: 223 DQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKF 282
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F+ M E++ +WS+MI + G A+ ++ +R+ +K +++ A G +
Sbjct: 283 FESMIERNEYTWSTMIAALSHGGRIDAAIAVY---ERDPVK-SIACRTALITGLAQCGRI 338
Query: 249 ELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
+ A E+ + P++ + LI Y + G + +A ++F +M ++ + W +++
Sbjct: 339 DD---ARILFEQ---IPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G + NG + A G+ +L + G+ P+ ++ + C++ ++ G Q S +
Sbjct: 393 GYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH---SLAVKVG 449
Query: 367 PMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ C ++ + G+ ++ A ++ M + + + W + LA + D A +
Sbjct: 450 CQFNSFACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQNDLLDEARNTF 508
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDA 454
+ +++ + ++ + + Y+ + + N+A
Sbjct: 509 DNMLSRD---DVSWTTIISAYAHAEQSNEA 535
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 103/206 (50%), Gaps = 3/206 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + + A+ + +M E LP + +L C ++G + H++ +K G
Sbjct: 522 IISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLG 581
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D + V +L+++Y CG AD+ ++FD + ++++ +W II+GY G EAI M++
Sbjct: 582 MDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQ 640
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ P+ + V +L AC+ G + K+ + G +VDL +
Sbjct: 641 HMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRT 700
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G+++ A + MP E D V WS+++
Sbjct: 701 GDVQGAEQFIYDMPIEPDTVIWSALL 726
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 45/199 (22%)
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+ G + +AR VFD MP +DI++W+SMI Y NG P A D++ + N++
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRT------ 98
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
G L+ Y + GR+ +A +VF M ++
Sbjct: 99 ---------------------------------GAILLSGYGRLGRVLEARRVFDGMLER 125
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ V WNA++S NG + +A +F + + +++ +L G H+ + + R F
Sbjct: 126 NTVAWNAMISCYVQNGDITMARRLFDAMPSRDV----SSWNSMLTGYCHSLQMVDARNLF 181
Query: 357 NSMSR--VFSLTPMIEHYG 373
M + S T MI YG
Sbjct: 182 EKMPERNLVSWTVMISGYG 200
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/604 (36%), Positives = 350/604 (57%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + D + + + M G P FT+P +L+ C + LG + HSL +K G
Sbjct: 316 MLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNG 375
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V L+++Y G+L A ++ D I +K+VVSWT++I+GY+ +EA+ F+
Sbjct: 376 FQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFK 435
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ PD+ + ++AC + + IH V +G +V + LV LYA+CG
Sbjct: 436 EMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCG 495
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++A F+ + K+ ++W+ +I G+A +G +EAL +F M + K +T V +S
Sbjct: 496 ISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSIS 555
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A+L ++ G + + + + S + LI +Y KCG + A F EM +++V
Sbjct: 556 ASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVS 615
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++ S +G A +F Q+++ G++P+ TFVG+L C+H GLV+EG +F SMS
Sbjct: 616 WNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMS 675
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P +HY C+VD+LGR+GQLD A ++ MP+ +++VW LL+ C++HK ++
Sbjct: 676 NEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIG 735
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E L+ LEP +S +YVLLSN Y+ + KW +IR +M D+G++K G SW+EV V
Sbjct: 736 EFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNV 795
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F VGD HPL+++IY+ L L +L G+ H+ + E+E K HSEKL
Sbjct: 796 VHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKL 855
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGL++ +R+ KNLRVC DCH +K S + GREI++RD RFH F GSCSC
Sbjct: 856 AVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSC 915
Query: 601 KDFW 604
D+W
Sbjct: 916 GDYW 919
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 205/410 (50%), Gaps = 2/410 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N + A+ Y M G +PT + +L AC + FQLG H + K G
Sbjct: 114 VLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQG 173
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +L++LY+ C A +VF D+ + V++ +ISG+ G+ + A+ +F
Sbjct: 174 FFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFD 233
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GL PDS +I +L AC+ +GDL K +H Y+ +AG + + SL+DLY K G
Sbjct: 234 EMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSG 293
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E+A ++FD ++V W+ M+ Y ++ D+FY M ++P +T +L
Sbjct: 294 DIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLR 353
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C G + LG S +N F S+ + LIDMY+K G + +A ++ +++KD V
Sbjct: 354 TCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVS 413
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++++G + + K A F +++ CGI P+ + C V +G Q ++
Sbjct: 414 WTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQ-IHARV 472
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
V + + + +V L R G EA +++ I W L++G
Sbjct: 473 YVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIE-HKEGITWNGLISG 521
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 213/433 (49%), Gaps = 3/433 (0%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKAC-AREHDFQLGVRSHSLIVKAG 60
+ GF++ D + + + + + + F L+AC + L H+ + G
Sbjct: 13 LAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHAKAIICG 72
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + L++LY G++ A +VF+++ ++ VSW A++SGY G EEA+ ++R
Sbjct: 73 LSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYR 132
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ P + + +L+ACT+ + IH V + G FV +L+ LY +C
Sbjct: 133 EMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCR 192
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A RVF M D V+++++I G+A G AL +F MQ L P+ T+ +L+
Sbjct: 193 SFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLA 252
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+++G L G S++ + + ++ +L+D+Y K G + +A ++F + V+
Sbjct: 253 ACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVL 312
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN ++ + +F +F ++ G++PN T+ +L CTH G + G Q +S++
Sbjct: 313 WNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQ-IHSLT 371
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ G ++D+ + G LD+A ++ M E + + W +++AG H+ A
Sbjct: 372 IKNGFQSDMYVSGVLIDMYSKYGWLDKAQRIL-DMIEEKDVVSWTSMIAGYVQHEFCKEA 430
Query: 421 EHVLNQLIALEPW 433
++ A W
Sbjct: 431 LETFKEMQACGIW 443
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/583 (38%), Positives = 355/583 (60%), Gaps = 11/583 (1%)
Query: 31 FTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDD 90
FT V+ AC D L + H +V G DC V ++L Y G+L++A +VF +
Sbjct: 142 FTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFRE 199
Query: 91 IPD---KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
+ + ++ VSW A+I EA+ +FR ++ RGLK D F++ VLTA T + DL
Sbjct: 200 MGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDL 259
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKC-GNMEKARRVFDQMPEKDIVSWSSMIQG 206
+ HG + ++G N V + L+DLY+KC G+M + R+VF+++ D+V W++MI G
Sbjct: 260 VGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISG 319
Query: 207 YA-SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
++ ++ L F MQR +P+ + V V SAC++L + LG + +++
Sbjct: 320 FSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPY 379
Query: 266 NPV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
N V + L+ MY+KCG + A +VF M + + V N++++G + +G + +F +
Sbjct: 380 NRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELM 439
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ I PN TF+ +L C H G V+EG+++FN M F + P EHY CM+DLLGR+G+
Sbjct: 440 LEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGK 499
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
L EA +I++MP P +I W LL CR H +LA N+ + LEP+N+ YV+LSN+
Sbjct: 500 LKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNM 559
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+++ +W +AA ++ +M ++G++K GCSW+E+D VH F+ D SHP+ ++I+ + ++
Sbjct: 560 YASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKM 619
Query: 505 ATKLKAAGFVPTTDHVLF---DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
K+K AG+VP L ++E +E++ L HSEKLA+AFGLI+T I + KNL
Sbjct: 620 LKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNL 679
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+CGDCH A+KLIS +TGREI VRD +RFHCF EG CSC+D+W
Sbjct: 680 RICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 214/473 (45%), Gaps = 46/473 (9%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA------- 84
TF +LKAC + D G H+L K+ + ++ LY CG L +A
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70
Query: 85 ------------------------LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+VFD+IP ++VS+ +I+ Y + G + +F
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ L D F++ V+TAC D+ + +H +V G V +++ Y++ G
Sbjct: 131 EVRELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKG 188
Query: 181 NMEKARRVFDQMPE---KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
+ +ARRVF +M E +D VSW++MI + EA+ +F M R LK + +TM
Sbjct: 189 FLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMAS 248
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC-GRMAQACKVFREMKDK 296
VL+A + L G M ++ F N +G+ LID+Y+KC G M + KVF E+
Sbjct: 249 VLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAP 308
Query: 297 DQVVWNAVVSGLSM-NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
D V+WN ++SG S+ + F ++++ G +P+ +FV + C++ G+Q
Sbjct: 309 DLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQV 368
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH- 414
+ + +V + + G + +A + +MP E N + +++AG H
Sbjct: 369 HALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP-EHNTVSLNSMIAGYAQHG 427
Query: 415 ---KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
+ L E +L + IA NS ++ + + + K + K +MM ++
Sbjct: 428 VEVESLRLFELMLEKDIAP---NSITFIAVLSACVHTGKVEEGQKYFNMMKER 477
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 137/302 (45%), Gaps = 44/302 (14%)
Query: 1 MIRGF-VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI GF + D + + + M+ GF P + +F V AC+ LG + H+L +K+
Sbjct: 316 MISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKS 375
Query: 60 GLDCDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+ + V +L+ +Y CG + DA +VFD +P+ N VS ++I+GY G E++ +
Sbjct: 376 DVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRL 435
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F +L + + P+S + + VL+AC G + +G+ F
Sbjct: 436 FELMLEKDIAPNSITFIAVLSACVHTGKVE-------------EGQKYF----------- 471
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
NM K R F PE + +S MI G KEA + M E+ T++G
Sbjct: 472 --NMMKER--FCIEPEAE--HYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLG- 524
Query: 239 LSACASLGALELGVWASSFMERNEFLS----NPVLGTTLIDMYAKCGRMAQACKVFREMK 294
AC G +EL V A+ NEFL N L +MYA R +A V R M+
Sbjct: 525 --ACRKHGNVELAVKAA-----NEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMR 577
Query: 295 DK 296
++
Sbjct: 578 ER 579
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/575 (38%), Positives = 341/575 (59%), Gaps = 2/575 (0%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ +LK CA G R HS +VK G D + L+ +Y CG +A+A VFD I
Sbjct: 26 TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85
Query: 92 PDKN--VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+KN V+SW II Y G +EA+++F+ + G+ + +++ + AC L
Sbjct: 86 QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H + + V TSLV+++ KC N++ AR VFD +P K++V+W++M+ Y+
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQ 205
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
N K+A+ +F M E ++P+ T + ++ ACA+L A G + + + L
Sbjct: 206 NWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVAL 265
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
GT ++ Y KCGR+ A +F + K+ V W+A+++ + NGY A ++ ++ + G+
Sbjct: 266 GTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGL 325
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+ NG TF+GLL C+HAG +G +F SM R F + P+ EHY ++DLLGRSGQL +
Sbjct: 326 EVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSE 385
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+LI SMP EP++ W ALL CR+H D + + L+P +SG Y+LLSN+YS++
Sbjct: 386 DLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTG 445
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
+ ++A + R M +GI K G S +EV VHEF+ HP +I+++++ L ++K
Sbjct: 446 RMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVK 505
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
AG+V VL D+EEEEK+ L HSE+LA+AFGLI+T P + I KNLRVC DCH
Sbjct: 506 EAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHA 565
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A+K ISK+ GR+I+VRD RFH F G+CSC D+W
Sbjct: 566 AVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 182/362 (50%), Gaps = 5/362 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + N + A+ + +M EG + T + ACA + G H++ V
Sbjct: 98 IIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKR 157
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D V TSL+N++ C + A VFD +P KN+V+W +++ Y ++AI +FR
Sbjct: 158 LESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFR 217
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++PD+ + + ++ AC L + + +H + +G +V + T+++ Y KCG
Sbjct: 218 FMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCG 277
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR +FD + +K+ V+WS+++ YA NG+ EA+++++ M + L+ T +G+L
Sbjct: 278 RLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLF 337
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G GV M R+ F PV LID+ + G++ + + M + D
Sbjct: 338 ACSHAGRSMDGVDYFVSMIRD-FGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPD 396
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
W A++ M+G V + + + + +G ++ L + G +DE R+
Sbjct: 397 SSAWLALLGACRMHGDVDRGARIAELIYELDPEDSG-PYILLSNLYSSTGRMDEARRTRK 455
Query: 358 SM 359
+M
Sbjct: 456 AM 457
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
N + + E T V +L CA AL G S + ++ + S+ ++ LI+MY KCG
Sbjct: 14 NRTVDERREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCG 73
Query: 282 RMAQACKVFREMKDK--DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
+A+A VF ++++K D + WN ++ + NG K A +F ++ G+ N T +
Sbjct: 74 GIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINA 133
Query: 340 LCGCTHAGLVDEGRQFFN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
+ C +EGR ++ + M+ +V++ G+ +D A + S+P
Sbjct: 134 IDACASLPSEEEGRIVHAIAVDKRLESDTMVG--TSLVNMFGKCKNVDAARAVFDSLP-R 190
Query: 399 PNAIVWGALLA 409
N + W ++A
Sbjct: 191 KNLVTWNNMVA 201
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/542 (42%), Positives = 337/542 (62%), Gaps = 15/542 (2%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL- 122
D F +L YV L A +F+ +P++++VSW A++SGY G ++EA +F ++
Sbjct: 25 DLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMP 84
Query: 123 LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
L G+ + +L A Q G + AK + E+ + L+ G +
Sbjct: 85 LKNGISWNG-----LLAAYVQNGRIEDAKRLF----ESKMDWTLVSWNCLMG-----GFV 130
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
K R +FD MP++D +SWS+MI GY+ NG +EAL F MQR+ + + LS C
Sbjct: 131 RKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTC 190
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
+++ ALELG + + + + +G L+ MY KCG + +A F+E+ +KD V WN
Sbjct: 191 SNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWN 250
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
++ G + +G+ + A VF ++ GI+P+ T V +L C+HAGLVD+G ++F SM+R
Sbjct: 251 TMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRD 310
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ +T + HY CMVDLLGR+GQL+EA L+K+MP EP+A WGALL R+H T+L E
Sbjct: 311 YGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEK 370
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
+ +EP NSG Y+LLS +Y+AS +W+DA K+R M +KG++K+ G SW+EV +H
Sbjct: 371 AAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIH 430
Query: 483 EFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
F VGD SHP ++KIY+ L+E+ KLK G++ +T+ V D+EEEEK + L HSEKLA+
Sbjct: 431 TFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAV 490
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
A+G++ IR+ KNLRVC DCH AIK ISKI GR II+RDN+RFH F GSCSC+D
Sbjct: 491 AYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRD 550
Query: 603 FW 604
FW
Sbjct: 551 FW 552
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 5/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N C + A+ F+ M+ + +F L C+ +LG + H +VKAG
Sbjct: 151 MIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAG 210
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+V +LL +Y CG + +A F +I +K+VVSW +I GY G EEA+ +F
Sbjct: 211 YQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFE 270
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLST-AKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G++PD ++V VL AC+ G + +++ + + G + T +VDL +
Sbjct: 271 LMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRA 330
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
G +E+A+ + MP E D +W +++ +G ++A + + M+ N
Sbjct: 331 GQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHN 382
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 124/252 (49%), Gaps = 17/252 (6%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
R++F ++ Y + +++ AR +F++MPE+DIVSW++M+ GYA NGF EA ++FY M
Sbjct: 24 RDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKM 83
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
+N + G+L+A G +E + L + TL+ G
Sbjct: 84 PLKN----GISWNGLLAAYVQNGRIEDA----------KRLFESKMDWTLVSWNCLMGGF 129
Query: 284 AQACK-VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ + +F M +D + W+A+++G S NG + A F ++++ + N ++F L
Sbjct: 130 VRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALST 189
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
C++ ++ GRQ + + T ++ + + G +DEA + + + +E + +
Sbjct: 190 CSNIAALELGRQLHCRLVKAGYQTGWYVG-NALLAMYCKCGSIDEARDAFQEI-LEKDVV 247
Query: 403 VWGALLAGCRLH 414
W ++ G H
Sbjct: 248 SWNTMIHGYARH 259
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/566 (39%), Positives = 330/566 (58%), Gaps = 32/566 (5%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
+L+ Y+ G + +A ++FD +P +N +SW +I+GY G EEA+ + + L G+ P
Sbjct: 358 ALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLP 417
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
S+ + AC+ + L T +H + G N F +L+ +Y KC NME AR+VF
Sbjct: 418 SLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVF 477
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLK------------------- 229
+M KDIVSW+S + N EA + F NM R+++
Sbjct: 478 SRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMG 537
Query: 230 -----------PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
P + +L C SLGA ++G + + S ++ LI MY
Sbjct: 538 AFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYF 597
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
KCG A + ++F M+++D WN +++G + +G + A ++ +E G+ PN TFVG
Sbjct: 598 KCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVG 656
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
LL C+HAGLVDEG +FF SMS+ + LTP+ EHY CMVDLLGR+G + A + I MP+E
Sbjct: 657 LLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIE 716
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIR 458
P+ ++W ALL C++HK ++ + +L +EP N+GNYV+LSNIYS+ W + A++R
Sbjct: 717 PDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVR 776
Query: 459 SMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTD 518
+M +G+ K GCSW ++ +H F+ GD H E+I + L+EL T LKA G+VP T+
Sbjct: 777 KIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTE 836
Query: 519 HVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKIT 578
VL DI+EE+K+ L HSEKLA+A+ L+ T I+I KNLR+CGDCH IK +S +T
Sbjct: 837 FVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVT 896
Query: 579 GREIIVRDNNRFHCFIEGSCSCKDFW 604
R+I +RD NRFH F GSCSC+DFW
Sbjct: 897 KRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 185/412 (44%), Gaps = 15/412 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A + + M EG LP F L A + + L +K G
Sbjct: 195 MISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTG 254
Query: 61 LDCDEFVKTSLLNLYVH-CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ D + T++LN+Y L A+K F+ + ++N +W+ +I+ + G ++ AI ++
Sbjct: 255 FERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY 314
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R + + + ++T Q G + A+ + + E V +L+ Y +
Sbjct: 315 ERDPVKSIACRT----ALITGLAQCGRIDDARILFEQIPEP----IVVSWNALITGYMQN 366
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + +A+ +FD+MP ++ +SW+ MI GYA NG +EAL + + R + P ++ +
Sbjct: 367 GMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIF 426
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+++ ALE G S + N LI MY KC M A +VF M KD V
Sbjct: 427 FACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIV 486
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN+ ++ L N + A F + + + ++ ++ HA +E F +M
Sbjct: 487 SWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Query: 360 SRVFSL--TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
L +P++ + LG S + H + + M+ IV AL++
Sbjct: 543 FCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALIS 594
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 176/377 (46%), Gaps = 42/377 (11%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF------------------- 119
G + +A +VFD +P +++++W ++IS Y + G + A +++
Sbjct: 48 GRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYG 107
Query: 120 --------RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
RR+ L+ ++ + +++ Q GD++ A+ + +A R+V S
Sbjct: 108 RLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLF----DAMPSRDVSSWNS 163
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
++ Y M AR +F++MPE+++VSW+ MI GY +A D+F M RE L P+
Sbjct: 164 MLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPD 223
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK-CGRMAQACKVF 290
LSA LG L++ + F + V+GT ++++Y++ + A K F
Sbjct: 224 QSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFF 283
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M ++++ W+ +++ LS G + A V+ + I L+ G G +D
Sbjct: 284 ESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACR----TALITGLAQCGRID 339
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ R F + P++ + ++ ++G ++EA EL MP N I W ++AG
Sbjct: 340 DARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAG 393
Query: 411 CRLHKKTDLAEHVLNQL 427
+ +++ A +L +L
Sbjct: 394 YAQNGRSEEALGLLQEL 410
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 192/390 (49%), Gaps = 22/390 (5%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
S+L Y H + DA +F+ +P++N+VSWT +ISGY N +A ++F ++ GL P
Sbjct: 163 SMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLP 222
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK-CGNMEKARRV 188
D + L+A LG+L + + + G R+V + T+++++Y++ ++ A +
Sbjct: 223 DQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKF 282
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F+ M E++ +WS+MI + G A+ ++ +R+ +K +++ A G +
Sbjct: 283 FESMIERNEYTWSTMIAALSHGGRIDAAIAVY---ERDPVK-SIACRTALITGLAQCGRI 338
Query: 249 ELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
+ A E+ + P++ + LI Y + G + +A ++F +M ++ + W +++
Sbjct: 339 DD---ARILFEQ---IPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G + NG + A G+ +L + G+ P+ ++ + C++ ++ G Q S +
Sbjct: 393 GYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH---SLAVKVG 449
Query: 367 PMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ C ++ + G+ ++ A ++ M + + + W + LA + D A +
Sbjct: 450 CQFNSFACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQNDLLDEARNTF 508
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDA 454
+ +++ + ++ + + Y+ + + N+A
Sbjct: 509 DNMLSRD---DVSWTTIISAYAHAEQSNEA 535
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 103/206 (50%), Gaps = 3/206 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + + A+ + +M E LP + +L C ++G + H++ +K G
Sbjct: 522 IISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLG 581
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D + V +L+++Y CG AD+ ++FD + ++++ +W II+GY G EAI M++
Sbjct: 582 MDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQ 640
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ P+ + V +L AC+ G + K+ + G +VDL +
Sbjct: 641 HMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRT 700
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G+++ A + MP E D V WS+++
Sbjct: 701 GDVQGAEQFIYDMPIEPDTVIWSALL 726
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 45/199 (22%)
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+ G + +AR VFD MP +DI++W+SMI Y NG P A D++ + N++
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRT------ 98
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
G L+ Y + GR+ +A +VF M ++
Sbjct: 99 ---------------------------------GAILLSGYGRLGRVLEARRVFDGMLER 125
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ V WNA++S NG + +A +F + + +++ +L G H+ + + R F
Sbjct: 126 NTVAWNAMISCYVQNGDITMARRLFDAMPSRDV----SSWNSMLTGYCHSLQMVDARNLF 181
Query: 357 NSMSR--VFSLTPMIEHYG 373
M + S T MI YG
Sbjct: 182 EKMPERNLVSWTVMISGYG 200
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/588 (41%), Positives = 347/588 (59%), Gaps = 14/588 (2%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLI-VKAGLDCDEFVKTSLLNLYVHCGYLADALK 86
PT TF L AC+ D Q G H+ I G+ + T++ ++Y CG L+ A
Sbjct: 137 PTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKS 196
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLE-EAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
VFD IP KNVVSW A+I+ Y G+ +A+++F ++ G++P + V VL AC
Sbjct: 197 VFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACN--- 253
Query: 146 DLSTAKWIHGYVNEAG---KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
D+++ + IH + E G R+V V +L+++YAKCG++E AR +F +M +D VS +
Sbjct: 254 DVTSLEKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNV 313
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW-----ASSF 257
MI +A G KE++ +F M E L + T V++AC+ GALE G
Sbjct: 314 MIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPV 373
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ R L N V+ T L+ MY KCG + QA VF+ M K+ V WNA+++ + G A
Sbjct: 374 LGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEA 433
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
G++ + +F+ +L C+H+G+++ F M F L P E+Y CMVD
Sbjct: 434 AAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVD 493
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGN 437
LL RSG+L +A EL+ SMP P+AI W LL GCR+ + A Q LEP N+
Sbjct: 494 LLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAP 553
Query: 438 YVLLSNIYSASHKWNDAAKIRSMMGDKGIQK-IRGCSWVEVDGVVHEFLVGDNSHPLSEK 496
Y LLS++YSA+ K ++ ++RS M ++G++K + G S +EV G VHEF+ GD+SHP +K
Sbjct: 554 YTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDK 613
Query: 497 IYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIR 556
I +LD L +LK AGFVP+TD V+ D++ E+K+ LA HSEKLA+AFGLI+T +
Sbjct: 614 ILRELDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLL 673
Query: 557 IAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ KNLRVC DCH AIKLISK+ R I VRD NRFH F G+CSC D+W
Sbjct: 674 VLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 207/392 (52%), Gaps = 25/392 (6%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
+F +++C + + H I +AGL ++ L+ + G L +A +FD I
Sbjct: 46 SFAAAIRSCKDSNSVSI---IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAI 102
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
KN+ SW IIS Y + G+ A+++F ++ + P + + L+AC+ LGDL +
Sbjct: 103 QHKNIFSWNIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGR 159
Query: 152 WIHGYVNEA-GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
IH + + G +V + T++ +YAKCG++ A+ VFD++P K++VSW+++I YA +
Sbjct: 160 EIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQS 219
Query: 211 GFP-KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV- 268
G +ALD+F M ++P T VGVL AC + +LE + A +F V
Sbjct: 220 GHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLE-KIHARIVETGLQFDVRDVG 278
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ L++MYAKCG + A +FR+M+ +DQV N +++ + G K + VF +++ G
Sbjct: 279 VQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEG 338
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC---------MVDLL 379
+ + TF ++ C+ G ++ G++ + + P++ C +V +
Sbjct: 339 LPQDDTTFASVITACSCCGALEFGKRIHKRV-----VEPVLGRKCCLPNVVVETALVSMY 393
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G+ G L++A + K+M + N++ W A+LA C
Sbjct: 394 GKCGTLEQAKAVFKAMTTK-NSVSWNAMLAAC 424
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 127/243 (52%), Gaps = 18/243 (7%)
Query: 123 LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
L R ++ DSF+ A D ++ IH + AG G + ++ LV + AK G++
Sbjct: 38 LEREIQSDSFA-----AAIRSCKDSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSL 92
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
+AR +FD + K+I SW+ +I YA G P AL +F M ++ P T LSAC
Sbjct: 93 CEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSAC 149
Query: 243 ASLGALELGVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
+SLG L+ G + ++ + + V L T + MYAKCG ++ A VF + K+ V W
Sbjct: 150 SSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSW 209
Query: 302 NAVVSGLSMNGYV-KVAFGVFGQLEKCGIQPNGNTFVGLLCGCT--------HAGLVDEG 352
NA+++ + +G+ A +F ++ + G++P TFVG+L C HA +V+ G
Sbjct: 210 NALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLEKIHARIVETG 269
Query: 353 RQF 355
QF
Sbjct: 270 LQF 272
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 135/292 (46%), Gaps = 21/292 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA- 59
MI F + +I+ + M EG + TF V+ AC+ + G R H +V+
Sbjct: 314 MIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPV 373
Query: 60 -GLDC---DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
G C + V+T+L+++Y CG L A VF + KN VSW A+++ ++G +EA
Sbjct: 374 LGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEA 433
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA----KWIHGYVNEAGKGRNVFVATS 171
R G++ DS S + VL AC+ G L A + + + N
Sbjct: 434 AAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENY---RC 490
Query: 172 LVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGF---PKEALDMFYNMQREN 227
+VDL A+ G + A + + MP D ++W +++ G G A + +N++ +N
Sbjct: 491 MVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQN 550
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK 279
P YT++ L + A+ EL SS ER L V G ++I+++ +
Sbjct: 551 TAP--YTLLSSLYS-ATGKKDELVELRSSMKERG--LRKLVPGRSVIEVHGR 597
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/602 (36%), Positives = 360/602 (59%), Gaps = 14/602 (2%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ + M G T +L AC+ Q G HS I +G + + V +++
Sbjct: 231 ALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMT 290
Query: 74 LYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+Y CG + +A KVFD + + ++VVSW ++S Y++ ++AI +++R+ L+ D
Sbjct: 291 MYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM---QLRADK 347
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+ V +L+AC+ D+ + +H + +NV V +LV +YAKCG+ +AR VFD+
Sbjct: 348 VTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDK 407
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-------QRENLKPEYYTMVGVLSACAS 244
M ++ I+SW+++I Y EA +F M + +KP+ V +L+ACA
Sbjct: 408 MEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACAD 467
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV-VWNA 303
+ ALE G S S+ +GT ++++Y KCG + + ++F + + V +WNA
Sbjct: 468 VSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNA 527
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++ + G A +F ++E G++P+ +FV +L C+H GL D+G+ +F SM+ +
Sbjct: 528 MIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEY 587
Query: 364 -SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
++T I+H+GC+ DLLGR G+L EA E ++ +P++P+A+ W +LLA CR H+ A+
Sbjct: 588 RNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKE 647
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
V N+L+ LEP + YV LSNIY+ KW+ AK+R M ++G++K RG S +E+ +H
Sbjct: 648 VANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMH 707
Query: 483 EFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
+F GD++HP + +I +L +L +++K G+VP T VL ++E+EK+ L HSE+LA+
Sbjct: 708 DFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAI 767
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
A GLI+T +R+ KNLRVC DCH A KLISKI GR+I+VRD RFH F +G CSC+D
Sbjct: 768 ALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQD 827
Query: 603 FW 604
+W
Sbjct: 828 YW 829
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 214/419 (51%), Gaps = 14/419 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ F + + + MR +G P TF L +C + G+R H ++V +
Sbjct: 116 LVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSR 175
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
L+ D V +LLN+Y CG L+ A +VF + +NV+SW+ + + GN+ EA+ F
Sbjct: 176 LEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHF 235
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R +L G+K ++V +L+AC+ + + IH + +G + VA +++ +Y +C
Sbjct: 236 RFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRC 295
Query: 180 GNMEKARRVFDQMPE--KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
G +E+AR+VFD M E +D+VSW+ M+ Y N K+A+ ++ MQ L+ + T V
Sbjct: 296 GAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ---LRADKVTYVS 352
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+LSAC+S + LG + +E N ++G L+ MYAKCG +A VF +M+ +
Sbjct: 353 LLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRS 412
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQ---LEKCG----IQPNGNTFVGLLCGCTHAGLVD 350
+ W ++S V A +F Q LEK G ++P+ FV +L C ++
Sbjct: 413 IISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALE 472
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+G+ + + L+ +V+L G+ G+++E + + P+ +W A++A
Sbjct: 473 QGK-MVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIA 530
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 200/423 (47%), Gaps = 9/423 (2%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCG 79
+ + N T+ +L+ CAR G + HSL VK L + + ++++Y HC
Sbjct: 34 LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93
Query: 80 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
DA FD + +N+ SWT +++ + G +E + R+ G++PD+ + + L
Sbjct: 94 SPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALG 153
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE-KDIV 198
+C L IH V ++ + V+ +L+++Y KCG++ A+RVF +M ++++
Sbjct: 154 SCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVI 213
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
SWS M +A +G EAL F M +K MV +LSAC+S ++ G S +
Sbjct: 214 SWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCI 273
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD--KDQVVWNAVVSGLSMNGYVKV 316
+ F S ++ ++ MY +CG + +A KVF M + +D V WN ++S N K
Sbjct: 274 ALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKD 333
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A ++ +++ ++ + T+V LL C+ A V GR + L + +V
Sbjct: 334 AIQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVN-DELEKNVIVGNALV 389
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSG 436
+ + G EA + M + + I W +++ + A H+ Q++ LE S
Sbjct: 390 SMYAKCGSHTEARAVFDKME-QRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSS 448
Query: 437 NYV 439
V
Sbjct: 449 QRV 451
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/595 (37%), Positives = 359/595 (60%), Gaps = 2/595 (0%)
Query: 11 FQHAIEFYNSMR-NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKT 69
+ A+E + + N + + T+ ++ AC + + + ++ +GLD DE+++
Sbjct: 111 YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN 170
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
+L ++V CG + DA ++FD++P+KN++SW II G ++ G+ EA +F +
Sbjct: 171 RVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDA 230
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
S V ++ A LG + + +H + G G +VFVA +L+D+Y+KCG++E A+ VF
Sbjct: 231 GSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVF 290
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
DQMPEK V W+S+I GYA +G+ +EAL M+Y M+ +K + +T ++ CA L +LE
Sbjct: 291 DQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLE 350
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
A + + R+ F + V T L+D+Y+K GR+ A VF M K+ + WNA+++G
Sbjct: 351 HAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYG 410
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G A +F ++ G+ PN TF+ +L C+++GL D G + F SMSR + P
Sbjct: 411 NHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRA 470
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
HY CM++LLGR G LDEA LIK P +P +W ALL CR+HK +L + +L
Sbjct: 471 MHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
+ P NYV+L NIY+ S + +AA + + +G++ + CSW+E+ + F+ GD
Sbjct: 531 MGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDK 590
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
H S++IY KLDEL ++ G+VP +L D++E+E++ L HSEKLA+AFGLI T
Sbjct: 591 CHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQEERVLLY-HSEKLAIAFGLINT 649
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ ++I ++ R+CGDCH AIKLI+ +T REI+VRD +RFH F +GSCSC D+W
Sbjct: 650 SDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 142/298 (47%), Gaps = 38/298 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + + A+ Y MR+ G NFTF +++ CAR + ++H+ +V+ G
Sbjct: 304 IIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHG 363
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D T+L++LY G + DA VFD +P KNV+SW A+I+GY N G EA+ MF
Sbjct: 364 FGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFE 423
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+LH G+ P+ + + VL+AC+ Y + +G +F + S
Sbjct: 424 RMLHEGMVPNHVTFLAVLSACS-------------YSGLSDRGWEIFESMSR-------- 462
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
D + + ++ MI+ G EA F ++ KP +L+
Sbjct: 463 ---------DHKIKPRAMHYACMIELLGREGLLDEA---FALIKDAPFKPTVNMWAALLT 510
Query: 241 ACASLGALELGVWASS--FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
AC ELG +A+ + E LSN V+ L+++Y + GR+ +A V + +K +
Sbjct: 511 ACRVHKNFELGKFAAEKLYGMGPEKLSNYVV---LLNIYNRSGRLEEAAAVIQTLKRR 565
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/563 (41%), Positives = 357/563 (63%), Gaps = 8/563 (1%)
Query: 49 GVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI 107
G + H L +++GL D + ++LL++Y HC DA + FD+IP N V TA+ SG +
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166
Query: 108 NEGNLEEAINMFRRLLHRGLKP--DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+ +++FR ++ G D + + L+A ++ D IH V++ G
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226
Query: 166 VFVATSLVDLYAKCG--NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
VA +++D YAK G ++ AR++FD M ++D+VSW++MI YA NG EAL ++ M
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLFDMM-DRDVVSWNTMIALYAQNGLSTEALGLYSKM 285
Query: 224 Q--RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
+++ T+ VL ACA GA++ G + + R N +GT+++DMY+KCG
Sbjct: 286 LIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCG 345
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
++ A K F+++K K+ + W+A+++G M+GY + A VF + K G++PN TF+ +L
Sbjct: 346 KVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLA 405
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C+HAGL+ EGR ++N+M F + P +EHYGCMVDLLGR+G LDEA+ LIK M ++P+A
Sbjct: 406 ACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 465
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMM 461
+WGALL+ CR++K +LA+ +L L+ NSG YVLLSNIY+ + W + ++R ++
Sbjct: 466 ALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLV 525
Query: 462 GDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVL 521
+GI+K G S VE+ G H F VGD SHP ++IY+ L++L ++ AG+VP T VL
Sbjct: 526 KTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVL 585
Query: 522 FDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGRE 581
D++ EE++ L HSEKLA+AF L+ + VI + KNLRVC DCH AIK+I+K+TGRE
Sbjct: 586 HDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGRE 645
Query: 582 IIVRDNNRFHCFIEGSCSCKDFW 604
II+RD RFH F +G CSC D+W
Sbjct: 646 IIIRDLKRFHHFKDGLCSCGDYW 668
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI + N A+ Y+ M G T VL ACA Q G R H+ +V+
Sbjct: 265 MIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVR 324
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
GL+ + +V TS++++Y CG + A K F I KN++SW+A+I+GY G +EA+++
Sbjct: 325 MGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHV 384
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYA 177
F + GLKP+ + + VL AC+ G LS + W + E G V +VDL
Sbjct: 385 FTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLG 444
Query: 178 KCGNMEKARRVFDQMPEK-DIVSWSSMIQG 206
+ G +++A + +M K D W +++
Sbjct: 445 RAGCLDEAYGLIKEMKVKPDAALWGALLSA 474
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/604 (38%), Positives = 347/604 (57%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + NDC ++ ++ ++ MR F VL+A LG H+ VK
Sbjct: 603 MVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTL 662
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V +LL++Y CG + DA F+ + + +V+ W+ +IS Y E+A +F
Sbjct: 663 YDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFI 722
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R++ + P+ FS+ VL AC + L K IH + + G +FV +L+DLYAKC
Sbjct: 723 RMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCS 782
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ME + +F + + + VSW+++I GY+ +GF + AL +F M+ ++ T VL
Sbjct: 783 DMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLR 842
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACAS ++ +E++ F S+ ++ +LID YAKCG + A ++F +K+ D V
Sbjct: 843 ACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVS 902
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++SG +++G +A +F + K I+ N TFV LL C GLV +G F+SM
Sbjct: 903 WNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMR 962
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P +EHY C+V LLGR+G+L++A I +P P+A+VW ALL+ C +HK +L
Sbjct: 963 LDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELG 1022
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+++ +EP + YVLLSN+YSA+ + A R M + G++K G SWVE+ G
Sbjct: 1023 RFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGE 1082
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F VG HP I + L+ L K G+VP TD VL D+EEE+K L HSE+L
Sbjct: 1083 VHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERL 1142
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
ALA+GL+ T P IRI KNLR C DCH K+ISKI +EIIVRD NRFH F EG+CSC
Sbjct: 1143 ALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSC 1202
Query: 601 KDFW 604
D+W
Sbjct: 1203 GDYW 1206
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 212/428 (49%), Gaps = 4/428 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+++G F+ A + +R EG F VLK L H+ K G
Sbjct: 502 LVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLG 561
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + FV ++L++ Y CG ++DA +VFD I K+ V+WTA++S Y E + +F
Sbjct: 562 HDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFS 621
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ K + F++ VL A L + K IH + V +L+D+YAKCG
Sbjct: 622 KMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCG 681
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+E AR F+ + D++ WS MI YA ++A ++F M R ++ P +++ VL
Sbjct: 682 NIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQ 741
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA++ L+LG + + S +G LID+YAKC M + ++F ++D ++V
Sbjct: 742 ACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVS 801
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN ++ G S +G+ + A VF ++ + T+ +L C ++ Q +
Sbjct: 802 WNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIE 861
Query: 361 R-VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ F+ ++ + ++D + G + +A E+ +++ E + + W A+++G +H + +
Sbjct: 862 KSTFNSDTIVSN--SLIDSYAKCGCIRDAREIFETL-KECDLVSWNAIISGYAVHGQAAM 918
Query: 420 AEHVLNQL 427
A+ + + +
Sbjct: 919 AQELFDMM 926
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 196/398 (49%), Gaps = 7/398 (1%)
Query: 30 NFTFPFVLKACAREHDFQLGVRSHSLIVKAG--LDCDEFVKTSLLNLYVHCGYLADALKV 87
++ + +L+ C D + G H +V++G D F LLN+Y G A +V
Sbjct: 428 SYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRV 487
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD +P++N+VS+ ++ G+ G EEA +F+RL G + + F + VL + L
Sbjct: 488 FDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTL 547
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
A +H + G RN FV ++L+D Y+ CG + ARRVFD + KD V+W++M+ Y
Sbjct: 548 GLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCY 607
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+ N P+ L +F M+ K + + VL A L ++ LG + + + +
Sbjct: 608 SENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTER 667
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ L+DMYAKCG + A F + + D ++W+ ++S + + AF +F ++ +
Sbjct: 668 HVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRS 727
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+ PN + +L C + L+D G+Q N ++ + + ++DL + ++
Sbjct: 728 SVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVG-NALIDLYAKCSDMES 786
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
+ E+ S+ + N + W ++ G + K+ E L+
Sbjct: 787 SLEIFSSL-RDVNEVSWNTIIVG---YSKSGFGEAALS 820
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 143/290 (49%), Gaps = 20/290 (6%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG--KGRNVFVATSLVDLYAKCGNMEKARR 187
DS++ R+L C GD + +HG+V +G ++F A L+++Y K G A R
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
VFD +PE+++VS+ +++QG+A G +EA +F ++ E + + + VL ++
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546
Query: 248 LEL--GVWASSFM---ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
L L GV A + +RN F +G+ LID Y+ CG ++ A +VF + KD V W
Sbjct: 547 LGLAWGVHACACKLGHDRNAF-----VGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWT 601
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKC--GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
A+VS S N + +F ++ + P T V C + ++ +G
Sbjct: 602 AMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIH----AC 657
Query: 361 RVFSLTPMIEH-YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
V +L H YG ++D+ + G +++A L M + I+W +++
Sbjct: 658 SVKTLYDTERHVYGALLDMYAKCGNIEDA-RLAFEMVTNDDVILWSLMIS 706
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/601 (37%), Positives = 348/601 (57%), Gaps = 1/601 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G SN AIE + M +G + T VL ACAR H + +G H VK G
Sbjct: 482 VISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTG 541
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + + +LL++Y +C ++F ++ KNVVSWTA+I+ Y G ++ + +
Sbjct: 542 LIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQ 601
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+KPD F++ VL L K +HGY G + + VA +L+++Y C
Sbjct: 602 EMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCR 661
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
NME+AR VFD + KDI+SW+++I GY+ N F E+ +F +M + KP TM +L
Sbjct: 662 NMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILP 720
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A AS+ +LE G ++ R FL + L+DMY KCG + A +F + K+ +
Sbjct: 721 AVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLIS 780
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G M+G K A +F Q+ G++P+ +F +L C H+GL EG +FFN+M
Sbjct: 781 WTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMR 840
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + P ++HY C+VDLL +G L EA E I+SMP+EP++ +W +LL GCR+H+ LA
Sbjct: 841 KEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLA 900
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V +++ LEP N+G YVLL+NIY+ + +W K+++ +G +G+++ GCSW+EV G
Sbjct: 901 EKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGK 960
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F+ + +HP +I LD +A +++ G P + L + L HS KL
Sbjct: 961 VHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKL 1020
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+ FG++ IR+ KN +VC CHEA K ISK+ REII+RD++RFH F G CSC
Sbjct: 1021 AVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSC 1080
Query: 601 K 601
+
Sbjct: 1081 R 1081
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 201/402 (50%), Gaps = 33/402 (8%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLD--CDEFVKTSLLNLYVHCGYLADALKVFD 89
++ V++ C E + R+H+L V+AG + L+ Y+ CG L A VFD
Sbjct: 96 SYCAVVQLCGEERSLEAARRAHAL-VRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFD 154
Query: 90 DIPDK--NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
++P + +V WT+++S Y G+ +E +++FR++ G+ PD+ ++ VL LG +
Sbjct: 155 EMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSI 214
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ + IHG + + G G VA +L+ LY++CG ME A +VFD M +D +SW+S I GY
Sbjct: 215 TEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGY 274
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL--- 264
SNG+ A+D+F M E + T++ VL ACA LG +G + ++ L
Sbjct: 275 FSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDL 334
Query: 265 ------SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV-VWNAVVSGLSMNGYVKVA 317
+ LG+ L+ MY KCG M A +VF M K V VWN ++ G + + +
Sbjct: 335 ESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEES 394
Query: 318 FGVFGQLEKCGIQPNGNTFVGLL-----CGCTHAGLVDEG---RQFFNSMSRVFSLTPMI 369
+F Q+ + GI P+ + LL C GLV G + F + V +
Sbjct: 395 LLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCN----- 449
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
++ +S +D A + MP + + I W ++++GC
Sbjct: 450 ----ALISFYAKSNMIDNAVLVFDRMPHQ-DTISWNSVISGC 486
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 191/408 (46%), Gaps = 12/408 (2%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
FQ + + M+ G P VLK A G H L+ K GL V +
Sbjct: 179 FQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANA 238
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ LY CG + DA++VFD + ++ +SW + ISGY + G + A+++F ++ G +
Sbjct: 239 LIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEIS 298
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAG---------KGRNVFVATSLVDLYAKCGN 181
S +++ VL AC +LG K +HGY ++G G + + + LV +Y KCG+
Sbjct: 299 SVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGD 358
Query: 182 MEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
M ARRVFD MP K ++ W+ ++ GYA +E+L +F M + P+ + + +L
Sbjct: 359 MGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLK 418
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
L G+ A ++ + F + + LI YAK + A VF M +D +
Sbjct: 419 CITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTIS 478
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN+V+SG + NG A +F ++ G + + T + +L C + GR + S
Sbjct: 479 WNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGR-VVHGYS 537
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
L ++D+ +++ ++M + N + W A++
Sbjct: 538 VKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMA-QKNVVSWTAMI 584
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 169/342 (49%), Gaps = 12/342 (3%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQL-GVRSHSLIVKAG 60
I G+ SN A++ ++ M +EG ++ T VL ACA E F+L G H +K+G
Sbjct: 271 ISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACA-ELGFELVGKVVHGYSMKSG 329
Query: 61 L---------DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-NVVSWTAIISGYINEG 110
L DE + + L+ +YV CG + A +VFD +P K NV W I+ GY
Sbjct: 330 LLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAA 389
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
EE++ +F ++ G+ PD ++ +L T L HGY+ + G G V
Sbjct: 390 EFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCN 449
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+L+ YAK ++ A VFD+MP +D +SW+S+I G SNG EA+++F M + +
Sbjct: 450 ALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHEL 509
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ T++ VL ACA +G + + + L L+DMY+ C ++F
Sbjct: 510 DSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIF 569
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
R M K+ V W A+++ + G G+ ++ GI+P+
Sbjct: 570 RNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPD 611
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 196/420 (46%), Gaps = 15/420 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLK-----ACAREHDFQLGVRSHSL 55
++ G+ F+ ++ + M G P +LK +CAR+ G+ +H
Sbjct: 381 IMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARD-----GLVAHGY 435
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
+VK G V +L++ Y + +A+ VFD +P ++ +SW ++ISG + G EA
Sbjct: 436 LVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEA 495
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
I +F R+ +G + DS +++ VL AC + + +HGY + G +A +L+D+
Sbjct: 496 IELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDM 555
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y+ C + ++F M +K++VSW++MI Y G + + M + +KP+ + +
Sbjct: 556 YSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAV 615
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
VL A +L+ G + RN + L++MY C M +A VF + +
Sbjct: 616 TSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTN 675
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
KD + WN ++ G S N + +F +F + +PN T +L ++ GR+
Sbjct: 676 KDIISWNTLIGGYSRNNFANESFSLFSDM-LLQFKPNTVTMTCILPAVASISSLERGREI 734
Query: 356 FN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ R F + +VD+ + G L A L + + N I W ++AG +H
Sbjct: 735 HAYALRRGFLEDSYTSN--ALVDMYVKCGALLVARVLFDRL-TKKNLISWTIMIAGYGMH 791
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/585 (39%), Positives = 349/585 (59%), Gaps = 1/585 (0%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
MR G P FTF +L A A G + HSLI K G D + FV T+L+++Y C
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLT 139
+ A++VFD +P++N+VSW ++I G+ + + A+ +F+ +L + + P+ S+ VL+
Sbjct: 61 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
AC +G L+ + +HG V + G +V SL+D+Y KC ++ ++F + ++D+V+
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W+ ++ G+ N +EA + F+ M+RE + P+ + VL + ASL AL G +
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
+ ++ N + +LI MYAKCG + A +VF ++D + + W A++S ++G
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F + GI+P+ TFV +L C+H G V+EG FNSM ++ + P EHY CMVDLL
Sbjct: 301 LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLL 360
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
GR+G LDEA I+SMPM+P VWGALL CR + + +L +EP+N GNYV
Sbjct: 361 GRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYV 420
Query: 440 LLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYS 499
LL+N+ + S + +A ++R +MG G++K GCSW++V + F D SH S++IY
Sbjct: 421 LLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYK 480
Query: 500 KLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAK 559
L++L +K G+V T+ V +EE E++ L HSEKLALAFGL+T IRI K
Sbjct: 481 MLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKK 540
Query: 560 NLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
NLR CG CH +KL SKI REIIVRD NRFH F +G CSC D+W
Sbjct: 541 NLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 193/378 (51%), Gaps = 10/378 (2%)
Query: 1 MIRGFVSNDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI GF N+ + A+ F + +R + +P + VL ACA G + H ++VK
Sbjct: 82 MIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKF 141
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL +V SL+++Y C + + +K+F + D++VV+W ++ G++ EEA N F
Sbjct: 142 GLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYF 201
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ PD S VL + L L IH + + G +N+ + SL+ +YAKC
Sbjct: 202 WVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKC 261
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ A +VF+ + + +++SW++MI Y +G + +++F +M E ++P + T V VL
Sbjct: 262 GSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVL 321
Query: 240 SACASLGALELGVWASSFMER-NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
SAC+ G +E G+ + M++ ++ P ++D+ + G + +A + M K
Sbjct: 322 SACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPT 381
Query: 299 -VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFF 356
VW A++ G +K+ +L + ++P N +V L CT +G ++E
Sbjct: 382 PSVWGALLGACRKYGNLKMGREAAERLFE--MEPYNPGNYVLLANMCTRSGRLEEA---- 435
Query: 357 NSMSRVFSLTPMIEHYGC 374
N + R+ + + + GC
Sbjct: 436 NEVRRLMGVNGVRKEPGC 453
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/566 (40%), Positives = 347/566 (61%), Gaps = 16/566 (2%)
Query: 53 HSLIVKAG--LDCDEFVKTSLLNLYVHCG-----YLADALKVFDDIPDKNVVSWTAII-- 103
H++ VKAG L T LL L G +LA A +VFD IP V W +
Sbjct: 48 HAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNTLLR 107
Query: 104 ---SGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
G G EEA +F R++ G+ PD+++ V +L AC + HG +A
Sbjct: 108 GYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKA 167
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
G + +VA +L+++YA+CG++ AR +FD+M + +VS+++MI + P EAL +F
Sbjct: 168 GAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLF 227
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
MQ + LKP T++ VLSACA LGALELG W ++ + S + T LIDMYAKC
Sbjct: 228 REMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKC 287
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G + A VF++M+ +D+ W+ ++ + +GY + A +F +++K G++P+ TF+G+L
Sbjct: 288 GSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVL 347
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C+H+G+V EG Q+F+SM R + + I+HYGC+ DLL RSGQL+ A++ I +P++P
Sbjct: 348 YACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPT 406
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSM 460
AI+W LL+ C H D+ + V +++ L+ + G+YV+ SN+ + + +W + +R +
Sbjct: 407 AILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKL 466
Query: 461 MGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHV 520
M +KG+ K+ GCS +E+D +VHEF GD SHP S++ +DE+ +LK G+VP T HV
Sbjct: 467 MSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHV 526
Query: 521 LFDIE--EEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKIT 578
F +E EEEK L HSEKLA++FGL+ TAP +RI KNLRVC DCH KL+S +
Sbjct: 527 -FHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVF 585
Query: 579 GREIIVRDNNRFHCFIEGSCSCKDFW 604
R II+RD NRFH F +G CSC D+W
Sbjct: 586 NRRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 192/355 (54%), Gaps = 6/355 (1%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M EG P +TF +LKACA + G ++H + VKAG E+V +L+N+Y CG
Sbjct: 129 MMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGD 188
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
+ A +FD + + VVS+ A+I+ + EA+ +FR + +GLKP S +++ VL+A
Sbjct: 189 VRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSA 248
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
C LG L +WIH Y+ + V V T+L+D+YAKCG++E A VF M +D +W
Sbjct: 249 CALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAW 308
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
S M+ YA++G+ +EA+ MF M+++ +KP+ T +GVL AC+ G + G+ M
Sbjct: 309 SVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE 368
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ-VVWNAVVSGLSMNGYVKVAFG 319
+S + D+ A+ G++ +A K E+ K ++W ++S + +G V +
Sbjct: 369 YGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKR 428
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
VF ++ + +G +V C + G +E N + ++ S +++ GC
Sbjct: 429 VFERILELD-DSHGGDYVIFSNLCANTGRWEE----MNMVRKLMSEKGVVKVPGC 478
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI V + A+ + M+ +G PT+ T VL ACA +LG H I K
Sbjct: 210 MITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMR 269
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD V T+L+++Y CG L DA+ VF D+ ++ +W+ ++ Y N G EAI+MF
Sbjct: 270 LDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFE 329
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +G+KPD + + VL AC+ G +S + E G + + DL A+ G
Sbjct: 330 EMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSG 389
Query: 181 NMEKARRVFDQMPEKDI-VSWSSMIQGYASNG 211
+E+A + D++P K + W +++ A +G
Sbjct: 390 QLERAYKFIDELPIKPTAILWRTLLSACAGHG 421
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/606 (39%), Positives = 351/606 (57%), Gaps = 6/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G V N A++ ++ R+ + T T+ V+ CA L + HS ++K G
Sbjct: 229 LMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHG 288
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
V T+L++ Y G L AL VF + +NVVSWTA+I G I G++ A +F
Sbjct: 289 FHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALF 348
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ G+ P+ + +LT + + S IH V + V T+L+ Y+K
Sbjct: 349 SRMREDGVAPNDLTYSTILT----VSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKL 404
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ E+A +F + +KD+VSWS+M+ YA G A + F M LKP +T+ +
Sbjct: 405 CSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAI 464
Query: 240 SACASLGA-LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
ACAS A ++LG + ++ + + L+ MYA+ G + A VF D+D
Sbjct: 465 DACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDL 524
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ WN+++SG + +GY + A VF Q+E GI +G TF+ ++ GC HAGLV+EG+Q+F+
Sbjct: 525 LSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDL 584
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M R + +TP ++HY CMVDL R+G+LDE LI+ MP +W ALL CR+HK +
Sbjct: 585 MVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVE 644
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L + +L++LEP +S YVLLSNIYSA+ KW + ++R +M K ++K GCSW+++
Sbjct: 645 LGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIK 704
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F+ D SHPLSE+IY+KL + KLK G+ P T V D+ E++K+ LA HSE
Sbjct: 705 NKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSE 764
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
+LALAFGLI T P + I KNLRV GD H +K++S+I REI++RD RFH F G C
Sbjct: 765 RLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVC 824
Query: 599 SCKDFW 604
SC DFW
Sbjct: 825 SCGDFW 830
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 182/340 (53%), Gaps = 6/340 (1%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLD 62
+GFV Q F ++ R +G ++K C D LG + H+L V+ G D
Sbjct: 32 QGFV----HQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHD 87
Query: 63 -CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
D V TSL+++Y++ + D KVF+ + +NVV+WT++++GYI G L + +++F R
Sbjct: 88 HGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFR 147
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ G+ P+ F+ VL+ G + + +H + G VFV SL+++YAKCG
Sbjct: 148 MRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGL 207
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+E+AR VF +M +D+VSW++++ G NG EAL +F++ + T V++
Sbjct: 208 VEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINL 267
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV- 300
CA+L L L S + ++ F S + T L+D Y K G++ +A VF M VV
Sbjct: 268 CANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVS 327
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
W A++ G NG + +A +F ++ + G+ PN T+ +L
Sbjct: 328 WTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTIL 367
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 207/453 (45%), Gaps = 13/453 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G++ + + MR EG P FTF VL A + LG H+ +K G
Sbjct: 128 LLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFG 187
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
FV SL+N+Y CG + +A VF + +++VSW +++G + G EA+ +F
Sbjct: 188 CCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFH 247
Query: 121 --RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
R L ++S V+ C L L A+ +H V + G V T+L+D Y K
Sbjct: 248 DSRSSITMLTESTYST--VINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNK 305
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
G ++KA VF M +++VSW++MI G NG A +F M+ + + P T
Sbjct: 306 AGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYST 365
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+L+ S + + A + + P +GT L+ Y+K +A +F+ + KD
Sbjct: 366 ILT--VSEASFPPQIHAQVI--KTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKD 421
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC-THAGLVDEGRQFF 356
V W+A+++ + G A F ++ G++PN T + C + A VD GRQ F
Sbjct: 422 VVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQ-F 480
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+++S + +V + R G ++ A + + + + + W ++L+G H
Sbjct: 481 HAISIKHRCHDALCVSSALVSMYARKGSIENA-QCVFERQTDRDLLSWNSMLSGYAQHGY 539
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+ A V Q+ +E + LS I +H
Sbjct: 540 SQKALDVFRQM-EVEGIDMDGLTFLSVIMGCAH 571
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 210 NGFPKEALDMFYNMQRENLK-PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
GF +ALD F + R + ++G++ C S+ LG + R +
Sbjct: 32 QGFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDI 91
Query: 269 -LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+GT+L+DMY + KVF M ++ V W ++++G G + +F ++
Sbjct: 92 RVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAE 151
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G+ PN TF +L G+VD G Q ++ S F + ++++ + G ++E
Sbjct: 152 GVWPNPFTFSSVLSMVASQGMVDLG-QHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEE 210
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKK 416
A + M + + W L+AG L+ +
Sbjct: 211 ARVVFCRMETR-DMVSWNTLMAGLVLNGR 238
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/608 (39%), Positives = 348/608 (57%), Gaps = 40/608 (6%)
Query: 29 TNFT-FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
TN+ +P +L +C + ++ H+ I+ +G + T L+NLY A V
Sbjct: 50 TNYLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSV 105
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGD 146
FD P+ + + W ++I Y EA+ M+ ++ +G L+ D F ++ +++GD
Sbjct: 106 FDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGD 165
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
L A+ V + R+V +++ ++ + ARRVFDQM ++D VSW +M+ G
Sbjct: 166 LKRAR----EVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAG 221
Query: 207 YA------------------------------SNGFPKEALDMFYNMQRENLKPEYYTMV 236
YA NG KEA+ F+ M+ EN P T V
Sbjct: 222 YAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFV 281
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VL A A L A G+ + + + FLSN ++G +LIDMYAKCG++ + K+F EM K
Sbjct: 282 SVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK 341
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
D V WNA++SG +++G+ A +F +++ +Q + +FV +L C HAGLV+EGR+ F
Sbjct: 342 DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIF 401
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+SMS + + P +EHY CMVDLLGR+G DE IK MP+EP+A VWGALL CR+H
Sbjct: 402 HSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSN 461
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
L E L+ L+ LEP N ++V+LS+IY+ S +W DA K RS M D G++K GCSWVE
Sbjct: 462 VKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVE 521
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
+ VH F VGD SHP E ++ + L K++ G+VP VL ++EEE+K+ FL H
Sbjct: 522 LKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSH 581
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SE+LA+ F L+ T P I+I KNLRVC DCH K ISKIT R IIVRD RFH F +G
Sbjct: 582 SERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDG 641
Query: 597 SCSCKDFW 604
CSC D+W
Sbjct: 642 ICSCNDYW 649
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 166/371 (44%), Gaps = 36/371 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVK- 58
MIR + + + A+E Y M +G L + F ++ ++ D + + K
Sbjct: 120 MIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR 179
Query: 59 ---------AGL-----------------DCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
AGL D D+ +++ Y H G + L++FD +
Sbjct: 180 DVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMK 239
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
N V+W II+ Y+ G+ +EAI+ F ++ P+S + V VL A L
Sbjct: 240 LGN-VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA 298
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
H + + G N V SL+D+YAKCG ++ + ++F++M KD VSW++M+ GYA +G
Sbjct: 299 FHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGH 358
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG-- 270
A+ +F MQ ++ + + V VLSAC G +E G M +++ P L
Sbjct: 359 GDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMS-DKYHIKPDLEHY 417
Query: 271 TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
++D+ + G + + M + D VW A++ M+ VK+ L K +
Sbjct: 418 ACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVK--L 475
Query: 330 QP-NGNTFVGL 339
+P N FV L
Sbjct: 476 EPRNPAHFVVL 486
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 131/300 (43%), Gaps = 44/300 (14%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I ++ N + AI ++ MR E F P + TF VL A A F+ G+ H+ I++ G
Sbjct: 248 IIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMG 307
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V SL+++Y CG L + K+F+++ K+ VSW A++SGY G+ + AI +F
Sbjct: 308 FLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFS 367
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ ++ DS S V VL+AC G
Sbjct: 368 LMQESQVQIDSVSFVSVLSACRH-----------------------------------AG 392
Query: 181 NMEKARRVFDQMPEK-----DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
+E+ R++F M +K D+ ++ M+ G E L M E P+
Sbjct: 393 LVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVE---PDAGVW 449
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+L +C ++LG A + + E NP L +YA+ GR A A K +M D
Sbjct: 450 GALLGSCRMHSNVKLGEVALDHLVKLE-PRNPAHFVVLSSIYAQSGRWADAGKARSKMND 508
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/518 (41%), Positives = 340/518 (65%), Gaps = 3/518 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISG-YINEGNLEEAINMFRRLLHRGL-KPDSFSIVRVLTAC 141
A K+F I N+ SW ++I G ++ +E + +FR+++ RG P++F++ VL AC
Sbjct: 112 ARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKAC 171
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+ + L + +H V ++G G + FV T+LV+ YAKC ++ A +VFD++ ++++V+WS
Sbjct: 172 SIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWS 231
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+MI GYA G EAL +F +MQ+ + P+ TMV V+SACA+ GAL+ G W +++ +
Sbjct: 232 TMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQ 291
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
++ L T L++MYAKCG + +A +VF M KD W++++ GL++NG + A F
Sbjct: 292 LIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEF 351
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++E+ ++PN TF+G+L C H+GLV EGR++++SM F + P +E YGCMVDLL R
Sbjct: 352 FRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE-FGIVPSMELYGCMVDLLCR 410
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+ +++A L+++MP+ PN ++W LL GC+ K D +E V +L+ LEP N+ NY+LL
Sbjct: 411 ASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILL 470
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
SN+Y++ +W +++R M GI+ + GCS +EVDG+VHEF++GD SHP + ++ L
Sbjct: 471 SNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREIL 530
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+++ ++ A G P VL ++ +EEK+ L HSE+LA+A+GL+ T IRI KNL
Sbjct: 531 RDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNL 590
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
RVCGDCHE K+IS REIIVRD RFH F+ GSCS
Sbjct: 591 RVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVNGSCS 628
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 115/311 (36%), Positives = 181/311 (58%), Gaps = 5/311 (1%)
Query: 1 MIRGFV-SNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MIRG S + + + M G+ P FT FVLKAC+ + G + H+ ++K
Sbjct: 130 MIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLK 189
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+G FV+T+L+N Y C + A KVFD+I D+N+V+W+ +ISGY G + EA+ +
Sbjct: 190 SGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGL 249
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
FR + G+ PD ++V V++AC G L T KW+H Y+N+ ++ ++T+LV++YAK
Sbjct: 250 FRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAK 309
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG +E+A+ VFD MP KD +WSSMI G A NG ++AL+ F+ M+ +KP + T +GV
Sbjct: 310 CGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGV 369
Query: 239 LSACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DK 296
LSACA G + G + SS +E S + G ++D+ + + AC + M
Sbjct: 370 LSACAHSGLVSEGRRYWSSMLEFGIVPSMELYG-CMVDLLCRASLVEDACTLVETMPISP 428
Query: 297 DQVVWNAVVSG 307
+ V+W ++ G
Sbjct: 429 NPVIWRTLLVG 439
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 147/271 (54%), Gaps = 8/271 (2%)
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP-KEALDMFYNMQRENL-KPEYYTMVG 237
G+++ AR++F Q+ +I SW+SMI+G + + P KE + +F M R P +TM
Sbjct: 107 GDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAF 166
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
VL AC+ + ALE G + + ++ F S+P + T L++ YAKC + A KVF E+ D++
Sbjct: 167 VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN 226
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V W+ ++SG + G V A G+F ++K G+ P+ T V ++ C +G +D G+
Sbjct: 227 LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHA 286
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
+++ T + E +V++ + G ++ A E+ +MP++ + W +++ G ++
Sbjct: 287 YINKQLIETDL-ELSTALVNMYAKCGCIERAKEVFDAMPVK-DTKAWSSMIVGLAIN--- 341
Query: 418 DLAEHVLNQLIALEPWN-SGNYVLLSNIYSA 447
LAE L + +E N+V + SA
Sbjct: 342 GLAEDALEEFFRMEEAKVKPNHVTFIGVLSA 372
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/529 (41%), Positives = 335/529 (63%), Gaps = 8/529 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR---EHDFQLGVRSHSLIV 57
++R F ++ Q + Y+ +RN G +P TFP +LKA ++ E+ FQ ++ IV
Sbjct: 75 IVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQF----YAHIV 130
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
K GLD D FV+ SL++ + HCGY+ + ++F + K+VVSWTA+I+G + G EA+
Sbjct: 131 KFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALE 190
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG-RNVFVATSLVDLY 176
F + G++ D ++V VL A L D+ +W+HG+ E+G+ +V+V ++LVD+Y
Sbjct: 191 CFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMY 250
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+KCG + A +VF++MP +++VSW ++I GY KEAL +F M E ++P T+
Sbjct: 251 SKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVT 310
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
L+ACA LG+L+ G W +++R++ N LGT L+DMY+KCG + +A VF ++ K
Sbjct: 311 SALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAK 370
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
D W A+++GL+M G + +F Q+ + +QPNG TF+G+L C H GLVDEG + F
Sbjct: 371 DVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELF 430
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
M + L P ++HYGCMVDLLGR+G+L+EA + I+SMPMEP VWGAL +GC +HK
Sbjct: 431 RLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKA 490
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
+L EH+ N LI L+P +SG Y+LL+N+YS KW AA +R +M KG+ K CSW+E
Sbjct: 491 FELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPACSWIE 550
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIE 525
V+GV+HEF+ D SH S +Y L + +LK A + ++ + F I+
Sbjct: 551 VNGVIHEFIAFDKSHIESINVYMMLGSVTAQLKLATYALDSNLLTFTID 599
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 191/381 (50%), Gaps = 10/381 (2%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVH-CGYLADALKVFDDIPDKNVVSWTAIISGYINE 109
++ S+++ +GL F + LL GY L +FD + + W I+ +
Sbjct: 26 QTTSILITSGLAHHTFFLSDLLRSATKDLGY---TLLLFDRLATPYIFLWNTIVRSFSAS 82
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+ + + RL + G+ PD + +L A ++L + + ++ + ++ + G + FV
Sbjct: 83 SQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQF-YAHIVKFGLDFDAFVQ 141
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
SLV +A CG ++ +RR+F + +KD+VSW+++I G NG EAL+ F M+ ++
Sbjct: 142 NSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVE 201
Query: 230 PEYYTMVGVLSACASLGALELGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+ T+V VL A A L + G W F +E + + +G+ L+DMY+KCG A K
Sbjct: 202 VDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVK 261
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF EM ++ V W A+++G K A VF ++ GI+PN +T L C G
Sbjct: 262 VFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGS 321
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+D+GR + R S + G +VD+ + G +DEA + + +P + + W A+
Sbjct: 322 LDQGRWLHEYVDR--SKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAK-DVYPWTAM 378
Query: 408 LAGCRLHKKTDLAEHVLNQLI 428
+ G + + ++ +Q+I
Sbjct: 379 INGLAMRGDALSSLNLFSQMI 399
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 144/331 (43%), Gaps = 32/331 (9%)
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL-- 245
+FD++ I W+++++ ++++ P+ L + ++ + P+ +T +L A + L
Sbjct: 60 LFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 246 -GALELGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+ F ++ + F+ N +L+ +A CG + + ++F E KD V W A
Sbjct: 120 ENPFQFYAHIVKFGLDFDAFVQN-----SLVSAFAHCGYVDCSRRLFIETAKKDVVSWTA 174
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR---QFFNSMS 360
+++G NG A F ++ G++ + T V +LC V GR F+
Sbjct: 175 LINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESG 234
Query: 361 RVFSLTPMIEHY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
RV + + Y +VD+ + G D+A ++ MP N + WGAL+AG +
Sbjct: 235 RV-----IWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTR-NLVSWGALIAGYVQCNRYK 288
Query: 419 LAEHVLNQLI--ALEPWNSGNYVLLSNIYSAS--------HKWNDAAK--IRSMMGDKGI 466
A V ++I +EP S L+ H++ D +K + S +G +
Sbjct: 289 EALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALV 348
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKI 497
C V+ +V E L + +P + I
Sbjct: 349 DMYSKCGCVDEALLVFEKLPAKDVYPWTAMI 379
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/586 (40%), Positives = 343/586 (58%), Gaps = 10/586 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHS-LIVKAGLDCDEFVKTSLLNLYVHCGYLADALK 86
PT T+ +L A AR D L H L D F+ T L+ Y L A +
Sbjct: 246 PTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALSALPAARQ 305
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC----- 141
VFD+ P KN+ W A++ + EEA+ + G+ DS+S L AC
Sbjct: 306 VFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASA 365
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+ L + + +H + G G + VAT+L+D YAK G + A RVF MP++++VSWS
Sbjct: 366 SHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWS 425
Query: 202 SMIQGYASNGFPKEALDMFYNMQREN--LKPEYYTMVGVLSACASLGALELGVWASSFME 259
+MI YA N P +A+ +F M + L P T+V VL ACA + AL G +++
Sbjct: 426 AMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYIL 485
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV-WNAVVSGLSMNGYVKVAF 318
R F + L+ MY KCG + +F + + VV WN+++SG M+G+ + +
Sbjct: 486 RRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESL 545
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
VF ++ + GI PN TFV +L C+H GLV++G++ F SM +++TP EHY CMVDL
Sbjct: 546 QVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVE-YNVTPRAEHYACMVDL 604
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNY 438
LGR+G+LDEA ELI+SM ++P+ VWG+LL CR+H + AE + L LEP N+GNY
Sbjct: 605 LGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNY 664
Query: 439 VLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIY 498
VLL++IY+ + N ++ ++ + ++K+ GCSW+EV ++ F+ DN +P E++
Sbjct: 665 VLLADIYARAKLQNQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQ 724
Query: 499 SKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIA 558
+ + E T++K G+VP T VL+DIEEEEK+ L HSEKLA+AFGLI T + IRI
Sbjct: 725 ALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRIT 784
Query: 559 KNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLR+C DCH K ISK T REI+VRD NRFH F G CSC+D+W
Sbjct: 785 KNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHHFRNGVCSCRDYW 830
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 8/210 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI + N+ AI+ + M + +P + T VL ACA + G H+ I++
Sbjct: 427 MIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILR 486
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI-PDKNVVSWTAIISGYINEGNLEEAIN 117
G D V +L+ +Y+ CG L +F+ I +NVVSW ++ISGY G E++
Sbjct: 487 RGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQ 546
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+F ++ G+ P+ + V VL AC+ +G + K + + E +VDL
Sbjct: 547 VFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMVDLLG 606
Query: 178 KCGNMEKARRVFDQM---PEKDIVSWSSMI 204
+ G +++A + M P + W S++
Sbjct: 607 RAGRLDEAVELIQSMRIQPSPQV--WGSLL 634
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/549 (38%), Positives = 344/549 (62%), Gaps = 1/549 (0%)
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
++ G + D++++ +L ++V CG + DA ++FD++P++N+VSW IISG ++ G+ EA
Sbjct: 1 MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+F + SF+ ++ A L +S + +H + G G ++FV+ +L+D+
Sbjct: 61 FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y+KCG++E AR VF++MPEK V W+++I GYA +G+ +EALDM+Y M+ +K +++T
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
++ CA L ++E A + + R+ F S+ V T L+D Y+K GR+ A VF +M
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMAS 240
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
K+ + WNA++ G +G A +F Q+ + + PN TF+ +L C+H+GL + G +
Sbjct: 241 KNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEI 300
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F SM R + P HY CM++L+GR G LDEA LI+ P +P A +W ALL CR+++
Sbjct: 301 FQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNE 360
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
+L + +L +EP NY++L NIY+++ +AA + + KG++ CSW+
Sbjct: 361 NFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWI 420
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
EV H FL GDN HP ++IY K+D+L ++ G+VP +L D++E+E++ L
Sbjct: 421 EVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRLY- 479
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+AFGLI+T ++I + R+CGDCHEAIKLI+++TGREI++RD RFH F
Sbjct: 480 HSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKH 539
Query: 596 GSCSCKDFW 604
G CSC+D+W
Sbjct: 540 GHCSCEDYW 548
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 189/364 (51%), Gaps = 5/364 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V F A + +M E +FTF +++A A +G + H+ +K G
Sbjct: 47 IISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMG 106
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+++Y CG + DA VF+++P+K V W II+GY G EEA++M+
Sbjct: 107 IGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYY 166
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+K D F+ ++ C +L + AK H + G G ++ T+LVD Y+K G
Sbjct: 167 EMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWG 226
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E AR VFD+M K+++SW+++I GY ++G EA+++F M +E + P + T + VLS
Sbjct: 227 RIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLS 286
Query: 241 ACASLGALELGVWASSFMER-NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+ G E G M R N + +I++ + G + +A + R K
Sbjct: 287 ACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTA 346
Query: 300 -VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG-NTFVGLLCGCTHAGLVDEGRQFFN 357
+W A+++ +N ++ G F + G++P+ N ++ LL AG + E +
Sbjct: 347 NMWAALLTACRVNENFEL--GKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVH 404
Query: 358 SMSR 361
++ R
Sbjct: 405 TLKR 408
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/575 (39%), Positives = 350/575 (60%), Gaps = 12/575 (2%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC-----GYLADALKVFDD 90
+LK C+ +F+ +SH+ I+K GL D F + NL C G + A +F
Sbjct: 37 LLKKCSNMEEFK---QSHARILKLGLFGDSFCAS---NLVATCALSDWGSMDYACSIFRQ 90
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+ + + ++ G++ + N EEA+ ++ + RG+KPD+F+ +L AC +L +
Sbjct: 91 MDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEG 150
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+H ++ + G +VFV SL+ +Y KCG + VF+QM E+ + SWS++I +AS
Sbjct: 151 MQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASL 210
Query: 211 GFPKEALDMFYNMQRENL-KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
G + L + +M E + E +V VLSAC LGAL+LG F+ RN N ++
Sbjct: 211 GMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIV 270
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
T+LI+MY KCG + + +F++M K+++ ++ ++SGL+M+GY + +F ++ + G+
Sbjct: 271 ETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGL 330
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+P+ +VG+L C+HAGLV EG Q FN M + P I+HYGCMVDL+GR+G++DEA
Sbjct: 331 EPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEAL 390
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
ELIKSMPMEPN ++W +LL+ ++H E QL L+ + +YV+LSN+Y+ +
Sbjct: 391 ELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQ 450
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
+W D AK R+ M KG+ + G S VEV +H F+ D HP SE +Y L ++ +LK
Sbjct: 451 RWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLK 510
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
G+ P T VL D++EEEK+ L+ HS+KLA+A+ LI T+ IRI +NLR+C DCH
Sbjct: 511 FEGYSPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRIVRNLRMCNDCHT 570
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KLIS I REI VRD +RFH F +G+CSC+D+W
Sbjct: 571 YTKLISIIFDREITVRDRHRFHHFKDGACSCRDYW 605
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 190/340 (55%), Gaps = 3/340 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+RG V + + A+ Y M G P NFT+P +LKACAR + G++ H+ I+K G
Sbjct: 102 MMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLG 161
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+ SL+++Y CG + VF+ + +++V SW+A+I+ + + G + + +
Sbjct: 162 LENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLG 221
Query: 121 RLLHRGL-KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ + G + + +V VL+ACT LG L + +HG++ G NV V TSL+++Y KC
Sbjct: 222 DMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKC 281
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++ K +F +M +K+ +S+S MI G A +G+ +E L +F M + L+P+ VGVL
Sbjct: 282 GSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVL 341
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGT-TLIDMYAKCGRMAQACKVFREMK-DKD 297
+AC+ G ++ G+ + M+ + + ++D+ + G++ +A ++ + M + +
Sbjct: 342 NACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPN 401
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
V+W +++S ++ ++ QL K Q + V
Sbjct: 402 DVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVV 441
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/565 (40%), Positives = 346/565 (61%), Gaps = 14/565 (2%)
Query: 53 HSLIVKAG--LDCDEFVKTSLLNLYVHCG-----YLADALKVFDDIPDKNVVSWTAII-- 103
H++ VKAG L T LL L G +LA A +VFD IP V W +
Sbjct: 48 HAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVIWYNTLLR 107
Query: 104 ---SGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA 160
G G EEA +F R++ G+ PD+++ V +L AC + HG +A
Sbjct: 108 GYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKA 167
Query: 161 GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
G + +VA +L+++YA+CG++ AR +FD+M + +VS+++MI + P EAL +F
Sbjct: 168 GAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLF 227
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
MQ + LKP T++ VLSACA LGALELG W ++ + S + T LIDMYAKC
Sbjct: 228 REMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKC 287
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G + A VF++M+ +D+ W+ ++ + +GY + A +F +++K G++P+ TF+G+L
Sbjct: 288 GSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVL 347
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C+H+G+V EG Q+F+SM R + + I+HYGC+ DLL RSGQL+ A++ I +P++P
Sbjct: 348 YACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPT 406
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSM 460
AI+W LL+ C H D+ + V +++ L+ + G+YV+ SN+ + + +W + +R +
Sbjct: 407 AILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKL 466
Query: 461 MGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHV 520
M +KG+ K+ GCS +E+D +VHEF GD SHP S++ +DE+ +LK G+VP T HV
Sbjct: 467 MSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHV 526
Query: 521 L-FDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITG 579
++ EEEK L HSEKLA++FGL+ TAP +RI KNLRVC DCH KL+S +
Sbjct: 527 FHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFN 586
Query: 580 REIIVRDNNRFHCFIEGSCSCKDFW 604
R II+RD NRFH F +G CSC D+W
Sbjct: 587 RRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 192/355 (54%), Gaps = 6/355 (1%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M EG P +TF +LKACA + G ++H + VKAG E+V +L+N+Y CG
Sbjct: 129 MMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGD 188
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
+ A +FD + + VVS+ A+I+ + EA+ +FR + +GLKP S +++ VL+A
Sbjct: 189 VRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSA 248
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
C LG L +WIH Y+ + V V T+L+D+YAKCG++E A VF M +D +W
Sbjct: 249 CALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAW 308
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
S M+ YA++G+ +EA+ MF M+++ +KP+ T +GVL AC+ G + G+ M
Sbjct: 309 SVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE 368
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ-VVWNAVVSGLSMNGYVKVAFG 319
+S + D+ A+ G++ +A K E+ K ++W ++S + +G V +
Sbjct: 369 YGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKR 428
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
VF ++ + +G +V C + G +E N + ++ S +++ GC
Sbjct: 429 VFERILELD-DSHGGDYVIFSNLCANTGRWEE----MNMVRKLMSEKGVVKVPGC 478
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI V + A+ + M+ +G PT+ T VL ACA +LG H I K
Sbjct: 210 MITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMR 269
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD V T+L+++Y CG L DA+ VF D+ ++ +W+ ++ Y N G EAI+MF
Sbjct: 270 LDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFE 329
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +G+KPD + + VL AC+ G +S + E G + + DL A+ G
Sbjct: 330 EMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSG 389
Query: 181 NMEKARRVFDQMPEKDI-VSWSSMIQGYASNG 211
+E+A + D++P K + W +++ A +G
Sbjct: 390 QLERAYKFIDELPIKPTAILWRTLLSACAGHG 421
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/510 (42%), Positives = 317/510 (62%), Gaps = 37/510 (7%)
Query: 1 MIRGF-VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRG SN+ + Y M ++G +P N+T PFVLKACA + G H +K
Sbjct: 110 IIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKM 169
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL D +V +L+ +Y C + A KVFD P +++VSWT +I GY+ G E + ++
Sbjct: 170 GLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLY 229
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
I+R + +VFV +LVD+Y KC
Sbjct: 230 --------------IIR----------------------NSNVNLDVFVGNALVDMYLKC 253
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+ AR+VF +MP K++VSW+SMI G A G KE+L MF MQR +KP+ T+V VL
Sbjct: 254 GDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVL 313
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
++CA+LG LELG W ++++RN+ ++ +G L+DMYAKCG + QAC VF+ M KD
Sbjct: 314 NSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVY 373
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+ A++ GL+M+G A +F ++ K GI+P+ TFVG+L C+H GLV+EGR++F M
Sbjct: 374 SYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDM 433
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
S +++L P +EHYGCMVDLLGR+G ++EA E I++MP+EP+A V GALL C++H K +L
Sbjct: 434 STIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVEL 493
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E V+ ++ +EP G YVL+SNIYS++++W DA K+R M ++ ++K GCS +E+DG
Sbjct: 494 GESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDG 553
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
V+HEF GD SHP ++IY LDE+ + LK
Sbjct: 554 VIHEFQKGDKSHPKIKEIYKLLDEIMSHLK 583
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/607 (36%), Positives = 364/607 (59%), Gaps = 8/607 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + + ++ MR G + F LK C+++ + + H +VK G
Sbjct: 277 MIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNG 336
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINM 118
+ + ++T+L+ Y C + +A K+F + D NVV+WTA+I G++ N ++A+++
Sbjct: 337 YEFAQDIRTALMVTYSKCSSVDEAFKLFS-MADAAHNVVTWTAMIGGFVQNNNNKKAVDL 395
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++ G++P+ F+ VL S +H + +A + VAT+L+D Y K
Sbjct: 396 FCQMSREGVRPNHFTYSTVLAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVK 451
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
GN+ ++ RVF +P KDIV+WS+M+ G A ++A+++F + +E +KP YT V
Sbjct: 452 TGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSV 511
Query: 239 LSACASLGA-LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
++AC+S A +E G + ++ + + + L+ MY+K G + A KVF +++D
Sbjct: 512 INACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERD 571
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WN++++G +G K A VF ++ G+ + TF+G+L CTHAGLV+EG ++FN
Sbjct: 572 IVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFN 631
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
M + + + EHY CMVDL R+G D+A ++I MP + +W LLA CR+H+
Sbjct: 632 IMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNL 691
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
+L + +L++L+P ++ YVLLSNI++ + W + A +R +M ++ ++K GCSW+E+
Sbjct: 692 ELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEI 751
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
+ FL GD SHP S+ +Y+KL+EL+ KLK G+ P T++V D+EEE K+ L+ HS
Sbjct: 752 KNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHS 811
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
E+LA+A+GLI P I+I KNLR+CGDCH I+LIS I R +IVRD+NRFH F G
Sbjct: 812 ERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGV 871
Query: 598 CSCKDFW 604
CSC +W
Sbjct: 872 CSCGGYW 878
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 208/418 (49%), Gaps = 12/418 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N I N M+ EG P FTF VL A A E + GV+ H++IVK G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +L+ +Y+ + DA VFD + ++ V+W +I GY G E MF
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+K L C+Q +L+ K +H V + G + T+L+ Y+KC
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355
Query: 181 NMEKARRVFDQM-PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++++A ++F ++V+W++MI G+ N K+A+D+F M RE ++P ++T VL
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL 415
Query: 240 SACAS--LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+ S L L + + + + P + T L+D Y K G + ++ +VF + KD
Sbjct: 416 AGKPSSLLSQLHAQIIKAYYEKV------PSVATALLDAYVKTGNVVESARVFYSIPAKD 469
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC-THAGLVDEGRQFF 356
V W+A+++GL+ + A VF QL K G++PN TF ++ C + A V+ G+Q
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + + ++ + + G ++ A E + + E + + W +++ G H
Sbjct: 530 ATAVKSGKSNALCVS-SALLTMYSKKGNIESA-EKVFTRQEERDIVSWNSMITGYGQH 585
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 196/426 (46%), Gaps = 9/426 (2%)
Query: 5 FVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCD 64
F N+ + A+ + + + G T LK C D +G + H +K+G D
Sbjct: 79 FSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLED 138
Query: 65 EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
V TSL+++Y+ D +FD++ KNVVSWT+++SGY G +E I++ ++
Sbjct: 139 VSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQM 198
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G+ P+ F+ VL A + +H + + G FV +L+ +Y K +
Sbjct: 199 EGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGD 258
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
A VFD M +D V+W+ MI GYA+ GF E MF+ M+ +K L C+
Sbjct: 259 AEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQ 318
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD--KDQVVWN 302
L + +N + + T L+ Y+KC + +A K+F M D + V W
Sbjct: 319 QRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLF-SMADAAHNVVTWT 377
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
A++ G N K A +F Q+ + G++PN T+ +L G + L Q +
Sbjct: 378 AMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAY--- 434
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ P + ++D ++G + E+ + S+P + + + W A+L G + ++ A
Sbjct: 435 YEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DIVAWSAMLTGLAQTRDSEKAME 491
Query: 423 VLNQLI 428
V QL+
Sbjct: 492 VFIQLV 497
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 154/338 (45%), Gaps = 23/338 (6%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A ++FD+ P K++ + ++ + + EA+++F+ L GL D ++ L C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L D + +H ++G +V V TSLVD+Y K + E R +FD+M K++VSW+S+
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
+ GYA NG E + + MQ E + P +T VL A A +E GV + + +N F
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ LI MY K + A VF M +D V WN ++ G + G+ F +F +
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 324 LEKCGIQPNGNTFVGLLCGCT-----------HAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ G++ + F L C+ H G+V G +F + +T
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT------ 350
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ +DEA +L N + W A++ G
Sbjct: 351 ------YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/608 (39%), Positives = 362/608 (59%), Gaps = 17/608 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE--GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
M+ G+ + + HA+ SM+ + P T +L A++ G H+ ++
Sbjct: 82 MLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIR 141
Query: 59 AGLDCDE----------FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
A L + + T+LL++Y CG L A +VFD +P +N V+W+A+I G++
Sbjct: 142 ACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 201
Query: 109 EGNLEEAINMFRRLLHRGL---KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+ +A +F+ +L +GL P S I L AC L L + +H + ++G +
Sbjct: 202 CSRMTQAFLLFKAMLAQGLCFLSPTS--IASALRACASLDHLRMGEQLHALLAKSGVHAD 259
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
+ SL+ +YAK G +++A +FD+M KD VS+S+++ GY NG +EA +F MQ
Sbjct: 260 LTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 319
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
N++P+ TMV ++ AC+ L AL+ G + + S + LIDMYAKCGR+
Sbjct: 320 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 379
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
+ +VF M +D V WN +++G ++G K A +F ++ G P+G TF+ LL C+H
Sbjct: 380 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 439
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
+GLV EG+ +F+ M + LTP +EHY CMVDLL R G LDEA+E I+SMP+ + VW
Sbjct: 440 SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 499
Query: 406 ALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKG 465
ALL CR++K DL + V + L P +GN+VLLSNIYSA+ ++++AA++R + +G
Sbjct: 500 ALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG 559
Query: 466 IQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIE 525
+K GCSW+E++G +H F+ GD SHP S +IY +LD + +K G+ P T VL D+E
Sbjct: 560 FKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLE 619
Query: 526 EEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVR 585
EEEK+ L CHSEKLA+A+G+++ + I + KNLRVCGDCH IK IS + R IIVR
Sbjct: 620 EEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVR 679
Query: 586 DNNRFHCF 593
D NRFH F
Sbjct: 680 DANRFHHF 687
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 215/403 (53%), Gaps = 21/403 (5%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P N+TFPF LKAC+ D G H + AGL D FV T+LL++YV C L DA +
Sbjct: 8 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL---LHRGLKPDSFSIVRVLTACTQL 144
F +P +++V+W A+++GY + G A+ + +HR L+P++ ++V +L Q
Sbjct: 68 FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR-LRPNASTLVALLPLLAQQ 126
Query: 145 GDLSTAKWIHGYV-------NEAGKGR---NVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
G L+ +H Y N K + V + T+L+D+YAKCG++ ARRVFD MP
Sbjct: 127 GALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA 186
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQREN---LKPEYYTMVGVLSACASLGALELG 251
++ V+WS++I G+ +A +F M + L P ++ L ACASL L +G
Sbjct: 187 RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMG 244
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + ++ ++ G +L+ MYAK G + QA +F EM KD V ++A+VSG N
Sbjct: 245 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 304
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G + AF VF +++ C ++P+ T V L+ C+H + GR S+ + L
Sbjct: 305 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSI 363
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++D+ + G++D + ++ MP + + W ++AG +H
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIH 405
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 157/341 (46%), Gaps = 57/341 (16%)
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
L HR + P++++ L AC+ L D + IH + AG ++FV+T+L+D+Y KC
Sbjct: 2 LRHR-VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVL 239
+ A +F MP +D+V+W++M+ GYA +G A+ +MQ + L+P T+V +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 240 SACASLGALELGVWASSFMER----------NEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
A GAL G ++ R ++ +LGT L+DMYAKCG + A +V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF---------------------------- 321
F M +++V W+A++ G + + AF +F
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 322 --------GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
L K G+ + LL AGL+D+ F+ M+ +++ Y
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS-----YS 295
Query: 374 CMVDLLGRSGQLDEAHELIKSMP---MEPNAIVWGALLAGC 411
+V ++G+ +EA + K M +EP+A +L+ C
Sbjct: 296 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 336
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/526 (40%), Positives = 326/526 (61%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G++A A +F N+ W II GY + AI +++ + G+ P+S++ VL
Sbjct: 15 GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVL 74
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
AC +L L + +H + +AG + L+ LYA CG M+ A +FD+MPE D
Sbjct: 75 NACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSA 134
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
SWS+M+ GY+ NG E L + MQ EN+ + +T+ V+ C LG L+LG W S++
Sbjct: 135 SWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYI 194
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
++ + VLGT L+ MY+KCG + A KVF+ M ++D W+ +++G +++G+ + A
Sbjct: 195 DKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKAL 254
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
+F +++ I PN TF +L +H+GLV++G Q F +M + +TP I+HYGCMVDL
Sbjct: 255 QLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDL 314
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNY 438
R+G + AH+ I++MP+EPN ++W LL C+ H L EH+ +++ L+P + NY
Sbjct: 315 FCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENY 374
Query: 439 VLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIY 498
V +SN+Y++ +W+ ++RS+M +K +K G S +E++ +VH+F++G+ SHP EKIY
Sbjct: 375 VFVSNVYASLGRWSSVCQVRSLMKEKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKIY 434
Query: 499 SKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIA 558
L ++A KLK G V +T VL DI+EEEK+Y L HSE+LA+A+GL+ T IRI
Sbjct: 435 GMLHQMARKLKQVGHVASTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIV 494
Query: 559 KNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLR C DCHE IKLIS++ REII+RD FH F E CSC D+W
Sbjct: 495 KNLRACRDCHEVIKLISEVYNREIILRDRVCFHHFRERGCSCNDYW 540
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 169/316 (53%), Gaps = 4/316 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ +D AI Y M G P ++TF FVL AC + G HS IVKAG
Sbjct: 38 IIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNACCKLLRLCEGQELHSQIVKAG 97
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + + L+ LY CG + A +FD++P+ + SW+ ++SGY G E + + R
Sbjct: 98 LDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLR 157
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + D+F++ V+ C LG L KW+H Y+++ G +V + T+LV +Y+KCG
Sbjct: 158 EMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCG 217
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A +VF M E+D+ +WS MI GYA +G ++AL +F M+R + P T VLS
Sbjct: 218 SLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLS 277
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKD 297
A + G +E G M E+ P + ++D++ + G + A K + M + +
Sbjct: 278 AYSHSGLVEKGHQIFETM-WTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPN 336
Query: 298 QVVWNAVVSGLSMNGY 313
V+W ++ +GY
Sbjct: 337 VVLWRTLLGACKTHGY 352
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/590 (41%), Positives = 346/590 (58%), Gaps = 37/590 (6%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY-INE 109
++H+ ++ L LL L C L+ A K+FD IP ++ + +I + ++
Sbjct: 34 QTHAQLITTALISHPVSANKLLKLAA-CASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSP 92
Query: 110 GNLEEAINMFRRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
+ ++ +FR L GL P+ +S V +AC + + + + + G NVFV
Sbjct: 93 HSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFV 152
Query: 169 ATSLVDLYAK-------------------------------CGNMEKARRVFDQMPEKDI 197
+L+ +Y K GNM A+ +FD M E+D+
Sbjct: 153 VNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDV 212
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF 257
VSWS++I GY G EALD F+ M + KP YT+V L+AC++L AL+ G W ++
Sbjct: 213 VSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAY 272
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV-VWNAVVSGLSMNGYVKV 316
+ + E N L ++IDMYAKCG + A +VF E K K +V +WNA++ G +M+G
Sbjct: 273 IGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNE 332
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A VF Q++ I PN TF+ LL C+H +V+EG+ +F M +++TP IEHYGCMV
Sbjct: 333 AINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMV 392
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSG 436
DLL RSG L EA ++I SMPM P+ +WGALL CR++K + + + ++P + G
Sbjct: 393 DLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKGMDPNHIG 452
Query: 437 NYVLLSNIYSASHKWNDAAKIRSMMG-DKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSE 495
+VLLSNIYS S +WN+A +R + +KI GCS +E+ G H+FLVGD SHP S
Sbjct: 453 CHVLLSNIYSTSGRWNEARILREKNEISRDRKKIPGCSSIELKGTFHQFLVGDQSHPQSR 512
Query: 496 KIYSKLDELATKLKAAGFVPTTDHVLFDI-EEEEKQYFLACHSEKLALAFGLITTAPKDV 554
+IYS LDE+ TKLK+AG+VP +L DI +EE+K+ L+ HSEKLA+AFGL+ TA
Sbjct: 513 EIYSFLDEMTTKLKSAGYVPELGELLHDIDDEEDKETALSVHSEKLAIAFGLMNTANGTP 572
Query: 555 IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI KNLRVCGDCH+A K ISK+ R IIVRD R+H F +G CSCKD+W
Sbjct: 573 IRIVKNLRVCGDCHQATKFISKVYNRVIIVRDRTRYHHFEDGICSCKDYW 622
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 180/359 (50%), Gaps = 36/359 (10%)
Query: 8 NDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACA-----------REHDFQLGVRSHSLI 56
+ C I F + ++ G P ++F F AC R H ++G+ ++ +
Sbjct: 93 HSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFV 152
Query: 57 VKA--------------------GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
V A +D D + +L+ YV G ++ A ++FD + +++V
Sbjct: 153 VNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDV 212
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
VSW+ II+GY+ G EA++ F ++L G KP+ +++V L AC+ L L KWIH Y
Sbjct: 213 VSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAY 272
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRV-FDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ + N + S++D+YAKCG +E A RV F+ ++ + W++MI G+A +G P E
Sbjct: 273 IGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNE 332
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT-TLI 274
A+++F M+ E + P T + +L+AC+ +E G M + ++ + ++
Sbjct: 333 AINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMV 392
Query: 275 DMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
D+ ++ G + +A + M D +W A+++ + ++ + + G++ K G+ PN
Sbjct: 393 DLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDMERGYRI-GRIIK-GMDPN 449
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 42/296 (14%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+V CF A++F++ M G P +T L AC+ G H+ I K
Sbjct: 218 IIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGE 277
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKV-FDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ +E + S++++Y CG + A +V F+ + V W A+I G+ G EAIN+F
Sbjct: 278 IKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVF 337
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ + P+ + + +L AC+ HGY+ E GK LY +
Sbjct: 338 EQMKVEKISPNKVTFIALLNACS-----------HGYMVEEGK------------LYFRL 374
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
V D +I + M+ + +G KEA DM +M + P+ +L
Sbjct: 375 -------MVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMP---MAPDVAIWGALL 424
Query: 240 SACASLGALELGVWASSF---MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+AC +E G M+ N + +L ++Y+ GR +A ++ RE
Sbjct: 425 NACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLS----NIYSTSGRWNEA-RILRE 475
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/543 (38%), Positives = 336/543 (61%), Gaps = 36/543 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+ F N F+ A+ + +R EG P NFT+PFV KA + + G + + +VK+G
Sbjct: 103 VIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSG 162
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D +V SL+++Y G + + +VF+++P ++VVSW +ISGY+ E+A+++FR
Sbjct: 163 LEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFR 222
Query: 121 RLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ + L+P+ ++V L+AC L L K IH YV E G + + +LVD+Y KC
Sbjct: 223 RMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQ-LGFTIKIGNALVDMYCKC 281
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYAS--------------------------NGFP 213
G++ AR +F+ MP K ++ W+SM+ GY + NG+
Sbjct: 282 GHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYV 341
Query: 214 K-----EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+ +A+ +F MQ + + P+ +T+V +L+ CA LG LE G W +++ N+ + + V
Sbjct: 342 QFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAV 401
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+GT LI+MYAKCG + ++ ++F +K+KD W +++ GL+MNG A +F ++ + G
Sbjct: 402 VGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTG 461
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
++P+ TF+G+L C+H GLV+EGR+ F SM+ V+ + P +EHYGC++DLLGR+GQLDEA
Sbjct: 462 VKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEA 521
Query: 389 HELIKSMPMEPNAIV---WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
ELI+ P N ++ +GALL+ CR H ++ E V +L+ +E +S + LL+NIY
Sbjct: 522 EELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIY 581
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+++ +W D K+R M D G++K+ GCS VEV+G+VHEFLVGD SHP +IYS LD +A
Sbjct: 582 ASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIA 641
Query: 506 TKL 508
L
Sbjct: 642 KPL 644
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 196/382 (51%), Gaps = 35/382 (9%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G L A ++F+ I + + +I + G+ +A+ +FR+L GL PD+F+ V
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
A LG++ + ++G+V ++G + +V SL+D+YA+ G ++ R+VF++MP++D+V
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSF 257
SW+ +I GY ++A+D+F MQ++ +L+P T+V LSAC +L LELG +
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRY 259
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL--------- 308
+ R + +G L+DMY KCG ++ A ++F +M K + W ++VSG
Sbjct: 260 V-REQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEA 318
Query: 309 -----------------SMNGYVKV-----AFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
+NGYV+ A +F +++ + P+ T V LL GC
Sbjct: 319 RELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQL 378
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
G +++G+ + + + ++++ + G ++++ E+ + E + W +
Sbjct: 379 GTLEQGKWIHGYIDENKIMIDAVVGTA-LIEMYAKCGFIEKSLEIFNGLK-EKDTASWTS 436
Query: 407 LLAGCRLHKKTDLAEHVLNQLI 428
++ G ++ KT A + +++
Sbjct: 437 IICGLAMNGKTSKALELFAEMV 458
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/568 (39%), Positives = 338/568 (59%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
L+ CA+ +G H L + GL D L+NLY CG A VFD + +++
Sbjct: 64 LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
VSW +I+GY + G +A+ +F R+ G F++ + AC ++ K +H
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+ N FV T+++D+YAKC ++ A VF++MPE+ +V+WSS+ GY NG +EA
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEA 243
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
L +F QRE ++ +T+ +LSACASL G+ + + + F N + +L+D+
Sbjct: 244 LHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDV 303
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
YA+CG++ +A +F M+ K+ V+WNA+++ S + + A +F ++++ GI PN T+
Sbjct: 304 YARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTY 363
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
+ +L C+HAGLV++GR +F+ + ++ P + HY CMVD+LGRSG+ DEA EL+ MP
Sbjct: 364 LSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMP 423
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAK 456
EP A +WG+LL CR + LA QL LEP N GN+VLLSN+Y+AS W +
Sbjct: 424 FEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLM 483
Query: 457 IRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
R + D G +K G SW+E G VH F+VG+ HP IY+KL+E+ +++ +
Sbjct: 484 ARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTS 543
Query: 517 TDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISK 576
+ L D+ E+K+ L HSEKLAL+FGLI+ I I KNLR+CGDCH +K+ +
Sbjct: 544 IECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAH 603
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IT R +IVRD NRFH F +GSCSC DFW
Sbjct: 604 ITERLVIVRDTNRFHHFKDGSCSCGDFW 631
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 177/336 (52%), Gaps = 2/336 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A++ ++ M EG + FT + ACA ++ + H++ +K
Sbjct: 129 MIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLA 188
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + FV T++L++Y C + DA VF+ +P++ +V+W+++ +GY+ G EEA+++FR
Sbjct: 189 LDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFR 248
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
G++ F++ +L+AC L +H + + G N FVA SLVD+YA+CG
Sbjct: 249 CAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCG 308
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+EKA +F M K++V W++MI ++ + EA+ +F MQ+ + P T + VLS
Sbjct: 309 QIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLS 368
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
C+ G +E G S + + + VL + ++D+ + G+ +A ++ +M +
Sbjct: 369 VCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTA 428
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+W +++ +++A QL + GN
Sbjct: 429 SMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGN 464
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 137/289 (47%), Gaps = 4/289 (1%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
D +I + L C + L K HG G + L++LY KCG + AR VF
Sbjct: 56 DVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVF 115
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D M + IVSW++MI GY +G +AL +F M RE +T+ + ACA+ A+
Sbjct: 116 DIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAIN 175
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
+ + SN +GT ++D+YAKC + AC VF +M ++ V W+++ +G
Sbjct: 176 ECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYV 235
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPM 368
NG + A +F ++ G++ T +L C L EG Q + + F
Sbjct: 236 QNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFF 295
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
+ +VD+ R GQ+++A+ L M N ++W A++A H +
Sbjct: 296 VA--ASLVDVYARCGQIEKAYALFAYME-HKNVVIWNAMIASFSRHAHS 341
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/523 (40%), Positives = 339/523 (64%), Gaps = 4/523 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYI-NEGNLEEAINMFRRLLHRGL-KPDSFSIVRVLTAC 141
A K+F IP+ + ++ ++I G + + +E I++F+ ++ +G P++F++ VL AC
Sbjct: 43 ARKIFSQIPNPGIFAYNSVIRGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFTMAFVLKAC 102
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+ + L K IH + +G + +V +SLV+ Y+KC + AR+VFD++ E+++V WS
Sbjct: 103 SIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEITERNLVCWS 162
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+M+ GYA G EAL MF MQ ++P+ ++VGVLSACA +GAL++G W +++++
Sbjct: 163 AMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKR 222
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
+ L T LI+MYAKCG + +A ++F EM+ KD W++++ GL+++G + A VF
Sbjct: 223 MIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVF 282
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++E+ +PN TF+G+L C H GLV +G+++++SM + P +EHYGCMVDLL R
Sbjct: 283 SRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSMLE-LGIEPSMEHYGCMVDLLCR 341
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
G +DEA++ +P P+ ++W LL ++ AE V +L+ LEPW + NY++L
Sbjct: 342 GGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVAGKLLELEPWKAENYIIL 400
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
+N+Y++ + + +R MM + GI+ + GC+ +EVDG VH F+ GD SHP +E+I L
Sbjct: 401 ANLYASVSQLEKVSHVRKMMKENGIKALPGCTSIEVDGFVHNFVTGDWSHPEAEEIKKTL 460
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
++A K+ +G+ P VL + +EEK+ L HSE+LA+A+GL+ T IRI KNL
Sbjct: 461 RDVALKILISGYKPFVSVVLHLVNDEEKENVLYEHSERLAIAYGLMKTKAPATIRIVKNL 520
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
RVCGDCHE K+ISKI REIIVRD RFH F+ G+CSCKD+W
Sbjct: 521 RVCGDCHEVTKIISKIYDREIIVRDRVRFHKFVNGTCSCKDYW 563
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/315 (35%), Positives = 182/315 (57%), Gaps = 3/315 (0%)
Query: 12 QHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
+ I + M +G+ P FT FVLKAC+ + G + H+ I+++G +V++S
Sbjct: 73 KEPIHLFKDMVGKGYPNPNTFTMAFVLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSS 132
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+N Y C + A KVFD+I ++N+V W+A++SGY G + EA+ MFR + G++PD
Sbjct: 133 LVNFYSKCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPD 192
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S+V VL+AC +G L KW+H Y+ + ++ + T+L+++YAKCG +EKAR +FD
Sbjct: 193 EVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFD 252
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M KD +WSSMI G A +G ++AL++F M+ KP + T +G+LSACA G +
Sbjct: 253 EMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSD 312
Query: 251 GV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + SS +E S G ++D+ + G + +A + D V+W ++ +
Sbjct: 313 GKRYWSSMLELGIEPSMEHYG-CMVDLLCRGGLIDEAYDFALIIPTPDPVIWRTLLVAYT 371
Query: 310 MNGYVKVAFGVFGQL 324
N ++ A V G+L
Sbjct: 372 KNRMLQKAEMVAGKL 386
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 149/271 (54%), Gaps = 8/271 (2%)
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP-KEALDMFYNMQRENL-KPEYYTMVG 237
GN + AR++F Q+P I +++S+I+G P KE + +F +M + P +TM
Sbjct: 38 GNFDYARKIFSQIPNPGIFAYNSVIRGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFTMAF 97
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
VL AC+ + ALE G + + R+ F S+P + ++L++ Y+KC + A KVF E+ +++
Sbjct: 98 VLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEITERN 157
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V W+A+VSG + G + A +F +++ GI+P+ + VG+L C G +D G+ + +
Sbjct: 158 LVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGK-WVH 216
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
+ + + +E ++++ + G +++A E+ M ++ ++ W +++ G +H
Sbjct: 217 AYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVK-DSKAWSSMIVGLAIH--- 272
Query: 418 DLAEHVLNQLIALEPWNSG-NYVLLSNIYSA 447
LAE LN +E + N+V I SA
Sbjct: 273 GLAEDALNVFSRMEEAQAKPNHVTFIGILSA 303
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 7/278 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ A+ + M+ G P + VL ACA +G H+ I K
Sbjct: 164 MVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRM 223
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D + T+L+N+Y CG + A ++FD++ K+ +W+++I G G E+A+N+F
Sbjct: 224 IHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFS 283
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ KP+ + + +L+AC G +S K + E G ++ +VDL + G
Sbjct: 284 RMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSMLELGIEPSMEHYGCMVDLLCRGG 343
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN--MQRENLKPEYYTMVGV 238
+++A +P D V W +++ Y N ++A +M ++ E K E Y ++
Sbjct: 344 LIDEAYDFALIIPTPDPVIWRTLLVAYTKNRMLQKA-EMVAGKLLELEPWKAENYIILAN 402
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
L AS+ LE M+ N + P G T I++
Sbjct: 403 LY--ASVSQLEKVSHVRKMMKENGIKALP--GCTSIEV 436
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/522 (40%), Positives = 326/522 (62%), Gaps = 1/522 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A +FD + + ++V + +I GY N E N+F +L L PD+++ +L AC
Sbjct: 84 ARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAV 143
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L + +H + G NV+V +L+++Y +C +++ AR VFD++ E +V +++M
Sbjct: 144 AKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAM 203
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I GYA P EAL +F MQ +NLKP T++ VLS+CA LG+L+LG W + +++ F
Sbjct: 204 ITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGF 263
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ T LIDM+AKCG + A +F M+ KD W+A++ + +G + + +F +
Sbjct: 264 CKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFER 323
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
+ +QP+ TF+GLL C+H GLV+EGR++F+ M F + P I+HYG MVDLLGR+G
Sbjct: 324 MRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAG 383
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
L++A+E I +P+ P ++W LLA C H +LAE V +++ L+ + G+YV+LSN
Sbjct: 384 HLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSN 443
Query: 444 IYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDE 503
+Y+ + KW +R +M D+ K+ GCS +EV+ VVHEF GD + K++ LDE
Sbjct: 444 LYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 503
Query: 504 LATKLKAAGFVPTTDHVLF-DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
+ +LK AG+VP T V+ D+ ++EK+ L HSEKLA+AFGL+ T P IR+ KNLR
Sbjct: 504 MVKELKLAGYVPDTSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLR 563
Query: 563 VCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
VC DCH A KLIS I GR++++RD RFH F +G CSC+DFW
Sbjct: 564 VCRDCHSAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 181/321 (56%), Gaps = 4/321 (1%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLD 62
RG+ + + + + LP N+TFP +LKACA + G + H L +K G+D
Sbjct: 104 RGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVD 163
Query: 63 CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL 122
+ +V +L+N+Y C + A VFD I + VV + A+I+GY EA+++FR +
Sbjct: 164 DNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM 223
Query: 123 LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
+ LKP+ +++ VL++C LG L KWIH Y + G + V V T+L+D++AKCG++
Sbjct: 224 QGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSL 283
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
+ A +F+ M KD +WS+MI YA++G + ++ MF M+ EN++P+ T +G+L+AC
Sbjct: 284 DDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNAC 343
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKDQV 299
+ G +E G S+M +EF P + +++D+ + G + A + ++ +
Sbjct: 344 SHTGLVEEGREYFSWM-VHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPM 402
Query: 300 VWNAVVSGLSMNGYVKVAFGV 320
+W +++ S + +++A V
Sbjct: 403 LWRILLAACSSHNNLELAEKV 423
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A+ + M+ + P T VL +CA LG H K G
Sbjct: 203 MITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHG 262
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
V T+L++++ CG L DA+ +F+++ K+ +W+A+I Y N G E ++ MF
Sbjct: 263 FCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFE 322
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ ++PD + + +L AC+ G + + + V+E G ++ S+VDL +
Sbjct: 323 RMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRA 382
Query: 180 GNMEKARRVFDQMP 193
G++E A D++P
Sbjct: 383 GHLEDAYEFIDKLP 396
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/608 (39%), Positives = 357/608 (58%), Gaps = 41/608 (6%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC--GYLADALKVFDDIP 92
F L++C + + ++H+ ++ GL LL + + G L+ A ++FD IP
Sbjct: 20 FSLESCKSMNQIK---QTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIP 76
Query: 93 DKNVVSWTAIISGY-INEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTA 150
+V + +I + + + ++ +F ++ G P+ ++ V V AC +
Sbjct: 77 KPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEG 136
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD-------------------- 190
+ I + + G N+FV +++ +YA G +++ARRVFD
Sbjct: 137 EQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGS 196
Query: 191 -----------QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+M E+D+VSW+++I GY G KEALD+F+ M + P +T+ L
Sbjct: 197 GEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASAL 256
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+ACA+L AL+ G W +++++E N L +L+DMYAKCG + A KVF +
Sbjct: 257 AACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK 316
Query: 300 VW--NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
VW NA++ G +M+G K A +F Q++ + PN TFV LL C+H LV+EGR +F
Sbjct: 317 VWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFK 376
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
SM+ + + P IEHYGCMVDLLGRSG L EA E + +MPM P+A +WGALL CR+HK
Sbjct: 377 SMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDI 436
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
+ + + + L+ + G +VLL+N+YSAS +W++A +R + G +K GCS +E+
Sbjct: 437 ERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIEL 496
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI-EEEEKQYFLACH 536
+GV H+FLVGD SHP ++++Y LDE+ TKLK AG+VP VL DI +EE+K+ L+ H
Sbjct: 497 NGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKH 556
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEKLA+AFGLI T P IRI KNLRVC DCHEA K ISK+ REIIVRD R+H F +G
Sbjct: 557 SEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDG 616
Query: 597 SCSCKDFW 604
CSCKD+W
Sbjct: 617 FCSCKDYW 624
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 165/328 (50%), Gaps = 43/328 (13%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACA-----------REHDFQLGVRSHSLIVKA------ 59
F + +R GFLP +TF FV KAC R H ++G+ S+ + A
Sbjct: 104 FLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYA 163
Query: 60 --------------GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISG 105
LD D + ++ YV G + A ++FD++ +++VVSWT II+G
Sbjct: 164 NWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAG 223
Query: 106 YINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
Y+ G +EA+++F +L G P+ F++ L AC L L +WIH Y++++ N
Sbjct: 224 YVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMN 283
Query: 166 VFVATSLVDLYAKCGNMEKARRVF-DQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNM 223
+ SL+D+YAKCG ++ A +VF D+ K + W++MI GYA +G KEA+D+F M
Sbjct: 284 ERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQM 343
Query: 224 QRENLKPEYYTMVGVLSACASLGALELG-----VWASSFMERNEFLSNPVLGTTLIDMYA 278
+ E + P T V +L+AC+ +E G ASS+ E ++D+
Sbjct: 344 KVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHY----GCMVDLLG 399
Query: 279 KCGRMAQACK-VFREMKDKDQVVWNAVV 305
+ G + +A + VF D +W A++
Sbjct: 400 RSGLLKEAEETVFNMPMAPDATIWGALL 427
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+V CF+ A++ ++ M G P FT L ACA G H I K+
Sbjct: 220 IIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSE 279
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINM 118
+ +E + SLL++Y CG + A KVF D V W A+I GY G +EAI++
Sbjct: 280 IKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDL 339
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS------- 171
F ++ + P+ + V +L AC+ HG + E G+G +A+S
Sbjct: 340 FEQMKVEKVSPNKVTFVALLNACS-----------HGKLVEEGRGYFKSMASSYGIEPEI 388
Query: 172 -----LVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+VDL + G +++A MP D W +++
Sbjct: 389 EHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALL 427
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/519 (41%), Positives = 316/519 (60%), Gaps = 4/519 (0%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MIR + + A+ ++ M + P NFTFPF +CA +HSL+ K
Sbjct: 92 MIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKL 151
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L D SL+ Y CG +A A KVFD+IP ++ VSW ++I+GY G EA+ +F
Sbjct: 152 ALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVF 211
Query: 120 RRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
R + R G +PD S+V +L AC +LGDL +W+ G+V E G N ++ ++L+ +YAK
Sbjct: 212 REMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAK 271
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG +E ARR+FD M +D+++W+++I GYA NG EA+ +F+ M+ + + T+ V
Sbjct: 272 CGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAV 331
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
LSACA++GAL+LG + + F + + T LIDMYAK G + A +VF++M K++
Sbjct: 332 LSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNE 391
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
WNA++S L+ +G K A +F + E G +PN TFVGLL C HAGLVDEG + F
Sbjct: 392 ASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLF 451
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+ MS +F L P IEHY CMVDLL R+G L EA +LI+ MP +P+ + GALL CR K
Sbjct: 452 DMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKN 511
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
D+ E V+ ++ ++P NSGNY++ S IY+ + W D+A++R +M KGI K GCSW+E
Sbjct: 512 VDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIE 571
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
V+ +HEF GD S + + +D L +LK G+VP
Sbjct: 572 VENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVP 610
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/583 (38%), Positives = 348/583 (59%), Gaps = 31/583 (5%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H +K D FV LL +Y Y+ A+K+F + NV +T++I G+++ G+
Sbjct: 47 HCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSY 106
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
+AIN+F +++ + + D++++ +L AC L + K +HG V ++G G + +A L
Sbjct: 107 TDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKL 166
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVS-------------------------------WS 201
V+LY KCG +E AR++FD MPE+D+V+ W+
Sbjct: 167 VELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWT 226
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+I G NG L++F MQ + ++P T V VLSACA LGALELG W ++M +
Sbjct: 227 MVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKC 286
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
N + LI+MY++CG + +A +F ++ KD +N+++ GL+++G A +F
Sbjct: 287 GVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELF 346
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ K ++PNG TFVG+L C+H GLVD G + F SM + + P +EHYGCMVD+LGR
Sbjct: 347 SEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGR 406
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
G+L+EA + I M +E + + +LL+ C++HK + E V L +SG++++L
Sbjct: 407 VGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIML 466
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
SN Y++ +W+ AA++R M GI K GCS +EV+ +HEF GD HP ++IY KL
Sbjct: 467 SNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKL 526
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+EL K G++P T+ L DI++E+K+ LA HSE+LA+ +GL++T +R+ KNL
Sbjct: 527 EELNYLTKFEGYLPATEVALHDIDDEQKELALAVHSERLAICYGLVSTEAYTTLRVGKNL 586
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH IKLI+KIT R+I+VRD NRFH F G CSCKD+W
Sbjct: 587 RICDDCHAMIKLIAKITRRKIVVRDRNRFHHFENGECSCKDYW 629
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 167/318 (52%), Gaps = 32/318 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GFVS + AI + M + L N+ +LKAC + G H L++K+G
Sbjct: 96 LIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSG 155
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS---------------------- 98
L D + L+ LY CG L DA K+FD +P+++VV+
Sbjct: 156 LGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFN 215
Query: 99 ---------WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
WT +I G + G + +FR + +G++P+ + V VL+AC QLG L
Sbjct: 216 EMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALEL 275
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+WIH Y+ + G N FVA +L+++Y++CG++++A+ +FD + KD+ +++SMI G A
Sbjct: 276 GRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLAL 335
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+G EA+++F M +E ++P T VGVL+AC+ G ++LG ME + V
Sbjct: 336 HGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVE 395
Query: 270 G-TTLIDMYAKCGRMAQA 286
++D+ + GR+ +A
Sbjct: 396 HYGCMVDILGRVGRLEEA 413
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 139/308 (45%), Gaps = 35/308 (11%)
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IH + + ++ FVA L+ +Y K ++ A ++F ++ ++S+I G+ S G
Sbjct: 46 IHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGS 105
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+A+++F M R+++ + Y + +L AC AL G + ++ + +
Sbjct: 106 YTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALK 165
Query: 273 LIDMYAKCGRM-------------------------------AQACKVFREMKDKDQVVW 301
L+++Y KCG + +A +VF EM +D V W
Sbjct: 166 LVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCW 225
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
V+ GL NG VF +++ G++PN TFV +L C G ++ GR M +
Sbjct: 226 TMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRK 285
Query: 362 V-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + G ++++ R G +DEA L + ++ + + +++ G LH K+ A
Sbjct: 286 CGVEVNRFVA--GALINMYSRCGDIDEAQALFDGVRVK-DVSTYNSMIGGLALHGKSIEA 342
Query: 421 EHVLNQLI 428
+ ++++
Sbjct: 343 VELFSEML 350
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/610 (38%), Positives = 368/610 (60%), Gaps = 7/610 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+ G+ ++ + HAI M++ G L P T +L A+ G H+ ++A
Sbjct: 172 MLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRA 231
Query: 60 GLDCDE---FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
L+ +E + T+LL++Y C L A +VF +P +N V+W+A+I G++ + EA
Sbjct: 232 CLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAF 291
Query: 117 NMFRRLLHRGL-KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
N+F+ +L GL + S+ L C L DL +H + ++G ++ + SL+ +
Sbjct: 292 NLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSM 351
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
YAK G + +A FD++ KD +S+ +++ G NG +EA +F MQ N++P+ TM
Sbjct: 352 YAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATM 411
Query: 236 VGVLSACASLGALELGVWA-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
V ++ AC+ L AL+ G + S + R L + +LIDMYAKCG++ + +VF +M
Sbjct: 412 VSLIPACSHLAALQHGKCSHGSVIIRGLALETSIC-NSLIDMYAKCGKIDLSRQVFDKMP 470
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+D V WN +++G ++G K A +F ++ G P+ TF+ L+ C+H+GLV EG+
Sbjct: 471 ARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKH 530
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+F++M+ + + P +EHY CMVDLL R G LDEA++ I+SMP++ + VWGALL CR+H
Sbjct: 531 WFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIH 590
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K DL + V + L P +GN+VLLSNI+SA+ ++++AA++R + KG +K G SW
Sbjct: 591 KNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSW 650
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+E++G +H F+ GD SHP S IY +LD + +K G+ T VL D+EEEEK+ L
Sbjct: 651 IEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALL 710
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFG+++ I + KNLRVCGDCH AIK ++ + R IIVRD NRFH F
Sbjct: 711 YHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFK 770
Query: 595 EGSCSCKDFW 604
G CSC +FW
Sbjct: 771 NGQCSCGNFW 780
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 219/420 (52%), Gaps = 9/420 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + F AI+ Y SM P +TFPFVLKAC+ D + G H+ AG
Sbjct: 71 LIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAG 130
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI-NMF 119
L D FV T+L++LY+ C A VF +P ++VV+W A+++GY N G AI ++
Sbjct: 131 LHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLL 190
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN---VFVATSLVDLY 176
H GL+P++ ++V +L Q G L IH Y A +N V + T+L+D+Y
Sbjct: 191 DMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMY 250
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
AKC + A RVF MP ++ V+WS++I G+ EA ++F +M E L T V
Sbjct: 251 AKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSV 310
Query: 237 G-VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
L CASL L +G + + ++ ++ +L+ MYAK G + +A F E+
Sbjct: 311 ASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAV 370
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
KD + + A++SG NG + AF VF +++ C ++P+ T V L+ C+H + G+
Sbjct: 371 KDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCS 430
Query: 356 FNS-MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
S + R +L I ++D+ + G++D + ++ MP + + W ++AG +H
Sbjct: 431 HGSVIIRGLALETSI--CNSLIDMYAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIH 487
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 201/430 (46%), Gaps = 59/430 (13%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALK 86
LP PF AR H G S+ + K + L ++ G LA A +
Sbjct: 3 LPRGHLRPFSAATAARLHRPPSGSISYEVKDKKQWQQE-------LEQHISRGQLALARQ 55
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
VFD IP + ++ A+I Y G AI+++R +L + P+ ++ VL AC+ L D
Sbjct: 56 VFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVD 115
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
L + IH + AG ++FV+T+L+DLY +C AR VF +MP +D+V+W++M+ G
Sbjct: 116 LRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAG 175
Query: 207 YASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSF-----MER 260
YA++G A+ +MQ L+P T+V +L A GAL G ++ +E+
Sbjct: 176 YANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQ 235
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
NE ++GT L+DMYAKC ++ AC+VF M ++ V W+A++ G + + AF +
Sbjct: 236 NE--EQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNL 293
Query: 321 FGQL------------------------------------EKCGIQPNGNTFVGLLCGCT 344
F + K GI + LL
Sbjct: 294 FKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYA 353
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP---MEPNA 401
AGL++E FF+ ++ +++ YG ++ ++G+ +EA + K M MEP+
Sbjct: 354 KAGLINEATMFFDEIAVKDTIS-----YGALLSGCVQNGKAEEAFLVFKKMQACNMEPDI 408
Query: 402 IVWGALLAGC 411
+L+ C
Sbjct: 409 ATMVSLIPAC 418
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/605 (39%), Positives = 356/605 (58%), Gaps = 18/605 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+RG+V + A + + M + ++ ++ +E + +I +
Sbjct: 120 MVRGYVQEGMVEEAEKLFWEMPRRNVV----SWTVMIGGLLKESRIDDAKKLFDMIPEK- 174
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V T+++ Y G L +A ++FD++ +NV +WT ++SGY G ++ A +F
Sbjct: 175 ---DVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFE 231
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ R + S +L TQ G + A + EA + + ++ + G
Sbjct: 232 VMPER----NEVSWTAMLMGYTQSGRMKEAFELF----EAMPVKWIVACNEMILQFGLAG 283
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
M +AR +F+ M E+D +W++MI+ + G EAL +F MQRE + + +M+ VLS
Sbjct: 284 EMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLS 343
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CASL +L+ G + + R+EF + + + LI MY KCG + +A +F KD V+
Sbjct: 344 VCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVM 403
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++++G S +G + A VF + G+QP+ TF+G+L C+++G V EG + F +M
Sbjct: 404 WNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMK 463
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + P IEHY CMVDLLGR+G++DEA EL++ MPMEP+AIVWGALL CR H K DLA
Sbjct: 464 CTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLA 523
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + +L LEP N+G YVLLS++Y+ +W D +R + + I K GCSW+EV+
Sbjct: 524 EVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVI-KFPGCSWIEVEKK 582
Query: 481 VHEFLVGDN-SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F GD+ SHP I L++L+ L+ AG+ P VL D++EEEK + L HSE+
Sbjct: 583 VHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSER 642
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GL+ IR+ KNLRVCGDCH AIKLI+K+TGREII+RD NRFH F +GSCS
Sbjct: 643 LAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCS 702
Query: 600 CKDFW 604
CKDFW
Sbjct: 703 CKDFW 707
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 174/388 (44%), Gaps = 87/388 (22%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL--- 127
+++ YV G +ADA KVFD +P++NVVSWT+++ GY+ EG +EEA +F + R +
Sbjct: 89 MISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSW 148
Query: 128 ------------------------KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG 163
+ D + ++ Q+G L A+ + + K
Sbjct: 149 TVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELF----DEMKV 204
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
RNVF T++V YAK G ++ AR++F+ MPE++ VSW++M+ GY +G KEA ++F M
Sbjct: 205 RNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAM 264
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
V + AC NE +I + G M
Sbjct: 265 P-----------VKWIVAC------------------NE----------MILQFGLAGEM 285
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
+A +F MK++D+ WNA++ G A G+F ++++ G+ N + + +L C
Sbjct: 286 HRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVC 345
Query: 344 THAGLVDEGRQFFNSMSR------VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
+D GRQ + R ++ + +I Y DL+ G + L K
Sbjct: 346 ASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRF--LFK---- 399
Query: 398 EPNAIVWGALLAGCRLHKKTDLAEHVLN 425
+ ++W +++ G H L E LN
Sbjct: 400 --DVVMWNSMITGYSQH---GLGEEALN 422
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 151/344 (43%), Gaps = 63/344 (18%)
Query: 69 TSLLNLYVHCGYLADALKVFDD--IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 126
TS ++ Y G + +A KVFD+ +P + + SW A++S Y +A+ +F ++ R
Sbjct: 23 TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQR- 81
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
N ++ Y K G + AR
Sbjct: 82 --------------------------------------NTVSFNGMISGYVKNGMVADAR 103
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
+VFD MPE+++VSW+SM++GY G +EA +F+ M R N+ + G+L
Sbjct: 104 KVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDD 163
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
A +L + V+ T +I Y + GR+ +A ++F EMK ++ W +VS
Sbjct: 164 AKKLFDMIPE--------KDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVS 215
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G + NG V VA +F + + N ++ +L G T +G + E + F +M
Sbjct: 216 GYAKNGRVDVARKLFEVMP----ERNEVSWTAMLMGYTQSGRMKEAFELFEAM------- 264
Query: 367 PMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
P+ C M+ G +G++ A + + M E + W A++
Sbjct: 265 PVKWIVACNEMILQFGLAGEMHRARMMFEGMK-ERDEGTWNAMI 307
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 28/255 (10%)
Query: 162 KGRNVFVATSLVDLYAKCGNMEKARRVFDQ--MPEKDIVSWSSMIQGYASNGFPKEALDM 219
+ R++ TS + Y + G++ AR+VFD +P++ I SW++M+ Y + P++AL +
Sbjct: 15 QARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLL 74
Query: 220 FYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK 279
F M + N + G++S G + M N V T+++ Y +
Sbjct: 75 FDQMPQRNT----VSFNGMISGYVKNGMVADARKVFDVMPER----NVVSWTSMVRGYVQ 126
Query: 280 CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV-- 337
G + +A K+F EM ++ V W ++ GL + A +F + P + V
Sbjct: 127 EGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMI------PEKDVVVVT 180
Query: 338 GLLCGCTHAGLVDEGRQFFNSMS--RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
++ G G +DE R+ F+ M VF+ T M+ Y ++G++D A +L + M
Sbjct: 181 NMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGY-------AKNGRVDVARKLFEVM 233
Query: 396 PMEPNAIVWGALLAG 410
P E N + W A+L G
Sbjct: 234 P-ERNEVSWTAMLMG 247
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/600 (38%), Positives = 355/600 (59%), Gaps = 11/600 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ + +R F FT V+ AC D L + H +V G DC V ++L
Sbjct: 125 ALRLFAEVRELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLA 182
Query: 74 LYVHCGYLADALKVFDDIPD---KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
Y G+L +A +VF ++ + ++ VSW A+I EA+ +FR ++ RGLK D
Sbjct: 183 CYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVD 242
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC-GNMEKARRVF 189
F++ VLTA T + DL HG + ++G N V + L+DLY+KC G M + R+VF
Sbjct: 243 MFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVF 302
Query: 190 DQMPEKDIVSWSSMIQGYAS-NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
+++ D+V W++MI G++ ++ + F MQ P+ + V V SAC++L +
Sbjct: 303 EEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSP 362
Query: 249 ELGVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
+G + +++ N V + L+ MY+KCG + A +VF M + + V N++++G
Sbjct: 363 SVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAG 422
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
+ +G + +F + + I PN TF+ +L C H G V+EG+++FN M F + P
Sbjct: 423 YAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEP 482
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
EHY CM+DLLGR+G+L EA +I++MP P +I W LL CR H +LA N+
Sbjct: 483 EAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEF 542
Query: 428 IALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVG 487
+ LEP+N+ YV+LSN+Y+++ +W +AA ++ +M ++G++K GCSW+E+D VH F+
Sbjct: 543 LQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAE 602
Query: 488 DNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLF---DIEEEEKQYFLACHSEKLALAF 544
D SHP+ ++I+ + E+ K+K AG+VP L ++E +EK+ L HSEKLA+AF
Sbjct: 603 DTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAF 662
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
GLI+T I + KNLR+CGDCH AIKLIS ITGREI VRD +RFHCF EG CSC D+W
Sbjct: 663 GLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 189/419 (45%), Gaps = 39/419 (9%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA------- 84
TF +LKAC + D G H+L K+ + ++ LY CG L +A
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70
Query: 85 ------------------------LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+VFD+IP ++VS+ +I+ Y + G A+ +F
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ D F++ V+ AC D+ + +H +V G V +++ Y++ G
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKG 188
Query: 181 NMEKARRVFDQMPE---KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
+ +ARRVF +M E +D VSW++MI + EA+++F M R LK + +TM
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC-GRMAQACKVFREMKDK 296
VL+A + L G+ M ++ F N +G+ LID+Y+KC G M + KVF E+
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAP 308
Query: 297 DQVVWNAVVSGLSM-NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
D V+WN ++SG S + F +++ G P+ +FV + C++ G+Q
Sbjct: 309 DLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQV 368
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + +V + + G + +A + +MP E N + +++AG H
Sbjct: 369 HALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP-EHNMVSLNSMIAGYAQH 426
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 138/302 (45%), Gaps = 44/302 (14%)
Query: 1 MIRGFVS-NDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI GF D + I + M++ GF P + +F V AC+ +G + H+L +K+
Sbjct: 316 MISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKS 375
Query: 60 GLDCDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+ + V +L+ +Y CG + DA +VFD +P+ N+VS ++I+GY G E++ +
Sbjct: 376 DIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRL 435
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F +L + + P++ + + VL+AC G + +G+ F
Sbjct: 436 FELMLQKDIAPNTITFIAVLSACVHTGKVE-------------EGQKYF----------- 471
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
NM K R F PE + +S MI G KEA + M E+ T++G
Sbjct: 472 --NMMKER--FRIEPEAE--HYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLG- 524
Query: 239 LSACASLGALELGVWASSFMERNEFLS----NPVLGTTLIDMYAKCGRMAQACKVFREMK 294
AC G +EL V A+ NEFL N L +MYA R +A V R M+
Sbjct: 525 --ACRKHGNVELAVKAA-----NEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMR 577
Query: 295 DK 296
++
Sbjct: 578 ER 579
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 131/262 (50%), Gaps = 12/262 (4%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
NVF +L++ YAK + AR+VFD++P+ DIVS++++I YA G + AL +F ++
Sbjct: 74 NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
+ +T+ GV+ AC + L F+ + + ++ Y++ G +
Sbjct: 134 ELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLN 191
Query: 285 QACKVFREMKD---KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
+A +VFREM + +D+V WNA++ + A +F ++ + G++ + T +L
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLT 251
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC-MVDLLGR-SGQLDEAHELIKSMPMEP 399
T + G QF M + S H G ++DL + +G + E ++ + + P
Sbjct: 252 AFTCVKDLVGGMQFHGMMIK--SGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIA-AP 308
Query: 400 NAIVWGALLAGCRLHKKTDLAE 421
+ ++W +++G + DL+E
Sbjct: 309 DLVLWNTMISG--FSQYEDLSE 328
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/610 (38%), Positives = 368/610 (60%), Gaps = 7/610 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+ G+ ++ + HAI M++ G L P T +L A+ G H+ ++A
Sbjct: 172 MLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRA 231
Query: 60 GLDCDE---FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
L+ +E + T+LL++Y C L A +VF +P +N V+W+A+I G++ + EA
Sbjct: 232 CLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAF 291
Query: 117 NMFRRLLHRGL-KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
N+F+ +L GL + S+ L C L DL +H + ++G ++ + SL+ +
Sbjct: 292 NLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSM 351
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
YAK G + +A FD++ KD +S+ +++ G NG +EA +F MQ N++P+ TM
Sbjct: 352 YAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATM 411
Query: 236 VGVLSACASLGALELGVWA-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
V ++ AC+ L AL+ G + S + R L + +LIDMYAKCG++ + +VF +M
Sbjct: 412 VSLIPACSHLAALQHGKCSHGSVIIRGLALETSIC-NSLIDMYAKCGKIDLSRQVFDKMP 470
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+D V WN +++G ++G K A +F ++ G P+ TF+ L+ C+H+GLV EG+
Sbjct: 471 ARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKH 530
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+F++M+ + + P +EHY CMVDLL R G LDEA++ I+SMP++ + VWGALL CR+H
Sbjct: 531 WFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIH 590
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K DL + V + L P +GN+VLLSNI+SA+ ++++AA++R + KG +K G SW
Sbjct: 591 KNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSW 650
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+E++G +H F+ GD SHP S IY +LD + +K G+ T VL D+EEEEK+ L
Sbjct: 651 IEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALL 710
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFG+++ I + KNLRVCGDCH AIK ++ + R IIVRD NRFH F
Sbjct: 711 YHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFK 770
Query: 595 EGSCSCKDFW 604
G CSC +FW
Sbjct: 771 NGQCSCGNFW 780
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 219/420 (52%), Gaps = 9/420 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + F AI+ Y SM P +TFPFVLKAC+ D + G H+ AG
Sbjct: 71 LIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAG 130
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI-NMF 119
L D FV T+L++LY+ C A VF +P ++VV+W A+++GY N G AI ++
Sbjct: 131 LHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLL 190
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN---VFVATSLVDLY 176
H GL+P++ ++V +L Q G L IH Y A +N V + T+L+D+Y
Sbjct: 191 DMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMY 250
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
AKC + A RVF MP ++ V+WS++I G+ EA ++F +M E L T V
Sbjct: 251 AKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSV 310
Query: 237 G-VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
L CASL L +G + + ++ ++ +L+ MYAK G + +A F E+
Sbjct: 311 ASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAV 370
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
KD + + A++SG NG + AF VF +++ C ++P+ T V L+ C+H + G+
Sbjct: 371 KDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCS 430
Query: 356 FNS-MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
S + R +L I ++D+ + G++D + ++ MP + + W ++AG +H
Sbjct: 431 HGSVIIRGLALETSI--CNSLIDMYAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIH 487
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 201/430 (46%), Gaps = 59/430 (13%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALK 86
LP PF AR H G S+ + K + L ++ G LA A +
Sbjct: 3 LPRGHLRPFSAATAARLHRPPSGSISYEVKDKKQWQQE-------LEQHISRGQLALARQ 55
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
VFD IP + ++ A+I Y G AI+++R +L + P+ ++ VL AC+ L D
Sbjct: 56 VFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVD 115
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
L + IH + AG ++FV+T+L+DLY +C AR VF +MP +D+V+W++M+ G
Sbjct: 116 LRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAG 175
Query: 207 YASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSF-----MER 260
YA++G A+ +MQ L+P T+V +L A GAL G ++ +E+
Sbjct: 176 YANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQ 235
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
NE ++GT L+DMYAKC ++ AC+VF M ++ V W+A++ G + + AF +
Sbjct: 236 NE--EQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNL 293
Query: 321 FGQL------------------------------------EKCGIQPNGNTFVGLLCGCT 344
F + K GI + LL
Sbjct: 294 FKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYA 353
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP---MEPNA 401
AGL++E FF+ ++ +++ YG ++ ++G+ +EA + K M MEP+
Sbjct: 354 KAGLINEATMFFDEIAVKDTIS-----YGALLSGCVQNGKAEEAFLVFKKMQACNMEPDI 408
Query: 402 IVWGALLAGC 411
+L+ C
Sbjct: 409 ATMVSLIPAC 418
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/571 (38%), Positives = 343/571 (60%), Gaps = 5/571 (0%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
+ C + G + H+ +V AG ++ T L+ +Y CG L DA V D +P++NV
Sbjct: 42 ITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNV 101
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT--QLGDLSTAKWIH 154
VSWTA+ISGY EA ++F +L G +P+ F++ VLT+CT Q K +H
Sbjct: 102 VSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVH 161
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
+ + ++FV +SL+D+YA+ N+++ARRVFD +P +D+VS+++++ GY G +
Sbjct: 162 AFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDE 221
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
EAL++F + E ++ T +L+A + L +++ G + R E L +LI
Sbjct: 222 EALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLI 281
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNG 333
DMY+KCG++ + +VF M ++ V WNA++ G +G +F + C ++P+
Sbjct: 282 DMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFM--CDKVKPDS 339
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
T + +L G +H GLVDEG F+ + + S +HYGC++DLLGRSGQL++A LI+
Sbjct: 340 VTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQ 399
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWND 453
MP +P +WG+LL CR+H + E V +L +EP N+GNYV+LSNIY+A+ W D
Sbjct: 400 KMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKD 459
Query: 454 AAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF 513
++R +M K + K G SW+ +D V+H F + HP E I K++E+ +KAAGF
Sbjct: 460 VFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGF 519
Query: 514 VPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKL 573
VP VL D+++E+K+ L HSEKLA+ FGL++T I++ KNLR+C DCH K
Sbjct: 520 VPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKF 579
Query: 574 ISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+SK+ GREI +RD NRFH EG+C+C D+W
Sbjct: 580 VSKVYGREISLRDKNRFHLITEGACTCGDYW 610
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 3/206 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ + A+ + + NEG TF +L A + G + H LI++
Sbjct: 210 ILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRE 269
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L ++ SL+++Y CG L + +VFD++P+++VVSW A++ GY G E + +FR
Sbjct: 270 LPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFR 329
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVATSLVDLYAKC 179
+ + +KPDS +++ VL + G + + + V E N ++DL +
Sbjct: 330 FMCDK-VKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRS 388
Query: 180 GNMEKARRVFDQMPEKDIVS-WSSMI 204
G +EKA + +MP + + W S++
Sbjct: 389 GQLEKALLLIQKMPFQPTRAIWGSLL 414
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/593 (36%), Positives = 350/593 (59%), Gaps = 3/593 (0%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
+ F N + + P + F L AC+ + G++ H L+ K GL C ++VK++L+++
Sbjct: 102 VLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHM 161
Query: 75 YVHCGYLADALKVFDDIPDKNV---VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
Y C ++ AL+V D +P ++V S+ ++++ + G EEA+ + RR++ + D
Sbjct: 162 YSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDH 221
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+ V V+ C Q+ DL +H + G + FV + L+D+Y KCG + AR VFD
Sbjct: 222 VTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDG 281
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+ +++V W++++ Y NG+ +E+L++F M RE P YT +L+ACA + AL G
Sbjct: 282 LQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHG 341
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ +E+ F ++ ++ LI+MY+K G + + VF +M +D + WNA++ G S +
Sbjct: 342 DLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHH 401
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G K A VF + PN TF+G+L +H GLV EG + N + R F + P +EH
Sbjct: 402 GLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEH 461
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
Y CMV LL R+G LDEA +K+ ++ + + W LL C +H+ DL + ++ ++
Sbjct: 462 YTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMD 521
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P + G Y LLSN+Y+ + +W+ IR +M ++ I+K G SW+++ +H FL ++H
Sbjct: 522 PHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNH 581
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P S +IY K+ +L +K G+VP VL D+E+E+K+ +L+ HSEKLALA+GL+
Sbjct: 582 PESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPS 641
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI KNLR+C DCH A+KLISK+T R IIVRD NRFH F +GSC+C D W
Sbjct: 642 PAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 201/383 (52%), Gaps = 8/383 (2%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGL 127
SL++LYV CG L A +FD +P +NVVSW +++GY++ GN E + +F+ ++ +
Sbjct: 54 NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
P+ + L+AC+ G + HG + + G + +V ++LV +Y++C ++E A +
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173
Query: 188 VFDQMPEK---DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
V D +P + DI S++S++ +G +EA+++ M E + ++ T VGV+ CA
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
+ L+LG+ + + R + + +G+ LIDMY KCG + A VF +++++ VVW A+
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
++ NGY + + +F +++ G PN TF LL C + G + ++
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGF 353
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+I ++++ +SG +D ++ + M + + I W A++ G H A V
Sbjct: 354 KNHVIVR-NALINMYSKSGSIDSSYNVFTDM-IYRDIITWNAMICGYSHHGLGKQALQVF 411
Query: 425 NQLIALEPWNSGNYVLLSNIYSA 447
+++ E NYV + SA
Sbjct: 412 QDMVSAE--ECPNYVTFIGVLSA 432
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 169/299 (56%), Gaps = 4/299 (1%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ A+E M +E + T+ V+ CA+ D QLG+R H+ +++ GL DEFV + L
Sbjct: 203 EEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSML 262
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+++Y CG + +A VFD + ++NVV WTA+++ Y+ G EE++N+F + G P+
Sbjct: 263 IDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNE 322
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++ +L AC + L +H V + G +V V +L+++Y+K G+++ + VF
Sbjct: 323 YTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTD 382
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M +DI++W++MI GY+ +G K+AL +F +M P Y T +GVLSA + LG ++ G
Sbjct: 383 MIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEG 442
Query: 252 VWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSG 307
+ + + RN F P L T ++ + ++ G + +A + + K D V W +++
Sbjct: 443 FYYLNHLMRN-FKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNA 500
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 123/259 (47%), Gaps = 10/259 (3%)
Query: 158 NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
N+ ++ SLV LY KCG + AR +FD MP +++VSW+ ++ GY G E L
Sbjct: 42 NQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVL 101
Query: 218 DMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
+F NM +N P Y LSAC+ G ++ G+ + + + + + + L+ M
Sbjct: 102 VLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHM 161
Query: 277 YAKCGRMAQACKVFREMKDK---DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
Y++C + A +V + + D +N+V++ L +G + A V ++ + +
Sbjct: 162 YSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDH 221
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY--GCMVDLLGRSGQLDEAHEL 391
T+VG++ C + G + +R+ M + + ++D+ G+ G++ A +
Sbjct: 222 VTYVGVMGLCAQIRDLQLGLRVH---ARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNV 278
Query: 392 IKSMPMEPNAIVWGALLAG 410
+ N +VW AL+
Sbjct: 279 FDGLQ-NRNVVVWTALMTA 296
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/496 (43%), Positives = 308/496 (62%), Gaps = 5/496 (1%)
Query: 6 VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
SN+ F H Y M G P +T P++LKAC++ H F ++ H+ +K GL +
Sbjct: 114 TSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNL 173
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
FVK +L+ Y G++ KVFD P +++SWT +I Y G EAI F R+
Sbjct: 174 FVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRM--- 230
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA--GKGRNVFVATSLVDLYAKCGNME 183
D ++V VL+AC+QLGD + K I Y++ +VF+ +L+D+Y KCG
Sbjct: 231 NCTADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPH 290
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
AR++F MP K++VSW+SMI G A G KEAL MF MQ LKP+ T+VGVL++CA
Sbjct: 291 LARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCA 350
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+LG LELG W S++++N ++ + L+DMYAKCG + QA VF+ MK KD + A
Sbjct: 351 NLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTA 410
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
++ G +M+G A +F ++ + G++P+ T VG+L C+HAGL++EGR+ F MSR++
Sbjct: 411 MIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLY 470
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
L P EHYGCMVDLLGR+G + EA MP+ P+A VWG+LL C++H K +L E V
Sbjct: 471 HLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETV 530
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
+ +LI +EP G Y+L+SNIYS++++W DA K R M I+K GCS +EVDG+VHE
Sbjct: 531 IQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHE 590
Query: 484 FLVGDNSHPLSEKIYS 499
F G+ SHP S ++ S
Sbjct: 591 FRKGEKSHPKSREMIS 606
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 8/209 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G F+ A+ + M+ G P + T VL +CA D +LG HS I K
Sbjct: 310 MISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNH 369
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D +V +L+++Y CG + A VF + K+V S+TA+I G+ G + A+ +F
Sbjct: 370 MKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFS 429
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS----LVDLY 176
+ G++PD ++V VL+AC+ G L + + + + ++ T +VDL
Sbjct: 430 EMPRMGVRPDHVTLVGVLSACSHAGLLEEGR---RHFQDMSRLYHLQPQTEHYGCMVDLL 486
Query: 177 AKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ G + +A ++MP D W S++
Sbjct: 487 GRAGLISEAEAFTNKMPIVPDASVWGSLL 515
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/602 (37%), Positives = 355/602 (58%), Gaps = 11/602 (1%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ AI F+ M GF FT V ACA + LG + HS +++GL D V+ SL
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSL 308
Query: 72 LNLYVHC---GYLADALKVFDDIPDKNVVSWTAIISGYINEGNL-EEAINMFRRLLHRG- 126
+++Y C G + D KVFD + D +V+SWTA+I+GY+ NL EAIN+F ++ +G
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
++P+ F+ AC L D K + G + G N VA S++ ++ K ME A+
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 428
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
R F+ + EK++VS+++ + G N ++A + + L +T +LS A++G
Sbjct: 429 RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG 488
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
++ G S + + N + LI MY+KCG + A +VF M++++ + W ++++
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G + +G+ F Q+ + G++PN T+V +L C+H GLV EG + FNSM +
Sbjct: 549 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
P +EHY CMVDLL R+G L +A E I +MP + + +VW L CR+H T+L + +
Sbjct: 609 PKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARK 668
Query: 427 LIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLV 486
++ L+P Y+ LSNIY+ + KW ++ ++R M ++ + K GCSW+EV +H+F V
Sbjct: 669 ILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYV 728
Query: 487 GDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY----FLACHSEKLAL 542
GD +HP + +IY +LD L T++K G+VP TD VL +EEE + L HSEK+A+
Sbjct: 729 GDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAV 788
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
AFGLI+T+ +R+ KNLRVCGDCH A+K IS ++GREI++RD NRFH F +G CSC D
Sbjct: 789 AFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCND 848
Query: 603 FW 604
+W
Sbjct: 849 YW 850
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 207/412 (50%), Gaps = 18/412 (4%)
Query: 14 AIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+ + M +G P + TF +LK+C R DF+LG H+ +++ ++ D + SL+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 73 NLYVHCGYLADALKVFDDIP---DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
+LY G A A VF+ + ++VVSW+A+++ Y N G +AI +F L GL P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAKCGN-MEKARR 187
+ + V+ AC+ + + G++ + G +V V SL+D++ K N E A +
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
VFD+M E ++V+W+ MI GFP+EA+ F +M + + +T+ V SACA L
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKC---GRMAQACKVFREMKDKDQVVWNAV 304
L LG S+ R+ + + + +L+DMYAKC G + KVF M+D + W A+
Sbjct: 285 LSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 305 VSGLSMN-GYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFF-NSMSR 361
++G N A +F ++ G ++PN TF C + G+Q + R
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG-CR 412
+ + + ++ + +S ++++A +S+ E N + + L G CR
Sbjct: 403 GLASNSSVAN--SVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR 451
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 44/301 (14%)
Query: 4 GFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC 63
G N F+ A + + + + FTF +L A + G + HS +VK GL C
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
++ V +L+++Y CG + A +VF+ + ++NV+SWT++I+G+ G + F +++
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIH---GYVNEAGKGRNVFVATSLVDLYAKCG 180
G+KP+ + V +L+AC+ +G L + W H Y + K + A +VDL + G
Sbjct: 568 EEGVKPNEVTYVAILSACSHVG-LVSEGWRHFNSMYEDHKIKPKMEHYAC-MVDLLCRAG 625
Query: 181 NMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ A + MP + D++ W + L
Sbjct: 626 LLTDAFEFINTMPFQADVLVWRTF-----------------------------------L 650
Query: 240 SACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
AC ELG + A +E + + P L ++YA G+ ++ ++ R+MK+++
Sbjct: 651 GACRVHSNTELGKLAARKILELDP--NEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
Query: 299 V 299
V
Sbjct: 709 V 709
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/557 (39%), Positives = 335/557 (60%), Gaps = 1/557 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT + + ACA+ + + H+ + + D F+ SL++LY CG + +A KV
Sbjct: 49 PTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKV 108
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD + +K++VSWT++I+GY EAI + +L KP+ F+ +L A D
Sbjct: 109 FDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADS 168
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
IH + +V+V ++L+D+YA+CG M+ A VFD++ K+ VSW+++I G+
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A G + AL +F MQR + ++T + SA A +GALE G W + M ++
Sbjct: 229 ARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTA 288
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+G T++DMYAK G M A KVF + +KD V WN++++ + G K A F ++ K
Sbjct: 289 FVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS 348
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI N +F+ +L C+H GLV EG+ +F+ M + ++L P IEHY +VDLLGR+G L+
Sbjct: 349 GIYLNQISFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNY 407
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A I MPMEP A VWGALLA CR+HK + + + + L+P +SG VLL NIY++
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYAS 467
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ W+ AA++R MM G++K CSWVE++ VH F+ D++HP +E+IY DE++ K
Sbjct: 468 TGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMK 527
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
++ G+VP D+VL ++E+E++ L HSEK+ALAF LI IRI KN+R+CGDC
Sbjct: 528 IRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDC 587
Query: 568 HEAIKLISKITGREIIV 584
H A K ISK+ REI++
Sbjct: 588 HSAFKYISKVFEREIVI 604
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 167/319 (52%), Gaps = 5/319 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ ND AI M F P FTF +LKA D +G + H+L VK
Sbjct: 123 LIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCD 182
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++LL++Y CG + A VFD + KN VSW A+ISG+ +G+ E A+ +F
Sbjct: 183 WHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFA 242
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G + F+ + +A +G L KW+H ++ ++ + FV +++D+YAK G
Sbjct: 243 EMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSG 302
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M AR+VF+++ KD+V+W+SM+ +A G KEA+ F M++ + + + +L+
Sbjct: 303 SMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILT 362
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACK-VFREMKDKD 297
AC+ G ++ G F E+ P + T++D+ + G + A +F+ +
Sbjct: 363 ACSHGGLVKEG--KHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPT 420
Query: 298 QVVWNAVVSGLSMNGYVKV 316
VW A+++ M+ KV
Sbjct: 421 AAVWGALLAACRMHKNAKV 439
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/631 (35%), Positives = 362/631 (57%), Gaps = 27/631 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I ND F+ A+ + M +G P T VL AC++ ++G H ++ G
Sbjct: 505 VISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNG 564
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L + FV T+L+++Y +C VFD + + V W A+++GY ++A+ +F
Sbjct: 565 DLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLF 624
Query: 120 RRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
++ P++ + VL AC + S + IHGY+ + G G++ +V +L+D+Y++
Sbjct: 625 VEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSR 684
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN----------- 227
G +E ++ +F +M ++DIVSW++MI G G +AL++ + MQR
Sbjct: 685 MGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDY 744
Query: 228 -------LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
KP T++ VL CA+L AL G ++ + + + +G+ L+DMYAKC
Sbjct: 745 EDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKC 804
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG------IQPNGN 334
G + A +VF +M ++ + WN ++ M+G + A +F + G I+PN
Sbjct: 805 GCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEV 864
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
T++ + C+H+G+VDEG F++M + P +HY C+VDLLGRSG++ EA+ELI +
Sbjct: 865 TYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINT 924
Query: 395 MPMEPNAI-VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWND 453
MP N + W +LL CR+H+ + E L LEP + +YVL+SNIYS++ W+
Sbjct: 925 MPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQ 984
Query: 454 AAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF 513
A +R M + G++K GCSW+E VH+FL GD SHP S++++ L+ L+ +++ G+
Sbjct: 985 ALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGY 1044
Query: 514 VPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKL 573
VP VL ++++EEK+ L HSE+LA+AFGL+ T P IR+AKNLRVC DCH A K+
Sbjct: 1045 VPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKI 1104
Query: 574 ISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
ISKI REII+RD RFH F G+CSC D+W
Sbjct: 1105 ISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 219/433 (50%), Gaps = 10/433 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++R + F+ AI Y +M P NF FP VLKA A HD LG + H+ + K G
Sbjct: 301 LLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFG 360
Query: 61 --LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
V SL+N+Y CG L A +VFDDIPD++ VSW ++I+ E ++++
Sbjct: 361 HAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHL 420
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQL-GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
FR +L + P SF++V V AC+ + G + K +H Y G R + +LV +YA
Sbjct: 421 FRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLR-TYTNNALVTMYA 479
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
+ G + A+ +F KD+VSW+++I + N +EAL Y M + ++P+ T+
Sbjct: 480 RLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLAS 539
Query: 238 VLSACASLGALELGVWASSFMERN-EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VL AC+ L L +G + RN + + N +GT L+DMY C + + VF + +
Sbjct: 540 VLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRR 599
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
VWNA+++G + N + A +F ++ + PN TF +L C + +
Sbjct: 600 TVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGI 659
Query: 356 FNSM-SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ R F +++ ++D+ R G+++ + + M + + + W ++ GC +
Sbjct: 660 HGYIVKRGFGKDKYVQN--ALMDMYSRMGRVEISKTIFGRM-NKRDIVSWNTMITGCIVC 716
Query: 415 KKTDLAEHVLNQL 427
+ D A ++L+++
Sbjct: 717 GRYDDALNLLHEM 729
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 159/334 (47%), Gaps = 5/334 (1%)
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
W ++ + + +AI+ + +L PD+F+ VL A + DL K IH +V
Sbjct: 298 WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVF 357
Query: 159 EAGKG--RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+ G +V VA SLV++Y KCG++ AR+VFD +P++D VSW+SMI + +
Sbjct: 358 KFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELS 417
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASL-GALELGVWASSFMERNEFLSNPVLGTTLID 275
L +F M EN+ P +T+V V AC+ + G + LG ++ RN L L+
Sbjct: 418 LHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRT-YTNNALVT 476
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MYA+ GR+ A +F KD V WN V+S LS N + A + G++P+G T
Sbjct: 477 MYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVT 536
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
+L C+ + GR+ R L +VD+ Q + L+
Sbjct: 537 LASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKG-RLVFDG 595
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+ VW ALLAG ++ D A + ++I+
Sbjct: 596 VVRRTVAVWNALLAGYARNEFDDQALRLFVEMIS 629
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/528 (43%), Positives = 327/528 (61%), Gaps = 11/528 (2%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNL-----EEAINMFRRLLHRGLK-PDSFSIVRV 137
A +FD IP+ + ++I G+ + ++RR+LH G P+SF++ V
Sbjct: 77 ARALFDQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNSFTLAFV 136
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE-KD 196
L ACT LG+ + +H G + +V T L++LYA+C + AR VFD M E K+
Sbjct: 137 LKACTALGE---GQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDGMVEDKN 193
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASS 256
+V+WSSMI GY+ G EAL +F +MQ + P+ TMV V+SACA GAL+LG W +
Sbjct: 194 LVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVHA 253
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
F++R + L T LIDMYAKCG + +A VF M ++D W+A++ GL+M+G +
Sbjct: 254 FIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAMHGLAED 313
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A G+F ++ + ++PN TFVG+L C H+GLVD+GR+++ +M + + +E+YGCMV
Sbjct: 314 ALGLFSRMLQLKVRPNNVTFVGVLSACAHSGLVDDGRRYWCTMQEL-GIEASMENYGCMV 372
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSG 436
DLL RSG LDEA + MP+ PN+++W LL + + D+ E +L LEP N
Sbjct: 373 DLLCRSGLLDEAFSFVTGMPISPNSVIWRNLLVASKSSNRIDIVELASRRLFELEPQNPE 432
Query: 437 NYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEK 496
NYVLLSN+Y+ + +W+ +R M D + + GCS +E++G +H+F+V D SHP +K
Sbjct: 433 NYVLLSNLYALNSQWDRVRYMRKKMKDNNVTVVAGCSSIEINGYLHKFVVSDGSHPEIKK 492
Query: 497 IYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIR 556
I L E+A ++ AG P T VL D+ EEEK+ L HSE+LA+A+GL+ T VIR
Sbjct: 493 IRLVLREIADRVLCAGHKPWTAAVLHDVVEEEKEVALCEHSERLAIAYGLLKTKAPHVIR 552
Query: 557 IAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ KNLR C DCHE K+ISK GREIIVRD RFH FI GSCSC DFW
Sbjct: 553 VVKNLRFCPDCHEVTKIISKSYGREIIVRDRVRFHRFIGGSCSCNDFW 600
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 169/299 (56%), Gaps = 7/299 (2%)
Query: 17 FYNSMRNEGF-LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLY 75
Y M + G P +FT FVLKAC + G + H+ GL+ +V+T LLNLY
Sbjct: 116 LYRRMLHAGSPAPNSFTLAFVLKACTALGE---GQQLHAQAFGHGLEPSPYVQTGLLNLY 172
Query: 76 VHCGYLADALKVFDD-IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
C +A A VFD + DKN+V+W+++I GY G + EA+ +FR + G+ PD ++
Sbjct: 173 ARCEEVALARNVFDGMVEDKNLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTM 232
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
V V++AC + G L KW+H +++ G ++ ++T+L+D+YAKCG +E+A+ VFD M E
Sbjct: 233 VSVISACAKAGALDLGKWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSMVE 292
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
+D +WS+MI G A +G ++AL +F M + ++P T VGVLSACA G ++ G
Sbjct: 293 RDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPNNVTFVGVLSACAHSGLVDDGRRY 352
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVW-NAVVSGLSMN 311
M+ ++ ++D+ + G + +A M + V+W N +V+ S N
Sbjct: 353 WCTMQELGIEASMENYGCMVDLLCRSGLLDEAFSFVTGMPISPNSVIWRNLLVASKSSN 411
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 115/246 (46%), Gaps = 2/246 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ A+ + M+ G P T V+ ACA+ LG H+ I + G
Sbjct: 200 MIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKG 259
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D + T+L+++Y CG + A VFD + +++ +W+A+I G G E+A+ +F
Sbjct: 260 ITVDLELSTALIDMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFS 319
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+L ++P++ + V VL+AC G + + + E G ++ +VDL + G
Sbjct: 320 RMLQLKVRPNNVTFVGVLSACAHSGLVDDGRRYWCTMQELGIEASMENYGCMVDLLCRSG 379
Query: 181 NMEKARRVFDQMP-EKDIVSWSS-MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
+++A MP + V W + ++ +SN L + E PE Y ++
Sbjct: 380 LLDEAFSFVTGMPISPNSVIWRNLLVASKSSNRIDIVELASRRLFELEPQNPENYVLLSN 439
Query: 239 LSACAS 244
L A S
Sbjct: 440 LYALNS 445
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 339/555 (61%), Gaps = 3/555 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H +VK+ F+ L+ Y+ G+ A K+FD++P++++VSW ++ISGY G L
Sbjct: 54 HCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYL 113
Query: 113 EEAINMFRRLL--HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+ + R++ G +P+ + + +++AC G + IHG V + G V V
Sbjct: 114 GKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVN 173
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+ ++ Y K G++ + ++F+ + K++VSW++MI + NG ++ L F +R +P
Sbjct: 174 AFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEP 233
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ T + VL +C +G + L + F N + T L+D+Y+K GR+ + VF
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
E+ D + W A+++ + +G+ + A F + GI P+ TF LL C+H+GLV+
Sbjct: 294 HEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
EG+ +F +MS+ + + P ++HY CMVDLLGRSG L +A+ LIK MPMEP++ VWGALL
Sbjct: 354 EGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CR++K T L +L LEP + NYV+LSNIYSAS W DA++IR++M KG+ +
Sbjct: 414 CRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRAS 473
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAA-GFVPTTDHVLFDIEEEEK 529
GCS++E +H+F+VGD SHP SEKI KL E+ K+K+ G+ T+ VL D+ E+ K
Sbjct: 474 GCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVK 533
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+ + HSEK+A+AFGL+ +P + I I KNLR+CGDCHE K IS I R II+RD+ R
Sbjct: 534 EEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKR 593
Query: 590 FHCFIEGSCSCKDFW 604
FH F++GSCSC D+W
Sbjct: 594 FHHFLDGSCSCSDYW 608
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 171/344 (49%), Gaps = 13/344 (3%)
Query: 25 GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA 84
GF P TF ++ AC + G H L++K G+ + V + +N Y G L +
Sbjct: 129 GFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSS 188
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAI---NMFRRLLHRGLKPDSFSIVRVLTAC 141
K+F+D+ KN+VSW +I ++ G E+ + NM RR+ H +PD + + VL +C
Sbjct: 189 CKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGH---EPDQATFLAVLRSC 245
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+G + A+ IHG + G N + T+L+DLY+K G +E + VF ++ D ++W+
Sbjct: 246 EDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWT 305
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+M+ YA++GF ++A+ F M + P++ T +L+AC+ G +E G M +
Sbjct: 306 AMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365
Query: 262 EFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAF 318
+ +P L + ++D+ + G + A + +EM + VW A++ + Y
Sbjct: 366 -YRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRV--YKDTQL 422
Query: 319 GVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
G ++P +G +V L + +GL + + N M +
Sbjct: 423 GTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQ 466
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 136/295 (46%), Gaps = 17/295 (5%)
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
L + S++ + +C + + +H V ++ R+ F+ LV Y + G+ A
Sbjct: 30 LDANVSSLIAAVKSCVSI---ELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAE 86
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM--QRENLKPEYYTMVGVLSACAS 244
++FD+MPE+D+VSW+S+I GY+ G+ + ++ M +P T + ++SAC
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
G+ E G + + L + I+ Y K G + +CK+F ++ K+ V WN +
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTM 206
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD-----EGRQFFNSM 359
+ NG + F + G +P+ TF+ +L C G+V G F
Sbjct: 207 IVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGF 266
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
S +T ++DL + G+L+++ + + P+++ W A+LA H
Sbjct: 267 SGNKCITT------ALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATH 314
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + N + + ++N R G P TF VL++C +L H LI+ G
Sbjct: 206 MIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ + T+LL+LY G L D+ VF +I + ++WTA+++ Y G +AI F
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFE 325
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR---NVFVATSLVDLYA 177
++H G+ PD + +L AC+ G + K H + + + R + + +VDL
Sbjct: 326 LMVHYGISPDHVTFTHLLNACSHSGLVEEGK--HYFETMSKRYRIDPRLDHYSCMVDLLG 383
Query: 178 KCGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPEYY 233
+ G ++ A + +MP E W +++ Y +A + + ++ + + Y
Sbjct: 384 RSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGR-NYV 442
Query: 234 TMVGVLSACASLGALELGVWASSFMERN 261
+ + SA G+W + RN
Sbjct: 443 MLSNIYSAS--------GLWKDASRIRN 462
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/448 (48%), Positives = 299/448 (66%)
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
V E+ + ++ T++V AKCG++ AR +FD MP++D VSW++MI GYA G +EA
Sbjct: 167 VFESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREA 226
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
L++F MQ + +K +M+ V++AC LGAL+ G WA +++E+N+ LGT L+DM
Sbjct: 227 LNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDM 286
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
Y KCG + +A KVF EM +K+ W+ + GL+MNGY + +F ++ GI PN TF
Sbjct: 287 YFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITF 346
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
+ +L GC+ G VDEGR F+SM R + P +EHYGCMVDL GR+G+L+EA I +MP
Sbjct: 347 ISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMP 406
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAK 456
++P+A WGALL CR++K +L E +LI +E N G YV LSNIY+ + W+ +
Sbjct: 407 LKPHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSN 466
Query: 457 IRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
+R M +GI K+ GCS +EV+G VHEF GD SHP + I + E++ +LK AG+V +
Sbjct: 467 VRQSMKAEGISKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVAS 526
Query: 517 TDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISK 576
T+ VLFDIEEEEK+ L HSEK+A+AFGL + IRI KNLR+C DCH+ K+ISK
Sbjct: 527 TNSVLFDIEEEEKEDALCKHSEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISK 586
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I REIIVRD NRFH F +G CSCKDFW
Sbjct: 587 IFEREIIVRDRNRFHHFKDGECSCKDFW 614
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 180/358 (50%), Gaps = 40/358 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MIR + + + +FYN + N+ P N+TF F+++ CA+ + G H ++K
Sbjct: 80 MIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQS-ACEAGPAVHGALIK 138
Query: 59 AGLDCDEFVKTSLLNLYVH-------------------------------CGYLADALKV 87
G + D V++ L+ +Y CG + A +
Sbjct: 139 HGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNL 198
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD +P ++ VSW A+I+GY G EA+N+F+ + G+K + S++ V+TACT LG L
Sbjct: 199 FDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGAL 258
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
KW H Y+ + V + T+LVD+Y KCGN+++A +VF +M EK++ +WS+ I G
Sbjct: 259 DQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGL 318
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A NG+ ++ L++F M+ E + P T + VL C+ +G ++ G M+R+ + P
Sbjct: 319 AMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIE-P 377
Query: 268 VLG--TTLIDMYAKCGRMAQACKVFREMKDKDQV-VWNAVVSGLSMNGYVKVAFGVFG 322
L ++D+Y + GR+ +A M K W A+++ M Y + G F
Sbjct: 378 RLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRM--YKNMELGEFA 433
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 38/264 (14%)
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN--LKPEYYTMVGV 238
N+ + ++ DQ + + + +SMI+ Y+ + P ++ + + + N + P+ YT +
Sbjct: 58 NLLYSNQILDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFL 117
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY--------------------- 277
+ CA A E G + ++ F +P + + LI MY
Sbjct: 118 VRTCAQ-SACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDL 176
Query: 278 ----------AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
AKCG + A +F M +D V WNA+++G + G + A +F ++
Sbjct: 177 VCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMD 236
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-CMVDLLGRSGQLD 386
G++ N + + ++ CTH G +D+G+ + + + M + G +VD+ + G +D
Sbjct: 237 GVKVNEVSMISVVTACTHLGALDQGKWAHAYIEK--NKIQMTVNLGTALVDMYFKCGNVD 294
Query: 387 EAHELIKSMPMEPNAIVWGALLAG 410
A ++ M E N W + G
Sbjct: 295 RALKVFWEMN-EKNVYTWSTAIGG 317
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/535 (41%), Positives = 324/535 (60%), Gaps = 42/535 (7%)
Query: 74 LYVHC---GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE-EAINMFRRLLHRGLKP 129
+Y C G + D+ KVF+ +P+ NV+SWTAII+ Y+ G + EAI +F
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELF---------- 50
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
K I VN V SL+ +YA+ G ME AR+ F
Sbjct: 51 --------------------CKMISASVN--------CVGNSLISMYARSGRMEDARKAF 82
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D + EK++VS+++++ GYA N +EA +F + + +T +LS AS+GA+
Sbjct: 83 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + + + SN + LI MY++CG + A +VF EM+D++ + W ++++G +
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G+ A +F ++ + G +PN T+V +L C+H G++ EG++ FNSM + + P +
Sbjct: 203 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 262
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
EHY CMVDLLGRSG L EA E I SMP+ +A+VW LL CR+H T+L H ++
Sbjct: 263 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 322
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
EP + Y+LLSN+++++ +W D KIR M ++ + K GCSW+EV+ VH F VG+
Sbjct: 323 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 382
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
SHP + +IY +LD+LA+K+K G++P TD VL DIEEE+K+ FL HSEK+A+AFGLI+T
Sbjct: 383 SHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLIST 442
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ IRI KNLRVCGDCH AIK IS TGREI+VRD+NRFH G CSC D+W
Sbjct: 443 SQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 141/259 (54%), Gaps = 5/259 (1%)
Query: 56 IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
++ A ++C V SL+++Y G + DA K FD + +KN+VS+ AI+ GY EEA
Sbjct: 53 MISASVNC---VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 109
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+F + G+ +F+ +L+ +G + + IHG + + G N + +L+ +
Sbjct: 110 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 169
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y++CGN+E A +VF++M +++++SW+SMI G+A +GF AL+MF+ M KP T
Sbjct: 170 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 229
Query: 236 VGVLSACASLGALELGVWA-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
V VLSAC+ +G + G +S + + + ++D+ + G + +A + M
Sbjct: 230 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 289
Query: 295 -DKDQVVWNAVVSGLSMNG 312
D +VW ++ ++G
Sbjct: 290 LMADALVWRTLLGACRVHG 308
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 38/301 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N + A +N + + G + FTF +L A G + H ++K G
Sbjct: 96 IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG 155
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ + +L+++Y CG + A +VF+++ D+NV+SWT++I+G+ G A+ MF
Sbjct: 156 YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFH 215
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++L G KP+ + V VL+AC+ +G +S K + E G + +VDL +
Sbjct: 216 KMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRS 275
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G + +A + MP D + W ++
Sbjct: 276 GLLVEAMEFINSMPLMADALVWRTL----------------------------------- 300
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L AC G ELG A+ + E +P L +++A G+ K+ + MK+++
Sbjct: 301 LGACRVHGNTELGRHAAEMILEQE-PDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNL 359
Query: 299 V 299
+
Sbjct: 360 I 360
>gi|224123200|ref|XP_002330363.1| predicted protein [Populus trichocarpa]
gi|222871567|gb|EEF08698.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/576 (39%), Positives = 347/576 (60%), Gaps = 15/576 (2%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
LK C DF + +H+ + K GL D LLN Y+ + A +FD++ + NV
Sbjct: 16 LKNCK---DFIFAISTHANLFKFGLLNDTITTNHLLNSYLRFRRIQYAHHLFDEMHEPNV 72
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
VSWT+++SGY+N G + A+ ++ ++ + P+ F++ V+ +C+ L DL T K +H +
Sbjct: 73 VSWTSLMSGYVNMGRPQSALWLYTKMSESEVSPNGFTLATVINSCSILADLKTGKMVHAH 132
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
V G N+ V +SLVD+Y KC +++ AR VFD M +++VSW++MI GYA NG EA
Sbjct: 133 VQILGLQGNLVVCSSLVDMYGKCNDVDGARMVFDSMSCRNVVSWTAMIAGYAQNGKGYEA 192
Query: 217 LDMF-----YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
L++F Y M+R P ++ + V++ACASLG L G + R + N V+ +
Sbjct: 193 LEVFREFSSYMMER----PNHFMLASVINACASLGRLVSGKVTHGAVIRGGYELNDVVAS 248
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
L+DMYAKCG + KVFR +++ + + +++ G + G K++ +F ++ + P
Sbjct: 249 ALVDMYAKCGSFLYSEKVFRRIRNPSVIPYTSMIVGAAKYGLGKLSLNLFEEMTDRKVMP 308
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
N TFVG+L C+H+GLVDEG + NSM + P + HY C+VD+L R G+LDEA++L
Sbjct: 309 NDVTFVGILHACSHSGLVDEGLRLLNSMHEKHGVMPDVRHYTCVVDMLSRVGRLDEAYKL 368
Query: 392 IKSMPMEPN--AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
KS+ + PN A++WG LL+ RLH + D+A LI +G YV LSN Y+ +
Sbjct: 369 AKSIRVNPNEGALLWGTLLSSSRLHGRVDMAVEASKWLIEYNQQVAGAYVTLSNTYTLAG 428
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
+W +A +R+ M G+ K GCSW+E+ ++ F GD S +++ S L EL ++
Sbjct: 429 EWENAHSLRTEMELVGVHKEPGCSWIEIKDSIYVFYAGDLSCERGDEVISLLRELERRMM 488
Query: 510 AAGFV-PTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
G V +T V D+E+E K+ + HSE+LALAFGLI+ IR+ KNLR+C DCH
Sbjct: 489 ERGCVGGSTGLVFVDVEQEVKEKIVGLHSERLALAFGLISIPKGVTIRVMKNLRICSDCH 548
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
EA KLISKI R+ +VRD NRFH F +GSC+CKDFW
Sbjct: 549 EAFKLISKIVERDFVVRDVNRFHHFKDGSCTCKDFW 584
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 173/322 (53%), Gaps = 5/322 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+V+ Q A+ Y M P FT V+ +C+ D + G H+ + G
Sbjct: 78 LMSGYVNMGRPQSALWLYTKMSESEVSPNGFTLATVINSCSILADLKTGKMVHAHVQILG 137
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + V +SL+++Y C + A VFD + +NVVSWTA+I+GY G EA+ +FR
Sbjct: 138 LQGNLVVCSSLVDMYGKCNDVDGARMVFDSMSCRNVVSWTAMIAGYAQNGKGYEALEVFR 197
Query: 121 RLLHRGL-KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +P+ F + V+ AC LG L + K HG V G N VA++LVD+YAKC
Sbjct: 198 EFSSYMMERPNHFMLASVINACASLGRLVSGKVTHGAVIRGGYELNDVVASALVDMYAKC 257
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+ + +VF ++ ++ ++SMI G A G K +L++F M + P T VG+L
Sbjct: 258 GSFLYSEKVFRRIRNPSVIPYTSMIVGAAKYGLGKLSLNLFEEMTDRKVMPNDVTFVGIL 317
Query: 240 SACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK---D 295
AC+ G ++ G+ +S E++ + + T ++DM ++ GR+ +A K+ + ++ +
Sbjct: 318 HACSHSGLVDEGLRLLNSMHEKHGVMPDVRHYTCVVDMLSRVGRLDEAYKLAKSIRVNPN 377
Query: 296 KDQVVWNAVVSGLSMNGYVKVA 317
+ ++W ++S ++G V +A
Sbjct: 378 EGALLWGTLLSSSRLHGRVDMA 399
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 5/278 (1%)
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
V ++ D A H + + G + L++ Y + ++ A +FD+M E
Sbjct: 10 VHIIQQLKNCKDFIFAISTHANLFKFGLLNDTITTNHLLNSYLRFRRIQYAHHLFDEMHE 69
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
++VSW+S++ GY + G P+ AL ++ M + P +T+ V+++C+ L L+ G
Sbjct: 70 PNVVSWTSLMSGYVNMGRPQSALWLYTKMSESEVSPNGFTLATVINSCSILADLKTGKMV 129
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
+ ++ N V+ ++L+DMY KC + A VF M ++ V W A+++G + NG
Sbjct: 130 HAHVQILGLQGNLVVCSSLVDMYGKCNDVDGARMVFDSMSCRNVVSWTAMIAGYAQNGKG 189
Query: 315 KVAFGVFGQLEKCGIQ-PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-VFSLTPMIEHY 372
A VF + ++ PN ++ C G + G+ ++ R + L ++
Sbjct: 190 YEALEVFREFSSYMMERPNHFMLASVINACASLGRLVSGKVTHGAVIRGGYELNDVVA-- 247
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+VD+ + G + ++ + + P+ I + +++ G
Sbjct: 248 SALVDMYAKCGSFLYSEKVFRRIR-NPSVIPYTSMIVG 284
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/599 (37%), Positives = 355/599 (59%), Gaps = 5/599 (0%)
Query: 10 CFQH--AIEFYN--SMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
C +H A+E + + ++G+ T+ ++ AC + R + ++ +G + D
Sbjct: 94 CNRHREAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDL 153
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
+V +L ++V CG + DA K+FD++P+K+V SW ++ G ++ GN EA +F +
Sbjct: 154 YVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKE 213
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
S + ++ A LG + K IH + G G + FV+ +L+D+Y+KCG++E A
Sbjct: 214 FNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDA 273
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
VFDQMPEK V W+S+I YA +G+ +EAL +++ M+ +++T+ V+ CA L
Sbjct: 274 HCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARL 333
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
+LE A + + R+ F ++ V T L+D Y+K GRM A VF M+ K+ + WNA++
Sbjct: 334 ASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALI 393
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
+G +G + A +F Q+ + G+ P TF+ +L C+++GL G + F SM R +
Sbjct: 394 AGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKV 453
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
P HY CM++LLGR LDEA+ LI++ P +P A +W ALL CR+HK +L +
Sbjct: 454 KPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAE 513
Query: 426 QLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFL 485
+L +EP NY++L N+Y++S K +AA I + KG++ + CSWVEV + FL
Sbjct: 514 KLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFL 573
Query: 486 VGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFG 545
GD SH +++IY K+D L ++ G+ + +L D++EEE Q L HSEKLA+AFG
Sbjct: 574 CGDKSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEE-QRILKYHSEKLAIAFG 632
Query: 546 LITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LI T ++I + RVCGDCH AIKLI+ +TGREI+VRD +RFH F GSCSC D+W
Sbjct: 633 LINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 192/396 (48%), Gaps = 37/396 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G V F A + M E + TF +++A A Q+G + HS +K G
Sbjct: 190 MVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRG 249
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+++Y CG + DA VFD +P+K V W +II+ Y G EEA++++
Sbjct: 250 VGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYF 309
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G D F+I V+ C +L L AK H + G ++ T+LVD Y+K G
Sbjct: 310 EMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWG 369
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
ME AR VF++M K+++SW+++I GY ++G +EA++MF M +E + P + T + VLS
Sbjct: 370 RMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLS 429
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC+ G + G M+R D K M AC + E+ ++ ++
Sbjct: 430 ACSYSGLSQRGWEIFYSMKR--------------DHKVKPRAMHYACMI--ELLGRESLL 473
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
A + + +P N + LL C ++ G+ +
Sbjct: 474 DEA-----------------YALIRTAPFKPTANMWAALLTACRMHKNLELGKL---AAE 513
Query: 361 RVFSLTP-MIEHYGCMVDLLGRSGQLDEAHELIKSM 395
+++ + P + +Y +++L SG+L EA +++++
Sbjct: 514 KLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTL 549
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 162/366 (44%), Gaps = 37/366 (10%)
Query: 63 CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL 122
C + K + N + L + L++ D ++ A++S + ++ +F +
Sbjct: 85 CSQIEKLVVCNRHREAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYM 144
Query: 123 LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
++ G +PD + + RVL ++ KCG M
Sbjct: 145 INSGFEPDLYVMNRVLF-----------------------------------MHVKCGLM 169
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
AR++FD+MPEKD+ SW +M+ G G EA +F M +E T ++ A
Sbjct: 170 LDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRAS 229
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
A LG +++G S + + + LIDMY+KCG + A VF +M +K V WN
Sbjct: 230 AGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWN 289
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
++++ +++GY + A ++ ++ G + T ++ C ++ +Q ++ R
Sbjct: 290 SIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRH 349
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
T ++ + +VD + G++++A + M N I W AL+AG H + A
Sbjct: 350 GFATDIVANTA-LVDFYSKWGRMEDARHVFNRM-RHKNVISWNALIAGYGNHGQGQEAVE 407
Query: 423 VLNQLI 428
+ Q++
Sbjct: 408 MFEQML 413
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/569 (39%), Positives = 344/569 (60%), Gaps = 1/569 (0%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L + AR G++ H IVK+GL V +L+N Y D+ + F+D P K+
Sbjct: 21 LLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+W++IIS + ++ R+++ L+PD + +C L K +H
Sbjct: 81 ATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHC 140
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ G +VFV +SLVD+YAKCG + AR++FD+MP +++V+WS M+ GYA G +E
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEE 200
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL +F ENL Y+ V+S CA+ LELG ++ F S+ +G++L+
Sbjct: 201 ALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVS 260
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y+KCG + A +VF E+ ++ +WNA++ + + + + +F +++ G++PN T
Sbjct: 261 LYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFIT 320
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
F+ +L C+HAGLVDEG+ +F+ M + P +HY +VD+LGR+G+L+EA E++ +M
Sbjct: 321 FLNVLNACSHAGLVDEGKYYFDLMKES-RIEPTDKHYASLVDMLGRAGKLEEALEIVTNM 379
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
P++P VWGALL C +HK T+LA +++ L P +SG ++ LSN Y+A ++ DAA
Sbjct: 380 PIDPTESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAA 439
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
K R ++ D+G +K G SWVE VH F G+ H S++IY KL EL +++ AG+V
Sbjct: 440 KARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVA 499
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
T +VL +++ +EK + HSE+LA+AFGLIT IR+ KNLRVCGDCH AIK +S
Sbjct: 500 DTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMS 559
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
T R IIVRDNNRFH F +G CSC D+W
Sbjct: 560 ICTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 170/318 (53%), Gaps = 1/318 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F N+ ++EF M P + P K+C +G H L +K G
Sbjct: 87 IISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTG 146
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D FV +SL+++Y CG + A K+FD++P +NVV+W+ ++ GY G EEA+ +F+
Sbjct: 147 YDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFK 206
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L L + +S V++ C L + I G ++ + FV +SLV LY+KCG
Sbjct: 207 EALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCG 266
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A +VFD++P +++ W++M++ A + ++ +++F M+ +KP + T + VL+
Sbjct: 267 DLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLN 326
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQV 299
AC+ G ++ G + M+ + +L+DM + G++ +A ++ M D +
Sbjct: 327 ACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTES 386
Query: 300 VWNAVVSGLSMNGYVKVA 317
VW A+++ +++ ++A
Sbjct: 387 VWGALLTSCTIHKNTELA 404
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/603 (36%), Positives = 359/603 (59%), Gaps = 31/603 (5%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
F +L++C + G + HSLI+ +G D+F+ LLN Y G +L +F ++P
Sbjct: 65 FSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMP 124
Query: 93 DKNVVSWTAIISGYINEGNLE-------------------------------EAINMFRR 121
+NV+S+ +I+GY+ G+LE +A+++F+
Sbjct: 125 RRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKE 184
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ G PD F++ VL C L L + +H + + G + V +SL +Y K G+
Sbjct: 185 MYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGS 244
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ ++ MP + +V+W+++I G A NG P+E L+ + M+ +P+ T V VLSA
Sbjct: 245 LSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSA 304
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C+ L L G + + + S + ++LI MY++ G + + K F + ++ D V+W
Sbjct: 305 CSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLW 364
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
+++++ +G + A +F Q+E ++ N TF+ LL C+H+GL ++G ++F+ M +
Sbjct: 365 SSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVK 424
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+ L P IEHY C+VDLLGR+G+L+EA +I+SMP++P+ I+W LLA C+LHK+ ++AE
Sbjct: 425 KYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAE 484
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
+ ++I L+P ++ +YVLLSNI++++ W + ++IR M D+ ++K G SW+E+ +V
Sbjct: 485 RISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLV 544
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
H+F +GD SHP +I L EL ++LK G+VP VL D++ EEK+Y LA HSEK A
Sbjct: 545 HQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFA 604
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+AF L+ T+ IR+ KNLRVC DCH AIK IS+I REIIVRD +RFH F +G CSC
Sbjct: 605 IAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCG 664
Query: 602 DFW 604
++W
Sbjct: 665 NYW 667
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 161/319 (50%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + + A+ + M GFLP FT VL+ CA G H+ ++K G
Sbjct: 165 MIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCG 224
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V +SL ++Y+ G L+D K+ +P + VV+W +I+G G EE +N +
Sbjct: 225 FELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYN 284
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G +PD + V VL+AC++L L + IH V +AG + V +SL+ +Y++ G
Sbjct: 285 MMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSG 344
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E + + F D+V WSSMI Y +G +EAL++F+ M+ ++ T + +L
Sbjct: 345 CLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLY 404
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G E G M + L + T ++D+ + GR+ +A + R M D
Sbjct: 405 ACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDG 464
Query: 299 VVWNAVVSGLSMNGYVKVA 317
++W +++ ++ ++A
Sbjct: 465 IIWKTLLAACKLHKEAEMA 483
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 178/375 (47%), Gaps = 42/375 (11%)
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
N+G +++A + F + P FS +L +C +LG L K +H + +G ++ F
Sbjct: 43 NDGRIKQAYDTFTSEIWS--DPSLFS--HLLQSCIKLGSLFGGKQVHSLIITSGGSKDKF 98
Query: 168 VATSLVDLYAKCG-------------------------------NMEKARRVFDQMPEKD 196
++ L++ Y+K G ++E A+++FD+M E++
Sbjct: 99 ISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERN 158
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASS 256
I +W++MI G F K+AL +F M P+ +T+ VL CA L +L G +
Sbjct: 159 IATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHA 218
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
+ + F + V+G++L MY K G ++ K+ + M + V WN +++G + NG +
Sbjct: 219 CLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEE 278
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
+ ++ G +P+ TFV +L C+ + +G+Q + + + ++ ++
Sbjct: 279 VLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKA-GASSVLAVVSSLI 337
Query: 377 DLLGRSGQLDEAHELIKSMPMEPN--AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWN 434
+ RSG L+++ IK+ N ++W +++A H + + A + +Q+ L+
Sbjct: 338 SMYSRSGCLEDS---IKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLK-ME 393
Query: 435 SGNYVLLSNIYSASH 449
+ LS +Y+ SH
Sbjct: 394 ANEVTFLSLLYACSH 408
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/686 (35%), Positives = 366/686 (53%), Gaps = 82/686 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS-HSLIVKA 59
MI + + A+ + M+ GFLP FTF VL A + D + + H ++K
Sbjct: 110 MITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKL 169
Query: 60 GLDCDEFVKTSLLNLYVHCG---------YLADALKVFDDIPDKNV-------------- 96
G V +LL+ YV C +A A KVFD+ P +
Sbjct: 170 GTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVR 229
Query: 97 -------------------VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
V+W A+ISGY+ G EEA + FRR+ G++ D ++ +
Sbjct: 230 NDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSL 289
Query: 138 LTAC----TQLGDLSTAKWIHGY----VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
++AC ++G + + +HGY V E + V +L+ Y K M +ARRVF
Sbjct: 290 ISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVF 349
Query: 190 DQMPEKDIVSWSSMIQGY-------------------------------ASNGFPKEALD 218
D+MP +DI+SW++++ GY A NGF +E L
Sbjct: 350 DKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLK 409
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
+F M+ E L+P Y G ++AC+ LG+L+ G S + R S G LI MY+
Sbjct: 410 LFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYS 469
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
+CG + A VF M D V WNA+++ L+ +G+ A +F Q+ K I P+ TF+
Sbjct: 470 RCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLT 529
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
+L C HAGL+ EGR +F++M + +TP +HY ++DLL R+G +A +IKSMP E
Sbjct: 530 ILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFE 589
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIR 458
A +W ALLAGCR+H +L ++L+ L P G Y++LSN+Y+A +W++ A++R
Sbjct: 590 AGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVR 649
Query: 459 SMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTD 518
+M ++G++K GCSWVEV+ +VH FLV D HP + +Y+ L +L ++K G+VP T
Sbjct: 650 LLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTK 709
Query: 519 HVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKIT 578
VL D+E E K++ L+ HSEKLA+ +G++ IR+ KNLR+CGDCH A K ISK+
Sbjct: 710 FVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVV 769
Query: 579 GREIIVRDNNRFHCFIEGSCSCKDFW 604
REI+VRD RFH F G CSC ++W
Sbjct: 770 EREIVVRDRKRFHHFKNGECSCGNYW 795
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 199/495 (40%), Gaps = 121/495 (24%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ I+ +G + F+ L+N+Y + A K+FD IP ++V+ T ++S Y + GN+
Sbjct: 28 HAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNV 87
Query: 113 E---------------------------------EAINMFRRLLHRGLKPDSFSIVRVLT 139
+ A+N+F ++ G PD F+ VL+
Sbjct: 88 KLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLS 147
Query: 140 ACTQLGDLST-AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN---------MEKARRVF 189
A + + D + +H V + G V +L+ Y C + M AR+VF
Sbjct: 148 ALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVF 207
Query: 190 DQMPEKDI---------------------------------VSWSSMIQGYASNGFPKEA 216
D+ P+ I V+W++MI GY G +EA
Sbjct: 208 DETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEA 267
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACAS----LGALELGVWASSFMERN--EFLSNPVLG 270
D F M ++ + YT ++SAC S +G G ++ R E + VL
Sbjct: 268 FDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLS 327
Query: 271 T--TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV------------------------ 304
LI Y K RM +A +VF +M +D + WNAV
Sbjct: 328 VNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERN 387
Query: 305 -------VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+SGL+ NG+ + +F Q++ G++P F G + C+ G +D G+Q +
Sbjct: 388 VLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHS 447
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH--- 414
+ R+ + ++ + R G ++ A + +MP +++ W A++A H
Sbjct: 448 QVIRL-GHDSGLSAGNALITMYSRCGVVESAESVFLTMPY-VDSVSWNAMIAALAQHGHG 505
Query: 415 -KKTDLAEHVLNQLI 428
K +L E ++ + I
Sbjct: 506 VKAIELFEQMMKEDI 520
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 149/375 (39%), Gaps = 92/375 (24%)
Query: 142 TQLGDLST----AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI 197
TQL +ST A+ +H ++ +G N F+ L+++Y K N+ AR++FD++P+ DI
Sbjct: 12 TQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDI 71
Query: 198 V---------------------------------SWSSMIQGYASNGFPKEALDMFYNMQ 224
V S+++MI Y+ AL++F M+
Sbjct: 72 VARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMK 131
Query: 225 RENLKPEYYTMVGVLSACASLG------------ALELG--------------------- 251
R P+ +T VLSA + + ++LG
Sbjct: 132 RYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASS 191
Query: 252 --VWASSFM--ERNEFLSNP------VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
V +S M R F P TT+I Y + + A ++ + V W
Sbjct: 192 PLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAW 251
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC----THAGLVDEGRQFFN 357
NA++SG G + AF F ++ GIQ + T+ L+ C G+ + GRQ
Sbjct: 252 NAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHG 311
Query: 358 SMSRVFSLTPMIEHY-----GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+ R ++ H+ ++ + ++ EA + MP+ + I W A+L+G
Sbjct: 312 YILR--TVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLSGYV 368
Query: 413 LHKKTDLAEHVLNQL 427
++ + A + +++
Sbjct: 369 NAQRIEEANSIFSEM 383
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/636 (37%), Positives = 360/636 (56%), Gaps = 43/636 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + + A++ M+++G + T+ L ACAR + G + H+ +++
Sbjct: 261 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 320
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++L+ LY G +A VF+ + D+N V+WT +ISG++ G E++ +F
Sbjct: 321 PHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFN 380
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + D F++ +++ C DL + +H ++G+ + V V+ SL+ +YAKC
Sbjct: 381 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 440
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL------------ 228
N++ A +F M EKDIVSW+SMI Y+ G +A + F M +N+
Sbjct: 441 NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQ 500
Query: 229 --------------------KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+P++ T V + CA LGA +LG + + +
Sbjct: 501 HGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTS 560
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ +I MY+KCGR+ +A KVF + KD V WNA+++G S +G K A +F + K G
Sbjct: 561 VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG 620
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
+P+ ++V +L GC+H+GLV EG+ +F+ M R +++P +EH+ CMVDLLGR+G L EA
Sbjct: 621 AKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEA 680
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
+LI MPM+P A VWGALL+ C++H +LAE + L+ +SG+Y+L++ IY+ +
Sbjct: 681 KDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADA 740
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
K +D+A+IR +M DKGI+K G SW+EVD VH F D SHP I KLDEL K+
Sbjct: 741 GKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKI 800
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
G+V TD +I HSEKLA+AFGL+T I I KNLR+CGDCH
Sbjct: 801 ARLGYV-RTDSTRSEIH----------HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCH 849
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IKLIS +TGRE ++RD RFH F GSCSC D+W
Sbjct: 850 TVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 220/492 (44%), Gaps = 66/492 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ + + ++E + SM G P FT +K+C L ++ +++ K
Sbjct: 128 LMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKF 187
Query: 60 GLDCDEFVKTSLLNLYVHCG------------------------------YLAD-ALKVF 88
D V +L++++V CG Y D AL++F
Sbjct: 188 DSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELF 247
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
D +P+++VVSW ++S G + EA++M + +G++ DS + LTAC +L L
Sbjct: 248 DSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLR 307
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K +H V + +VA++LV+LYAK G ++A+ VF+ + +++ V+W+ +I G+
Sbjct: 308 WGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFL 367
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
G E++++F M+ E + + + + ++S C S L LG S ++ + V
Sbjct: 368 QYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVV 427
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA----------- 317
+ +LI MYAKC + A +FR M +KD V W ++++ S G V A
Sbjct: 428 VSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKN 487
Query: 318 -------FGVFGQ--------------LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
G + Q L + ++P+ T+V L GC G G Q
Sbjct: 488 VITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQII 547
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+V L ++ + + G++ EA ++ + ++ + + W A++ G H
Sbjct: 548 GRTVKV-GLIIDTSVANAVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQHGM 605
Query: 417 TDLAEHVLNQLI 428
A + + ++
Sbjct: 606 GKQAIEIFDDIL 617
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 191/477 (40%), Gaps = 95/477 (19%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVF-DD 90
F L++C H +V GL F++ +LL+ Y+ CG L+DA ++ D
Sbjct: 26 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 85
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK---------------------- 128
I NV++ +++GY G L +A+ +F R+ R +
Sbjct: 86 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 145
Query: 129 ----------PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
P++F++ + +C LG S A + V + + VA +LVD++ +
Sbjct: 146 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 205
Query: 179 CGNMEKARR-------------------------------VFDQMPEKDIVSWSSMIQGY 207
CG ++ A R +FD MPE+D+VSW+ M+
Sbjct: 206 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 265
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+ +G +EALDM +MQ + ++ + T L+ACA L +L G + + RN +P
Sbjct: 266 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 325
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ + L+++YAK G +A VF + D++ V W ++SG G + +F Q+
Sbjct: 326 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 385
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFN------SMSRVFSLTPMIEHYG-------- 373
+ + L+ GC + GRQ + + V +I Y
Sbjct: 386 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 445
Query: 374 ----------------CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
M+ + G + +A E M E N I W A+L H
Sbjct: 446 EAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS-EKNVITWNAMLGAYIQH 501
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 6/203 (2%)
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
N + +++ YAK GR++ A ++F M +D WN ++SG + V+ F +
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 326 KCGIQ-PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ G PN T + C G Q +M + F E +VD+ R G
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVRCGA 208
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
+D A L + EP ++LAG + KT +H L ++ + ++ ++ +
Sbjct: 209 VDLASRLFVRIK-EPTMFCRNSMLAG---YVKTYGVDHALELFDSMPERDVVSWNMMVSA 264
Query: 445 YSASHKWNDAAKIRSMMGDKGIQ 467
S S + +A + M KG++
Sbjct: 265 LSQSGRVREALDMVVDMQSKGVR 287
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/504 (42%), Positives = 315/504 (62%), Gaps = 2/504 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR N +EF N M G P FT P VLKA A + G + H+ +K G
Sbjct: 81 IIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIKTG 140
Query: 61 L-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ + +V +L+ LY CG + D KVFD+ P +++VSWT +I + G A+ F
Sbjct: 141 MVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAF 200
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR-NVFVATSLVDLYAK 178
+ L+ D ++V VL+AC+ LGDL+ + +H Y+ + +VFV +L+D+Y K
Sbjct: 201 MEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLK 260
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
C ++ A +VFD+MP K++V+W++MI G A G +EALD F MQ + +KP+ T+VGV
Sbjct: 261 CDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGV 320
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L++CA+LG LE+G W ++M RN L++ +G L+DMYAKCG + +A +VF MK +D
Sbjct: 321 LNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDV 380
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ A++ GL+++G AF VF ++ + GI+PN TF+GLL C+H GLV EG+++F
Sbjct: 381 YSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQ 440
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
MS + L P EHYGCM+DLLGR+G + EA E+I M + P+ GALL CR+H D
Sbjct: 441 MSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVD 500
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
+ E V+ +L L+P G Y+L++N+YS+ H+W DA KIR M +K ++K GCS +EVD
Sbjct: 501 IGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVD 560
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLD 502
GVVHEF GD SHP S+ I + ++
Sbjct: 561 GVVHEFRKGDKSHPRSKVIIANIN 584
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/531 (42%), Positives = 320/531 (60%), Gaps = 53/531 (9%)
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
++PD S+V VL AC +G K +HG +G ++FV +LVD+YAKCG +++A
Sbjct: 9 MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL------------------ 228
+VFD++ EKD+VSW++M+ GY+ G ++AL +F M+ EN+
Sbjct: 69 KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128
Query: 229 ----------------------------------KPEYYTMVGVLSACASLGALELGVWA 254
KP +T+ L ACA L AL LG
Sbjct: 129 LGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQI 188
Query: 255 SSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+++ RN F S + + LIDMYAK G + A VF +K K+ V W ++++G M+G
Sbjct: 189 HAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGR 248
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
K A VF ++ + G+QP+G T + +L C+H+G++D+G +FFNSMS+ F + P EHY
Sbjct: 249 GKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYA 308
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
CMVDLLGR+G+L+EA ELI+ M MEP++IVW ALL+GCR+H +L EH QL+ L
Sbjct: 309 CMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSE 368
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPL 493
N G+Y LLSNIY+ + +W D A++RS+M + GI+K GCSWV+ F V D +HP
Sbjct: 369 NDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQ 428
Query: 494 SEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKD 553
S++IY L L ++K G+VP T L D+++EEK L HSEKLALA+G++ +AP
Sbjct: 429 SKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGA 488
Query: 554 VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI KNLRVCGDCH AI IS I EII+RD++RFH F +GSCSC +W
Sbjct: 489 PIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 178/363 (49%), Gaps = 57/363 (15%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + VL ACA + G H + V++G D FV +L+++Y CG + +A KV
Sbjct: 11 PDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKV 70
Query: 88 FDDIPDK-----------------------------------NVVSWTAIISGYINEGNL 112
FD I +K NVVSW+A+I+ + G
Sbjct: 71 FDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLG 130
Query: 113 EEAINMFRRLLH----------------RGL-KPDSFSIVRVLTACTQLGDLSTAKWIHG 155
E +++FR + H GL KP+ F+I L AC +L L + IH
Sbjct: 131 CETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHA 190
Query: 156 YV-NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
Y+ ++VA L+D+YAK G+++ AR VFD + +K+ VSW+S++ GY +G K
Sbjct: 191 YILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGK 250
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TT 272
EAL++F M+R L+P+ T++ VL AC+ G ++ G+ + M + EF P
Sbjct: 251 EALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSK-EFGVIPGQEHYAC 309
Query: 273 LIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
++D+ + GR+ +A ++ M+ + +VW A++SG ++ V++ QL + +
Sbjct: 310 MVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSEN 369
Query: 332 NGN 334
+G+
Sbjct: 370 DGS 372
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 124/295 (42%), Gaps = 67/295 (22%)
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+++P+ ++V VL ACAS+GA G R+ + +G L+DMYAKCG + +A
Sbjct: 8 DMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEA 67
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ---------------- 330
KVF +K+KD V WNA+V+G S G + A G+F ++ + I+
Sbjct: 68 SKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQR 127
Query: 331 ------------------------------------PNGNTFVGLLCGCTHAGLVDEGRQ 354
PN T L C + GRQ
Sbjct: 128 GLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQ 187
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ R + + C++D+ +SG +D A + ++ + N + W +L+ G +H
Sbjct: 188 IHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLK-QKNFVSWTSLMTGYGMH 246
Query: 415 KKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
+ A V +++ + L+P LL +Y+ SH S M D+GI+
Sbjct: 247 GRGKEALEVFDEMRRVGLQP---DGVTLLVVLYACSH---------SGMIDQGIE 289
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 130/286 (45%), Gaps = 39/286 (13%)
Query: 14 AIEFYNSM-RNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCD-EFVKTS 70
A+E ++ M + +G + P FT L ACAR +LG + H+ I++ D +V
Sbjct: 148 ALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANC 207
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+++Y G + A VFD++ KN VSWT++++GY G +EA+ +F + GL+PD
Sbjct: 208 LIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPD 267
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+++ VL AC+ G + +G F + S + F
Sbjct: 268 GVTLLVVLYACSHSGMID-------------QGIEFFNSMS---------------KEFG 299
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+P ++ ++ M+ G EA+++ MQ E P V +LS C +EL
Sbjct: 300 VIPGQE--HYACMVDLLGRAGRLNEAMELIEGMQME---PSSIVWVALLSGCRIHANVEL 354
Query: 251 GVWAS-SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
G A+ +E N N T L ++YA R +V MK+
Sbjct: 355 GEHAAKQLLELNS--ENDGSYTLLSNIYANARRWKDVARVRSLMKN 398
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/606 (37%), Positives = 353/606 (58%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ +V N F+ +++ + MR GF+P N+TF LKA F H I+K
Sbjct: 218 IVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC 277
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V LL LY G ++DA KVF+++P +VV W+ +I+ + G EA+++F
Sbjct: 278 YVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLS-TAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ + P+ F++ +L C +G S + +HG V + G +++V+ +L+D+YAKC
Sbjct: 338 RMREAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
M+ A ++F ++ K+ VSW+++I GY + G +A MF R + T L
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACASL +++LGV + + +LIDMYAKCG + A VF EM+ D
Sbjct: 457 GACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVA 516
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG S +G + A + ++ +PNG TF+G+L GC++AGL+D+G++ F SM
Sbjct: 517 SWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESM 576
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R + P +EHY CMV LLGRSGQLD+A +LI+ +P EP+ ++W A+L+ +
Sbjct: 577 IRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEF 636
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A +++ + P + YVL+SN+Y+ + +W + A IR M + G++K G SW+E G
Sbjct: 637 ARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQG 696
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F VG + HP + I L+ L K AG+VP + VL D+++EEK L HSE+
Sbjct: 697 DVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSER 756
Query: 540 LALAFGLI-TTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
LALA+GL+ + ++ I I KNLR+C DCH A+K+IS I R++++RD NRFH F G C
Sbjct: 757 LALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVC 816
Query: 599 SCKDFW 604
SC D W
Sbjct: 817 SCGDHW 822
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 179/376 (47%), Gaps = 8/376 (2%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+ C +++D H I+K G D F LLN YV G+ DAL +FD++P++N
Sbjct: 55 MLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
VS+ + GY ++ I ++ RL G + + L L W+H
Sbjct: 115 NVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHS 170
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ + G N FV +L++ Y+ CG+++ AR VF+ + KDIV W+ ++ Y NG+ ++
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFED 230
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
+L + M+ P YT L A LGA + + + ++ +P +G L+
Sbjct: 231 SLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQ 290
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y + G M+ A KVF EM D V W+ +++ NG+ A +F ++ + + PN T
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
+L GC G Q + +V F L + + ++D+ + ++D A +L
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN--ALIDVYAKCEKMDTAVKLFAE 408
Query: 395 MPMEPNAIVWGALLAG 410
+ N + W ++ G
Sbjct: 409 LS-SKNEVSWNTVIVG 423
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 162/375 (43%), Gaps = 50/375 (13%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
DS + +L C Q D +AK IH + + G ++F L++ Y K G + A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D+MPE++ VS+ ++ QGYA ++ + ++ + RE + + L SL E
Sbjct: 108 DEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
+ W S + + + SN +G LI+ Y+ CG + A VF + KD VVW +VS
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTF--------------------------------- 336
NGY + + + + G PN TF
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 337 --VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
VGLL T G + + + FN M + + P + M+ ++G +EA +L
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPK-NDVVP----WSFMIARFCQNGFCNEAVDLFIR 338
Query: 395 MP---MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV--LLSNIYSASH 449
M + PN ++L GC + K + L E L+ L+ ++ YV L ++Y+
Sbjct: 339 MREAFVVPNEFTLSSILNGCAIGKCSGLGEQ-LHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 450 KWNDAAKIRSMMGDK 464
K + A K+ + + K
Sbjct: 398 KMDTAVKLFAELSSK 412
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/522 (41%), Positives = 330/522 (63%), Gaps = 1/522 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A +F I D + +I GY+NE + E A+ + ++ RG++PD+F+ +L ACT+
Sbjct: 86 AASIFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTR 145
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L + K IHG+V + G +VFV SL+++Y +CG ME + VF+++ K SWSSM
Sbjct: 146 LKAIREGKQIHGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSM 205
Query: 204 IQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
G E L +F M RE NLK E MV LSACA+ GAL LG+ F+ RN
Sbjct: 206 FSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNI 265
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
N ++ T+L+DMY KCG + A +F++M+ ++ + ++A++SG +++G + A +F
Sbjct: 266 SELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFS 325
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
++ K G++P+ +V LL C+H+GLV EGR+ F M + + P EHYGC+VDLLGR+
Sbjct: 326 EMIKEGLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRA 385
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLS 442
G L+EA E I+S+P+E N +VW + L+ CR+H+ +L + +L+ L N G+Y+L+S
Sbjct: 386 GLLEEALETIQSIPIEQNDVVWRSFLSQCRVHQNIELGQIAAQELLKLCSHNPGDYLLIS 445
Query: 443 NIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLD 502
N+YS +H W+D A+ R+ + KG+++ G S V+V G H F+ D SHP ++IY L
Sbjct: 446 NMYSQAHMWDDVARSRTEIAIKGLKQTPGFSTVKVKGKTHRFVSQDRSHPQCKEIYKMLH 505
Query: 503 ELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
++ +LK G+ P +L +++EEEK+ L HS+K+A+AF L+ T P +I+IA+NLR
Sbjct: 506 QMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFALLYTPPGSIIKIARNLR 565
Query: 563 VCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+C DCH K IS I REI+VRD NRFH F G+CSCKD+W
Sbjct: 566 MCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 607
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 173/310 (55%), Gaps = 5/310 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+V+ F+ A+ FYN M G P NFT+P +LKAC R + G + H + K G
Sbjct: 104 MIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQIHGHVFKLG 163
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+ SL+N+Y CG + + VF+ + K+ SW+++ S + G E + +FR
Sbjct: 164 LEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLFR 223
Query: 121 RLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ LK + +V L+AC G L+ IHG++ N+ V TSLVD+Y KC
Sbjct: 224 EMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLVDMYVKC 283
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ A +F +M +++ +++S+MI G+A +G + AL MF M +E L+P++ V +L
Sbjct: 284 GCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYVSLL 343
Query: 240 SACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DK 296
+AC+ G ++ G V+ E + G L+D+ + G + +A + + + ++
Sbjct: 344 NACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYG-CLVDLLGRAGLLEEALETIQSIPIEQ 402
Query: 297 DQVVWNAVVS 306
+ VVW + +S
Sbjct: 403 NDVVWRSFLS 412
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/636 (37%), Positives = 360/636 (56%), Gaps = 43/636 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + + A++ M+++G + T+ L ACAR + G + H+ +++
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 300
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++L+ LY G +A VF+ + D+N V+WT +ISG++ G E++ +F
Sbjct: 301 PHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFN 360
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + D F++ +++ C DL + +H ++G+ + V V+ SL+ +YAKC
Sbjct: 361 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 420
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL------------ 228
N++ A +F M EKDIVSW+SMI Y+ G +A + F M +N+
Sbjct: 421 NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQ 480
Query: 229 --------------------KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+P++ T V + CA LGA +LG + + +
Sbjct: 481 HGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTS 540
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ +I MY+KCGR+ +A KVF + KD V WNA+++G S +G K A +F + K G
Sbjct: 541 VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG 600
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
+P+ ++V +L GC+H+GLV EG+ +F+ M R +++P +EH+ CMVDLLGR+G L EA
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEA 660
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
+LI MPM+P A VWGALL+ C++H +LAE + L+ +SG+Y+L++ IY+ +
Sbjct: 661 KDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADA 720
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
K +D+A+IR +M DKGI+K G SW+EVD VH F D SHP I KLDEL K+
Sbjct: 721 GKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKI 780
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
G+V TD +I HSEKLA+AFGL+T I I KNLR+CGDCH
Sbjct: 781 ARLGYV-RTDSTRSEIH----------HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCH 829
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IKLIS +TGRE ++RD RFH F GSCSC D+W
Sbjct: 830 TVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 220/492 (44%), Gaps = 66/492 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ + + ++E + SM G P FT +K+C L ++ +++ K
Sbjct: 108 LMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKF 167
Query: 60 GLDCDEFVKTSLLNLYVHCG------------------------------YLAD-ALKVF 88
D V +L++++V CG Y D AL++F
Sbjct: 168 DSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELF 227
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
D +P+++VVSW ++S G + EA++M + +G++ DS + LTAC +L L
Sbjct: 228 DSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLR 287
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K +H V + +VA++LV+LYAK G ++A+ VF+ + +++ V+W+ +I G+
Sbjct: 288 WGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFL 347
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
G E++++F M+ E + + + + ++S C S L LG S ++ + V
Sbjct: 348 QYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVV 407
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA----------- 317
+ +LI MYAKC + A +FR M +KD V W ++++ S G V A
Sbjct: 408 VSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKN 467
Query: 318 -------FGVFGQ--------------LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
G + Q L + ++P+ T+V L GC G G Q
Sbjct: 468 VITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQII 527
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+V L ++ + + G++ EA ++ + ++ + + W A++ G H
Sbjct: 528 GRTVKV-GLIIDTSVANAVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQHGM 585
Query: 417 TDLAEHVLNQLI 428
A + + ++
Sbjct: 586 GKQAIEIFDDIL 597
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 191/477 (40%), Gaps = 95/477 (19%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVF-DD 90
F L++C H +V GL F++ +LL+ Y+ CG L+DA ++ D
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 65
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK---------------------- 128
I NV++ +++GY G L +A+ +F R+ R +
Sbjct: 66 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 125
Query: 129 ----------PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
P++F++ + +C LG S A + V + + VA +LVD++ +
Sbjct: 126 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 185
Query: 179 CGNMEKARR-------------------------------VFDQMPEKDIVSWSSMIQGY 207
CG ++ A R +FD MPE+D+VSW+ M+
Sbjct: 186 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+ +G +EALDM +MQ + ++ + T L+ACA L +L G + + RN +P
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 305
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ + L+++YAK G +A VF + D++ V W ++SG G + +F Q+
Sbjct: 306 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 365
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFN------SMSRVFSLTPMIEHYG-------- 373
+ + L+ GC + GRQ + + V +I Y
Sbjct: 366 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425
Query: 374 ----------------CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
M+ + G + +A E M E N I W A+L H
Sbjct: 426 EAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS-EKNVITWNAMLGAYIQH 481
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 6/203 (2%)
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
N + +++ YAK GR++ A ++F M +D WN ++SG + V+ F +
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 326 KCGIQ-PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ G PN T + C G Q +M + F E +VD+ R G
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVRCGA 188
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
+D A L + EP ++LAG + KT +H L ++ + ++ ++ +
Sbjct: 189 VDLASRLFVRIK-EPTMFCRNSMLAG---YVKTYGVDHALELFDSMPERDVVSWNMMVSA 244
Query: 445 YSASHKWNDAAKIRSMMGDKGIQ 467
S S + +A + M KG++
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVR 267
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/584 (39%), Positives = 354/584 (60%), Gaps = 9/584 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE----FVKTSLLNLYVHCGYLAD 83
P T +L A+ G H+ V+A D V T+LL++Y CG+L
Sbjct: 227 PNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVY 286
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL---KPDSFSIVRVLTA 140
A +VF+ + +N V+W+A++ G++ G + EA ++F+ +L +GL P S + L A
Sbjct: 287 ASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTS--VASALRA 344
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
C L DL K +H + ++G ++ SL+ +YAK G +++A +FDQM KD VS+
Sbjct: 345 CANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSY 404
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
S+++ GY NG EA +F MQ N++P+ TMV ++ AC+ L AL+ G +
Sbjct: 405 SALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIV 464
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
S + LIDMYAKCGR+ + ++F M +D V WN +++G ++G K A +
Sbjct: 465 RGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATAL 524
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F ++ +P+ TF+ L+ C+H+GLV EG+++F+ M+ + +TP +EHY MVDLL
Sbjct: 525 FLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLA 584
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
R G LDEA++ I+ MP++ + VWGALL CR+HK DL + V + + L P +GN+VL
Sbjct: 585 RGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVL 644
Query: 441 LSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSK 500
LSNI+SA+ ++++AA++R + ++G +K GCSW+E++G +H F+ GD SH S +IY +
Sbjct: 645 LSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQE 704
Query: 501 LDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKN 560
LD + + G+ T VL D+EEEEK+ L HSEKLA+AFG++T + I + KN
Sbjct: 705 LDNILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKN 764
Query: 561 LRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LRVCGDCH IK ++ + R IIVRD NRFH F G CSC DFW
Sbjct: 765 LRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 207/394 (52%), Gaps = 12/394 (3%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P N+TFPFVLKAC+ D + H +AGL D FV T+L+++Y C A V
Sbjct: 127 PNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATV 186
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F +P ++VV+W A+++GY G + I L+ P++ ++V +L Q G L
Sbjct: 187 FRRMPARDVVAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGAL 245
Query: 148 STAKWIHGYVNEAGKGRN----VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
S + +H Y A + V V T+L+D+YAKCG++ A RVF+ M ++ V+WS++
Sbjct: 246 SQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSAL 305
Query: 204 IQGYASNGFPKEALDMFYNMQREN---LKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+ G+ G EA +F +M + L P ++ L ACA+L L LG + + +
Sbjct: 306 VGGFVLCGRMLEAFSLFKDMLAQGLCFLSPT--SVASALRACANLSDLCLGKQLHALLAK 363
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ ++ G +L+ MYAK G + QA +F +M KD V ++A+VSG NG AF V
Sbjct: 364 SGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRV 423
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F +++ C +QP+ T V L+ C+H + G+ S+ V + ++D+
Sbjct: 424 FRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVI-VRGIASETSICNALIDMYA 482
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ G++D + ++ MP + + W ++AG +H
Sbjct: 483 KCGRIDLSRQIFDVMPAR-DIVSWNTMIAGYGIH 515
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 182/359 (50%), Gaps = 12/359 (3%)
Query: 78 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
CG L+ A +FD IP + + A+I Y G R +P++++ V
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI 197
L AC+ L DL +A+ +H + AG ++FV+T+LVD+YAKC + A VF +MP +D+
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF 257
V+W++M+ GYA +G + + MQ ++ P T+V +L A GAL G ++
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 258 MER----NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
R ++ ++GT L+DMYAKCG + A +VF M +++V W+A+V G + G
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314
Query: 314 VKVAFGVFGQLEK---CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+ AF +F + C + P + L C + + G+Q +++ L +
Sbjct: 315 MLEAFSLFKDMLAQGLCFLSP--TSVASALRACANLSDLCLGKQLHALLAKS-GLHTDLT 371
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
++ + ++G +D+A L M ++ + + + AL++G + K D A V ++ A
Sbjct: 372 AGNSLLSMYAKAGLIDQATTLFDQMVVK-DTVSYSALVSGYVQNGKADEAFRVFRKMQA 429
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/605 (37%), Positives = 346/605 (57%), Gaps = 38/605 (6%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
I GF N C Q ++E + M+ EGF PT +T +L A A+ D + G + H I+
Sbjct: 127 IAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNF 186
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ F+ +L ++Y CG + A +FD + KN+VSW +ISGY G E+ I + +
Sbjct: 187 LGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQ 246
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ G PD ++ ++ A Y +CG
Sbjct: 247 MRLSGHMPDQVTMSTIIAA-----------------------------------YCQCGR 271
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+++ARRVF + EKDIV W++M+ GYA NG ++AL +F M E+++P+ YT+ V+S+
Sbjct: 272 VDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSS 331
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
CA L +L G +N ++ + LIDMY+KCG + A VF M ++ V W
Sbjct: 332 CAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSW 391
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA++ G + NG+ K A +F + + +P+ TF+G+L C H +++G+++F+S+S
Sbjct: 392 NAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISN 451
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+TP ++HY CMV+LLGR+G++++A LIK+M +P+ ++W LL+ C AE
Sbjct: 452 QHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAE 511
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
L L+P + Y++LSN+Y++ +W D A +R++M K ++K G SW+E+D V
Sbjct: 512 VAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEV 571
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
H F D +HP SE IY KL+ L KL+ GF P T+ VL D+ E+EK + HSEKLA
Sbjct: 572 HRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLA 631
Query: 542 LAFGLITTAPKDV--IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LAFGLI P + IRI KN+R+C DCHE +K S+I GR+II+RD+NRFH F G CS
Sbjct: 632 LAFGLIKK-PNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCS 690
Query: 600 CKDFW 604
C D W
Sbjct: 691 CNDNW 695
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 173/351 (49%), Gaps = 37/351 (10%)
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D F +LL+ Y G + + FD +P ++ VS+ I+G+ +E++ +F+
Sbjct: 85 LKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G +P ++IV +L A QL DL K IHG + NVF+ +L D+YAKCG
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E+AR +FD + +K++VSW+ MI GYA NG P++ + + + M+ P+ TM
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM----- 259
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+T+I Y +CGR+ +A +VF E K+KD V
Sbjct: 260 ------------------------------STIIAAYCQCGRVDEARRVFSEFKEKDIVC 289
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++ G + NG + A +F ++ I+P+ T ++ C + G Q + S
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHG-QAVHGKS 348
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ L + ++D+ + G +D+A + MP N + W A++ GC
Sbjct: 349 ILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR-NVVSWNAMIVGC 398
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 159/320 (49%), Gaps = 17/320 (5%)
Query: 98 SWTAIISGYINEGNLEEAINMFRRLLHRGLKP-DSFSIVRVLTACTQLGDLSTAKWIHGY 156
++T ++ + + +A + + H +P DSF ++L + G L A+ +
Sbjct: 24 AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+ + R+ F +L+ YAK G+++ + FD+MP +D VS+++ I G++ N P+E+
Sbjct: 84 MLK----RDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
L++F MQRE +P YT+V +L+A A L L G + FL N + L DM
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDM 199
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
YAKCG + QA +F + K+ V WN ++SG + NG + G+ Q+ G P+ T
Sbjct: 200 YAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM 259
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
++ G VDE R+ F+ + T M+ Y ++G+ ++A L
Sbjct: 260 STIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGY-------AKNGREEDALLLFNE 312
Query: 395 MPM---EPNAIVWGALLAGC 411
M + EP++ ++++ C
Sbjct: 313 MLLEHIEPDSYTLSSVVSSC 332
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 111/213 (52%), Gaps = 2/213 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ N + A+ +N M E P ++T V+ +CA+ G H + AG
Sbjct: 293 MMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAG 352
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + V ++L+++Y CG++ DA VF+ +P +NVVSW A+I G G+ ++A+ +F
Sbjct: 353 LNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFE 412
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L + KPD+ + + +L+AC + + + N+ G + +V+L +
Sbjct: 413 NMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRT 472
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG 211
G +E+A + M + D + WS+++ ++ G
Sbjct: 473 GRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/595 (40%), Positives = 352/595 (59%), Gaps = 3/595 (0%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQL-GVRSHSLIVKAG-LDCDEFVKTS 70
A+ + +M G P +FTFP KA A G + H+L ++ G L D FV +
Sbjct: 102 QALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLPDDAFVSCA 161
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++Y G LA A ++FD++P++NVV+W A+++ + +G E + + L G P+
Sbjct: 162 ALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPN 221
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S+ AC + +LS + +G+V + G G++V V+ S+VD Y KC + KAR VFD
Sbjct: 222 VVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFD 281
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
M ++ VSW SM+ YA NG +EA ++ +R +P + + VL+ CA L L+L
Sbjct: 282 GMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDL 341
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + R+ SN + + L+DMY KCG + A +VF EM ++ V WNA++ G +
Sbjct: 342 GRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAH 401
Query: 311 NGYVKVAFGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
G A VF ++ PN T V +L C+ GL EG + F +M F + P I
Sbjct: 402 IGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRI 461
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
EHY C+VDLL R+G + A+++I+ MPM P+ VWGALL GC++H KT+L +L
Sbjct: 462 EHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLFE 521
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
L+P +SGN+VLLSN+ +++ +W +A +R M + GI+K G SW+ VVH F D
Sbjct: 522 LDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDT 581
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
+H ++ +I + L +L +++AAG++P T + L+D+EEEEK+ + HSEKLALAFGLI
Sbjct: 582 THDMNREIQALLAKLKGQMQAAGYMPDTQYALYDLEEEEKESEVFQHSEKLALAFGLICI 641
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P IRI KNLR+C DCH A K IS I GREIIVRDNN FH F CSCKD+W
Sbjct: 642 PPGIPIRIMKNLRICVDCHRAFKFISGIAGREIIVRDNNMFHHFKNYECSCKDYW 696
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 182/395 (46%), Gaps = 21/395 (5%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F+ L+NLY A P VVS+TA ISG +A++ F +L
Sbjct: 54 FLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRL 113
Query: 126 GLKPDSFSIVRVLTAC----------TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
GL+P+ F+ A TQL L+ GY+ + + FV+ + +D+
Sbjct: 114 GLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALR---FGYLPD-----DAFVSCAALDM 165
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y K G + ARR+FD+MP +++V+W++++ +G P E ++ ++ ++ P ++
Sbjct: 166 YFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSV 225
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+ACA + L LG F+ + F + + +++D Y KC + +A VF M
Sbjct: 226 CAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGV 285
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
++ V W ++V + NG + AF V+ + G +P +L C +D GR
Sbjct: 286 RNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRAL 345
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
R + I +VD+ G+ G +++A ++ MP + N + W A++ G
Sbjct: 346 HAVAVRS-CIDSNIFVASALVDMYGKCGGIEDAEQVFFEMP-QRNLVTWNAMIGGYAHIG 403
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
A V +++I + + NY+ L N+ +A +
Sbjct: 404 DAHNALSVFDKMI-MGQETAPNYITLVNVLTACSR 437
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 155/359 (43%), Gaps = 71/359 (19%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + N + A Y R G PT+F VL CA LG H++ V++
Sbjct: 294 MVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSC 353
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D + FV ++L+++Y CG + DA +VF ++P +N+V+W A+I GY + G+ A+++F
Sbjct: 354 IDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFD 413
Query: 121 RL-LHRGLKPDSFSIVRVLTACTQLG-------DLSTAKWIHGYVNEAGKGRNVFVATSL 172
++ + + P+ ++V VLTAC++ G T KW G + +
Sbjct: 414 KMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPR------IEHYACV 467
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVS-WSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
VDL + G E+A ++ MP + +S W +++ G
Sbjct: 468 VDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGG------------------------- 502
Query: 232 YYTMVGVLSACASLGALELG-VWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKV 289
C G ELG + A E + S N VL L +M A GR A+A V
Sbjct: 503 ----------CKMHGKTELGRIAAEKLFELDPQDSGNHVL---LSNMLASAGRWAEATDV 549
Query: 290 FREMKD--------KDQVVWNAVV-------SGLSMNGYVKVAFGVF-GQLEKCGIQPN 332
+EMK+ + + W VV + MN ++ GQ++ G P+
Sbjct: 550 RKEMKNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPD 608
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/605 (37%), Positives = 346/605 (57%), Gaps = 38/605 (6%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
I GF N C Q ++E + M+ EGF PT +T +L A A+ D + G + H I+
Sbjct: 127 IAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNF 186
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ F+ +L ++Y CG + A +FD + KN+VSW +ISGY G E+ I + +
Sbjct: 187 LGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQ 246
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ G PD ++ ++ A Y +CG
Sbjct: 247 MRLSGHMPDQVTMSTIIAA-----------------------------------YCQCGR 271
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+++ARRVF + EKDIV W++M+ GYA NG ++AL +F M E+++P+ YT+ V+S+
Sbjct: 272 VDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSS 331
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
CA L +L G +N ++ + LIDMY+KCG + A VF M ++ V W
Sbjct: 332 CAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSW 391
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA++ G + NG+ K A +F + + +P+ TF+G+L C H +++G+++F+S++
Sbjct: 392 NAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITN 451
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+TP ++HY CMV+LLGR+G++++A LIK+M +P+ ++W LL+ C AE
Sbjct: 452 QHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAE 511
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
L L+P + Y++LSN+Y++ +W D A +R++M K ++K G SW+E+D V
Sbjct: 512 VAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEV 571
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
H F D +HP SE IY KL+ L KL+ GF P T+ VL D+ E+EK + HSEKLA
Sbjct: 572 HRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLA 631
Query: 542 LAFGLITTAPKDV--IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LAFGLI P + IRI KN+R+C DCHE +K S+I GR+II+RD+NRFH F G CS
Sbjct: 632 LAFGLI-KKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCS 690
Query: 600 CKDFW 604
C D W
Sbjct: 691 CNDNW 695
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 178/379 (46%), Gaps = 68/379 (17%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE---------- 113
D F+ LL+LY G L DA +FD + +++ SW A++S Y G+++
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMP 116
Query: 114 ---------------------EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
E++ +F+R+ G +P ++IV +L A QL DL K
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQ 176
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IHG + NVF+ +L D+YAKCG +E+AR +FD + +K++VSW+ MI GYA NG
Sbjct: 177 IHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQ 236
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
P++ + + + M+ P+ TM +T
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVTM-----------------------------------ST 261
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
+I Y +CGR+ +A +VF E K+KD V W A++ G + NG + A +F ++ I+P+
Sbjct: 262 IIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPD 321
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
T ++ C + G Q + S + L + ++D+ + G +D+A +
Sbjct: 322 SYTLSSVVSSCAKLASLHHG-QAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF 380
Query: 393 KSMPMEPNAIVWGALLAGC 411
MP N + W A++ GC
Sbjct: 381 NLMPTR-NVVSWNAMIVGC 398
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 160/320 (50%), Gaps = 17/320 (5%)
Query: 98 SWTAIISGYINEGNLEEAINMFRRLLHRGLKP-DSFSIVRVLTACTQLGDLSTAKWIHGY 156
++T ++ + + +A + + H +P DSF ++L + G L A+ +
Sbjct: 24 AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+ + R++F +L+ YAK G+++ + FD+MP +D VS+++ I G++ N P+E+
Sbjct: 84 MLK----RDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
L++F MQRE +P YT+V +L+A A L L G + FL N + L DM
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDM 199
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
YAKCG + QA +F + K+ V WN ++SG + NG + G+ Q+ G P+ T
Sbjct: 200 YAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM 259
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
++ G VDE R+ F+ + T M+ Y ++G+ ++A L
Sbjct: 260 STIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGY-------AKNGREEDALLLFNE 312
Query: 395 MPM---EPNAIVWGALLAGC 411
M + EP++ ++++ C
Sbjct: 313 MLLEHIEPDSYTLSSVVSSC 332
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 111/213 (52%), Gaps = 2/213 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+ N + A+ +N M E P ++T V+ +CA+ G H + AG
Sbjct: 293 MMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAG 352
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + V ++L+++Y CG++ DA VF+ +P +NVVSW A+I G G+ ++A+ +F
Sbjct: 353 LNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFE 412
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L + KPD+ + + +L+AC + + + N+ G + +V+L +
Sbjct: 413 NMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRT 472
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG 211
G +E+A + M + D + WS+++ ++ G
Sbjct: 473 GRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/637 (37%), Positives = 363/637 (56%), Gaps = 45/637 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + + A++ M+++G + T+ L ACAR + G + H+ +++
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR-N 299
Query: 61 LDC-DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L C D +V ++L+ LY CG +A VF+ + D+N V+WT +I+G++ G E++ +F
Sbjct: 300 LPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELF 359
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ + D F++ +++ C DL + +H ++G+ + V V+ SL+ +YAKC
Sbjct: 360 NQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKC 419
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL----------- 228
N++ A +F M EKDIVSW+SMI ++ G +A + F M +N+
Sbjct: 420 DNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYI 479
Query: 229 ---------------------KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+P++ T V + CA LGA +LG + + +
Sbjct: 480 QHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDT 539
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ +I MY+KCGR+ +A KVF + KD V WNA+++G S +G K A +F + K
Sbjct: 540 SVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKR 599
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G +P+ ++V +L GC+H+GLV EG+ +F+ M RV +++P +EH+ CMVDLLGR+G L E
Sbjct: 600 GAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTE 659
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A +LI MPM+P A VWGALL+ C++H +LAE + L+ +SG+Y+L++ IY+
Sbjct: 660 AKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYAD 719
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ K +D+A+IR +M DKGI+K G SW+EV+ VH F D SHP I KLDEL K
Sbjct: 720 AGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEK 779
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
+ G+V T D E HSEKLA+AFGL++ I I KNLR+CGDC
Sbjct: 780 IARLGYVRT------DSPRSEIH-----HSEKLAVAFGLMSLPAWMPIHIMKNLRICGDC 828
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H IKLIS +TGRE ++RD RFH F GSCSC D+W
Sbjct: 829 HTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 225/492 (45%), Gaps = 66/492 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ + + ++E + SM G P FTF + +K+C + L ++ ++ K
Sbjct: 108 LMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKF 167
Query: 60 GLDCDEFVKTSLLNLYVHCG------------------------------YLAD-ALKVF 88
G D V +L++++V CG Y D AL++F
Sbjct: 168 GSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELF 227
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
D +P+++VVSW ++S G + EA++M + +G++ DS + LTAC +L L
Sbjct: 228 DSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLR 287
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K +H V + +VA++LV+LYAKCG ++A+ VF+ + +++ V+W+ +I G+
Sbjct: 288 WGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFL 347
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+G E++++F M+ E + + + + ++S C S L LG S ++ + V
Sbjct: 348 QHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVV 407
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA----------- 317
+ +LI MYAKC + A +FR M +KD V W ++++ S G + A
Sbjct: 408 VSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKN 467
Query: 318 -------FGVFGQ--------------LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
G + Q L + ++P+ T+V L GC G G Q
Sbjct: 468 VITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQII 527
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+V L ++ + + G++ EA ++ + ++ + + W A++ G H
Sbjct: 528 GRTVKV-GLILDTSVANAVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQHGM 585
Query: 417 TDLAEHVLNQLI 428
A + + ++
Sbjct: 586 GKQAIEIFDDIL 597
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 194/443 (43%), Gaps = 66/443 (14%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVF-DD 90
F L++C H +V GL F++ +LL+ Y+ CG L DA ++ D
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRL---------------------------- 122
I NV++ +++GY+ G L +A+ +F R+
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125
Query: 123 --LHRG--LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+HR P++F+ + +C LG+ S A + G V + G + VA +LVD++ +
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185
Query: 179 CGNMEKARR-------------------------------VFDQMPEKDIVSWSSMIQGY 207
CG ++ A R +FD MPE+D+VSW+ M+
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
+ +G +EALDM +MQ + ++ + T L+ACA L +L G + + RN +P
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDP 305
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ + L+++YAKCG +A VF + D++ V W +++G +G + +F Q+
Sbjct: 306 YVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAE 365
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
+ + L+ GC + GRQ + + + ++ ++ + + L
Sbjct: 366 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQS 424
Query: 388 AHELIKSMPMEPNAIVWGALLAG 410
A + + M E + + W +++
Sbjct: 425 AESIFRFMN-EKDIVSWTSMITA 446
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 129/299 (43%), Gaps = 38/299 (12%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
NV +++ Y K G + A +F +MP +D+ SW++++ GY + +L+ F +M
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129
Query: 225 RE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR- 282
R + P +T + +C +LG L + +++ + + L+DM+ +CG
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTV 189
Query: 283 ------------------------------MAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ A ++F M ++D V WN +VS LS +G
Sbjct: 190 DLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
V+ A + ++ G++ + T+ L C + G+Q ++V P I+ Y
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLH---AQVIRNLPCIDPY 306
Query: 373 --GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+V+L + G EA + S+ + N + W L+AG H + + NQ+ A
Sbjct: 307 VASALVELYAKCGCFKEAKGVFNSLH-DRNNVAWTVLIAGFLQHGCFTESVELFNQMRA 364
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/566 (39%), Positives = 335/566 (59%), Gaps = 15/566 (2%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCG-----YLADALKVFDDIPDKNVVSW-TAIISGY 106
H+ VK+GL T LL L G L+ A +VFD IP V W ++ GY
Sbjct: 51 HAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRIPGPGDVVWYNTLLRGY 110
Query: 107 IN-------EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE 159
EEA +F R+L G+ PD+++ V +L AC + HG +
Sbjct: 111 ARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVK 170
Query: 160 AGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDM 219
G + +V +L+++YA+CG+ AR +F ++ + +VS+++MI + P EAL +
Sbjct: 171 VGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVL 230
Query: 220 FYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK 279
F MQ + LK T++ VLSACA LGALELG W ++ + + S + T LIDMY K
Sbjct: 231 FREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGK 290
Query: 280 CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
CG + A VF+ M+ +D+ W+ ++ + + Y + A +F +++K GI+P+ TF+G+
Sbjct: 291 CGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGV 350
Query: 340 LCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP 399
L C+H+GLV EG Q+F+SM R F L P I+HYGC+ DLL RSGQLD A+E I +P++P
Sbjct: 351 LYACSHSGLVSEGLQYFDSM-REFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKP 409
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRS 459
AI+W LL+ C DL + V +++ L+ + G+YV+ SN+ + + +W + ++R
Sbjct: 410 TAILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMNRVRK 469
Query: 460 MMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDH 519
+M +KG+ K+ GCS +EVD VHEF GD HP S +D + +LK AG+VP T H
Sbjct: 470 LMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSLDARRMVDGVIEQLKLAGYVPNTSH 529
Query: 520 VL-FDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKIT 578
V ++ EEEK L HSEKLA++FGL+ T+P +R+ KNLRVC DCH KL+S +
Sbjct: 530 VFHVEMGEEEKAVSLRYHSEKLAISFGLLNTSPGTTLRVVKNLRVCPDCHSMAKLVSMVF 589
Query: 579 GREIIVRDNNRFHCFIEGSCSCKDFW 604
R II+RD NRFH F +G CSC D+W
Sbjct: 590 NRRIILRDLNRFHHFEDGVCSCGDYW 615
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 168/316 (53%), Gaps = 5/316 (1%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ A + M EG P +TF +LKACA + G ++H + VK G E+V +L
Sbjct: 124 EEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTL 183
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+N+Y CG A +F + + VVS+ A+I+ + EA+ +FR + +GLK S
Sbjct: 184 INMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTS 243
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+++ VL+AC LG L +WIH YV + V V T+L+D+Y KCG++E A VF
Sbjct: 244 VTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQG 303
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M +D +WS MI YA++ + +EA+ +F M+++ +KP+ T +GVL AC+ G + G
Sbjct: 304 MESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEG 363
Query: 252 VWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDKDQ-VVWNAVVSGL 308
+ F EF P + + D+ A+ G++ +A + E+ K ++W ++S
Sbjct: 364 L--QYFDSMREFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSAC 421
Query: 309 SMNGYVKVAFGVFGQL 324
G + VF ++
Sbjct: 422 GSRGDADLGKQVFERI 437
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI V + A+ + M+ +G T+ T VL ACA +LG H + K
Sbjct: 214 MITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQ 273
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD V T+L+++Y CG L DA+ VF + ++ +W+ +I Y N EAI++F
Sbjct: 274 LDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFE 333
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ +G+KPD + + VL AC+ G +S + E G + + DL A+ G
Sbjct: 334 EMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMREFGLVPGIKHYGCVADLLARSG 393
Query: 181 NMEKARRVFDQMPEKDI-VSWSSMIQGYASNG 211
+++A D++P K + W +++ S G
Sbjct: 394 QLDRAYEFIDELPIKPTAILWRTLLSACGSRG 425
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/559 (40%), Positives = 340/559 (60%), Gaps = 4/559 (0%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G++ H+ I+K GL + L+N Y +L++F D P K+ +W+++IS +
Sbjct: 39 GLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQ 98
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
++N FR +L +G+ PD +C L L AK +H + + ++FV
Sbjct: 99 NDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFV 158
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF--YNMQRE 226
+S++D+YAKCG++ A VFD+MP +++VSWS +I GY G E+L +F + ++ E
Sbjct: 159 GSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEE 218
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
N +T+ VL C L++G + F S+ + ++LI +Y+KCG + +A
Sbjct: 219 NEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEA 278
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTH 345
VF E+ ++ +WNA++ + + + F +F +++ G ++ N TF+ +L C+H
Sbjct: 279 YDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSH 338
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
AGLV++G+ +F M + + + P +HY MVDLLGR+G+L++A +LI+ MPMEP VWG
Sbjct: 339 AGLVEKGKYYFELM-KDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWG 397
Query: 406 ALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKG 465
ALL GCRLH T LA +V +++ L +SG +V+LSN Y+A+ +W +AAK R MM D+G
Sbjct: 398 ALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRG 457
Query: 466 IQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIE 525
I+K G SWVE +H F GD SH S +IY KLDEL ++ AG+V T VL +++
Sbjct: 458 IKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLKEVD 517
Query: 526 EEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVR 585
EEK + HSE+LA+AFG IT IR+ KNLRVCGDCH AIK ISK TGR IIVR
Sbjct: 518 GEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVR 577
Query: 586 DNNRFHCFIEGSCSCKDFW 604
DNNRFH F +G C+C D+W
Sbjct: 578 DNNRFHRFEDGKCTCGDYW 596
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 171/337 (50%), Gaps = 4/337 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F ND ++ ++ M +G P + FP K+C + H +K
Sbjct: 92 VISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTA 151
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV +S++++Y CG + A VFD++P +NVVSW+ +I GY+ G +E++ +F+
Sbjct: 152 YHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFK 211
Query: 121 RLL--HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
R L + F++ VL C L + IHG + + FVA+SL+ LY+K
Sbjct: 212 RFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSK 271
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVG 237
CG +E+A VF+++ +++ W++M+ A + + ++F M+ +K + T +
Sbjct: 272 CGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLC 331
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DK 296
VL AC+ G +E G + M+ +T++D+ + G++ A K+ EM +
Sbjct: 332 VLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEP 391
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+ VW A+++G ++G K+A V ++ + G +G
Sbjct: 392 TESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSG 428
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 146/324 (45%), Gaps = 4/324 (1%)
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
+P ++ L + T L +H ++ + G ++ L++ Y+K + +
Sbjct: 17 QPLYRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQ 76
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
+F P K +WSS+I +A N P +L+ F M R+ + P+ + +C L +
Sbjct: 77 IFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSS 136
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
L + F + + + +G+++IDMYAKCG + A VF EM ++ V W+ ++ G
Sbjct: 137 LPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYG 196
Query: 308 LSMNGYVKVAFGVFGQ--LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
G + +F + +E+ N T +L C + L+ GR + +S S
Sbjct: 197 YVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGR-LIHGLSFKTSF 255
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
++ L + G ++EA+++ + + + N +W A+L C H TD + +
Sbjct: 256 DSSCFVASSLISLYSKCGVVEEAYDVFEEVTVR-NLGMWNAMLIACAQHAHTDKTFELFD 314
Query: 426 QLIALEPWNSGNYVLLSNIYSASH 449
++ ++ + L +Y+ SH
Sbjct: 315 KMKSVGGMKANFITFLCVLYACSH 338
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 84/200 (42%), Gaps = 9/200 (4%)
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
P+ L + ++ N +P Y + L + +L G+ + + + + P+L
Sbjct: 4 PQHQLQLPHSF---NQQPLYRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHH 60
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
LI+ Y+K + ++F + K W++V+S + N ++ F + + G+ P+
Sbjct: 61 LINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPD 120
Query: 333 GNTFVGLL--CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
+ F CG + V + F ++ + L + ++D+ + G + AH
Sbjct: 121 DHIFPSATKSCGILSSLPVAKMLHCF-ALKTAYHLDIFVG--SSVIDMYAKCGDICYAHN 177
Query: 391 LIKSMPMEPNAIVWGALLAG 410
+ MP N + W L+ G
Sbjct: 178 VFDEMPYR-NVVSWSGLIYG 196
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/560 (39%), Positives = 342/560 (61%), Gaps = 9/560 (1%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHC-----GYLADALKVFDDIPDKNVVSWTAIISG 105
+SH+ I+K GL D F + NL C G + A +F + + + ++ G
Sbjct: 6 QSHARILKXGLFXDSFCAS---NLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRG 62
Query: 106 YINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
++ + N EEA+ ++ + RG+KPD+F+ +L AC +L + +H ++ + G +
Sbjct: 63 HVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLEND 122
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
VFV SL+ +Y KCG + VF+QM E+ + SWS++I +AS G + L + +M
Sbjct: 123 VFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSN 182
Query: 226 ENL-KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
E + E +V VLSAC LGAL+LG F+ RN N ++ T+LI+MY KCG +
Sbjct: 183 EGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLY 242
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
+ +F++M K+++ ++ ++SGL+M+GY + +F ++ + G++P+ +VG+L C+
Sbjct: 243 KGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACS 302
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
HAGLV EG Q FN M + P I+HYGCMVDL+GR+G++DEA ELIKSMPMEPN ++W
Sbjct: 303 HAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLW 362
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
+LL+ ++H E QL L+ + +YV+LSN+Y+ + +W D A+ R+ M K
Sbjct: 363 RSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSK 422
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
G+ + G S VEV +H F+ D HP SE +Y L ++ +LK G+ P T VL D+
Sbjct: 423 GLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLCDV 482
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
+EEEK+ L+ HS+KLA+A+ LI T+ +RI +NLR+C DCH KLIS I REI V
Sbjct: 483 DEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDREITV 542
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD +RFH F +G+CSC+D+W
Sbjct: 543 RDRHRFHHFKDGACSCRDYW 562
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 189/340 (55%), Gaps = 3/340 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+RG V + + A+ Y M G P NFT+P +LKACAR + G++ H+ I+K G
Sbjct: 59 MMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLG 118
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+ SL+++Y CG + VF+ + +++V SW+A+I+ + + G + + +
Sbjct: 119 LENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLG 178
Query: 121 RLLHRGL-KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ + G + + +V VL+ACT LG L + +HG++ G NV V TSL+++Y KC
Sbjct: 179 DMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKC 238
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + K +F +M +K+ +S+S MI G A +G+ +E L +F M + L+P+ VGVL
Sbjct: 239 GXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVL 298
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGT-TLIDMYAKCGRMAQACKVFREMK-DKD 297
+AC+ G ++ G+ + M+ + + ++D+ + G++ +A ++ + M + +
Sbjct: 299 NACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPN 358
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
V+W +++S ++ ++ QL K Q + V
Sbjct: 359 DVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVV 398
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 141/325 (43%), Gaps = 40/325 (12%)
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+EE R+L GL DSF ++ C + + W
Sbjct: 1 MEEFKQSHARILKXGLFXDSFCASNLVATC------ALSDW------------------- 35
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
G+M+ A +F QM E +++M++G+ + +EAL + M +KP+
Sbjct: 36 --------GSMDYACSIFRQMDEPGSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPD 87
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
+T +L ACA L A+E G+ + + + ++ + +LI MY KCG + C VF
Sbjct: 88 NFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFE 147
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI-QPNGNTFVGLLCGCTHAGLVD 350
+M ++ W+A+++ + G + G + G + + V +L CTH G +D
Sbjct: 148 QMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALD 207
Query: 351 EGRQFFNSMSR-VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
GR + R V L ++E ++++ + G L + L + M + N + + +++
Sbjct: 208 LGRSVHGFLLRNVSGLNVIVE--TSLIEMYLKCGXLYKGMCLFQKMA-KKNKLSYSVMIS 264
Query: 410 GCRLHKKTDLAEHVLNQLI--ALEP 432
G +H + +++ LEP
Sbjct: 265 GLAMHGYGREGLRIFTEMLEQGLEP 289
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/542 (40%), Positives = 335/542 (61%), Gaps = 9/542 (1%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D T+++ G L++A ++FD++P +NVV+WT++ISGY + +++ R+L
Sbjct: 170 DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYA----MNNKVDVARKLF 225
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
+ + +L T+ G ++ A + +A + V ++ + G +
Sbjct: 226 EVMPDKNEVTWTAMLKGYTRSGRINEAAELF----KAMPVKPVAACNGMIMGFGLNGEVG 281
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
KAR VFDQM EKD +WS++I+ Y GF EAL +F MQRE ++P + +++ +LS C
Sbjct: 282 KARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCG 341
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
SL +L+ G S + R+ F + + + LI MY KCG + +VF KD V+WN+
Sbjct: 342 SLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNS 401
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++G + +G+ + A VF ++ G P+ TF+G+L C + G V EG + F SM +
Sbjct: 402 IIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKY 461
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ EHY CMVDLLGR+G+L+EA LI++MP+E +AIVWGALL+ CR HK DLAE
Sbjct: 462 QVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIA 521
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
+L+ LEP ++G Y+LLSN+Y++ +W D A++R M + + K GCSW+EVD VH
Sbjct: 522 AKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHM 581
Query: 484 FLVGDN-SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
F G + SHP E I KL++L L+ AG+ P V+ D++EE+K + L HSEK+A+
Sbjct: 582 FTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAV 641
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
A+GL+ IR+ KNLRVCGDCH AIKLI+++TGREII+RD NRFH F +G CSC+D
Sbjct: 642 AYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRD 701
Query: 603 FW 604
FW
Sbjct: 702 FW 703
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 179/375 (47%), Gaps = 50/375 (13%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++ YV G +++A KVFD +P++NVVSWT+++ GY+ EG ++EA +F R+ +
Sbjct: 84 LVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKN---- 139
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK------GRNVFVATSLVDLYAKCGNMEK 184
V++ LG L G V+EA + ++V +T+++ G + +
Sbjct: 140 ------VVSWTVMLGGLIE----DGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSE 189
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-----LKPEYYTMVGVL 239
AR +FD+MP++++V+W+SMI GYA N A +F M +N + YT G +
Sbjct: 190 AREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRI 249
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTT----LIDMYAKCGRMAQACKVFREMKD 295
+ A L F + PV +I + G + +A VF +MK+
Sbjct: 250 NEAAEL-----------------FKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKE 292
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
KD W+A++ G+ A +F +++ G++PN + + +L C +D GRQ
Sbjct: 293 KDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQV 352
Query: 356 FNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + R F L + ++ + + G L + + + ++W +++AG H
Sbjct: 353 HSQLVRSHFDLDIYVS--SVLITMYIKCGDLVTGKRVFDRFSSK-DIVMWNSIIAGYAQH 409
Query: 415 KKTDLAEHVLNQLIA 429
+ A V +++ +
Sbjct: 410 GFGEKALEVFHEMFS 424
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
++ + G + A +FDD+ K V SW AI++GY + EA +F ++ R
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPER------ 76
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+T W LV Y K G + +AR+VFD+
Sbjct: 77 ----------------NTISW-----------------NGLVSGYVKNGMISEARKVFDK 103
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
MPE+++VSW+SM++GY G EA +F+ M +N+ + M+G G +E G
Sbjct: 104 MPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNV-VSWTVMLG--------GLIEDG 154
Query: 252 VWASSFMERNEF----LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
+ R F + + V T +I GR+++A ++F EM ++ V W +++SG
Sbjct: 155 RVDEA---RRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISG 211
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGN--TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
+MN V VA +F + P+ N T+ +L G T +G ++E + F +M +
Sbjct: 212 YAMNNKVDVARKLF------EVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAM----PV 261
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
P+ G M+ G +G++ +A + M E + W AL+
Sbjct: 262 KPVAACNG-MIMGFGLNGEVGKARWVFDQMK-EKDDGTWSALI 302
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+ ++ M+ EG P + +L C G + HS +V++ D D +V + L+
Sbjct: 313 EALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLI 372
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
+Y+ CG L +VFD K++V W +II+GY G E+A+ +F + G PD
Sbjct: 373 TMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEI 432
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS--------------LVDLYAK 178
+ + VL+AC GY + +G +F + +VDL +
Sbjct: 433 TFIGVLSAC-------------GYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGR 479
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQG 206
G + +A + + MP E D + W +++
Sbjct: 480 AGKLNEAMNLIENMPVEADAIVWGALLSA 508
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 130/301 (43%), Gaps = 56/301 (18%)
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ +A+ G +++AR +FD + K + SW++++ GY N P EA +F M PE
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKM------PE- 75
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
N + L+ Y K G +++A KVF +
Sbjct: 76 --------------------------------RNTISWNGLVSGYVKNGMISEARKVFDK 103
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M +++ V W ++V G G + A +F ++ + N ++ +L G G VDE
Sbjct: 104 MPERNVVSWTSMVRGYVQEGLIDEAELLFWRMP----EKNVVSWTVMLGGLIEDGRVDEA 159
Query: 353 RQFFNSMSRVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
R R+F + P+ + M+ L G+L EA E+ MP + N + W ++++G
Sbjct: 160 R-------RLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMP-QRNVVAWTSMISG 211
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
++ K D+A + + N + + Y+ S + N+AA++ M K +
Sbjct: 212 YAMNNKVDVARKLFE---VMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACN 268
Query: 471 G 471
G
Sbjct: 269 G 269
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
R+ F S+ + I +A+ G++ +A +F +++ K WNA+V+G N A
Sbjct: 9 RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68
Query: 320 VFGQLEKCGIQPNGNTFV--GLLCGCTHAGLVDEGRQFFNSMSR--VFSLTPMIEHYGCM 375
+F ++ P NT GL+ G G++ E R+ F+ M V S T M+ Y
Sbjct: 69 LFDKM------PERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGY--- 119
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ G +DEA L MP E N + W +L G + D A + + +
Sbjct: 120 ----VQEGLIDEAELLFWRMP-EKNVVSWTVMLGGLIEDGRVDEARRLFDMI 166
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS-HSLIVKA 59
+I G+ + + A+E ++ M + G P TF VL AC + G+ S+ K
Sbjct: 402 IIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKY 461
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINM 118
+D +++L G L +A+ + +++P + + + W A++S NL+ A
Sbjct: 462 QVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIA 521
Query: 119 FRRLLHRGLKPDS 131
++LL L+P S
Sbjct: 522 AKKLLQ--LEPSS 532
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/610 (37%), Positives = 351/610 (57%), Gaps = 6/610 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ + N + A ++ M ++G P T L AC + LG + + LI
Sbjct: 104 LMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEA 163
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D V++SL+ +Y C + +A + FD P+K+VV WTA+IS Y + A+ + R
Sbjct: 164 LEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVR 223
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN-VFVATSLVDLYAKC 179
R+ G+K + V +L AC DL H G R+ VA +LV+LY KC
Sbjct: 224 RMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKC 283
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ ARRV D MP + VSW++MI YA NG EA+++F M E +P T++ V+
Sbjct: 284 GRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVV 343
Query: 240 SACASLGALELGVWASSFMERN-EFLSNPVLGTTLIDMYAKCGRMAQACKVFR--EMKDK 296
+CA LG L LG + + + F + +L +I MY KCG + A +VF ++ +
Sbjct: 344 DSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTR 403
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQ-LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
V W A++ + NG + A +F + L G +PN TF+ +LC C+H G +++ +
Sbjct: 404 SVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEH 463
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI-KSMPMEPNAIVWGALLAGCRLH 414
F SM F + P +HY C+VDLLGR+G+L EA +L+ + E + + W A L+ C+++
Sbjct: 464 FCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMN 523
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
+ ++ ++ LEP N VLLSN+Y+A + D A+IR+ M G++K G SW
Sbjct: 524 GDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSW 583
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+E++ VHEF+V D SHP +IYS+L+ L ++K AG+VP T VL D++EE+K L
Sbjct: 584 IEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLG 643
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSE+LA+A G+I+T P +R+ KNLRVC DCH A K IS+I GR+IIVRD +RFH F
Sbjct: 644 YHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFK 703
Query: 595 EGSCSCKDFW 604
+G CSC D+W
Sbjct: 704 DGVCSCGDYW 713
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 180/361 (49%), Gaps = 8/361 (2%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ I LD + F+ L++ Y G L A F I N SW +++ Y G+
Sbjct: 55 HAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHP 114
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
A +F + +G++P++ ++ L ACT +L+ + ++ + + V +SL
Sbjct: 115 RGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSL 174
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ +Y +C +E+A R FD+ PEKD+V W++MI YA N AL++ M E +K
Sbjct: 175 ITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGL 234
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFL----SNPVLGTTLIDMYAKCGRMAQACK 288
T V +L ACAS L GV +F +R + S+ V+ TL+++Y KCGR+ A +
Sbjct: 235 PTYVSLLDACASTMDLRNGV---AFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARR 291
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
V M + V W A+++ + NG A +F ++ G +P+ T + ++ C G
Sbjct: 292 VLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGT 351
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV-WGAL 407
+ G++ + S + + ++ + G+ G L+ A E+ + +P+ ++V W A+
Sbjct: 352 LSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAM 411
Query: 408 L 408
+
Sbjct: 412 I 412
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 144/307 (46%), Gaps = 4/307 (1%)
Query: 143 QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSS 202
Q L + +H + RN F+ LVD Y+K G++ A+ F ++ + SW+
Sbjct: 44 QCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNI 103
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
++ YA NG P+ A +F+ M + ++P T+ L AC + L LG + +
Sbjct: 104 LMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEA 163
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
+ + ++LI MY +C + +A + F +KD V W A++S + N A +
Sbjct: 164 LEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVR 223
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
+++ GI+ T+V LL C + G F + + G +V+L G+
Sbjct: 224 RMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKC 283
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV-LNQLIALEPWNSGNYVLL 441
G++D+A ++ +MP+ ++ W A++A + + AE + L Q + LE + L+
Sbjct: 284 GRVDDARRVLDAMPVR-TSVSWTAMIAA--YAQNGNAAEAINLFQCMDLEGAEPSDITLI 340
Query: 442 SNIYSAS 448
S + S +
Sbjct: 341 SVVDSCA 347
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/527 (41%), Positives = 326/527 (61%), Gaps = 1/527 (0%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G + A +F I + +I GY+N N+E A+ ++ +L RG++ D+F+ +
Sbjct: 33 GSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALF 92
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
AC L + IHGY+ + G ++FV SL+++Y KCG +E + VF+ M +D+
Sbjct: 93 KACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVA 152
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSF 257
SWS++I +AS G E L +F M RE + +PE +V VLSAC LGAL+LG
Sbjct: 153 SWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVT 212
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ RN N ++ T+LIDMY KCG + + +F+ M K+Q+ ++ +++GL+M+G A
Sbjct: 213 LLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEA 272
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
VF + + G++P+ ++G+L C HAGLVDEG Q FN M + P I+HYGC+V
Sbjct: 273 LQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVH 332
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGN 437
L+GR+G L++A E I+SMP++PN +VW LL+ C+ H ++ E L L N G+
Sbjct: 333 LMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGD 392
Query: 438 YVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKI 497
YV+LSN+Y+ + +W D AKIR+ M KG + G S V+V+ +++F+ D SHP + +
Sbjct: 393 YVVLSNMYARAKRWEDVAKIRTEMARKGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGM 452
Query: 498 YSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRI 557
Y + ++ +LK G+ P T VLFD++EEEK+ L HS+KLA+AF LI T+ IRI
Sbjct: 453 YEMIHQMEWQLKFEGYSPDTSQVLFDVDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIRI 512
Query: 558 AKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A+NLR+C DCH KLIS I REI VRD NRFH F +G+CSC+D+W
Sbjct: 513 ARNLRMCNDCHTYTKLISVIYQREITVRDRNRFHHFKDGTCSCRDYW 559
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 172/310 (55%), Gaps = 3/310 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+V+ ++A+ Y M G NFT+P + KACA + G++ H I K G
Sbjct: 56 MIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRG 115
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+ SL+N+Y CG + + VF+ + ++V SW+AII+ + + G E +++F
Sbjct: 116 LEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFG 175
Query: 121 RLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G +P+ +V VL+ACT LG L + H + + NV V TSL+D+Y KC
Sbjct: 176 EMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKC 235
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +EK +F +M +K+ +S+S MI G A +G EAL +F +M E LKP+ +GVL
Sbjct: 236 GCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVL 295
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGT-TLIDMYAKCGRMAQACKVFREMKDK-D 297
SAC G ++ G+ + M+ + + ++ + + G + +A + R M K +
Sbjct: 296 SACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPN 355
Query: 298 QVVWNAVVSG 307
+VVW ++S
Sbjct: 356 EVVWRGLLSA 365
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/408 (50%), Positives = 284/408 (69%), Gaps = 1/408 (0%)
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+L+ YA+ G + AR +FD+MP ++ VSWS+M+ GY G +EAL +F MQ + ++P
Sbjct: 282 TLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRP 341
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ +VGVL+ACA LG LE G W +++ N LGT L+DMYAKCG M A +VF
Sbjct: 342 DDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVF 401
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+ MK+K+ + W ++ GL+M+G A +F Q+E+ G++P+ F+G LC CTH GLVD
Sbjct: 402 KVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVD 461
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+GR+ F+SM R + + P IEHYGCMVDLL R+G L+EA E+++ MPM+P+A++WGAL+AG
Sbjct: 462 KGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAG 521
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CR HK +LAE+V+ I LEP SG YVLL NIY+AS + A +IR +M +KG+ K
Sbjct: 522 CRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTP 581
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEEK 529
GCS VE+ GV+H+F+VGD SHP E+I SK DE+ ++++ G+VP VL DIEEEEK
Sbjct: 582 GCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEK 641
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKI 577
+ L+ HSEK+A+AF LI T+ IRI KNLRVC DCH KLISK+
Sbjct: 642 ENALSRHSEKMAIAFALINTSDDMPIRIVKNLRVCHDCHHVTKLISKV 689
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 180/355 (50%), Gaps = 38/355 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACA---------------REHD 45
+IR + A+ Y + G PT T P +LK+ A H
Sbjct: 177 LIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVHAHA 236
Query: 46 FQLG-----------VRSHS----------LIVKAGLDCDEFVKTSLLNLYVHCGYLADA 84
+LG +R H+ ++++ D +L+ Y G + DA
Sbjct: 237 VKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRVTDA 296
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+FD++P +N VSW+A+++GY+ G+ EA+ +F R+ G++PD +V VL AC QL
Sbjct: 297 RALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQL 356
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
G L KW+HGY+ VF+ T+LVD+YAKCG M+ A VF M EK++++W++MI
Sbjct: 357 GVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMI 416
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
+G A +G EAL++F M+R +KP+ +G L AC G ++ G M R +
Sbjct: 417 KGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGI 476
Query: 265 SNPVLGTT-LIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
+ ++D+ A+ G + +A ++ +M K D ++W A+++G + V++A
Sbjct: 477 KPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELA 531
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/517 (41%), Positives = 332/517 (64%), Gaps = 4/517 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + S+ + A Y + GF+P +TFP VLKAC + Q G + H + VK G
Sbjct: 76 LIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMG 135
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
CD +V+ SLL+ Y CG A +VFD++ ++VVSWT +ISGY+ G +EAIN+F
Sbjct: 136 FLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFL 195
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + P+ + V VL AC ++G LS K +HG V + G + V +LVD+Y KC
Sbjct: 196 KM---DVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCE 252
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +AR++FD++P++DIVSW+S+I G PK++L++FY+MQ ++P+ + VLS
Sbjct: 253 CLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLS 312
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASLGAL+ G W ++ER + +GT L+DMYAKCG + A +F + +++
Sbjct: 313 ACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFT 372
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM- 359
WNA++ GL+M+G+ A F + GI+PN TF+ +L C H+GLV EGR +F M
Sbjct: 373 WNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMI 432
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
S+ F+ +P +EHYGCM+DLL R+G LDEA++ I++MP+ P+ ++WGALL+ C+ + +L
Sbjct: 433 SQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVEL 492
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
++ +L+ L+ L+ +SG YVLLSNIY+ + +W+D ++R +M DKGI+K G S +EVDG
Sbjct: 493 SQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDG 552
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
HEFLVGD +H +E I+ L+ LA ++ G T
Sbjct: 553 EAHEFLVGDTNHSRNEDIHILLNILANQVYLEGHFST 589
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 184/369 (49%), Gaps = 17/369 (4%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLY-VHCGYLADALKVFDDIPDKNV--VSWTAIISGYINE 109
H+ ++ +GL DEFV + + + H G++ A F + D +V + + +I+ Y +
Sbjct: 25 HAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFD-FLNQTDLHVGTLPYNTLIAAYASS 83
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+ A ++ R++ G PD ++ VL ACT+ + + +HG + G +++V
Sbjct: 84 CTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQ 143
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
SL+ Y+ CG A RVFD+M +D+VSW+ +I GY G EA+++F M ++
Sbjct: 144 NSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKM---DVV 200
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P T V VL AC +G L +G + + F V+G L+DMY KC + +A K+
Sbjct: 201 PNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKL 260
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F E+ D+D V W +++SGL K + +F ++ G++P+ +L C G +
Sbjct: 261 FDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGAL 320
Query: 350 DEGRQFFNSMSRVFSLTPMIE---HYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
D GR + R IE H G +VD+ + G ++ A + +P N W
Sbjct: 321 DYGRWVQEYIER-----QGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIP-NRNIFTWN 374
Query: 406 ALLAGCRLH 414
ALL G +H
Sbjct: 375 ALLGGLAMH 383
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/511 (41%), Positives = 320/511 (62%), Gaps = 1/511 (0%)
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
+++ SWT++I+GY +EA+ + +L KP+ F+ +L A + I
Sbjct: 4 RDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 63
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
H + +V+V ++L+D+YA+CG M+ A VFDQ+ K+ VSW+++I G+A G
Sbjct: 64 HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDG 123
Query: 214 KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
+ L MF MQR + ++T V SA A +GALE G W + M ++ + +G T+
Sbjct: 124 ETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTI 183
Query: 274 IDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+DMYAK G M A KVF + KD V WN++++ + G + A F ++ KCG+ N
Sbjct: 184 LDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQ 243
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
TF+ +L C+H GLV EG+Q+F+ M + +L P I+HY +VDLLGR+G L++A I
Sbjct: 244 ITFLSILTACSHGGLVKEGKQYFDMM-KEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIF 302
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWND 453
MPM+P A VWGALL CR+HK + + + + L+P ++G VLL NIY+++ +W+
Sbjct: 303 KMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDA 362
Query: 454 AAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF 513
AA++R MM G++K CSWVE++ VH F+ D++HP SE+IY K +E++ +++ AG+
Sbjct: 363 AARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGY 422
Query: 514 VPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKL 573
VP TD+VL ++E+E+Q L HSEK+ALAF LI IRI KN+R+CGDCH A +
Sbjct: 423 VPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRY 482
Query: 574 ISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
ISK+ REI+VRD NRFH F GSCSC D+W
Sbjct: 483 ISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 164/317 (51%), Gaps = 1/317 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ ND A+ M F P FTF +LKA +G + H+L VK
Sbjct: 12 LIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYD 71
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++LL++Y CG + A+ VFD + KN VSW A+I+G+ +G+ E + MF
Sbjct: 72 WHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFA 131
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G + F+ V +A +G L KW+H ++ ++G+ + FV +++D+YAK G
Sbjct: 132 EMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSG 191
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M AR+VFD + +KD+V+W+SM+ +A G +EA+ F M++ + T + +L+
Sbjct: 192 SMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILT 251
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK-VFREMKDKDQV 299
AC+ G ++ G M+ + T++D+ + G + A +F+
Sbjct: 252 ACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAA 311
Query: 300 VWNAVVSGLSMNGYVKV 316
VW A++ M+ K+
Sbjct: 312 VWGALLGSCRMHKNAKI 328
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 113/220 (51%), Gaps = 4/220 (1%)
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M +D+ SW+S+I GYA N P EAL + M R KP +T +L A + + +G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + ++ + +G+ L+DMYA+CGRM A VF +++ K+ V WNA+++G +
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS-LTPMIE 370
G + +F ++++ G + T+ + G +++G+ M + L+ +
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ ++D+ +SG + +A ++ + + + + W ++L
Sbjct: 181 N--TILDMYAKSGSMIDARKVFDHVD-KKDLVTWNSMLTA 217
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/538 (41%), Positives = 333/538 (61%), Gaps = 18/538 (3%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINE-GNLEEAINMFRRLLHRG-LKPDSFSIVRVLTAC 141
A +VFD I + + W +I ++ EEA ++R++L RG PD + VL AC
Sbjct: 159 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 218
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+ S K +H + + G G +V+V L+ LY CG ++ AR+VFD+MPE+ +VSW+
Sbjct: 219 AYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWN 278
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
SMI G AL +F MQR + +P+ YTM VLSACA LG+L LG WA +F+ R
Sbjct: 279 SMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK 337
Query: 262 ---EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ + ++ +LI+MY KCG + A +VF+ M+ +D WNA++ G + +G + A
Sbjct: 338 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAM 397
Query: 319 GVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
F ++ ++ ++PN TFVGLL C H G V++GRQ+F+ M R + + P +EHYGC+V
Sbjct: 398 NFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIV 457
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLHKKTDLAEHVLNQLIALEPWN- 434
DL+ R+G + EA +++ SMPM+P+A++W +LL A C+ +L+E + +I + N
Sbjct: 458 DLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNE 517
Query: 435 ------SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
SG YVLLS +Y+++ +WND +R +M + GI+K GCS +E++G+ HEF GD
Sbjct: 518 SSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGD 577
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHV-LFDIEEE-EKQYFLACHSEKLALAFGL 546
SHP +++IY +L + +L++ G++P L D + K+Y L HSE+LA+AFGL
Sbjct: 578 TSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGL 637
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I P+ IRI KNLRVC DCHE KLISK+ EIIVRD RFH F +GSCSC D+W
Sbjct: 638 INLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 695
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 169/310 (54%), Gaps = 11/310 (3%)
Query: 12 QHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
+ A Y M G P TFPFVLKACA F G + H IVK G D +V
Sbjct: 189 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNG 248
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++LY CG L A KVFD++P++++VSW ++I + G + A+ +FR + R +PD
Sbjct: 249 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFRE-MQRSFEPD 307
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
+++ VL+AC LG LS W H ++ + +V V SL+++Y KCG++ A +
Sbjct: 308 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 367
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM--QRENLKPEYYTMVGVLSACASL 245
VF M ++D+ SW++MI G+A++G +EA++ F M +REN++P T VG+L AC
Sbjct: 368 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 427
Query: 246 GALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK-DQVVWN 302
G + G M R ++ P L ++D+ A+ G + +A + M K D V+W
Sbjct: 428 GFVNKGRQYFDMMVR-DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWR 486
Query: 303 AVVSGLSMNG 312
+++ G
Sbjct: 487 SLLDACCKKG 496
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 132/300 (44%), Gaps = 9/300 (3%)
Query: 136 RVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
R+ + D+S K +H + + +F+ ++ L + ++ A RVFD +
Sbjct: 107 RIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 166
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYN--MQRENLKPEYYTMVGVLSACASLGALEL 250
W+++I+ A + KE M Y ++R P+ +T VL ACA +
Sbjct: 167 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE 226
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + ++ F + + LI +Y CG + A KVF EM ++ V WN+++ L
Sbjct: 227 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 286
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
G A +F ++++ +P+G T +L C G + G + R + ++
Sbjct: 287 FGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 345
Query: 371 HY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
++++ + G L A ++ + M + + W A++ G H + + A + ++++
Sbjct: 346 VLVKNSLIEMYCKCGSLRMAEQVFQGM-QKRDLASWNAMILGFATHGRAEEAMNFFDRMV 404
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/594 (40%), Positives = 341/594 (57%), Gaps = 3/594 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQ-LGVRSHSLIVKAG-LDCDEFVKTSL 71
A+ + M G P +FTFP KA A +G + HSL ++ G L D FV +
Sbjct: 101 ALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAA 160
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
L++Y G L A +F ++P++NVV+W A+++ + +G E I + L G P+
Sbjct: 161 LDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNV 220
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
S AC LS + HG+V + G +V V S+VD Y KC KAR VFD
Sbjct: 221 VSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDG 280
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M ++ VSW SM+ YA NG +EA + +R +P + + L+ CA L L LG
Sbjct: 281 MGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLG 340
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ R+ +N + + L+DMY KCG + A ++F E ++ V WNA++ G +
Sbjct: 341 RALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHI 400
Query: 312 GYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
G + A VF + + G PN T V ++ C+ GL +G + F +M F + P E
Sbjct: 401 GDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTE 460
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
HY C+VDLLGR+G ++A+E+I+ MPM P+ VWGALL C++H KT+L +L L
Sbjct: 461 HYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFEL 520
Query: 431 EPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNS 490
+P +SGN+VLLSN+++++ +W +A IR M + GI+K GCSWV VVH F D
Sbjct: 521 DPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTK 580
Query: 491 HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTA 550
H + +I + L +L +++AAG++P T + L+D+EEEEK+ + HSEKLALAFGLI
Sbjct: 581 HEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIP 640
Query: 551 PKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P IRI KNLR+C DCH A K IS I GREIIVRDNNRFH F + CSC D+W
Sbjct: 641 PGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 174/403 (43%), Gaps = 8/403 (1%)
Query: 50 VRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINE 109
R+ LI A F+ L+NLY A A P VVS+TA ISG
Sbjct: 39 ARALRLIAPA---LSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQH 95
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST-AKWIHGYVNEAGK-GRNVF 167
G A++ F +L GL+P+ F+ A ST IH G + F
Sbjct: 96 GRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPF 155
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
V+ + +D+Y K G ++ AR +F +MP +++V+W++++ +G P E ++ ++ ++
Sbjct: 156 VSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAG 215
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
P + +ACA L LG F+ + F + + +++D Y KC +A
Sbjct: 216 GLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKAR 275
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
VF M ++ V W ++V+ + NG + AF + + G +P L C
Sbjct: 276 AVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLL 335
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+ GR R + I +VD+ G+ G +++A ++ P N + W A+
Sbjct: 336 GLHLGRALHAVAVRS-CIDANIFVASALVDMYGKCGCVEDAEQIFYETPQR-NLVTWNAM 393
Query: 408 LAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
+ G A V + +I + NY+ L N+ ++ +
Sbjct: 394 IGGYAHIGDAQNALLVFDDMIR-SGETAPNYITLVNVITSCSR 435
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 138/317 (43%), Gaps = 49/317 (15%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + N + A Y R G PT+F L CA LG H++ V++
Sbjct: 292 MVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC 351
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D + FV ++L+++Y CG + DA ++F + P +N+V+W A+I GY + G+ + A+ +F
Sbjct: 352 IDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFD 411
Query: 121 RLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAK 178
++ G P+ ++V V+T+C++ G + + E G +VDL +
Sbjct: 412 DMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGR 471
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G E+A V MP ++P +
Sbjct: 472 AGMEEQAYEVIQGMP----------------------------------MRPSISVWGAL 497
Query: 239 LSACASLGALELG-VWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMKD- 295
L AC G ELG + A E + S N VL L +M+A GR A+A + +EMK+
Sbjct: 498 LGACKMHGKTELGRIAAEKLFELDPQDSGNHVL---LSNMFASAGRWAEATDIRKEMKNV 554
Query: 296 ---KDQ----VVWNAVV 305
KD V W VV
Sbjct: 555 GIKKDPGCSWVTWKNVV 571
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/538 (41%), Positives = 333/538 (61%), Gaps = 18/538 (3%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINE-GNLEEAINMFRRLLHRG-LKPDSFSIVRVLTAC 141
A +VFD I + + W +I ++ EEA ++R++L RG PD + VL AC
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+ S K +H + + G G +V+V L+ LY CG ++ AR+VFD+MPE+ +VSW+
Sbjct: 162 AYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWN 221
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
SMI G AL +F MQR + +P+ YTM VLSACA LG+L LG WA +F+ R
Sbjct: 222 SMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK 280
Query: 262 ---EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ + ++ +LI+MY KCG + A +VF+ M+ +D WNA++ G + +G + A
Sbjct: 281 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAM 340
Query: 319 GVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
F ++ ++ ++PN TFVGLL C H G V++GRQ+F+ M R + + P +EHYGC+V
Sbjct: 341 NFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIV 400
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLHKKTDLAEHVLNQLIALEPWN- 434
DL+ R+G + EA +++ SMPM+P+A++W +LL A C+ +L+E + +I + N
Sbjct: 401 DLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNE 460
Query: 435 ------SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
SG YVLLS +Y+++ +WND +R +M + GI+K GCS +E++G+ HEF GD
Sbjct: 461 SSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGD 520
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHV-LFDIEEE-EKQYFLACHSEKLALAFGL 546
SHP +++IY +L + +L++ G++P L D + K+Y L HSE+LA+AFGL
Sbjct: 521 TSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGL 580
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I P+ IRI KNLRVC DCHE KLISK+ EIIVRD RFH F +GSCSC D+W
Sbjct: 581 INLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 169/310 (54%), Gaps = 11/310 (3%)
Query: 12 QHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
+ A Y M G P TFPFVLKACA F G + H IVK G D +V
Sbjct: 132 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNG 191
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++LY CG L A KVFD++P++++VSW ++I + G + A+ +FR + R +PD
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFRE-MQRSFEPD 250
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
+++ VL+AC LG LS W H ++ + +V V SL+++Y KCG++ A +
Sbjct: 251 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 310
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM--QRENLKPEYYTMVGVLSACASL 245
VF M ++D+ SW++MI G+A++G +EA++ F M +REN++P T VG+L AC
Sbjct: 311 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 370
Query: 246 GALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK-DQVVWN 302
G + G M R ++ P L ++D+ A+ G + +A + M K D V+W
Sbjct: 371 GFVNKGRQYFDMMVR-DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWR 429
Query: 303 AVVSGLSMNG 312
+++ G
Sbjct: 430 SLLDACCKKG 439
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 132/300 (44%), Gaps = 9/300 (3%)
Query: 136 RVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
R+ + D+S K +H + + +F+ ++ L + ++ A RVFD +
Sbjct: 50 RIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 109
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYN--MQRENLKPEYYTMVGVLSACASLGALEL 250
W+++I+ A + KE M Y ++R P+ +T VL ACA +
Sbjct: 110 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE 169
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + ++ F + + LI +Y CG + A KVF EM ++ V WN+++ L
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 229
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
G A +F ++++ +P+G T +L C G + G + R + ++
Sbjct: 230 FGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 371 HY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
++++ + G L A ++ + M + + W A++ G H + + A + ++++
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGM-QKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/589 (38%), Positives = 346/589 (58%), Gaps = 37/589 (6%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD--ALKVFDDIPDKNVVSWTAIISGYINEG 110
H +++ GLD ++ T L+ G D A +V + + +N WTA+I GY EG
Sbjct: 69 HGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEG 128
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+EAI M+ + + P SF+ +L AC + DL+ + H V+V
Sbjct: 129 KFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGN 188
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVS------------------------------- 199
+++D+Y KC +++ AR+VFD+MPE+D++S
Sbjct: 189 TMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVA 248
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W++M+ G+A N P+EAL+ F M++ ++ + T+ G +SACA LGA + A +
Sbjct: 249 WTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQ 308
Query: 260 RNEFLSNP--VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
++ + + V+G+ LIDMY+KCG + +A VF M +K+ +++++ GL+ +G + A
Sbjct: 309 KSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEA 368
Query: 318 FGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
+F + + I+PN TFVG L C+H+GLVD+GRQ F+SM + F + P +HY CMV
Sbjct: 369 LHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMV 428
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSG 436
DLLGR+G+L EA ELIK+M +EP+ VWGALL CR+H ++AE L LEP G
Sbjct: 429 DLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIG 488
Query: 437 NYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW-VEVDGVVHEFLVGDNSHPLSE 495
NY+LLSN+Y+++ W ++R ++ +KG++K SW V+ +G +H+F G+ +HP+S
Sbjct: 489 NYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSN 548
Query: 496 KIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVI 555
KI KL+EL +L G+ P V +D+ + K+ L H+EKLALAF L+TT I
Sbjct: 549 KIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTI 608
Query: 556 RIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I KNLR+C DCH+ ++L S++TG+ II+RDN RFH F G CSC DFW
Sbjct: 609 TIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 177/354 (50%), Gaps = 38/354 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ F AI Y MR E P +FTF +LKAC D LG + H+ +
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLR 179
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE------- 113
C +V +++++YV C + A KVFD++P+++V+SWT +I+ Y GN+E
Sbjct: 180 GFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFE 239
Query: 114 ------------------------EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
EA+ F R+ G++ D ++ ++AC QLG
Sbjct: 240 SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKY 299
Query: 150 AKWIHGYVNEAG--KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
A ++G +V + ++L+D+Y+KCGN+E+A VF M K++ ++SSMI G
Sbjct: 300 ADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGL 359
Query: 208 ASNGFPKEALDMF-YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
A++G +EAL +F Y + + +KP T VG L AC+ G ++ G M + F
Sbjct: 360 ATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQT-FGVQ 418
Query: 267 PVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
P T ++D+ + GR+ +A ++ + M + VW A++ ++ ++A
Sbjct: 419 PTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIA 472
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 159/397 (40%), Gaps = 70/397 (17%)
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
F +I ++ + +++IS + NL + + +L +GL + + +++ T+LG
Sbjct: 37 TFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLG- 95
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
+D Y ARRV + + ++ W+++I+G
Sbjct: 96 ------------------------VPMDPY--------ARRVIEPVQFRNPFLWTAVIRG 123
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
YA G EA+ M+ M++E + P +T +L AC ++ L LG + R
Sbjct: 124 YAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF 183
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKD------------------------------- 295
+G T+IDMY KC + A KVF EM +
Sbjct: 184 VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT 243
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG---LVDEG 352
KD V W A+V+G + N + A F ++EK GI+ + T G + C G D
Sbjct: 244 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 303
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
Q + +S + + ++D+ + G ++EA + SM N + +++ G
Sbjct: 304 VQI--AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVFTYSSMILGLA 360
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
H + A H+ + ++ + + + SH
Sbjct: 361 THGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSH 397
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/594 (38%), Positives = 346/594 (58%), Gaps = 36/594 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGF--LPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
++RG + + A+ + SMR +G P ++T+P LK+CA LG + HS +
Sbjct: 91 LLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVLGRQIHSSTAR 150
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
GLD + FV S +++Y CG DA ++F+++ ++VVSW A+ISG+ + G A+++
Sbjct: 151 LGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDV 210
Query: 119 FRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
FR L+ + KPD+ ++ +L + GK R +A
Sbjct: 211 FRELVALQCPKPDAGTMASILPS-------------------MGKARVEDIAL------- 244
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
+ VFD+M K ++SW++M+ Y +N EA+++F MQ++ ++P+ T+
Sbjct: 245 -------LKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLAT 297
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
VL +C + AL LG ++R S+ +L L+DMYA CG + +A VF M +D
Sbjct: 298 VLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRD 357
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V W +++S +G+ + A +F ++ G++P+ FV +L C+HAGL+D G+ +F
Sbjct: 358 VVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFY 417
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
SM+ F + P +EHY CMVDLLGR+G + EA++ I MP++PN VWGALL CR+H
Sbjct: 418 SMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNM 477
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
D+ + L+ L P +G YVLLSNIY+ + +W D + +RS+M KGI+K+ G S E+
Sbjct: 478 DIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAEL 537
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
VH F +GD SHP S+ IY KL EL +++ G+ P + L D+EEE+K+ L+ HS
Sbjct: 538 GDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHS 597
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
EKLA+AF LI T P IRI NLR C DCH A KLIS I GREII++D NR H
Sbjct: 598 EKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIH 651
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 157/379 (41%), Gaps = 83/379 (21%)
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK--PDSFSIVRVLTACTQL 144
V D PD+ V + ++ G +A+ +F + +G PD ++ L +C
Sbjct: 76 VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
L + IH G NVFVA S + +YA+CG + A ++F++M +D+VSW++MI
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195
Query: 205 QGYASNGFPKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
G+A G A+D+F + + KP+ TM +L
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASIL------------------------ 231
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
P +G A+ +A VF EM+ K + WNA+++ + N A +F +
Sbjct: 232 ---PSMGK------ARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMR 282
Query: 324 LEKCGIQPNGNTFVGLLCGC-----------------------------------THAGL 348
++K GI+P+ T +L C + G
Sbjct: 283 MQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGC 342
Query: 349 VDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM---PMEPNAIV 403
+ E R F+SM V S T +I Y GR G EA +L + M +EP++I
Sbjct: 343 LKEARDVFDSMGTRDVVSWTSIISAY-------GRHGHGREAIDLFEKMCGQGLEPDSIA 395
Query: 404 WGALLAGCRLHKKTDLAEH 422
+ A+LA C D+ +H
Sbjct: 396 FVAILAACSHAGLLDMGKH 414
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/528 (41%), Positives = 324/528 (61%), Gaps = 2/528 (0%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G ++ A ++FD++ W I+ GY+ G ++A++++ ++ H G++PD F+ V+
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
AC +L +L +HG+V + G V T L+ +Y K G + A +F M E+D+V
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+W+++I GF +AL F M +KP+ T+V LSAC LG LE G F
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
SN ++ +DM AKCG M +A +F EM ++ + W+ V+ G ++NG + A
Sbjct: 263 REEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKAL 322
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV--FSLTPMIEHYGCMV 376
+F +++ G+QPN TF+ +L C+H G V+EG Q+FN M++ ++ P EHY CMV
Sbjct: 323 ALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMV 382
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSG 436
DLLGRSG L+EA+ IK MP+E + +WGALL C +H+ L +HV + L L P +
Sbjct: 383 DLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIAS 442
Query: 437 NYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEK 496
+VLLSN+Y+A+ +W+ K+R M KG +K+ S VE +G +H GD SHP S
Sbjct: 443 YHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSAS 502
Query: 497 IYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIR 556
I +KL++L ++K+ G++P TD V D+E+EEK+ L+ HSEKLA+AF LI +PK IR
Sbjct: 503 ILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIR 562
Query: 557 IAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ KNLR+CGDCH KL+S+IT REII+RD NRFH F G CSCKDFW
Sbjct: 563 VMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 184/321 (57%), Gaps = 4/321 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+++G+V N A+ Y MR+ G P FTFPFV+KACA + G+ H +VK G
Sbjct: 106 IMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVVKHG 165
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ V+T L+ +YV G L A +F + ++++V+W A+I+ + G +A+ FR
Sbjct: 166 LEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQSFR 225
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+KPDS +IV L+AC LG L T + I+ + E G N+ V + +D+ AKCG
Sbjct: 226 EMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKCG 285
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M+KA +FD+MP+++++SWS++I GYA NG ++AL +F M+ + ++P Y T + VLS
Sbjct: 286 DMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLS 345
Query: 241 ACASLGALELGVWASSFMERNE---FLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DK 296
AC+ G + G +FM +++ ++D+ + G + +A + M +
Sbjct: 346 ACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEA 405
Query: 297 DQVVWNAVVSGLSMNGYVKVA 317
D +W A++ +++ +K+
Sbjct: 406 DPGIWGALLGACAIHQNIKLG 426
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/595 (38%), Positives = 347/595 (58%), Gaps = 4/595 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKA--CAREHDFQLGVRSHSLIVKAG-LDCDEFVKTS 70
A+ + +M G P +FTFP KA CA +G + H+L ++ G L D FV +
Sbjct: 95 ALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCA 154
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
+++Y G L A ++F+++P++NV++W A+++ + +G E + L G P+
Sbjct: 155 AMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPN 214
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S+ AC LS + HG+V G +V V+ ++VD Y KC KAR VFD
Sbjct: 215 VVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFD 274
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
M ++ VSW SMI YA +G ++AL ++ + +P + + VL+ CA L L
Sbjct: 275 GMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNF 334
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + R+ +N + + L+DMY KCG + A +VF +M +++ V WNA++ G +
Sbjct: 335 GRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAH 394
Query: 311 NGYVKVAFGVF-GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
G + A VF + G PN T V ++ C+ GL +G + F++M F + P
Sbjct: 395 IGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRT 454
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
EHY C+VDLLGR+G + A+E+I+ MPM P+ VWGALL C++H KT+L +L
Sbjct: 455 EHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFE 514
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
L+P +SGN+VLLSN+ +++ +W +A +R M + GI+K GCSW+ VVH F D
Sbjct: 515 LDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDT 574
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
H + +I + L +L +++A+G++P T + L+D+EEEEK+ + HSEKLALAFGLI
Sbjct: 575 KHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIHI 634
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P IRI KNLR+C DCH A K +S I GREIIVRDNNRFH F + CSCKD+W
Sbjct: 635 PPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCKDYW 689
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 180/410 (43%), Gaps = 11/410 (2%)
Query: 47 QLGVRSHSL---IVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAII 103
+LG +H+ ++ GL F+ L+NLY A A P+ VVS+TA I
Sbjct: 26 RLGRAAHARALRLLSPGLP--PFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFI 83
Query: 104 SGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL--TACTQLGDLSTAKWIHGYVNEAG 161
SG A++ F +L GL+P+ F+ AC + IH G
Sbjct: 84 SGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFG 143
Query: 162 K-GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF 220
+ FV+ + +D+Y K G + ARR+F++MP +++++W++++ +G P E +
Sbjct: 144 YLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAY 203
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
+ ++ P ++ +ACA L LG F+ F + + ++D Y KC
Sbjct: 204 FGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKC 263
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
+A VF M+ ++ V W +++ + +G + A V+ G +P +L
Sbjct: 264 RCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVL 323
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C ++ GR R + I +VD+ G+ G +++A ++ MP E N
Sbjct: 324 TTCAGLLGLNFGRALHAVAVRS-CIDANIFVASALVDMYGKCGGVEDAEQVFLDMP-ERN 381
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
+ W A++ G A V + +I S N++ L N+ +A +
Sbjct: 382 LVTWNAMIGGYAHIGDAQNALAVFDAMIR-SGGTSPNHITLVNVITACSR 430
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 41/299 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + + A+ Y RN G PT+F VL CA G H++ V++
Sbjct: 287 MIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSC 346
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D + FV ++L+++Y CG + DA +VF D+P++N+V+W A+I GY + G+ + A+ +F
Sbjct: 347 IDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFD 406
Query: 121 RLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAK 178
++ G P+ ++V V+TAC++ G + + E G +VDL +
Sbjct: 407 AMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGR 466
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G E+A + +MP ++P +
Sbjct: 467 AGMEERAYEIIQRMP----------------------------------MRPSISVWGAL 492
Query: 239 LSACASLGALELGVWASS--FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
L AC G ELG AS F + N VL L +M A GR A+A V +EMK+
Sbjct: 493 LGACKMHGKTELGRIASEKLFELDPQDSGNHVL---LSNMLASAGRWAEATDVRKEMKN 548
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/585 (40%), Positives = 339/585 (57%), Gaps = 36/585 (6%)
Query: 56 IVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE 113
++K + + + T L L H G L A +VF+ I N W AII Y N E
Sbjct: 11 MIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAIIRAYSNSDEPE 70
Query: 114 EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLV 173
A ++++L + +S++ +L AC L + A +HG V + G G +VF +L+
Sbjct: 71 LAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALL 130
Query: 174 DLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK------------------- 214
+YA CG + AR++FD +PE+D VSW+ MI GY +G K
Sbjct: 131 HVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTS 190
Query: 215 ------------EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
EAL + Y MQ + + + +L+ACA+LGAL+ G W ++ N
Sbjct: 191 LISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWLHFYVLNNG 250
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMK--DKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ V+G L++MY KCG M +A VF ++K KD +W A++ G +++G A
Sbjct: 251 VDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEW 310
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F ++ + GI+PN TF +L C++ GLV+EG++ F SM +++ P IEHYGCMVDLLG
Sbjct: 311 FNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLG 370
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
RSG+LDEA ELIK MPM+P+A++WGALL C +H+ L V L+ ++ +SG Y+
Sbjct: 371 RSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQ 430
Query: 441 LSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSK 500
L+ I +A KW +AA++R M G+ G S V ++G+VHEFL G HP E+I K
Sbjct: 431 LATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGIVHEFLAGHQDHPQMEQIQLK 490
Query: 501 LDELATKLKA-AGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAK 559
L ++A +L+ G+ P T +L D+E EEK+ +A HSEKLA+AFGLI T P IR+ K
Sbjct: 491 LKQIAERLRQDEGYEPATKDLLLDLENEEKETAMAQHSEKLAIAFGLINTKPGTTIRVIK 550
Query: 560 NLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
NLR+C DCH KL+S+I REII+RD RFH F +GSCSCKD+W
Sbjct: 551 NLRICRDCHTVAKLVSQIYSREIIMRDRVRFHHFRDGSCSCKDYW 595
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 176/344 (51%), Gaps = 39/344 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + ++D + A Y M + ++TFPF+L+AC ++ H L++K G
Sbjct: 59 IIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLG 118
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--------------------------- 93
D F +LL++Y CG + A ++FD+IP+
Sbjct: 119 FGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFL 178
Query: 94 ----KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
KNVVSWT++ISG + G EA+++ + + G + D +I +LTAC LG L
Sbjct: 179 DMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQ 238
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGY 207
+W+H YV G + + +LV++Y KCG+ME+A VF ++ +KD+ W++MI G+
Sbjct: 239 GRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGF 298
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS-N 266
A +G EAL+ F M+RE ++P T VL AC+ G +E G F F + N
Sbjct: 299 AIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEG--KELFKSMKCFYNVN 356
Query: 267 PVLG--TTLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSG 307
P + ++D+ + GR+ +A ++ ++M K V+W A++
Sbjct: 357 PSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKA 400
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/538 (41%), Positives = 333/538 (61%), Gaps = 18/538 (3%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINE-GNLEEAINMFRRLLHRG-LKPDSFSIVRVLTAC 141
A +VFD I + + W +I ++ EEA ++R++L RG PD + VL AC
Sbjct: 93 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 152
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+ S K +H + + G G +V+V L+ LY CG ++ AR+VFD+MPE+ +VSW+
Sbjct: 153 AYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWN 212
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
SMI G AL +F MQR + +P+ YTM VLSACA LG+L LG WA +F+ R
Sbjct: 213 SMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK 271
Query: 262 ---EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ + ++ +LI+MY KCG + A +VF+ M+ +D WNA++ G + +G + A
Sbjct: 272 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAM 331
Query: 319 GVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
F ++ ++ ++PN TFVGLL C H G V++GRQ+F+ M R + + P +EHYGC+V
Sbjct: 332 NFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIV 391
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLHKKTDLAEHVLNQLIALEPWN- 434
DL+ R+G + EA +++ SMPM+P+A++W +LL A C+ +L+E + +I + N
Sbjct: 392 DLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNE 451
Query: 435 ------SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
SG YVLLS +Y+++ +WND +R +M + GI+K GCS +E++G+ HEF GD
Sbjct: 452 SSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGD 511
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHV-LFDIEEE-EKQYFLACHSEKLALAFGL 546
SHP +++IY +L + +L++ G++P L D + K+Y L HSE+LA+AFGL
Sbjct: 512 TSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGL 571
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I P+ IRI KNLRVC DCHE KLISK+ EIIVRD RFH F +GSCSC D+W
Sbjct: 572 INLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 629
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 169/310 (54%), Gaps = 11/310 (3%)
Query: 12 QHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
+ A Y M G P TFPFVLKACA F G + H IVK G D +V
Sbjct: 123 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNG 182
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++LY CG L A KVFD++P++++VSW ++I + G + A+ +FR + R +PD
Sbjct: 183 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFRE-MQRSFEPD 241
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
+++ VL+AC LG LS W H ++ + +V V SL+++Y KCG++ A +
Sbjct: 242 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 301
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM--QRENLKPEYYTMVGVLSACASL 245
VF M ++D+ SW++MI G+A++G +EA++ F M +REN++P T VG+L AC
Sbjct: 302 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 361
Query: 246 GALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK-DQVVWN 302
G + G M R ++ P L ++D+ A+ G + +A + M K D V+W
Sbjct: 362 GFVNKGRQYFDMMVR-DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWR 420
Query: 303 AVVSGLSMNG 312
+++ G
Sbjct: 421 SLLDACCKKG 430
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 132/300 (44%), Gaps = 9/300 (3%)
Query: 136 RVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
R+ + D+S K +H + + +F+ ++ L + ++ A RVFD +
Sbjct: 41 RIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 100
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYN--MQRENLKPEYYTMVGVLSACASLGALEL 250
W+++I+ A + KE M Y ++R P+ +T VL ACA +
Sbjct: 101 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE 160
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + ++ F + + LI +Y CG + A KVF EM ++ V WN+++ L
Sbjct: 161 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 220
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
G A +F ++++ +P+G T +L C G + G + R + ++
Sbjct: 221 FGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 279
Query: 371 HY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
++++ + G L A ++ + M + + W A++ G H + + A + ++++
Sbjct: 280 VLVKNSLIEMYCKCGSLRMAEQVFQGM-QKRDLASWNAMILGFATHGRAEEAMNFFDRMV 338
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/538 (41%), Positives = 333/538 (61%), Gaps = 18/538 (3%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINE-GNLEEAINMFRRLLHRG-LKPDSFSIVRVLTAC 141
A +VFD I + + W +I ++ EEA ++R++L RG PD + VL AC
Sbjct: 79 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 138
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+ S K +H + + G G +V+V L+ LY CG ++ AR+VFD+MPE+ +VSW+
Sbjct: 139 AYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWN 198
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
SMI G AL +F MQR + +P+ YTM VLSACA LG+L LG WA +F+ R
Sbjct: 199 SMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK 257
Query: 262 ---EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ + ++ +LI+MY KCG + A +VF+ M+ +D WNA++ G + +G + A
Sbjct: 258 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAM 317
Query: 319 GVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
F ++ ++ ++PN TFVGLL C H G V++GRQ+F+ M R + + P +EHYGC+V
Sbjct: 318 NFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIV 377
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLHKKTDLAEHVLNQLIALEPWN- 434
DL+ R+G + EA +++ SMPM+P+A++W +LL A C+ +L+E + +I + N
Sbjct: 378 DLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNE 437
Query: 435 ------SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
SG YVLLS +Y+++ +WND +R +M + GI+K GCS +E++G+ HEF GD
Sbjct: 438 SSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGD 497
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHV-LFDIEEE-EKQYFLACHSEKLALAFGL 546
SHP +++IY +L + +L++ G++P L D + K+Y L HSE+LA+AFGL
Sbjct: 498 TSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGL 557
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I P+ IRI KNLRVC DCHE KLISK+ EIIVRD RFH F +GSCSC D+W
Sbjct: 558 INLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 615
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 169/310 (54%), Gaps = 11/310 (3%)
Query: 12 QHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
+ A Y M G P TFPFVLKACA F G + H IVK G D +V
Sbjct: 109 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNG 168
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++LY CG L A KVFD++P++++VSW ++I + G + A+ +FR + R +PD
Sbjct: 169 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFRE-MQRSFEPD 227
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
+++ VL+AC LG LS W H ++ + +V V SL+++Y KCG++ A +
Sbjct: 228 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 287
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM--QRENLKPEYYTMVGVLSACASL 245
VF M ++D+ SW++MI G+A++G +EA++ F M +REN++P T VG+L AC
Sbjct: 288 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 347
Query: 246 GALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK-DQVVWN 302
G + G M R ++ P L ++D+ A+ G + +A + M K D V+W
Sbjct: 348 GFVNKGRQYFDMMVR-DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWR 406
Query: 303 AVVSGLSMNG 312
+++ G
Sbjct: 407 SLLDACCKKG 416
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 133/299 (44%), Gaps = 12/299 (4%)
Query: 137 VLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
VL C+ D+S K +H + + +F+ ++ L + ++ A RVFD +
Sbjct: 31 VLQTCS---DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 87
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYN--MQRENLKPEYYTMVGVLSACASLGALELG 251
W+++I+ A + KE M Y ++R P+ +T VL ACA + G
Sbjct: 88 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 147
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ ++ F + + LI +Y CG + A KVF EM ++ V WN+++ L
Sbjct: 148 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 207
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G A +F ++++ +P+G T +L C G + G + R + ++
Sbjct: 208 GEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDV 266
Query: 372 Y--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
++++ + G L A ++ + M + + W A++ G H + + A + ++++
Sbjct: 267 LVKNSLIEMYCKCGSLRMAEQVFQGM-QKRDLASWNAMILGFATHGRAEEAMNFFDRMV 324
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/560 (40%), Positives = 344/560 (61%), Gaps = 13/560 (2%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHC-----GYLADALKVFDDIPDKNVVSWTAIISG 105
R H I+K+ D SL L + C L+ A VF IP + +++ II
Sbjct: 6 RLHCYIIKSSKQNDPL---SLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRS 62
Query: 106 YINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+ + +++ F + G+ D+F+ VL AC++L +H + + G G +
Sbjct: 63 H-SRFFPSHSLSYFFSMRSNGIPLDNFTFPFVLKACSRL---QINLHLHSLIVKYGLGSD 118
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
+FV +L+ +Y CG++E A +VFD+M E+D VSWS++I + +NG+ EALD+F MQ
Sbjct: 119 IFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQL 178
Query: 226 EN-LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
E+ + P+ TM+ V+SA + LG LELG W +F+ R F + LGT LIDM+++CG +
Sbjct: 179 EDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSID 238
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
++ VF +M ++ + W A+++GL ++G A +F + K G+QP+ TF G+L C+
Sbjct: 239 ESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACS 298
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
H GLV EG F S+ +V+ + P+++HYGCMVD+LGR+G L+EA++ ++ MPM+PN+I+W
Sbjct: 299 HGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIW 358
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
LL C H LAE V ++ + +G+ VLLSN+Y A+ +W + A IRS M +K
Sbjct: 359 RTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREK 418
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
I K GCS + VD +HEF+ GDNSHP SE I L + L+ G++ T +VL DI
Sbjct: 419 RIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDI 478
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
EEEE+++ L+ HSEKLA+AF +++ K IRI KNLR+C DCH +K IS R+II+
Sbjct: 479 EEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKIII 538
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD NRFH F +G CSC D+W
Sbjct: 539 RDRNRFHHFEKGLCSCHDYW 558
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 198/327 (60%), Gaps = 8/327 (2%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
H++ ++ SMR+ G NFTFPFVLKAC+R Q+ + HSLIVK GL D FV+ +L
Sbjct: 69 SHSLSYFFSMRSNGIPLDNFTFPFVLKACSR---LQINLHLHSLIVKYGLGSDIFVQNAL 125
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL-LHRGLKPD 130
+ +Y +CG L A+KVFD++ +++ VSW+ +I+ ++N G EA+++F ++ L + PD
Sbjct: 126 ICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPD 185
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+++ V++A + LGDL +W+ ++ G G +V + T+L+D++++CG+++++ VF+
Sbjct: 186 EVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFE 245
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M +++++W+++I G +G EAL MF++M++ ++P+Y T GVL AC+ G ++
Sbjct: 246 KMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKE 305
Query: 251 GVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSG 307
G W R + +P+L ++D+ + G + +A M K + ++W ++
Sbjct: 306 G-WDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGA 364
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+ + +A V ++ K NG+
Sbjct: 365 CVNHNNLGLAEKVKAKISKISSSQNGD 391
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/611 (36%), Positives = 345/611 (56%), Gaps = 34/611 (5%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY------- 80
P F VL+ CA D + G R H I+++G+ D + ++L++Y CG
Sbjct: 124 PNAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRA 183
Query: 81 ------------------------LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
L A ++FD+ ++V SW I+SG + G+ EA+
Sbjct: 184 FGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEAL 243
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
++++ G+ +++ V L + +HG V A + FV SL+D+Y
Sbjct: 244 GRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMY 303
Query: 177 AKCGNMEKARRVFDQ---MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
KCG ME A +FD+ E +WS+M+ GY NG +EAL+ F M RE + +
Sbjct: 304 CKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQF 363
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
+ V SACA+ G +E G F+E+ + L + ++DMY+K G + AC++FR
Sbjct: 364 ILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSA 423
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
+ K+ +W ++ + +G ++A +F +++ I PN T V +L C+H+GLV +G
Sbjct: 424 QTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGY 483
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+FN M + + P EHY CMVDL GR+G LD+A I+ + A+VW LL+ CRL
Sbjct: 484 HYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRL 543
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
HK + A+ +L+ LE +++G+YVL+SN+Y+ ++KW D K+RS M ++ ++K G S
Sbjct: 544 HKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQS 603
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
W+ + VVH F+ D SHP S +IY+ L++L +LK G+ TD V+ DIEEE+++ L
Sbjct: 604 WIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSL 663
Query: 534 ACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF 593
HSEKLA+AFG+I+T +RI KNLRVC DCHEAIK I++ T REI+VRD RFH F
Sbjct: 664 KFHSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHF 723
Query: 594 IEGSCSCKDFW 604
+G CSC+DFW
Sbjct: 724 KDGQCSCEDFW 734
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 166/322 (51%), Gaps = 5/322 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G + + A+ M G +N+T+ V LG + H +V A
Sbjct: 229 IVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAV 288
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD---DIPDKNVVSWTAIISGYINEGNLEEAIN 117
L+ D FV SL+++Y CG + AL +FD D + +W+ +++GY+ G EEA+
Sbjct: 289 LEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALE 348
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
FRR+L G+ F + V +AC G + + +HG+V + G + +A+++VD+Y+
Sbjct: 349 FFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYS 408
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
K G++E A R+F K++ W++M+ YAS+G + AL++F M+ E + P T+V
Sbjct: 409 KSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVA 468
Query: 238 VLSACASLGALELGVWASSFM-ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-D 295
VLSAC+ G + G + M E + N ++D+Y + G + +A E K
Sbjct: 469 VLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKIS 528
Query: 296 KDQVVWNAVVSGLSMNGYVKVA 317
+ VVW ++S ++ +++ A
Sbjct: 529 HEAVVWKTLLSACRLHKHIEYA 550
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 184/408 (45%), Gaps = 45/408 (11%)
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR--GLKPDSFSIVRVL 138
L +A +VFD P +++ +WT+IISG EG + + F +L P++F + VL
Sbjct: 74 LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK--- 195
C LGD+ + + IHG++ +G +V + +++D+YAKCG+ +ARR F M +K
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDAT 193
Query: 196 ----------------------------DIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
D+ SW++++ G +G EAL M R
Sbjct: 194 SWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAG 253
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+ YT V + L + +LG + + +G +L+DMY KCG M A
Sbjct: 254 VTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESAL 313
Query: 288 KVFREMKD---KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
+F D Q W+ +V+G NG + A F ++ + G+ + C
Sbjct: 314 SIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACA 373
Query: 345 HAGLVDEGRQ---FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
+AG+V++GRQ F + F P+ +VD+ +SG L++A + +S + N
Sbjct: 374 NAGMVEQGRQVHGFVEKLGHRFD-APLA---SAIVDMYSKSGSLEDACRIFRSAQTK-NV 428
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+W +L H + +A + +++ A E L++ + + SH
Sbjct: 429 ALWTTMLCSYASHGQGRMALEIFSRMKA-EKIMPNEITLVAVLSACSH 475
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/605 (38%), Positives = 350/605 (57%), Gaps = 17/605 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++RG+V + AI + M + +L A V +
Sbjct: 118 LLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGR--------VNEARRLFDEM 169
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D T++L+ Y G + +A +FD++P +NVVSWTA+ISGY G +N+ R
Sbjct: 170 PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGE----VNLAR 225
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L + + S +L Q G + A + + E V +++ + + G
Sbjct: 226 KLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE----HPVAACNAMMVGFGQRG 281
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+ VF++M E+D +WS+MI+ Y N F EAL F M ++P Y +++ +L+
Sbjct: 282 MVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILT 341
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CA+L L+ G + M R F + + LI MY KCG + +A +VF + KD V+
Sbjct: 342 VCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVM 401
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++++G + +G + A G+F + G+ P+G T++G L C++ G V EGR+ FNSM+
Sbjct: 402 WNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMT 461
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
S+ P EHY CMVDLLGRSG ++EA +LIK+MP+EP+A++WGAL+ CR+H+ ++A
Sbjct: 462 VNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L+ LEP N+G YVLLS+IY++ +W DA+K+R + + + K GCSW+E D
Sbjct: 522 EFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKR 581
Query: 481 VHEFLVGDN-SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F GD +HP I L++L L +G+ VL DI+EE+K + L HSE+
Sbjct: 582 VHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSER 641
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
A+A+GL+ IR+ KNLRVCGDCH AIKLI+KIT REII+RD NRFH F +G CS
Sbjct: 642 QAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCS 701
Query: 600 CKDFW 604
C+D+W
Sbjct: 702 CRDYW 706
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 164/396 (41%), Gaps = 72/396 (18%)
Query: 78 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
G + A F+ +P + S+ A+++GY + A+ +FRR+ R L + I +
Sbjct: 30 AGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGL 89
Query: 138 LTACTQLGDLSTA--------------KWIHGYVN-----------EAGKGRNVFVATSL 172
L D + A + GYV + RN T L
Sbjct: 90 SLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVL 149
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ G + +ARR+FD+MP++D+V+W++M+ GY G EA +F M + N+
Sbjct: 150 LGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNV---- 205
Query: 233 YTMVGVLSACASLGALELGVWASSFM-ERNE-------------------------FLSN 266
+ ++S A G + L M ERNE +
Sbjct: 206 VSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEH 265
Query: 267 PVLG-TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
PV ++ + + G + A VF +M ++D W+A++ N ++ A F ++
Sbjct: 266 PVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREML 325
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR------VFSLTPMIEHYGCMVDLL 379
G++PN + + +L C ++D GR+ +M R VF+++ +I Y
Sbjct: 326 WRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMY------- 378
Query: 380 GRSGQLDEAHELIKSMPMEPNAIV-WGALLAGCRLH 414
+ G LD+A + + EP IV W +++ G H
Sbjct: 379 IKCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQH 412
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 36/244 (14%)
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ GN+E AR F+ MP + S+++++ GY N P AL +F M +L Y ++
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA-SYNALI 86
Query: 237 GVLS--------ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
LS A A+L ++ SF T+L+ Y + G +A A +
Sbjct: 87 SGLSLRRQTLPDAAAALASIPFPPSVVSF-------------TSLLRGYVRHGLLADAIR 133
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+F++M +++ V + ++ GL G V A +F ++ + + +L G AG
Sbjct: 134 LFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVV----AWTAMLSGYCQAGR 189
Query: 349 VDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
+ E R F+ M + V S T MI Y ++G+++ A +L + MP E N + W A
Sbjct: 190 ITEARALFDEMPKRNVVSWTAMISGY-------AQNGEVNLARKLFEVMP-ERNEVSWTA 241
Query: 407 LLAG 410
+L G
Sbjct: 242 MLVG 245
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/555 (39%), Positives = 332/555 (59%), Gaps = 1/555 (0%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
++H+ +V G + T LL L G +A ++F + D + + ++I G
Sbjct: 28 QAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKFG 87
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+A+ +RR+L + P +++ V+ AC L L +H +V +G + FV
Sbjct: 88 FSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQA 147
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+L+ YAK AR+VFD+MP++ IV+W+SMI GY NG EA+++F M+ ++P
Sbjct: 148 ALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEP 207
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ T V VLSAC+ LG+L+ G W + + N VL T+L++M+++CG + +A VF
Sbjct: 208 DSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVF 267
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M + + V+W A++SG M+GY A VF +++ G+ PN TFV +L C HAGL+D
Sbjct: 268 YSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLID 327
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM-EPNAIVWGALLA 409
EGR F SM + + + P +EH+ CMVD+ GR G L+EA++ +K + E VW A+L
Sbjct: 328 EGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLG 387
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKI 469
C++HK DL V LI EP N G+YVLLSN+Y+ + + + +R++M +G++K
Sbjct: 388 ACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQ 447
Query: 470 RGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEK 529
G S ++VD + F +GD SHP + +IY LDEL + K AG+ P + + ++E EE+
Sbjct: 448 VGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDELIWRCKDAGYAPVPESAMHELEGEER 507
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+Y L HSEKLA+AFGL+ T +RI KNLR+C DCH AIK IS + REIIVRD R
Sbjct: 508 EYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDCHSAIKFISAVMNREIIVRDKLR 567
Query: 590 FHCFIEGSCSCKDFW 604
FH F EGSCSC D+W
Sbjct: 568 FHHFREGSCSCSDYW 582
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 174/304 (57%), Gaps = 9/304 (2%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ FY M +P+ +TF V+KACA +G HS + +G D FV+ +L+
Sbjct: 92 AVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIA 151
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
Y A KVFD++P +++V+W ++ISGY G EA+ +F ++ ++PDS +
Sbjct: 152 FYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSAT 211
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
V VL+AC+QLG L W+H + +G NV +ATSLV+++++CG++ +AR VF M
Sbjct: 212 FVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSMI 271
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG-- 251
E ++V W++MI GY +G+ EA+++F+ M+ + P T V VLSACA G ++ G
Sbjct: 272 EGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRS 331
Query: 252 VWASSFMERNEFLSNPVL--GTTLIDMYAKCGRMAQACKVFREMKDKDQV--VWNAVVSG 307
V+AS + E+ P + ++DM+ + G + +A + + + + V VW A++
Sbjct: 332 VFASM---KQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGA 388
Query: 308 LSMN 311
M+
Sbjct: 389 CKMH 392
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 124/283 (43%), Gaps = 33/283 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N A+E +N MR P + TF VL AC++ G H IV +G
Sbjct: 180 MISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSG 239
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + + TSL+N++ CG + A VF + + NVV WTA+ISGY G EA+ +F
Sbjct: 240 ITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFH 299
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ RG+ P+S + V VL+AC G + +GR+VF S+ Y
Sbjct: 300 RMKARGVVPNSVTFVAVLSACAHAGLID-------------EGRSVF--ASMKQEYGVVP 344
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E M+ + G EA + + L P +T +L
Sbjct: 345 GVEH---------------HVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWT--AMLG 387
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
AC +LGV + + E NP L +MYA GRM
Sbjct: 388 ACKMHKNFDLGVEVAENLINAE-PENPGHYVLLSNMYALAGRM 429
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/605 (34%), Positives = 361/605 (59%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ N + + +M + ++ P + F ++ +C+ G + H +K+
Sbjct: 99 LMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKS 158
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL ++VK +L+ +Y + A+ V+ ++P +V S+ II+G + G EA+ +
Sbjct: 159 GLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVL 218
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R++ + D+ + V C+ L DL +H + G + FV+++++D+Y KC
Sbjct: 219 DRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKC 278
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+ AR+VF+++ K++VSW++++ Y+ NG +EAL+ F M+ + L P YT +L
Sbjct: 279 GNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLL 338
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
++CA + AL G + ++++ F + ++G LI+MY+K G + A KVF EM +D +
Sbjct: 339 NSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSI 398
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W+A++ GLS +G + A VF ++ P+ TFVG+L C H G V EG + N +
Sbjct: 399 TWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQL 458
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + P +EHY C+V LL ++G+LDEA +KS P++ + + W LL+ C +H+ L
Sbjct: 459 MKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGL 518
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ V ++ ++P + G Y+LLSN+Y+ + +W+ KIR +M ++ ++K G SW+E+
Sbjct: 519 GKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRN 578
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F+ +HP S +IY K+ EL T ++ G+VP V D+E+E+K+ +++ HSEK
Sbjct: 579 SIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEK 638
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GL+ T IR+ KNLR+C DCH A+KLISK+T R IIVRD NRFHCF +G CS
Sbjct: 639 LAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCS 698
Query: 600 CKDFW 604
C D+W
Sbjct: 699 CADYW 703
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 206/415 (49%), Gaps = 7/415 (1%)
Query: 36 VLKACAREHDFQLGVRSHS-LIVKAGLDCDEFVKT-SLLNLYVHCGYLADALKVFDDIPD 93
+LK A + + G H+ LI+ D V+ SL+NLY C + A +FD +
Sbjct: 31 LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKW 152
+NVVSW A+++GY + G + E + +F+ ++ ++P+ + ++++C+ G +
Sbjct: 91 RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
HGY ++G + +V +L+ +Y++ +++ A V+ ++P D+ S++ +I G NG+
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGY 210
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
P EAL++ M E + + T V C+ L L LG+ M R + + +
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSA 270
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
+IDMY KCG + A KVF ++ K+ V W A+++ S NG + A F ++E G+ PN
Sbjct: 271 IIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPN 330
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
TF LL C + G+ + + I ++++ +SG ++ AH++
Sbjct: 331 EYTFAVLLNSCAGISALGHGKLLHTRIKKS-GFEDHIIVGNALINMYSKSGSIEAAHKVF 389
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
M ++I W A++ G H A V +++A + +YV + SA
Sbjct: 390 LEMICR-DSITWSAMICGLSHHGLGREALVVFQEMLAAK--ECPHYVTFVGVLSA 441
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 135/282 (47%), Gaps = 11/282 (3%)
Query: 135 VRVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+++L +L K IH ++ N+A K N+ SL++LYAKC + AR +FD
Sbjct: 29 IQLLKVSADTKNLKFGKMIHAHLIITNQATKD-NIVQVNSLINLYAKCDQIMVARILFDG 87
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALEL 250
M ++++VSW +++ GY NG E L +F M + ++P Y ++S+C+ G +
Sbjct: 88 MRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVE 147
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + ++ + + + LI MY++ + A V+ E+ D +N +++GL
Sbjct: 148 GWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLE 207
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
NGY A V ++ I + T+V C+H + G Q R+F +
Sbjct: 208 NGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVH---CRMFRTGAEYD 264
Query: 371 HY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ ++D+ G+ G + A ++ + + N + W A+LA
Sbjct: 265 SFVSSAIIDMYGKCGNILNARKVFNRLQTK-NVVSWTAILAA 305
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/618 (38%), Positives = 360/618 (58%), Gaps = 44/618 (7%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALK 86
LP TF +L + Q + H+ +V L + + SL++ Y+ +A
Sbjct: 71 LPNPQTFSLLLNQRPKLSPLQ---QIHAQVVTQALSSNASLTASLIHCYLCAKNHPNARI 127
Query: 87 VFDDIPDKN--VVSWTAIISGYINEGNLEEAINMFRRLLH----RGLKPDSFSIVRVLTA 140
+FD P + + W +I Y N +E I++F R+L + PD ++ V+T+
Sbjct: 128 LFDHYPSPSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITS 187
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
C+ L + +HG V ++G N++V S++++ + ME AR+VF+QM E+D+ SW
Sbjct: 188 CSHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSW 247
Query: 201 SSMIQGYASNG--------------------------------FPKEALDMFYNMQ-REN 227
+S++ GYA +G +P EAL F NM +
Sbjct: 248 TSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYP-EALTFFCNMLCDDR 306
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+ P +V VLSACA LGAL+ G W ++++ + + T LIDMYAKCGR+ A
Sbjct: 307 VNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCAS 366
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+VF + +D + + +++SGLS +G K A VF Q+ + PN T +G+L GC+H+G
Sbjct: 367 RVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSG 426
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
LV+EG +M ++ + P IEHYGC +DLLGR+G L+ A E++K+MPMEP+ ++W AL
Sbjct: 427 LVEEGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRAL 486
Query: 408 LAGCRLHKKTDLAEHVLNQLIALEPWN-SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
L+ R+H +L E +++ + L+ + +G VLLSN+Y++ +W ++R +M D+
Sbjct: 487 LSASRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRS 546
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
+ GCSW+EV+G+VHEF V D HP +I +KL+E+ +L G+ T V FD+ E
Sbjct: 547 ESSPGCSWIEVNGLVHEFRVADQLHPQIVEIRNKLNEILKRLSQIGYSANTMQVSFDLNE 606
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
EEK+ +A HSEKLA+AFGL++T P +IRI KNLR C DCH A+K IS++ GREI+VRD
Sbjct: 607 EEKEQAVAWHSEKLAIAFGLMSTEPGTLIRIVKNLRTCEDCHSALKTISQVYGREIVVRD 666
Query: 587 NNRFHCFIEGSCSCKDFW 604
+RFH FIEG CSCKDFW
Sbjct: 667 RSRFHTFIEGDCSCKDFW 684
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 3/209 (1%)
Query: 1 MIRGFVSNDCFQHAIEFY-NSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI GF+ + A+ F+ N + ++ P VL ACA G H I K
Sbjct: 281 MISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKI 340
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G+ + T+L+++Y CG + A +VF+ I ++V+S+T++ISG G ++A+ +F
Sbjct: 341 GIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVF 400
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAK 178
++L + P+ +I+ VL C+ G + I + G + +DL +
Sbjct: 401 YQMLDENVMPNEITILGVLNGCSHSGLVEEGSSILANMESLWGIAPKIEHYGCYIDLLGR 460
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQG 206
G +E+A V MP E DIV W +++
Sbjct: 461 AGYLERALEVVKTMPMEPDIVIWRALLSA 489
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/493 (44%), Positives = 317/493 (64%), Gaps = 6/493 (1%)
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A+ + RR R PD+ + ++ AC +L L + +H + G VFV SLV
Sbjct: 791 ALELHRR---RLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVH 847
Query: 175 LYAKCGNMEKARRVFDQMPEK--DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
LY CG E A +VFD+MP + ++VSW+SM+ +A+NG P E L +F+ M + P+
Sbjct: 848 LYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDG 907
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+T+V VL+ACA GAL LG ++E+ + N + LID+YAKCG + A ++F E
Sbjct: 908 FTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEE 967
Query: 293 MKDKDQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
M VV W +++ GL+ NG+ K A +F +E+ + P T VG+L C+H GLVD+
Sbjct: 968 MGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDD 1027
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G ++F+ M + ++P IEH GCMVDLLGR+G+++EA++ I +MP+EPNA+VW LL C
Sbjct: 1028 GFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSC 1087
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
+HKK +L + +L+ L+P +SG+YVLLSN+Y+A W D +R M ++K G
Sbjct: 1088 AMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPG 1147
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
S VE+ V+EF++GD SHP SE+IY L E+A +L+ G++P T +VL DIEEEEK+
Sbjct: 1148 HSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKET 1207
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L HSE+LA+AF L+ + P IRI KNLR+CGDCH A LISK+ REIIVRD +RFH
Sbjct: 1208 ALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFH 1267
Query: 592 CFIEGSCSCKDFW 604
F G+CSCKD+W
Sbjct: 1268 HFQGGACSCKDYW 1280
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 171/296 (57%), Gaps = 7/296 (2%)
Query: 22 RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYL 81
R LP T+P +++ACAR + G H+ K G FV+ SL++LY CG
Sbjct: 796 RRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLF 855
Query: 82 ADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
A KVFD++P +N+VSW ++++ + G E + +F +L PD F+IV VLT
Sbjct: 856 ESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLT 915
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-EKDIV 198
AC + G L+ + +H YV + G N V+ +L+DLYAKCG++ ARR+F++M + +V
Sbjct: 916 ACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVV 975
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
SW+S+I G A+NGF KEAL++F M+RE L P TMVGVL AC+ G ++ G M
Sbjct: 976 SWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRM 1035
Query: 259 ERNEFLSNPV--LGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMN 311
+ + +S + LG ++D+ + GR+ +A M + + VVW ++ +M+
Sbjct: 1036 KEDYGISPRIEHLG-CMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMH 1090
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 3/207 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ F +N + + M F P FT VL ACA LG R H + K G
Sbjct: 878 MLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVG 937
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
L + V +L++LY CG + DA ++F+++ + VVSWT++I G G +EA+ +F
Sbjct: 938 LVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELF 997
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ L P ++V VL AC+ G + ++ + G + +VDL +
Sbjct: 998 SLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGR 1057
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMI 204
G +E+A MP E + V W +++
Sbjct: 1058 AGRVEEAYDYIITMPLEPNAVVWRTLL 1084
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/554 (40%), Positives = 340/554 (61%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+ CAR H I++ L+ D + L+N Y CG++ A +VFD + +++
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+VSW +I Y EA+++F + + G K F+I VL+AC D K +H
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ N++V T+L+DLYAKCG ++ A +VF+ M +K V+WSSM+ GY N +E
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL ++ QR +L+ +T+ V+ AC++L AL G + + ++ F SN + ++ +D
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 298
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MYAKCG + ++ +F E+++K+ +WN ++SG + + K +F ++++ G+ PN T
Sbjct: 299 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 358
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
F LL C H GLV+EGR+FF M + L+P + HY CMVD+LGR+G L EA+ELIKS+
Sbjct: 359 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 418
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
P +P A +WG+LLA CR++K +LAE +L LEP N+GN+VLLSNIY+A+ +W + A
Sbjct: 419 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 478
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
K R ++ D ++K+RG SW+++ VH F VG++ HP +I S LD L K + G+ P
Sbjct: 479 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 538
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
+ +H L D+E +K+ L HSEKLAL FGL+ +RI KNLR+C DCHE +K S
Sbjct: 539 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 598
Query: 576 KITGREIIVRDNNR 589
T R IIVRD NR
Sbjct: 599 MATRRFIIVRDVNR 612
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 178/309 (57%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + N A++ + MRNEGF + FT VL AC D + H L VK
Sbjct: 125 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 184
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D + +V T+LL+LY CG + DA++VF+ + DK+ V+W+++++GY+ N EEA+ ++R
Sbjct: 185 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 244
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R L+ + F++ V+ AC+ L L K +H + ++G G NVFVA+S VD+YAKCG
Sbjct: 245 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 304
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ ++ +F ++ EK++ W+++I G+A + PKE + +F MQ++ + P T +LS
Sbjct: 305 SLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 364
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
C G +E G M LS N V + ++D+ + G +++A ++ + + D
Sbjct: 365 VCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTA 424
Query: 299 VVWNAVVSG 307
+W ++++
Sbjct: 425 SIWGSLLAS 433
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/524 (42%), Positives = 313/524 (59%), Gaps = 35/524 (6%)
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+ + R+ GL D+F++ VL +C L + + +HG G + +V SL+D+
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 176 YAKCGNMEKARRVFDQMPEKD-------------------------------IVSWSSMI 204
Y KCG + AR++FD+M +D IVSW++MI
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 205 QGYASNGFPKEALDMFYNMQREN--LKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
GY NGF ++AL +F M ++ +KP + T+V VL ACA ALE G F
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQA--CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
N + T L MYAKC + +A C K+ + WN +++ + +G A +
Sbjct: 272 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 331
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F + + G+QP+ TF+GLL GC+H+GL+D G FN M + S+ P +EHY C+VDLLG
Sbjct: 332 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLG 391
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
R+G+L EA ELI MPM+ VWGALLA CR H+ ++AE +L LEP NSGNYVL
Sbjct: 392 RAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVL 451
Query: 441 LSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSK 500
LSN+Y+ + W + K+R+++ +G++K GCSW+E++G H F+ D SHP +++IY
Sbjct: 452 LSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKF 511
Query: 501 LDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKN 560
L+ L K+K AG++P T VL DI EEEK+Y L HSEKLA+AFGL+ T P V+R+ KN
Sbjct: 512 LEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKN 571
Query: 561 LRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LR+CGDCH A K ISKI REIIVRD NRFHCF +GSCSC D+W
Sbjct: 572 LRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 177/342 (51%), Gaps = 41/342 (11%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
+E Y M G L NFT PFVLK+CA +G H ++ GL+ D +V SL+++
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 75 YVHCGYLADALKVFDD-------------------------------IPDKNVVSWTAII 103
YV CG + DA K+FD + +N+VSWTA+I
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 104 SGYINEGNLEEAINMFRRLLHRG--LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG 161
SGY G E+A+ +F +L G +KP+ +IV VL AC Q L + IH + N G
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271
Query: 162 KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE--KDIVSWSSMIQGYASNGFPKEALDM 219
N V T+L +YAKC ++ +AR FD + + K++++W++MI YAS+G EA+ +
Sbjct: 272 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 331
Query: 220 FYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS-NPVLG--TTLIDM 276
F NM R ++P+ T +G+LS C+ G ++ G+ + F + S P + ++D+
Sbjct: 332 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGL--NHFNDMGTIHSVEPRVEHYACVVDL 389
Query: 277 YAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
+ GR+ +A ++ +M VW A+++ + +++A
Sbjct: 390 LGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIA 431
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 12/219 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G+ N + A+ ++ M +G P T VL ACA+ + G R H
Sbjct: 210 MISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANG 269
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAI 116
GL + V+T+L +Y C L +A FD I KN+++W +I+ Y + G EA+
Sbjct: 270 IGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAV 329
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS----L 172
++F +L G++PD+ + + +L+ C+ G + + N+ G +V +
Sbjct: 330 SIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGL---NHFNDMGTIHSVEPRVEHYACV 386
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVS-WSSMIQGYASN 210
VDL + G + +A+ + QMP + S W +++ S+
Sbjct: 387 VDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSH 425
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/450 (48%), Positives = 301/450 (66%)
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
A +L D+ + +H G VFV +LV +YA CG+ E A ++F+ M E+++V+
Sbjct: 4 AIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVT 63
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W+S+I GYA NG P EAL +F M ++P+ +TMV +LSACA LGAL LG A +M
Sbjct: 64 WNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMV 123
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
+ N G L+D+YAKCG + QA KVF EM++K V W +++ GL++NG+ K A
Sbjct: 124 KVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALE 183
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F +LE+ G+ P+ TFVG+L C+H G+VDEG +F M + + P IEHYGCMVDLL
Sbjct: 184 LFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLL 243
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
GR+G + +AHE I++MPM+PNA+VW LL C +H L E QL+ LEP +SG+YV
Sbjct: 244 GRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYV 303
Query: 440 LLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYS 499
LLSN+Y++ +W+D K+R M +G++K G S VE+ +HEF++GD SHP +E+IY
Sbjct: 304 LLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYV 363
Query: 500 KLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAK 559
KL E+ LK G+VP +VL DIEEEEK+ L+ HSEK+A+AF LI TA IR+ K
Sbjct: 364 KLAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVK 423
Query: 560 NLRVCGDCHEAIKLISKITGREIIVRDNNR 589
NLRVC DCH AIKLISK+ REI+VRD +R
Sbjct: 424 NLRVCADCHLAIKLISKVFDREIVVRDRSR 453
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 178/294 (60%), Gaps = 7/294 (2%)
Query: 38 KACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV 97
+A A+ D + G + HS+ ++ G + FV+ +L+++Y CG+ A K+F+ + ++N+V
Sbjct: 3 RAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLV 62
Query: 98 SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYV 157
+W ++I+GY G EA+ +FR + RG++PD F++V +L+AC +LG L+ + H Y+
Sbjct: 63 TWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM 122
Query: 158 NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G N+ +L+DLYAKCG++ +A +VFD+M EK +VSW+S+I G A NGF KEAL
Sbjct: 123 VKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEAL 182
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLID 275
++F ++R+ L P T VGVL AC+ G ++ G M + E+ P + ++D
Sbjct: 183 ELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRM-KEEYGIVPKIEHYGCMVD 241
Query: 276 MYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYV---KVAFGVFGQLE 325
+ + G + QA + + M + VVW ++ +++G++ +VA QLE
Sbjct: 242 LLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLE 295
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ N A+ + M G P FT +L ACA LG R+H +VK G
Sbjct: 67 VINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVG 126
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + +LL+LY CG + A KVFD++ +K+VVSWT++I G G +EA+ +F+
Sbjct: 127 LDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFK 186
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
L +GL P + V VL AC+ G + + E G + +VDL +
Sbjct: 187 ELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRA 246
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G +++A MP + + V W +++
Sbjct: 247 GLVKQAHEFIQNMPMQPNAVVWRTLL 272
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/408 (50%), Positives = 284/408 (69%), Gaps = 1/408 (0%)
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+L+ YA+ G + AR +FD+MP ++ VSWS+M+ GY G +EAL +F MQ + ++P
Sbjct: 282 TLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRP 341
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ +VGVL+ACA LG LE G W +++ N LGT L+DMYAKCG M A +VF
Sbjct: 342 DDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVF 401
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+ MK+K+ + W ++ GL+M+G A +F Q+E+ G++P+ F+G LC CTH GLVD
Sbjct: 402 KVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVD 461
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+GR+ F+SM R + + P IEHYGCMVDLL R+G L+EA E+++ MPM+P+A++WGAL+AG
Sbjct: 462 KGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAG 521
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CR HK +LAE+V+ I LEP SG YVLL NIY+AS + A +IR +M +KG+ K
Sbjct: 522 CRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTP 581
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEEK 529
GCS VE+ GV+H+F+VGD SHP E+I SK DE+ ++++ G+VP VL DIEEEEK
Sbjct: 582 GCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEK 641
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKI 577
+ L+ HSEK+A+AF LI T+ IRI KNLRVC DCH KLISK+
Sbjct: 642 ENALSRHSEKMAIAFALINTSDDMPIRIVKNLRVCHDCHHVTKLISKV 689
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 180/355 (50%), Gaps = 38/355 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACA---------------REHD 45
+IR + A+ Y + G PT T P +LK+ A H
Sbjct: 177 LIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVHAHA 236
Query: 46 FQLG-----------VRSHS----------LIVKAGLDCDEFVKTSLLNLYVHCGYLADA 84
+LG +R H+ ++++ D +L+ Y G + DA
Sbjct: 237 VKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRVTDA 296
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+FD++P +N VSW+A+++GY+ G+ EA+ +F R+ G++PD +V VL AC QL
Sbjct: 297 RALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQL 356
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
G L KW+HGY+ VF+ T+LVD+YAKCG M+ A VF M EK++++W++MI
Sbjct: 357 GVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMI 416
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
+G A +G EAL++F M+R +KP+ +G L AC G ++ G M R +
Sbjct: 417 KGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGI 476
Query: 265 SNPVLG-TTLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
+ ++D+ A+ G + +A ++ +M K D ++W A+++G + V++A
Sbjct: 477 KPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELA 531
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/508 (42%), Positives = 317/508 (62%)
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
VSW ++I G + EG E+A++ F+++ R +K D +++ VL + + + A +H
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+ + G V +L+D+YAK G ++ A VF +M +KD+VSW+S++ GY+ NG +EA
Sbjct: 67 IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
+ +F M+ + P+ + VLSACA L ++ G + + ++ S+ + +L+ M
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
YAKCG + A + F M +D + W A++ G + NG K + + Q+ G +P+ TF
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
+GLL C+H GL+ GR +F +M +V+ + P EHY CM+DLLGRSG+L EA L+ M
Sbjct: 247 IGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMV 306
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAK 456
+ P+A+VW ALLA CR+HK+ +L E L LEP NS YV+LSN+YSA+ KW DAA+
Sbjct: 307 VAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAAR 366
Query: 457 IRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
IR +M +GI K G SW+E + V F+ D +HPL +IYSK+DE+ +K AG+VP
Sbjct: 367 IRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPD 426
Query: 517 TDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISK 576
L D ++E K+ LA HSEKLA+AFGL+T IRI KNLRVCGDCH A+K SK
Sbjct: 427 MSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSK 486
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ R II+RD+N FH F EG CSC D+W
Sbjct: 487 VYARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 171/309 (55%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V + A+ F+ MR+ +T P VL + A Q + H LI+K G
Sbjct: 12 LILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTG 71
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + V +L+++Y G L A+ VF + DK+VVSWT++++GY + G+ EEAI +F
Sbjct: 72 FEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFC 131
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ PD ++ VL+AC +L + + IH + ++G ++ V SLV +YAKCG
Sbjct: 132 KMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCG 191
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A R FD MP +D++SW+++I GYA NG K +L + M KP+Y T +G+L
Sbjct: 192 SIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLF 251
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREM-KDKDQ 298
AC+ G L G M++ + P +ID+ + G++A+A + +M D
Sbjct: 252 ACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDA 311
Query: 299 VVWNAVVSG 307
VVW A+++
Sbjct: 312 VVWKALLAA 320
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 121/238 (50%), Gaps = 2/238 (0%)
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M D VSW+S+I G GF ++AL F M+ ++K + YT+ VL++ AS+ ++
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + + F + ++ LIDMYAK G++ A VF +M DKD V W ++V+G S N
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G + A +F ++ G+ P+ +L C ++D G+Q ++ + L +
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKS-GLESSLSV 179
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+V + + G + +A+ +MP + I W AL+ G + + + +Q+IA
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTR-DVISWTALIVGYAQNGRGKHSLQFYDQMIA 236
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/535 (39%), Positives = 333/535 (62%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
++++ Y G + + +++F+++P ++V+SWT++I G G EEA+ +F+++L G++P
Sbjct: 141 AMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEP 200
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
+ VL+AC + + +HG+V + G + F++ SL+ YA C +E A ++F
Sbjct: 201 TWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIF 260
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
++ K++V W++++ Y N ++AL +F +M + P T L AC L AL+
Sbjct: 261 NETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALD 320
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + + ++ +G +L+ MY +CG + A VFR + +KD V WN+++ G +
Sbjct: 321 KGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSA 380
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G+ A F Q+ + G+ PN TF GLL C+ +G++ +GR FF +SR S
Sbjct: 381 QHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRP 440
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+HY CMVD+LGR G+LDEA EL++ MP++ N+++W ALL+ CR+H ++AE ++
Sbjct: 441 QHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILD 500
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
LEP S YVLLSNIY+++ +W D +++R M G+ K G SWV + G HEFL D
Sbjct: 501 LEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADR 560
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
SHPLSE+IY KLD L KLK G+VP L D+E+E+K+ L+ HSE+LA+AFGL++T
Sbjct: 561 SHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVST 620
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I + KNLRVCGDCH IKL+SKI GR+I+VRD+ RFH F G CSC D+W
Sbjct: 621 VEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 168/321 (52%), Gaps = 6/321 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N + A+ + M G PT TF VL ACA +F LGV+ H +VK G
Sbjct: 173 MIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLG 232
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
EF+ SL+ Y +C + A K+F++ KNVV WTA+++ Y+ ++A+ +F
Sbjct: 233 CFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFG 292
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G P+ + L AC L L K IH + G +VFV SLV +Y +CG
Sbjct: 293 DMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECG 352
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ A VF + EKDIVSW+S+I G A +GF AL F M R + P T G+LS
Sbjct: 353 NVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLS 412
Query: 241 ACASLGALELGVWASSFMERNEFLSN---PVLGTTLIDMYAKCGRMAQACKVFREMKDK- 296
AC+ G L G ++ R + SN P ++D+ +CG++ +A ++ R M K
Sbjct: 413 ACSRSGMLLKGRCFFEYISR--YKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKA 470
Query: 297 DQVVWNAVVSGLSMNGYVKVA 317
+ ++W A++S ++ ++VA
Sbjct: 471 NSMIWLALLSACRVHSNLEVA 491
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 178/360 (49%), Gaps = 10/360 (2%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T ++ Y L DALK+FD + ++VVSW ++I G ++ GNL A +F + + +
Sbjct: 47 TKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNV- 105
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
S ++ + G + A+ + ++ ++V ++V Y + G +E+ R+
Sbjct: 106 ---ISWTTMVNGYLKFGRVELAQRLFLDMHV----KDVAAWNAMVHGYFENGRVEEGVRL 158
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F++MP +D++SW+SMI G NG +EAL +F M R ++P + T VLSACA+
Sbjct: 159 FEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEF 218
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
LGV + + + + +LI YA C ++ A K+F E K+ V W A+++
Sbjct: 219 NLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAY 278
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
N + A VFG + K G PN +TF L C +D+G++ ++M+ L
Sbjct: 279 VWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKE-IHTMAIKLGLETD 337
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ +V + G ++ A + +++ E + + W +++ G H A NQ+I
Sbjct: 338 VFVGNSLVVMYTECGNVNSAVAVFRNIN-EKDIVSWNSIIVGSAQHGFGLWALIFFNQMI 396
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 121/253 (47%), Gaps = 24/253 (9%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
N+ + T ++ Y + + A ++FD+M +D+VSW+SMI+G G A +F M
Sbjct: 42 NLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMP 101
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
+N+ + TMV + G +EL F++ + + + ++ Y + GR+
Sbjct: 102 EKNV-ISWTTMV---NGYLKFGRVELA--QRLFLDMH--VKDVAAWNAMVHGYFENGRVE 153
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
+ ++F EM +D + W +++ GL +NG + A VF ++ + G++P +TF +L C
Sbjct: 154 EGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACA 213
Query: 345 HAGLVDEGRQFFNSMSRV------FSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPM 397
+A + G Q + ++ F +I Y CM +++ AH++ +
Sbjct: 214 NAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCM--------KIEHAHKIFNE-TL 264
Query: 398 EPNAIVWGALLAG 410
N + W ALL
Sbjct: 265 TKNVVKWTALLTA 277
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/605 (35%), Positives = 350/605 (57%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ + + AIE + + N G P++FTF +L A D + G + H ++K
Sbjct: 212 LMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTN 271
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +LL+ Y + + K+F ++P+ + +S+ +I+ Y G +E+ ++FR
Sbjct: 272 FVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFR 331
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L F +L+ T +L + IH G V +LVD+YAKC
Sbjct: 332 KLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCN 391
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++A+++FD + K V W++MI Y G +E +++F +M+R + + T +L
Sbjct: 392 GDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILR 451
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+L ++ LG S + R+ F+SN G+ L+D YAKCG M A K F EM +++ V
Sbjct: 452 ACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++S + NG V F Q+ + G +P+ +F+ +L C+H G V+E FNSM+
Sbjct: 512 WNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMT 571
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+++ +TP EHY MVD+L R+G+ DEA +L+ MP EP+ I+W ++L CR+HK +LA
Sbjct: 572 QIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELA 631
Query: 421 EHVLNQLIALEPW-NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ ++L +E ++ Y+ +SNIY+ + +W++ AK++ M D+G++K+ SWVE+
Sbjct: 632 KKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKH 691
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
H F D SHP +KI K++ L+ +++ G+ P T L D++E K L HSE+
Sbjct: 692 QTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSER 751
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
A+AF L+ T I + KNLR C DCH AIK+IS+I REIIVRD++RFH F +G CS
Sbjct: 752 FAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCS 811
Query: 600 CKDFW 604
C D+W
Sbjct: 812 CGDYW 816
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 212/447 (47%), Gaps = 40/447 (8%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G++ ++ + A Y MR G P T +L + V+ H+ ++K G
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170
Query: 61 LDCDEFVKTSLLNLY--VHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+ + V SL++ Y HC YLA L F + +K+ V++ ++++GY NEG EEAI +
Sbjct: 171 YEYNLMVCNSLVDAYCKTHCLYLASQL--FKHMLNKDTVTFNSLMTGYSNEGLNEEAIEL 228
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F L + G+KP F+ +L+A L D + +HG+V + NVFV +L+D Y+K
Sbjct: 229 FLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK 288
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
+++ ++F +MPE D +S++ +I YA NG KE+ D+F +Q + +
Sbjct: 289 HDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATL 348
Query: 239 LSACASLGALELG--------VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
LS S L +G ++F R E L+DMYAKC +A K+F
Sbjct: 349 LSIATSSLNLRMGRQIHCQAITVGANFESRVE--------NALVDMYAKCNGDKEAQKIF 400
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+ K V W A++S G + VF + + G+ + TF +L C + +
Sbjct: 401 DNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASIS 460
Query: 351 EGRQFFN------SMSRVFSLTPMIEHY---GCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
GRQ + MS V+S + +++ Y GCM D + G+ MP E N+
Sbjct: 461 LGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGE----------MP-ERNS 509
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ W AL++ + D + Q+I
Sbjct: 510 VSWNALISAYAQNGNVDGTLNSFQQMI 536
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 171/333 (51%), Gaps = 4/333 (1%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G L+ A ++FD + ++ VSWT +I GY+ +EA ++ + G++PD ++V +L
Sbjct: 88 GKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLL 147
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
+ +L + IH +V + G N+ V SLVD Y K + A ++F M KD V
Sbjct: 148 SGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTV 207
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+++S++ GY++ G +EA+++F + +KP +T +LSA L + G F+
Sbjct: 208 TFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFV 267
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ F+ N +G L+D Y+K ++ + K+F EM + D + +N V++ + NG K +F
Sbjct: 268 LKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESF 327
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF-NSMSRVFSLTPMIEHYGCMVD 377
+F +L+ F LL T + + GRQ +++ + +E+ +VD
Sbjct: 328 DLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN--ALVD 385
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + EA ++ ++ + + + W A+++
Sbjct: 386 MYAKCNGDKEAQKIFDNIACK-STVPWTAMISA 417
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 13/240 (5%)
Query: 163 GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
+N ++ + K G + KAR +FD M E+ VSW+ +I GY + KEA ++ +
Sbjct: 71 AKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYAD 130
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M+R ++P+Y T+V +LS L + V + + + + N ++ +L+D Y K
Sbjct: 131 MRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHC 190
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ A ++F+ M +KD V +N++++G S G + A +F +L GI+P+ TF LL
Sbjct: 191 LYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250
Query: 343 CTHAGLVDEGRQFF------NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
G+Q N + VF ++++Y + Q+DE +L MP
Sbjct: 251 AVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYY-------SKHDQVDEVGKLFXEMP 303
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/563 (39%), Positives = 334/563 (59%), Gaps = 7/563 (1%)
Query: 47 QLGVRSHSLIVKAGLD--CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIIS 104
+LG +H+ I+K LD F+ L+N+Y A + P+++VV+WTA+I+
Sbjct: 23 RLGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIA 81
Query: 105 GYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR 164
G + G A+ F + ++P+ F+ A L K +H +AG+
Sbjct: 82 GSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQIS 141
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+VFV S D+Y+K G E+AR++FD+MPE++I +W++ + G +AL F +
Sbjct: 142 DVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEAR 201
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
+E ++P + + VLSACA L LE+G + + + N +G+ L+DMY KCG +
Sbjct: 202 KEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIE 261
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG---IQPNGNTFVGLLC 341
A + F EM +++ V WNA++ G + G +A +F ++ CG + PN TFV +L
Sbjct: 262 DAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEM-TCGSHRVAPNYVTFVCVLS 320
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
C+ AG V+ G + F SM + + P EHY C+VDLLGR+G +++A++ IK MP+ P
Sbjct: 321 ACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTV 380
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMM 461
VWGALL ++ K++L + + L L+P +SGN+VLLSN+++A+ +W +A +R M
Sbjct: 381 SVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEM 440
Query: 462 GDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVL 521
D GI+K GCSW+ VH F D SH + +I + L +L +++AAG++P T L
Sbjct: 441 KDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFAL 500
Query: 522 FDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGRE 581
FD+EEEEK + HSEK+ALAFGLI+ IRI KNLR+CGDCH AIK IS I GRE
Sbjct: 501 FDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGRE 560
Query: 582 IIVRDNNRFHCFIEGSCSCKDFW 604
IIVRDNN FH F + CSC+D+W
Sbjct: 561 IIVRDNNLFHRFRDNQCSCRDYW 583
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 171/317 (53%), Gaps = 6/317 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G V N F A+ +++MR + P +FTFP KA +G + H+L VKAG
Sbjct: 79 LIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAG 138
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV S ++Y G +A K+FD++P++N+ +W A +S + EG ++A+ F
Sbjct: 139 QISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFI 198
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
G++P F + VL+AC L L K +H +A N+FV ++LVD+Y KCG
Sbjct: 199 EARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCG 258
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ--RENLKPEYYTMVGV 238
++E A R FD+MPE+++V+W++MI GYA G A+ +F M + P Y T V V
Sbjct: 259 SIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCV 318
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK 296
LSAC+ G++ +G+ M R + P ++D+ + G + QA + ++M +
Sbjct: 319 LSACSRAGSVNVGMEIFESM-RGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIR 377
Query: 297 DQV-VWNAVVSGLSMNG 312
V VW A++ M G
Sbjct: 378 PTVSVWGALLGASKMFG 394
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/605 (38%), Positives = 350/605 (57%), Gaps = 17/605 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++RG+V + AI + M + +L A V +
Sbjct: 118 LLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGR--------VNEARRLFDEM 169
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D T++L+ Y G + +A +FD++P +NVVSWTA+ISGY G +N+ R
Sbjct: 170 PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGE----VNLAR 225
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L + + S +L Q G + A + + E V +++ + + G
Sbjct: 226 KLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE----HPVAACNAMMVGFGQRG 281
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+ VF++M E+D +WS+MI+ Y N F EAL F M ++P Y +++ +L+
Sbjct: 282 MVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILT 341
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CA+L L+ G + M R F + + LI MY KCG + +A +VF + KD V+
Sbjct: 342 VCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVM 401
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++++G + +G + A G+F + G+ P+G T++G L C++ G V EGR+ FNSM+
Sbjct: 402 WNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMT 461
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
S+ P EHY CMVDLLGRSG ++EA +LIK+MP+EP+A++WGAL+ CR+H+ ++A
Sbjct: 462 VNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L+ LEP N+G YVLLS+IY++ +W DA+K+R + + + K GCSW+E D
Sbjct: 522 EFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKR 581
Query: 481 VHEFLVGDN-SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F GD +HP I L++L L +G+ VL DI+EE+K + L HSE+
Sbjct: 582 VHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSER 641
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
A+A+GL+ IR+ KNLRVCGDCH AIKLI+KIT REII+RD NRFH F +G CS
Sbjct: 642 QAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCS 701
Query: 600 CKDFW 604
C+D+W
Sbjct: 702 CRDYW 706
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 164/396 (41%), Gaps = 72/396 (18%)
Query: 78 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
G + A F+ +P + S+ A+++GY + A+ +FRR+ R L + I +
Sbjct: 30 AGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGL 89
Query: 138 LTACTQLGDLSTA--------------KWIHGYVN-----------EAGKGRNVFVATSL 172
L D + A + GYV + RN T L
Sbjct: 90 SLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVL 149
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ G + +ARR+FD+MP++D+V+W++M+ GY G EA +F M + N+
Sbjct: 150 LGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNV---- 205
Query: 233 YTMVGVLSACASLGALELGVWASSFM-ERNE-------------------------FLSN 266
+ ++S A G + L M ERNE +
Sbjct: 206 VSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEH 265
Query: 267 PVLG-TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
PV ++ + + G + A VF +M ++D W+A++ N ++ A F ++
Sbjct: 266 PVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREML 325
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR------VFSLTPMIEHYGCMVDLL 379
G++PN + + +L C ++D GR+ +M R VF+++ +I Y
Sbjct: 326 WRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMY------- 378
Query: 380 GRSGQLDEAHELIKSMPMEPNAIV-WGALLAGCRLH 414
+ G LD+A + + EP IV W +++ G H
Sbjct: 379 IKCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQH 412
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 36/244 (14%)
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ GN+E AR F+ MP + S+++++ GY N P AL +F M +L Y ++
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA-SYNALI 86
Query: 237 GVLS--------ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
LS A A+L ++ SF T+L+ Y + G +A A +
Sbjct: 87 SGLSLRRQTLPDAAAALASIPFPPSVVSF-------------TSLLRGYVRHGLLADAIR 133
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+F++M +++ V + ++ GL G V A +F ++ + + +L G AG
Sbjct: 134 LFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVV----AWTAMLSGYCQAGR 189
Query: 349 VDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
+ E R F+ M + V S T MI Y ++G+++ A +L + MP E N + W A
Sbjct: 190 ITEARALFDEMPKRNVVSWTAMISGY-------AQNGEVNLARKLFEVMP-ERNEVSWTA 241
Query: 407 LLAG 410
+L G
Sbjct: 242 MLVG 245
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/531 (42%), Positives = 317/531 (59%), Gaps = 39/531 (7%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y G + A FD+ P ++V +++ Y++ + EA +F + R L
Sbjct: 1 MYAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDL------ 54
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+S IHGY A G + AR +FD
Sbjct: 55 -------------VSWNTMIHGY--------------------AMRGEVGLAREIFDGTE 81
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
++D SWSSMI YA + KEAL+++ M ++ P+ T+V V+SAC+ LGAL +G
Sbjct: 82 DRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAE 141
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
F+E N + LGT LIDMYAKCG + A +VF M +KD W++++ GL+ +G
Sbjct: 142 VHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGL 201
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
+ +F ++ G++PNG TFVG+L CTH GLV EG+++F SM+ V + P +EHYG
Sbjct: 202 GHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYG 261
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
CMVDLLGRSG ++EA +LI+SM EP+ I+W ALL CR+HK ++AE + +L L+P
Sbjct: 262 CMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPL 321
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPL 493
G+YVLLSNIY+ ++ W A++R + IQ+I G S +E D +HEF+ GD HP
Sbjct: 322 GDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPR 381
Query: 494 SEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKD 553
S++IY L+E+ +LK AG+ P T VL DI+E+ K+ LA HSEKLA+AF L+TT +
Sbjct: 382 SKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPARS 441
Query: 554 VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI KNLR C DCH A+KLIS + R++IVRD NRFH F EG CSCKD+W
Sbjct: 442 TIRITKNLRACEDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 492
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 153/275 (55%), Gaps = 8/275 (2%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
++++ Y G + A ++FD D++ SW+++IS Y +EA+ ++R + + P
Sbjct: 59 TMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIP 118
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
D ++V V++AC+ LG L+ +H +V ++ + T+L+D+YAKCG++E A+RVF
Sbjct: 119 DCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVF 178
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D+MPEKD+ +WSSMI G A++G E+L +F M E +KP T VGVL AC +G +
Sbjct: 179 DRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVS 238
Query: 250 LGVWASSFMERNEFLS-NPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
G F NE P + ++D+ + G + +A ++ R M + D ++W A++
Sbjct: 239 EG--KKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALL 296
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
++ V++A +L + P G+ LL
Sbjct: 297 GACRIHKNVEIAEEAMAKLRV--LDPLGDGHYVLL 329
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 109/206 (52%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + + A+E + M +P T V+ AC+ +G H +
Sbjct: 91 MISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNR 150
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ D + T+L+++Y CG + A +VFD +P+K+V +W+++I G N G E++++F
Sbjct: 151 IELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFS 210
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAKC 179
+++ G+KP+ + V VL ACT +G +S K +NE G V +VDL +
Sbjct: 211 KMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRS 270
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G++E+AR++ M E D + W +++
Sbjct: 271 GHVEEARQLIRSMTFEPDTIIWRALL 296
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/586 (38%), Positives = 344/586 (58%), Gaps = 2/586 (0%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
MR G PT F +A A G + H + V+ G D + FV ++L ++Y CG
Sbjct: 113 MRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGL 172
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL-KPDSFSIVRVLT 139
L++A +VFD +P K+ V+WTA+I GY G+LE A+ FR + GL D VL+
Sbjct: 173 LSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLS 232
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK-DIV 198
A L D +K IH V +AG V V +L+D+YAK ++E A RV P ++V
Sbjct: 233 ASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVV 292
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
S +SMI GY +EAL ++ ++R+ ++P +T ++ CA LE G + +
Sbjct: 293 SGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQV 352
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ + + + +G+TL+DMY KCG ++ + ++F E++ + + WNAV++ + +G+ + A
Sbjct: 353 IKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAI 412
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
F ++ GI+PN FV LL C+HAGLVDEG ++F SM + P EHY C++D
Sbjct: 413 QAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDT 472
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNY 438
GR+G+LDEA++ I MP++PNA W +LL CR+ +L E L+ LEP N+G +
Sbjct: 473 YGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIH 532
Query: 439 VLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIY 498
V LS IY++ +W D +R +M D I+K+ G SWV+ + H F D SHP + IY
Sbjct: 533 VSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIY 592
Query: 499 SKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIA 558
KL+EL T++K G++P T + ++E+ K+ L HSE++A+AF LI+ I +
Sbjct: 593 EKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVK 652
Query: 559 KNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLR+C DCH A K I K+ R+IIVRDN+RFH F+ G CSC D+W
Sbjct: 653 KNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 194/392 (49%), Gaps = 23/392 (5%)
Query: 29 TNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC-DEFVKTSLLNLYVHCGYLADALKV 87
T +L++C R D + G H+ +V +G F+ L+ +Y HC LA AL++
Sbjct: 19 TTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRL 78
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLKPDSFSIVRVLTACTQLGD 146
F +P +N VSWT ++SG +++ + + R G+ P F++ A LG
Sbjct: 79 FAAMPRRNAVSWTTLVSG-LSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGA 137
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
+H G +FVA++L D+Y+KCG + +A RVFDQMP+KD V+W++MI G
Sbjct: 138 PLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDG 197
Query: 207 YASNGFPKEALDMFYNMQRENL-KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
YA NG + A+ F +M+RE L + + VLSA L L + + F
Sbjct: 198 YAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFEL 257
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM-NGYVKV-----AFG 319
+ LIDMYAK + A +V + D WN VVSG SM +GY++ A
Sbjct: 258 EVAVRNALIDMYAKSMDVESASRVLK----IDPGGWN-VVSGTSMIDGYIETDCVEEALV 312
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY---GCMV 376
++ +L + G++PN TF ++ GC L+++G Q + + T +I +V
Sbjct: 313 IYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIK----TDLIRDSFVGSTLV 368
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
D+ G+ G + + +L + + I W A++
Sbjct: 369 DMYGKCGLISLSMQLFNEIEYRTD-IAWNAVI 399
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/613 (37%), Positives = 352/613 (57%), Gaps = 9/613 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ V + F A++ M G P TF L AC+R +G H+ ++K
Sbjct: 242 MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD 301
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAIN 117
L + FV ++L+++Y + A +VFD +PD K + W A+I GY G EEA+
Sbjct: 302 ELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALR 361
Query: 118 MFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F R+ G P ++ VL AC + + + +HGYV + G N FV +L+D+Y
Sbjct: 362 LFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMY 421
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR---ENLKPEYY 233
A+ G + ARR+F + D+VSW+++I G G +A + MQ+ + P
Sbjct: 422 ARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAI 481
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T++ +L CA L A G + R+ ++ +G+ L+DMYAKCG +A + VF +
Sbjct: 482 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 541
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEG 352
++ + WN ++ M+G A +F ++ G +PN TF+ L C+H+G+VD G
Sbjct: 542 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 601
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM-EPNAIVWGALLAGC 411
Q F++M R + P + C+VD+LGR+G+LDEA+ ++ SM E W +L C
Sbjct: 602 LQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGAC 661
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
RLH+ L E +L+ LEP + +YVLL NIYSA+ +W AA++RS M +G+ K G
Sbjct: 662 RLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPG 721
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
CSW+EVDG +H F+ G+++HP SE++++ ++ L ++ A G+ P T VL D+++ +K
Sbjct: 722 CSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAA 781
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L CHSEKLA+AFGL+ AP IR+AKNLRVC DCHEA K +SK+ GREI++RD RFH
Sbjct: 782 VLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFH 841
Query: 592 CFIEGSCSCKDFW 604
F G CSC D+W
Sbjct: 842 HFRNGQCSCGDYW 854
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 216/454 (47%), Gaps = 26/454 (5%)
Query: 29 TNFTFPFVLKAC----AREHDFQLGVRSHSLIVKAGL--DCDEFVKTSLLNLYVHCGYLA 82
T+FT VL+A A +LG +H+ +K GL F +LL++Y G +A
Sbjct: 161 TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVA 220
Query: 83 DALKVFDD-IPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
DA ++F P + +VV+W ++S + G +EA+ ++ G++PD + L A
Sbjct: 221 DAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPA 280
Query: 141 CTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAKCGNMEKARRVFDQMPE--KDI 197
C++L L + +H YV + + N FVA++LVD+YA + KAR+VFD +P+ K +
Sbjct: 281 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL 340
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASS 256
W++MI GYA G +EAL +F M+ E P TM VL ACA A
Sbjct: 341 GMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHG 400
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
++ + N + L+DMYA+ G+ A ++F + D V WN +++G + G+V
Sbjct: 401 YVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD 460
Query: 317 AFGV---FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
AF + QLE+ G+ PN T + LL GC G++ R +L +
Sbjct: 461 AFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR-HALDTDVAVGS 519
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
+VD+ + G L + + +P N I W L+ +H A + +++ A
Sbjct: 520 ALVDMYAKCGCLALSRAVFDRLPRR-NTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 578
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
++ + + SH S M D+G+Q
Sbjct: 579 RPNEVTFMAALAACSH---------SGMVDRGLQ 603
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 198/428 (46%), Gaps = 42/428 (9%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGL--DCDEFVKTSLLNLYVHCGYLADALKVFD 89
P +K+ A D + H+ ++ GL V +LL Y CG LA AL+VF
Sbjct: 59 ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 118
Query: 90 DIPDK--NVVSWTAIISGYINEGNLEEAINMFRRLLHR----------GLKPDSFSIVRV 137
I D + VS+ ++IS A+ +FRR H G SF++V V
Sbjct: 119 SISDSAHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSV 168
Query: 138 LTACTQLGDLSTA----KWIHGYVNEAG--KGRNVFVATSLVDLYAKCGNMEKARRVF-D 190
L A + L + A + H + + G G F +L+ +YA+ G + A+R+F
Sbjct: 169 LRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAG 228
Query: 191 QMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
P + D+V+W++M+ +G EA+ Y+M ++P+ T L AC+ L L+
Sbjct: 229 ATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLD 288
Query: 250 LGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD--KDQVVWNAVVS 306
+G ++ ++ +E +N + + L+DMYA ++ +A +VF + D K +WNA++
Sbjct: 289 VGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMIC 348
Query: 307 GLSMNGYVKVAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS--MSRVF 363
G + G + A +F ++E + G P T +L C + G++ + + R
Sbjct: 349 GYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF-AGKEAVHGYVVKRGM 407
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ +++ ++D+ R G+ D A + + + P+ + W L+ GC + A +
Sbjct: 408 AGNRFVQN--ALMDMYARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHVADAFQL 464
Query: 424 LNQLIALE 431
++ LE
Sbjct: 465 AREMQQLE 472
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/605 (35%), Positives = 350/605 (57%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ + + AIE + + N G P++FTF +L A D + G + H ++K
Sbjct: 212 LMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTN 271
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +LL+ Y + + K+F ++P+ + +S+ +I+ Y G +E+ ++FR
Sbjct: 272 FVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFR 331
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L F +L+ T +L + IH G V +LVD+YAKC
Sbjct: 332 KLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCN 391
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++A+++FD + K V W++MI Y G +E +++F +M+R + + T +L
Sbjct: 392 GDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILR 451
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+L ++ LG S + R+ F+SN G+ L+D YAKCG M A K F EM +++ V
Sbjct: 452 ACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++S + NG V F Q+ + G +P+ +F+ +L C+H G V+E FNSM+
Sbjct: 512 WNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMT 571
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+++ +TP EHY MVD+L R+G+ DEA +L+ MP EP+ I+W ++L CR+HK +LA
Sbjct: 572 QIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELA 631
Query: 421 EHVLNQLIALEPW-NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ ++L +E ++ Y+ +SNIY+ + +W++ AK++ M D+G++K+ SWVE+
Sbjct: 632 KKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKH 691
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
H F D SHP +KI K++ L+ +++ G+ P T L D++E K L HSE+
Sbjct: 692 QTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSER 751
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
A+AF L+ T I + KNLR C DCH AIK+IS+I REIIVRD++RFH F +G CS
Sbjct: 752 FAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCS 811
Query: 600 CKDFW 604
C D+W
Sbjct: 812 CGDYW 816
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 212/447 (47%), Gaps = 40/447 (8%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G++ ++ + A Y MR G P T +L + V+ H+ ++K G
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170
Query: 61 LDCDEFVKTSLLNLY--VHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+ + V SL++ Y HC YLA L F + +K+ V++ ++++GY NEG EEAI +
Sbjct: 171 YEYNLMVCNSLVDAYCKTHCLYLASQL--FKHMLNKDTVTFNSLMTGYSNEGLNEEAIEL 228
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F L + G+KP F+ +L+A L D + +HG+V + NVFV +L+D Y+K
Sbjct: 229 FLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK 288
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
+++ ++F +MPE D +S++ +I YA NG KE+ D+F +Q + +
Sbjct: 289 HDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATL 348
Query: 239 LSACASLGALELG--------VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
LS S L +G ++F R E L+DMYAKC +A K+F
Sbjct: 349 LSIATSSLNLRMGRQIHCQAITVGANFESRVE--------NALVDMYAKCNGDKEAQKIF 400
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+ K V W A++S G + VF + + G+ + TF +L C + +
Sbjct: 401 DNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASIS 460
Query: 351 EGRQFFN------SMSRVFSLTPMIEHY---GCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
GRQ + MS V+S + +++ Y GCM D + G+ MP E N+
Sbjct: 461 LGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGE----------MP-ERNS 509
Query: 402 IVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ W AL++ + D + Q+I
Sbjct: 510 VSWNALISAYAQNGNVDGTLNSFQQMI 536
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 171/333 (51%), Gaps = 4/333 (1%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G L+ A ++FD + ++ VSWT +I GY+ +EA ++ + G++PD ++V +L
Sbjct: 88 GKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLL 147
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
+ +L + IH +V + G N+ V SLVD Y K + A ++F M KD V
Sbjct: 148 SGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTV 207
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+++S++ GY++ G +EA+++F + +KP +T +LSA L + G F+
Sbjct: 208 TFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFV 267
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ F+ N +G L+D Y+K ++ + K+F EM + D + +N V++ + NG K +F
Sbjct: 268 LKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESF 327
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF-NSMSRVFSLTPMIEHYGCMVD 377
+F +L+ F LL T + + GRQ +++ + +E+ +VD
Sbjct: 328 DLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN--ALVD 385
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + EA ++ ++ + + + W A+++
Sbjct: 386 MYAKCNGDKEAQKIFDNIACK-STVPWTAMISA 417
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 13/240 (5%)
Query: 163 GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
+N ++ + K G + KAR +FD M E+ VSW+ +I GY + KEA ++ +
Sbjct: 71 AKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYAD 130
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M+R ++P+Y T+V +LS L + V + + + + N ++ +L+D Y K
Sbjct: 131 MRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHC 190
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ A ++F+ M +KD V +N++++G S G + A +F +L GI+P+ TF LL
Sbjct: 191 LYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250
Query: 343 CTHAGLVDEGRQFF------NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
G+Q N + VF ++++Y + Q+DE +L MP
Sbjct: 251 AVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYY-------SKHDQVDEVGKLFYEMP 303
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/605 (37%), Positives = 350/605 (57%), Gaps = 17/605 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++RG+V + AI + M + +L A V +
Sbjct: 118 LLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGR--------VNEARRLFDEM 169
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D T++L+ Y G + +A +FD++P +NVVSWTA+ISGY G +N+ R
Sbjct: 170 PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGE----VNLAR 225
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L + + S +L Q G + A + + E V +++ + + G
Sbjct: 226 KLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE----HPVAACNAMMVGFGQRG 281
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+ VF++M E+D +WS+MI+ Y N F EAL F M ++P Y +++ +L+
Sbjct: 282 MVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILT 341
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CA+L L+ G + M R F + + LI MY KCG + +A +VF + KD V+
Sbjct: 342 VCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVM 401
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN++++G + +G + A G+F + G+ P+G T++G L C++ G V EGR+ FNSM+
Sbjct: 402 WNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMT 461
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
S+ P EHY CMVDLLGRSG ++EA +LIK+MP+EP+A++WGAL+ CR+H+ ++A
Sbjct: 462 VNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L+ LEP N+G YVLLS+IY++ +W DA+K+R + + + K GCSW+E D
Sbjct: 522 EVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKR 581
Query: 481 VHEFLVGDN-SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F GD +HP I L++L L +G+ VL DI+EE+K + L HSE+
Sbjct: 582 VHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSER 641
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
A+A+GL+ IR+ KNLRVCGDCH AIKLI+KIT REI++RD NRFH F +G CS
Sbjct: 642 QAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCS 701
Query: 600 CKDFW 604
C+D+W
Sbjct: 702 CRDYW 706
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 165/396 (41%), Gaps = 72/396 (18%)
Query: 78 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
G + A F+ +P + S+ A+++GY + A+ +FRR+ R L + I +
Sbjct: 30 AGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGL 89
Query: 138 LTACTQLGDLSTA--------------KWIHGYVN-----------EAGKGRNVFVATSL 172
L D + A + GYV + RN T L
Sbjct: 90 SLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVL 149
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ G + +ARR+FD+MP++D+V+W++M+ GY G EA +F M + N+
Sbjct: 150 LGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNV---- 205
Query: 233 YTMVGVLSACASLGALELGVWASSFM-ERNE-------------------------FLSN 266
+ ++S A G + L M ERNE +
Sbjct: 206 VSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEH 265
Query: 267 PVLG-TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
PV ++ + + G + A VF +M+++D W+A++ N ++ A F ++
Sbjct: 266 PVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREML 325
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR------VFSLTPMIEHYGCMVDLL 379
G++PN + + +L C ++D GR+ +M R VF+++ +I Y
Sbjct: 326 WRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMY------- 378
Query: 380 GRSGQLDEAHELIKSMPMEPNAIV-WGALLAGCRLH 414
+ G LD+A + + EP IV W +++ G H
Sbjct: 379 IKCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQH 412
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 36/244 (14%)
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
A+ GN+E AR F+ MP + S+++++ GY N P AL +F M +L Y ++
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA-SYNALI 86
Query: 237 GVLS--------ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
LS A A+L ++ SF T+L+ Y + G +A A +
Sbjct: 87 SGLSLRRQTLPDAAAALASIPFPPSVVSF-------------TSLLRGYVRHGLLADAIR 133
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+F++M +++ V + ++ GL G V A +F ++ + + +L G AG
Sbjct: 134 LFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVV----AWTAMLSGYCQAGR 189
Query: 349 VDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
+ E R F+ M + V S T MI Y ++G+++ A +L + MP E N + W A
Sbjct: 190 ITEARALFDEMPKRNVVSWTAMISGY-------AQNGEVNLARKLFEVMP-ERNEVSWTA 241
Query: 407 LLAG 410
+L G
Sbjct: 242 MLVG 245
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/613 (37%), Positives = 352/613 (57%), Gaps = 9/613 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ V + F A++ M G P TF L AC+R +G H+ ++K
Sbjct: 244 MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD 303
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAIN 117
L + FV ++L+++Y + A +VFD +PD K + W A+I GY G EEA+
Sbjct: 304 ELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALR 363
Query: 118 MFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F R+ G P ++ VL AC + + + +HGYV + G N FV +L+D+Y
Sbjct: 364 LFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMY 423
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR---ENLKPEYY 233
A+ G + ARR+F + D+VSW+++I G G +A + MQ+ + P
Sbjct: 424 ARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAI 483
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T++ +L CA L A G + R+ ++ +G+ L+DMYAKCG +A + VF +
Sbjct: 484 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 543
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEG 352
++ + WN ++ M+G A +F ++ G +PN TF+ L C+H+G+VD G
Sbjct: 544 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 603
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM-EPNAIVWGALLAGC 411
Q F++M R + P + C+VD+LGR+G+LDEA+ ++ SM E W +L C
Sbjct: 604 LQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGAC 663
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
RLH+ L E +L+ LEP + +YVLL NIYSA+ +W AA++RS M +G+ K G
Sbjct: 664 RLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPG 723
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
CSW+EVDG +H F+ G+++HP SE++++ ++ L ++ A G+ P T VL D+++ +K
Sbjct: 724 CSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAA 783
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L CHSEKLA+AFGL+ AP IR+AKNLRVC DCHEA K +SK+ GREI++RD RFH
Sbjct: 784 VLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFH 843
Query: 592 CFIEGSCSCKDFW 604
F G CSC D+W
Sbjct: 844 HFRNGQCSCGDYW 856
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 216/454 (47%), Gaps = 26/454 (5%)
Query: 29 TNFTFPFVLKAC----AREHDFQLGVRSHSLIVKAGL--DCDEFVKTSLLNLYVHCGYLA 82
T+FT VL+A A +LG +H+ +K GL F +LL++Y G +A
Sbjct: 163 TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVA 222
Query: 83 DALKVFDD-IPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
DA ++F P + +VV+W ++S + G +EA+ ++ G++PD + L A
Sbjct: 223 DAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPA 282
Query: 141 CTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAKCGNMEKARRVFDQMPE--KDI 197
C++L L + +H YV + + N FVA++LVD+YA + KAR+VFD +P+ K +
Sbjct: 283 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL 342
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASS 256
W++MI GYA G +EAL +F M+ E P TM VL ACA A
Sbjct: 343 GMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHG 402
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
++ + N + L+DMYA+ G+ A ++F + D V WN +++G + G+V
Sbjct: 403 YVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD 462
Query: 317 AFGV---FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
AF + QLE+ G+ PN T + LL GC G++ R +L +
Sbjct: 463 AFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR-HALDTDVAVGS 521
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
+VD+ + G L + + +P N I W L+ +H A + +++ A
Sbjct: 522 ALVDMYAKCGCLALSRAVFDRLPRR-NTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 580
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
++ + + SH S M D+G+Q
Sbjct: 581 RPNEVTFMAALAACSH---------SGMVDRGLQ 605
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 198/428 (46%), Gaps = 42/428 (9%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGL--DCDEFVKTSLLNLYVHCGYLADALKVFD 89
P +K+ A D + H+ ++ GL V +LL Y CG LA AL+VF
Sbjct: 61 ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 120
Query: 90 DIPDK--NVVSWTAIISGYINEGNLEEAINMFRRLLHR----------GLKPDSFSIVRV 137
I D + VS+ ++IS A+ +FRR H G SF++V V
Sbjct: 121 SISDSAHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSV 170
Query: 138 LTACTQLGDLSTA----KWIHGYVNEAG--KGRNVFVATSLVDLYAKCGNMEKARRVF-D 190
L A + L + A + H + + G G F +L+ +YA+ G + A+R+F
Sbjct: 171 LRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAG 230
Query: 191 QMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
P + D+V+W++M+ +G EA+ Y+M ++P+ T L AC+ L L+
Sbjct: 231 ATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLD 290
Query: 250 LGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD--KDQVVWNAVVS 306
+G ++ ++ +E +N + + L+DMYA ++ +A +VF + D K +WNA++
Sbjct: 291 VGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMIC 350
Query: 307 GLSMNGYVKVAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS--MSRVF 363
G + G + A +F ++E + G P T +L C + G++ + + R
Sbjct: 351 GYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF-AGKEAVHGYVVKRGM 409
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ +++ ++D+ R G+ D A + + + P+ + W L+ GC + A +
Sbjct: 410 AGNRFVQN--ALMDMYARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHVADAFQL 466
Query: 424 LNQLIALE 431
++ LE
Sbjct: 467 AREMQQLE 474
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/577 (38%), Positives = 345/577 (59%), Gaps = 15/577 (2%)
Query: 36 VLKACARE-HDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV-----HCGYLADALKVFD 89
++K+C+++ H Q+ H+ I++ L + F+ L+ GY + +VF
Sbjct: 74 LIKSCSKKTHLLQI----HAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSS---QVFS 126
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
I + + +I Y + E+ ++R + RG+ P+ S V+ +C ++ L
Sbjct: 127 QIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMG 186
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
IH + G + + T+L+DLY+ C E+A +VFD++P+ D VSW+ +I
Sbjct: 187 GLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIH 246
Query: 210 NGFPKEALDMFYNMQR--ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
N ++AL MF MQ + +P+ T + +L ACA+LGALE G +++E + +
Sbjct: 247 NRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGAL 306
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L +LI MY++CGR+ +A +F+ M +++ V W+A++SG +M+GY + A F Q+++
Sbjct: 307 NLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQL 366
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G+ P+ T G+L C+H GLVD+G FF+ MS+VF + P I HYGCMVDLLGR+G LD+
Sbjct: 367 GVSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQ 426
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A++LI SM ++P++ +W LL CR+H+ L E V+ LI L+ +G+YVLL NIYS+
Sbjct: 427 AYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSS 486
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
W+ +R M +KGIQ GCS +E+ G VHEF+V D HP +++IY LDE+ +
Sbjct: 487 VGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQ 546
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
LK AG+V L ++ EEK L+ HSEKLA+AFG++ T P IR+AKNLR+C DC
Sbjct: 547 LKIAGYVAELSSELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 606
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H K++S RE+++RD RFH F EG CSC +W
Sbjct: 607 HNFAKVLSGAYNREVVIRDRTRFHHFREGQCSCNGYW 643
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 182/345 (52%), Gaps = 7/345 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR + + + Y MR G P + FV+K+C R G++ H+ I++ G
Sbjct: 139 MIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARILRDG 198
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + T+L++LY C +A KVFD+IP + VSW +IS I+ +A+ MF
Sbjct: 199 HQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFD 258
Query: 121 RLLHR--GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ G +PD + + +L AC LG L + +H Y+ E G + + SL+ +Y++
Sbjct: 259 IMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSR 318
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG +EKA +F +M E+++VSWS+MI G+A +G+ +EA++ F MQ+ + P+ T+ GV
Sbjct: 319 CGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGV 378
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK 296
LSAC+ G ++ G+ M + F P + ++D+ + G + QA ++ M K
Sbjct: 379 LSACSHCGLVDDGLMFFDRMSK-VFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIK 437
Query: 297 -DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
D +W ++ ++ + + V G L + Q G+ +V LL
Sbjct: 438 PDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGD-YVLLL 481
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/613 (37%), Positives = 352/613 (57%), Gaps = 9/613 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ V + F A++ M G P TF L AC+R +G H+ ++K
Sbjct: 242 MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD 301
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAIN 117
L + FV ++L+++Y + A +VFD +PD K + W A+I GY G EEA+
Sbjct: 302 ELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALR 361
Query: 118 MFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F R+ G P ++ VL AC + + + +HGYV + G N FV +L+D+Y
Sbjct: 362 LFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMY 421
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR---ENLKPEYY 233
A+ G + ARR+F + D+VSW+++I G G +A + MQ+ + P
Sbjct: 422 ARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAI 481
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T++ +L CA L A G + R+ ++ +G+ L+DMYAKCG +A + VF +
Sbjct: 482 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 541
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEG 352
++ + WN ++ M+G A +F ++ G +PN TF+ L C+H+G+VD G
Sbjct: 542 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 601
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM-EPNAIVWGALLAGC 411
Q F++M R + P + C+VD+LGR+G+LDEA+ ++ SM E W +L C
Sbjct: 602 LQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGAC 661
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
RLH+ L E +L+ LEP + +YVLL NIYSA+ +W AA++RS M +G+ K G
Sbjct: 662 RLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPG 721
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
CSW+EVDG +H F+ G+++HP SE++++ ++ L ++ A G+ P T VL D+++ +K
Sbjct: 722 CSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAA 781
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L CHSEKLA+AFGL+ AP IR+AKNLRVC DCHEA K +SK+ GREI++RD RFH
Sbjct: 782 VLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFH 841
Query: 592 CFIEGSCSCKDFW 604
F G CSC D+W
Sbjct: 842 HFRNGQCSCGDYW 854
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 216/454 (47%), Gaps = 26/454 (5%)
Query: 29 TNFTFPFVLKAC----AREHDFQLGVRSHSLIVKAGL--DCDEFVKTSLLNLYVHCGYLA 82
T+FT VL+A A +LG +H+ +K GL F +LL++Y G +A
Sbjct: 161 TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVA 220
Query: 83 DALKVFDD-IPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
DA ++F P + +VV+W ++S + G +EA+ ++ G++PD + L A
Sbjct: 221 DAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPA 280
Query: 141 CTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAKCGNMEKARRVFDQMPE--KDI 197
C++L L + +H YV + + N FVA++LVD+YA + KAR+VFD +P+ K +
Sbjct: 281 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL 340
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASS 256
W++MI GYA G +EAL +F M+ E P TM VL ACA A
Sbjct: 341 GMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHG 400
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
++ + N + L+DMYA+ G+ A ++F + D V WN +++G + G+V
Sbjct: 401 YVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD 460
Query: 317 AFGV---FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
AF + QLE+ G+ PN T + LL GC G++ R +L +
Sbjct: 461 AFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR-HALDTDVAVGS 519
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
+VD+ + G L + + +P N I W L+ +H A + +++ A
Sbjct: 520 ALVDMYAKCGCLALSRAVFDRLPRR-NTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 578
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
++ + + SH S M D+G+Q
Sbjct: 579 RPNEVTFMAALAACSH---------SGMVDRGLQ 603
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 198/428 (46%), Gaps = 42/428 (9%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGL--DCDEFVKTSLLNLYVHCGYLADALKVFD 89
P +K+ A D + H+ ++ GL V +LL Y CG LA AL+VF
Sbjct: 59 ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 118
Query: 90 DIPDK--NVVSWTAIISGYINEGNLEEAINMFRRLLHR----------GLKPDSFSIVRV 137
I D + VS+ ++IS A+ +FRR H G SF++V V
Sbjct: 119 SISDSAHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSV 168
Query: 138 LTACTQLGDLSTA----KWIHGYVNEAG--KGRNVFVATSLVDLYAKCGNMEKARRVF-D 190
L A + L + A + H + + G G F +L+ +YA+ G + A+R+F
Sbjct: 169 LRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAG 228
Query: 191 QMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
P + D+V+W++M+ +G EA+ Y+M ++P+ T L AC+ L L+
Sbjct: 229 ATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLD 288
Query: 250 LGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD--KDQVVWNAVVS 306
+G ++ ++ +E +N + + L+DMYA ++ +A +VF + D K +WNA++
Sbjct: 289 VGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMIC 348
Query: 307 GLSMNGYVKVAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS--MSRVF 363
G + G + A +F ++E + G P T +L C + G++ + + R
Sbjct: 349 GYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF-AGKEAVHGYVVKRGM 407
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ +++ ++D+ R G+ D A + + + P+ + W L+ GC + A +
Sbjct: 408 AGNRFVQN--ALMDMYARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHVADAFQL 464
Query: 424 LNQLIALE 431
++ LE
Sbjct: 465 AREMQQLE 472
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/493 (44%), Positives = 317/493 (64%), Gaps = 6/493 (1%)
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A+ + RR R PD+ + ++ AC +L L + +H + G VFV SLV
Sbjct: 103 ALELHRR---RLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVH 159
Query: 175 LYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
LY CG E A +VFD+MP +++VSW+SM+ +A+NG P E L +F+ M + P+
Sbjct: 160 LYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDG 219
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+T+V VL+ACA GAL LG ++E+ + N + LID+YAKCG + A ++F E
Sbjct: 220 FTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEE 279
Query: 293 MKDKDQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
M VV W +++ GL+ NG+ K A +F +E+ + P T VG+L C+H GLVD+
Sbjct: 280 MGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDD 339
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
G ++F+ M + ++P IEH GCMVDLLGR+G+++EA++ I +MP+EPNA+VW LL C
Sbjct: 340 GFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSC 399
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
+HKK +L + +L+ L+P +SG+YVLLSN+Y+A W D +R M ++K G
Sbjct: 400 AMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPG 459
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
S VE+ V+EF++GD SHP SE+IY L E+A +L+ G++P T +VL DIEEEEK+
Sbjct: 460 HSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKET 519
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L HSE+LA+AF L+ + P IRI KNLR+CGDCH A LISK+ REIIVRD +RFH
Sbjct: 520 ALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFH 579
Query: 592 CFIEGSCSCKDFW 604
F G+CSCKD+W
Sbjct: 580 HFQGGACSCKDYW 592
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 171/296 (57%), Gaps = 7/296 (2%)
Query: 22 RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYL 81
R LP T+P +++ACAR + G H+ K G FV+ SL++LY CG
Sbjct: 108 RRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLF 167
Query: 82 ADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 139
A KVFD++P +N+VSW ++++ + G E + +F +L PD F+IV VLT
Sbjct: 168 ESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLT 227
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-EKDIV 198
AC + G L+ + +H YV + G N V+ +L+DLYAKCG++ ARR+F++M + +V
Sbjct: 228 ACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVV 287
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
SW+S+I G A+NGF KEAL++F M+RE L P TMVGVL AC+ G ++ G M
Sbjct: 288 SWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRM 347
Query: 259 ERNEFLSNPV--LGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMN 311
+ + +S + LG ++D+ + GR+ +A M + + VVW ++ +M+
Sbjct: 348 KEDYGISPRIEHLG-CMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMH 402
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 3/207 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ F +N + + M F P FT VL ACA LG R H + K G
Sbjct: 190 MLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVG 249
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
L + V +L++LY CG + DA ++F+++ + VVSWT++I G G +EA+ +F
Sbjct: 250 LVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELF 309
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ L P ++V VL AC+ G + ++ + G + +VDL +
Sbjct: 310 SLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGR 369
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMI 204
G +E+A MP E + V W +++
Sbjct: 370 AGRVEEAYDYIITMPLEPNAVVWRTLL 396
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/586 (38%), Positives = 344/586 (58%), Gaps = 2/586 (0%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
MR G PT F +A A G + H + V+ G D + FV ++L ++Y CG
Sbjct: 32 MRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGL 91
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL-KPDSFSIVRVLT 139
L++A +VFD +P K+ V+WTA+I GY G+LE A+ FR + GL D VL+
Sbjct: 92 LSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLS 151
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK-DIV 198
A L D +K IH V +AG V V +L+D+YAK ++E A RV P ++V
Sbjct: 152 ASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVV 211
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
S +SMI GY +EAL ++ ++R+ ++P +T ++ CA LE G + +
Sbjct: 212 SGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQV 271
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ + + + +G+TL+DMY KCG ++ + ++F E++ + + WNAV++ + +G+ + A
Sbjct: 272 IKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAI 331
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
F ++ GI+PN FV LL C+HAGLVDEG ++F SM + P EHY C++D
Sbjct: 332 QAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDT 391
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNY 438
GR+G+LDEA++ I MP++PNA W +LL CR+ +L E L+ LEP N+G +
Sbjct: 392 YGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIH 451
Query: 439 VLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIY 498
V LS IY++ +W D +R +M D I+K+ G SWV+ + H F D SHP + IY
Sbjct: 452 VSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIY 511
Query: 499 SKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIA 558
KL+EL T++K G++P T + ++E+ K+ L HSE++A+AF LI+ I +
Sbjct: 512 EKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVK 571
Query: 559 KNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLR+C DCH A K I K+ R+IIVRDN+RFH F+ G CSC D+W
Sbjct: 572 KNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 617
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 162/328 (49%), Gaps = 20/328 (6%)
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
+P +N VSWT ++SG +A+ F + G+ P F++ A LG
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
+H G +FVA++L D+Y+KCG + +A RVFDQMP+KD V+W++MI GYA N
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120
Query: 211 GFPKEALDMFYNMQRENL-KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
G + A+ F +M+RE L + + VLSA L L + + F +
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM-NGYVKV-----AFGVFGQ 323
LIDMYAK + A +V + D WN VVSG SM +GY++ A ++ +
Sbjct: 181 RNALIDMYAKSMDVESASRVLK----IDPGGWN-VVSGTSMIDGYIETDCVEEALVIYVE 235
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY---GCMVDLLG 380
L + G++PN TF ++ GC L+++G Q + + T +I +VD+ G
Sbjct: 236 LRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIK----TDLIRDSFVGSTLVDMYG 291
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALL 408
+ G + + +L + + I W A++
Sbjct: 292 KCGLISLSMQLFNEIEYRTD-IAWNAVI 318
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/684 (35%), Positives = 368/684 (53%), Gaps = 82/684 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKA----------CAREH--DFQL 48
MI F + A++ + M+ GF+P FTF VL A C + H F+
Sbjct: 101 MITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKW 160
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP---------------- 92
G S ++ A + C +V + L C +A A K+FD+ P
Sbjct: 161 GALSVPSVLNALMSC--YVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGY 218
Query: 93 -----------------DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIV 135
D V+W A+ISGY++ G EEA ++ RR+ G++ D ++
Sbjct: 219 VRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYT 278
Query: 136 RVLTACTQLGDLSTAKWIHGYVNEA---GKGRNVF-VATSLVDLYAKCGNMEKARRVFDQ 191
V++A + G + + +H YV G V V +L+ LY +CG + +ARRVFD+
Sbjct: 279 SVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDK 338
Query: 192 MPEKDIVSWSS-------------------------------MIQGYASNGFPKEALDMF 220
MP KD+VSW++ MI G A NGF +E L +F
Sbjct: 339 MPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLF 398
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC 280
M+ E L+P Y G +++C+ LG+L+ G S + + S+ +G LI MY++C
Sbjct: 399 NQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRC 458
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G + A VF M D V WNA+++ L+ +G+ A ++ ++ K I P+ TF+ +L
Sbjct: 459 GLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTIL 518
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C+HAGLV EGR +F++M + +TP +HY ++DLL R+G EA + +SMP EP
Sbjct: 519 SACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPG 578
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSM 460
A +W ALLAGC +H +L ++L+ L P G Y+ LSN+Y+A +W++ A++R +
Sbjct: 579 APIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKL 638
Query: 461 MGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHV 520
M ++G++K GCSW+EV+ +VH FLV D HP +Y L++L +++ G+VP T V
Sbjct: 639 MRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFV 698
Query: 521 LFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGR 580
L D+E E+K+Y L+ HSEKLA+ +G++ IR+ KNLR+CGDCH A K ISK+ R
Sbjct: 699 LHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDR 758
Query: 581 EIIVRDNNRFHCFIEGSCSCKDFW 604
EIIVRD RFH F G CSC ++W
Sbjct: 759 EIIVRDRKRFHHFRNGECSCSNYW 782
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 148/366 (40%), Gaps = 82/366 (22%)
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
QL S A+ +H ++ +G + L+D Y K N+ AR +FD++P+ DIV+ +
Sbjct: 7 AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66
Query: 202 SMIQGYASNGFPK---------------------------------EALDMFYNMQRENL 228
+M+ Y++ G K AL +F M+R
Sbjct: 67 TMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGF 126
Query: 229 KPEYYTMVGVLSA----------CASL-------GALELGVWASSFME------------ 259
P+ +T VL A C L GAL + ++ M
Sbjct: 127 VPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVN 186
Query: 260 --------RNEFLSNP------VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
R F P TT+I Y + + A ++ M D V WNA++
Sbjct: 187 SCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMI 246
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
SG G+ + AF + ++ GIQ + T+ ++ ++AGL + GRQ + R +
Sbjct: 247 SGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTV-V 305
Query: 366 TP----MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
P ++ ++ L R G+L EA + MP++ + + W A+L+GC ++ + A
Sbjct: 306 QPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGCVNARRIEEAN 364
Query: 422 HVLNQL 427
+ ++
Sbjct: 365 SIFREM 370
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/573 (38%), Positives = 347/573 (60%), Gaps = 7/573 (1%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPD 93
++K+C H QL ++ H+ I+ D V L + L + ++FD + +
Sbjct: 33 LIKSCT--HKSQL-LQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTN 89
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
V + A++ Y + E + M+R + +G++ D S + +C +L L I
Sbjct: 90 PFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 149
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
H + G + + TS++DLY+ CG E+A ++FD++P+KD+V+W+ +I N
Sbjct: 150 HARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRT 209
Query: 214 KEALDMFYNMQRENL--KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
++AL +F MQ +P+ T + +L ACA L ALE G +++++ + + L
Sbjct: 210 RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCN 269
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
+LI MY++CGRM +A +VF +M +K+ V W+A++SGLSMNG+ + A F +++K G++P
Sbjct: 270 SLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEP 329
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+TF +L C+H GLVDEG FF+ M + F + P + HYGC+VDLLGR+G LD+A+EL
Sbjct: 330 GDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYEL 389
Query: 392 IKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKW 451
I SM + P+A +W LL CR+H +L E ++ LI L+ +G+YVLL NIYS++ W
Sbjct: 390 IMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNW 449
Query: 452 NDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAA 511
+ ++R +M +KGI C+ +E++GVVH+F V D SHP+ +KIY +LDE+ +LK A
Sbjct: 450 DKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIA 509
Query: 512 GFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAI 571
G+ L +E ++K Y L+ HSEKLA+AFG++ T P IRIA N+R C DCH
Sbjct: 510 GYEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFA 569
Query: 572 KLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K IS + R+++VRD +RFH F EG CSC DFW
Sbjct: 570 KYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 602
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 183/352 (51%), Gaps = 7/352 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+R + + + Y M +G + F +K+C + G++ H+ I G
Sbjct: 98 MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFING 157
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + TS+++LY HCG +A K+FD++P K+VV+W +IS +A+ +F
Sbjct: 158 HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 217
Query: 121 RLLHRGL--KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ +PD + + +L AC L L + IHGY+ + G + SL+ +Y++
Sbjct: 218 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 277
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG M+KA VFD+M EK++VSWS+MI G + NG +EA++ F+ MQ+ ++P +T V
Sbjct: 278 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 337
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK 296
LSAC+ G ++ G+ M R EF+ P + ++D+ + G + QA ++ M+ +
Sbjct: 338 LSACSHCGLVDEGMAFFDRM-RQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVR 396
Query: 297 -DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
D +W ++ ++G+ + + L + Q G+ +V LL + AG
Sbjct: 397 PDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGD-YVLLLNIYSSAG 447
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/530 (40%), Positives = 326/530 (61%), Gaps = 4/530 (0%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL--KPDSFSIVR 136
G L A + + + +N +I Y + +A+++F +L + +PD F+
Sbjct: 42 GDLTYAHLILNSLSTQNSFFHNTMIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFTYPF 101
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
+L +C +L K +HG + ++G + +V+ L+ +Y+ CG +A +VF +M ++D
Sbjct: 102 LLKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRD 161
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASS 256
+VSW+SMI G+ + EA+ +F M + ++P T+V VL ACA GA+ +G
Sbjct: 162 VVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQG 221
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
+E + + T LIDMYAKCG + A KVF + +KD W A++SGL+ +G +
Sbjct: 222 VIEERKIGLEANVRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEE 281
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A +F Q+E G++P+ T +L C +AG EG +FNSM + + P I+HYGCMV
Sbjct: 282 AVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMV 341
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ--LIALEPWN 434
DLL R+G LDEA E I+ MP+EP+ ++W L+ ++H D +E ++ L+ ++ +
Sbjct: 342 DLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKVHGDIDRSEQLMKDRGLLKMDSDD 401
Query: 435 SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLS 494
G+YVLL N+Y+++ KW+D AK+R +M KG+ K GCS +EVDG+VHEF GD+ H +
Sbjct: 402 CGSYVLLGNVYASAGKWHDKAKMRELMNQKGLSKPPGCSRIEVDGLVHEFAAGDSGHIEA 461
Query: 495 EKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDV 554
EKIY+KLDE+ +LKA G+ P VL +I+ +EK + L HSEKLA+AFGLI T+P
Sbjct: 462 EKIYAKLDEVEERLKAEGYHPKLSEVLLEIDNKEKAFQLRHHSEKLAVAFGLIKTSPGTE 521
Query: 555 IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IRI KNLR C DCH +KLISKI ++IIVRD RFH FI G CSCKD+W
Sbjct: 522 IRIVKNLRSCEDCHSVLKLISKIYQQDIIVRDRIRFHHFINGDCSCKDYW 571
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 180/317 (56%), Gaps = 6/317 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MIR + A+ + SM + P FT+PF+LK+CAR ++G + H LI K
Sbjct: 65 MIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLLKSCARLKQPRVGKQLHGLIYK 124
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+GL+ D +V L+++Y CG A KVF + D++VVSWT++I G++++ EAI +
Sbjct: 125 SGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRL 184
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++ G++P+ ++V VL AC G + + + G + E G V T+L+D+YAK
Sbjct: 185 FEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAK 244
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG++ AR+VFD + KD+ +W++MI G A++G +EA+ +F M+ L+P+ TM V
Sbjct: 245 CGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAV 304
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-D 295
LSAC + G G + M ++ P + ++D+ A+ G + +A + R+M +
Sbjct: 305 LSACRNAGWFSEGFAYFNSM-WCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIE 363
Query: 296 KDQVVWNAVVSGLSMNG 312
D V+W ++ ++G
Sbjct: 364 PDVVLWRTLIWASKVHG 380
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/602 (37%), Positives = 351/602 (58%), Gaps = 37/602 (6%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-N 95
L+ C E + + + H+ ++K+GL D + T L+ + + + A VF + D+ +
Sbjct: 18 LQKCPTEVELK---QIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPD 74
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
W +I G + ++ ++ R+L ++++ +L AC+ L IH
Sbjct: 75 TFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHA 134
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD------------------------- 190
++ + G G +++ SL++ YA GN + A +FD
Sbjct: 135 HITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDM 194
Query: 191 ------QMPEKD-IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
+MPEK+ +SW++MI GY G KEAL +F+ MQ N+ P+ ++ LSAC+
Sbjct: 195 ALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACS 254
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
LGALE G W S+ + + VL LIDMYAKCG M +A VF+ MK K VW A
Sbjct: 255 QLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTA 314
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
++SG + +G + A F +++ G++PN TF +L C++ GLV+EG+ FN++ R +
Sbjct: 315 LISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDY 374
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+L P IEHYGCMVDLLGR+G L+EA+ I+ MP++PNA++WG+LL C++HK +L E +
Sbjct: 375 NLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKI 434
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
LI ++ + G YV ++NI++ KW+ AA+ R +M ++G+ K+ GCS + ++G HE
Sbjct: 435 GEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHE 494
Query: 484 FLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD-IEEEEKQYFLACHSEKLAL 542
FL GD SH ++I +K + KL+ G+VP + +L D +++EEK+ + HSEKLA+
Sbjct: 495 FLAGDRSHAEIQEIRTKWRFVRRKLEENGYVPELEDMLLDLVDDEEKEAIVHQHSEKLAI 554
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
+GL+ T P IRI KNLRVC DCH+ + LISKI R+I++RD RFH F +G CSC D
Sbjct: 555 TYGLMKTKPGTTIRIMKNLRVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFKDGKCSCGD 614
Query: 603 FW 604
+W
Sbjct: 615 YW 616
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 174/351 (49%), Gaps = 34/351 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG +D ++ Y+ M +TFPF+LKAC+ FQ + H+ I K G
Sbjct: 81 MIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFG 140
Query: 61 LDCDEFVKTSLLNL-------------------------------YVHCGYLADALKVFD 89
D + SL+N YV G + AL +F
Sbjct: 141 YGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFR 200
Query: 90 DIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+P+K N +SWT +ISGY+ G +EA+ +F + + + PD+ S+ L+AC+QLG L
Sbjct: 201 KMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALE 260
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
KWIH Y N+ + + L+D+YAKCG ME+A VF M K + W+++I GYA
Sbjct: 261 QGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYA 320
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+G +EA+ F MQ +KP T VL+AC+ G +E G + +ER+ L +
Sbjct: 321 YHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTI 380
Query: 269 LGT-TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVA 317
++D+ + G + +A + ++M K + V+W +++ ++ +++
Sbjct: 381 EHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELG 431
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/587 (40%), Positives = 338/587 (57%), Gaps = 3/587 (0%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQ-LGVRSHSLIVKAG-LDCDEFVKTSLLNLYVHC 78
M G P +FTFP KA A +G + HSL ++ G L D FV + L++Y
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G L A +F ++P++NVV+W A+++ + +G E I + L G P+ S
Sbjct: 61 GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
AC LS + HG+V + G +V V S+VD Y KC KAR VFD M ++ V
Sbjct: 121 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 180
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
SW SM+ YA NG +EA + +R +P + + L+ CA L L LG +
Sbjct: 181 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 240
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
R+ +N + + L+DMY KCG + A ++F E ++ V WNA++ G + G + A
Sbjct: 241 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNAL 300
Query: 319 GVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
VF + + G PN T V ++ C+ GL +G + F +M F + P EHY C+VD
Sbjct: 301 LVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVD 360
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGN 437
LLGR+G ++A+E+I+ MPM P+ VWGALL C++H KT+L +L L+P +SGN
Sbjct: 361 LLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGN 420
Query: 438 YVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKI 497
+VLLSN+++++ +W +A IR M + GI+K GCSWV VVH F D H + +I
Sbjct: 421 HVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEI 480
Query: 498 YSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRI 557
+ L +L +++AAG++P T + L+D+EEEEK+ + HSEKLALAFGLI P IRI
Sbjct: 481 QALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRI 540
Query: 558 AKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLR+C DCH A K IS I GREIIVRDNNRFH F + CSC D+W
Sbjct: 541 MKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 158/324 (48%), Gaps = 5/324 (1%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
IE Y +R G LP + ACA LG + H +VK G + D V S+++
Sbjct: 98 IEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDF 157
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
Y C A VFD + +N VSW ++++ Y G EEA + G +P F +
Sbjct: 158 YGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMV 217
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
LT C L L + +H + N+FVA++LVD+Y KCG +E A ++F + P+
Sbjct: 218 SSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQ 277
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALELGVW 253
+++V+W++MI GYA G + AL +F +M R P Y T+V V+++C+ G + G
Sbjct: 278 RNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYE 337
Query: 254 ASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDKDQV-VWNAVVSGLSM 310
M R F P ++D+ + G QA +V + M + + VW A++ M
Sbjct: 338 LFETM-RERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKM 396
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGN 334
+G ++ +L + Q +GN
Sbjct: 397 HGKTELGRIAAEKLFELDPQDSGN 420
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 137/317 (43%), Gaps = 49/317 (15%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + N + A Y R G PT+F L CA LG H++ V++
Sbjct: 185 MVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC 244
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D + FV ++L+++Y CG + DA ++F + P +N+V+W A+I GY + G+ + A+ +F
Sbjct: 245 IDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFD 304
Query: 121 RLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAK 178
++ G P+ ++V V+T+C++ G + + E G +VDL +
Sbjct: 305 DMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGR 364
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G E+A V MP ++P +
Sbjct: 365 AGMEEQAYEVIQGMP----------------------------------MRPSISVWGAL 390
Query: 239 LSACASLGALELGVWASS--FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD- 295
L AC G ELG A+ F + N VL L +M+A GR A+A + +EMK+
Sbjct: 391 LGACKMHGKTELGRIAAEKLFELDPQDSGNHVL---LSNMFASAGRWAEATDIRKEMKNV 447
Query: 296 ---KDQ----VVWNAVV 305
KD V W VV
Sbjct: 448 GIKKDPGCSWVTWKNVV 464
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/613 (37%), Positives = 352/613 (57%), Gaps = 9/613 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ V + F A++ M G P TF L AC+R +G H+ ++K
Sbjct: 90 MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD 149
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAIN 117
L + FV ++L+++Y + A +VFD +PD K + W A+I GY G EEA+
Sbjct: 150 ELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALR 209
Query: 118 MFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+F R+ G P ++ VL AC + + + +HGYV + G N FV +L+D+Y
Sbjct: 210 LFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMY 269
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR---ENLKPEYY 233
A+ G + ARR+F + D+VSW+++I G G +A + MQ+ + P
Sbjct: 270 ARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAI 329
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T++ +L CA L A G + R+ ++ +G+ L+DMYAKCG +A + VF +
Sbjct: 330 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 389
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEG 352
++ + WN ++ M+G A +F ++ G +PN TF+ L C+H+G+VD G
Sbjct: 390 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 449
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM-EPNAIVWGALLAGC 411
Q F++M R + P + C+VD+LGR+G+LDEA+ ++ SM E W +L C
Sbjct: 450 LQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGAC 509
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
RLH+ L E +L+ LEP + +YVLL NIYSA+ +W AA++RS M +G+ K G
Sbjct: 510 RLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPG 569
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
CSW+EVDG +H F+ G+++HP SE++++ ++ L ++ A G+ P T VL D+++ +K
Sbjct: 570 CSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAA 629
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L CHSEKLA+AFGL+ AP IR+AKNLRVC DCHEA K +SK+ GREI++RD RFH
Sbjct: 630 VLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFH 689
Query: 592 CFIEGSCSCKDFW 604
F G CSC D+W
Sbjct: 690 HFRNGQCSCGDYW 702
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 216/454 (47%), Gaps = 26/454 (5%)
Query: 29 TNFTFPFVLKAC----AREHDFQLGVRSHSLIVKAGL--DCDEFVKTSLLNLYVHCGYLA 82
T+FT VL+A A +LG +H+ +K GL F +LL++Y G +A
Sbjct: 9 TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVA 68
Query: 83 DALKVFDD-IPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
DA ++F P + +VV+W ++S + G +EA+ ++ G++PD + L A
Sbjct: 69 DAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPA 128
Query: 141 CTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAKCGNMEKARRVFDQMPE--KDI 197
C++L L + +H YV + + N FVA++LVD+YA + KAR+VFD +P+ K +
Sbjct: 129 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL 188
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASS 256
W++MI GYA G +EAL +F M+ E P TM VL ACA A
Sbjct: 189 GMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHG 248
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
++ + N + L+DMYA+ G+ A ++F + D V WN +++G + G+V
Sbjct: 249 YVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD 308
Query: 317 AFGV---FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
AF + QLE+ G+ PN T + LL GC G++ R +L +
Sbjct: 309 AFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR-HALDTDVAVGS 367
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
+VD+ + G L + + +P N I W L+ +H A + +++ A
Sbjct: 368 ALVDMYAKCGCLALSRAVFDRLPRR-NTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 426
Query: 434 NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
++ + + SH S M D+G+Q
Sbjct: 427 RPNEVTFMAALAACSH---------SGMVDRGLQ 451
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/631 (36%), Positives = 347/631 (54%), Gaps = 27/631 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI V + A++ M G P TF L AC+R +G H+ ++K
Sbjct: 231 MISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDD 290
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNL-EEAI 116
L + FV ++L+++Y ++ A +VFD +P+ + + W A+I GY G + EEAI
Sbjct: 291 DLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAI 350
Query: 117 NMFRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+F R+ G P ++ VL AC + + + +HGYV + N FV +L+D+
Sbjct: 351 ELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDM 410
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR---------- 225
YA+ G M++A +F + +DIVSW+++I G G EA + MQ
Sbjct: 411 YARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETM 470
Query: 226 ----------ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
+ P T++ +L CA L A G + R+ S+ +G+ L+D
Sbjct: 471 LEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVD 530
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGN 334
MYAKCG +A A VF + ++ + WN ++ M+G A +F ++ G PN
Sbjct: 531 MYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEV 590
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
TF+ L C+H+GLVD G + F M R + P + C+VD+LGR+G+LDEA+ +I S
Sbjct: 591 TFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISS 650
Query: 395 M-PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWND 453
M P E W +L CRLH+ L +L LEP + +YVLL NIYSA+ W +
Sbjct: 651 MAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWEN 710
Query: 454 AAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGF 513
+ ++R MM +G+ K GCSW+E+DG +H F+ G+++HP S ++++ +D L +++ G+
Sbjct: 711 STEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGY 770
Query: 514 VPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKL 573
VP T VL D++E EK L HSEKLA+AFGL+ P IR+AKNLRVC DCHEA K
Sbjct: 771 VPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKF 830
Query: 574 ISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IS++ GREI++RD RFH F +G+CSC D+W
Sbjct: 831 ISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 223/477 (46%), Gaps = 47/477 (9%)
Query: 29 TNFTFPFVLKACAREHD--FQLGVRSHSLIVKAG-LDC--DEFVKTSLLNLYVHCGYLAD 83
++FT VL AC+ D +LG +H+ +K G LD + F +LL++Y G + D
Sbjct: 151 SSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDD 210
Query: 84 ALKVF--DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
A ++F ++V+W +IS + G EEA+ + ++ G++PD + L AC
Sbjct: 211 AQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPAC 270
Query: 142 TQLGDLSTAKWIHGYV-NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE--KDIV 198
++L L + +H +V + N FVA++LVD+YA + ARRVFD +PE + +
Sbjct: 271 SRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLG 330
Query: 199 SWSSMIQGYASN-GFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASS 256
W++MI GYA + G +EA+++F M+ E P TM GVL ACA
Sbjct: 331 MWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHG 390
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
++ + + SN + L+DMYA+ GRM +A +F + +D V WN +++G + G +
Sbjct: 391 YVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISE 450
Query: 317 AFGVFGQL----------------------EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
AF + ++ ++C PN T + LL GC G++
Sbjct: 451 AFQLVREMQLPSSAASGETMLEGDDTSVDGQRC--MPNNITLMTLLPGCAVLAAPARGKE 508
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
R +L + +VD+ + G L A + +P N I W L+ +H
Sbjct: 509 IHGYAVR-HALESDLAVGSALVDMYAKCGCLALARAVFDRLPRR-NVITWNVLIMAYGMH 566
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
D A + ++++A ++ + + SH S + D+G++ +G
Sbjct: 567 GLGDEALALFDRMVANGEATPNEVTFIAALAACSH---------SGLVDRGLELFQG 614
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 134/303 (44%), Gaps = 17/303 (5%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNV-FVATSLVDLYAKCGNMEKARR 187
D F++ + + L D + + IHG + A R V+ +L+ YA+CG+++ A
Sbjct: 47 DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106
Query: 188 VFDQMPE--KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+F P +D VS++S+I ALD +M ++ + +T+V VL AC+ L
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADH-EVSSFTLVSVLLACSHL 165
Query: 246 G--ALELGVWASSFMERNEFLSN-----PVLGTTLIDMYAKCGRMAQACKVFREMKD--K 296
LG A +F ++ FL P L+ MYA+ G + A ++F
Sbjct: 166 ADQGHRLGREAHAFALKHGFLDKGRERFPF--NALLSMYARLGLVDDAQRLFFSSGAGVG 223
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
D V WN ++S L G + A V + G++P+G TF L C+ L+ GR+
Sbjct: 224 DLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVH 283
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI-VWGALLAGCRLHK 415
+ + L +VD+ + Q+ A + +P + +W A++ G H
Sbjct: 284 AFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHG 343
Query: 416 KTD 418
D
Sbjct: 344 GMD 346
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/524 (41%), Positives = 326/524 (62%), Gaps = 8/524 (1%)
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
L+ A VF I + NV +W + GY N A+ +R+++ ++PD+ + +L A
Sbjct: 80 LSYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKA 139
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
++ ++ + IH G VFV SL+ +YA CG+ E A VF+ M ++D+V+
Sbjct: 140 ISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAX 199
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
S+I G+A NG P EAL +F M E ++P+ +T+V +LSA A LGALELG ++ +
Sbjct: 200 ISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK 259
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
N + +L+D+YAKC + + +++ V W +++ GL++NG+ + A +
Sbjct: 260 VGLRENSHVTNSLLDLYAKCDAIWEX--------ERNAVSWTSLIVGLAVNGFGEEALEL 311
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F ++E G+ P+ TFVG+L C+H G++DEG +F M F + P IEHYGCMVDLL
Sbjct: 312 FREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLS 371
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
R+G + +A+E I++MP++PNA+ W LL C +H L E + L+ LEP +SG+YVL
Sbjct: 372 RAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVL 431
Query: 441 LSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSK 500
LSN+Y++ +W D IR M G++K G S VE+ V+EF +G+ SHP S+ +Y+
Sbjct: 432 LSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYAL 491
Query: 501 LDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKN 560
L+++ LK G+VP T +VL DIEEEEK+ L+ HSEK A+AF + TAP IR+ KN
Sbjct: 492 LEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKXAIAFMRLNTAPGTTIRVMKN 551
Query: 561 LRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LRVC DCH AIKL++K+ REI++RD RFH F GSCSCKD+W
Sbjct: 552 LRVCADCHMAIKLMAKVYDREIVIRDRGRFHHFRGGSCSCKDYW 595
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 181/337 (53%), Gaps = 12/337 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG+ +D A+ FY M P T+PF+LKA ++ + + G HS+ ++ G
Sbjct: 101 MTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNG 160
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV+ SLL++Y CG A VF+ + D+++V+ ++I+G+ G EA+ +FR
Sbjct: 161 FESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLFR 220
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++PD F++V +L+A +LG L + +H Y+ + G N V SL+DLYAKC
Sbjct: 221 EMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLLDLYAKCD 280
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + E++ VSW+S+I G A NGF +EAL++F M+ + L P T VGVL
Sbjct: 281 AIWEX--------ERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLY 332
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTT--LIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G L+ G M + EF P + ++D+ ++ G + QA + + M +
Sbjct: 333 ACSHCGMLDEGFDYFRRM-KEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPN 391
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
V W ++ +++G++ + L K + +G+
Sbjct: 392 AVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGD 428
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/534 (41%), Positives = 322/534 (60%), Gaps = 8/534 (1%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
+L Y+ + AL F+ +P K++ SW +ISG+ G +++A ++F + + +
Sbjct: 142 MLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEK----N 197
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S +++ + GDL A+ ++ V ++V V T+++ Y K G +E A R+F
Sbjct: 198 GVSWSAMISGYVEHGDLEAAEELYKNVGM----KSVVVETAMLTGYMKFGKVELAERIFQ 253
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M K++V+W+SMI GY N ++ L +F M ++P ++ VL C++L AL L
Sbjct: 254 RMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPL 313
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + ++ + T+LI MY KCG + A K+F EM KD + WNA++SG +
Sbjct: 314 GRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQ 373
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+G + A +F ++ ++P+ TFV ++ C HAG VD G Q+F SM + F +
Sbjct: 374 HGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPV 433
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
HY C++DLLGR+G+LDEA LIK MP +P+A ++G LL CR+HK DLAE L+ L
Sbjct: 434 HYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNL 493
Query: 431 EPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNS 490
+P ++ YV L+NIY+A++KW+ AK+R MM + + KI G SW+E+ V HEF D
Sbjct: 494 DPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRL 553
Query: 491 HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTA 550
HP I+ KL+EL K+K AG+VP + L D+EEE K+ L HSEKLA+AFGL+ TA
Sbjct: 554 HPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTA 613
Query: 551 PKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P IR+ KNLRVCGDCH AIK IS I REIIVRD RFH F G CSC D+W
Sbjct: 614 PGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 162/300 (54%), Gaps = 11/300 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF N Q A + ++ M + ++ ++ D + + L G
Sbjct: 173 LISGFAQNGQMQKAFDLFSVMPEKN----GVSWSAMISGYVEHGDLEA---AEELYKNVG 225
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V+T++L Y+ G + A ++F + KN+V+W ++I+GY+ E+ + +F+
Sbjct: 226 MK-SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFK 284
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ ++P+ S+ VL C+ L L + +H V+++ ++ TSL+ +Y KCG
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCG 344
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A ++F +MP KD++SW++MI GYA +G ++AL +F M+ +KP++ T V V+
Sbjct: 345 DLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVIL 404
Query: 241 ACASLGALELGVWASSFMERNEF--LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
AC G ++LGV M++ EF + PV T +ID+ + GR+ +A + +EM K
Sbjct: 405 ACNHAGFVDLGVQYFKSMKK-EFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPH 463
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 165/337 (48%), Gaps = 25/337 (7%)
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
+VVS I+ ++ +LE A N+F ++ R + + +L+ T++ K H
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVR----TTVTWNTMLSGYTKVA--GKVKEAH 125
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
++ + +V LV Y + +E A F++MP KDI SW+++I G+A NG +
Sbjct: 126 ELFDKIPEPDSVSYNIMLV-CYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQ 184
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG-VWASSFMERNEFLSNPVLGTTL 273
+A D+F M +N GV + G +E G + A+ + +N + + V+ T +
Sbjct: 185 KAFDLFSVMPEKN---------GVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAM 235
Query: 274 IDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+ Y K G++ A ++F+ M K+ V WN++++G N + VF + + ++PN
Sbjct: 236 LTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNP 295
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG---RSGQLDEAHE 390
+ +L GC++ + GRQ M ++ S +P+ + L+ + G LD A +
Sbjct: 296 LSLSSVLLGCSNLSALPLGRQ----MHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWK 351
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
L MP + + I W A+++G H A H+ +++
Sbjct: 352 LFLEMPRK-DVISWNAMISGYAQHGAGRKALHLFDKM 387
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/534 (41%), Positives = 321/534 (60%), Gaps = 8/534 (1%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
+L Y+ + AL F+ +P K++ SW +ISG+ G +++A ++F + + +
Sbjct: 142 MLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEK----N 197
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S +++ + GDL A+ ++ V ++V V T+++ Y K G +E A R+F
Sbjct: 198 GVSWSAMISGYVEHGDLEAAEELYKNVGM----KSVVVETAMLTGYMKFGKVELAERIFQ 253
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M K++V+W+SMI GY N ++ L +F M ++P ++ VL C++L AL L
Sbjct: 254 RMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPL 313
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + ++ + T+LI MY KCG + A K+F EM KD + WNA++SG +
Sbjct: 314 GRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQ 373
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+G + A +F ++ ++P+ TFV ++ C HAG VD G Q+F SM + F +
Sbjct: 374 HGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPV 433
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
HY C++DLLGR+G+LDEA LIK MP P+A ++G LL CR+HK DLAE L+ L
Sbjct: 434 HYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNL 493
Query: 431 EPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNS 490
+P ++ YV L+NIY+A++KW+ AK+R MM + + KI G SW+E+ V HEF D
Sbjct: 494 DPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRL 553
Query: 491 HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTA 550
HP I+ KL+EL K+K AG+VP + L D+EEE K+ L HSEKLA+AFGL+ TA
Sbjct: 554 HPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTA 613
Query: 551 PKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P IR+ KNLRVCGDCH AIK IS I REIIVRD RFH F G CSC D+W
Sbjct: 614 PGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 161/295 (54%), Gaps = 11/295 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF N Q A + ++ M + ++ ++ D + + L G
Sbjct: 173 LISGFAQNGQMQKAFDLFSVMPEKN----GVSWSAMISGYVEHGDLEA---AEELYKNVG 225
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V+T++L Y+ G + A ++F + KN+V+W ++I+GY+ E+ + +F+
Sbjct: 226 MK-SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFK 284
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ ++P+ S+ VL C+ L L + +H V+++ ++ TSL+ +Y KCG
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCG 344
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++ A ++F +MP KD+++W++MI GYA +G ++AL +F M+ +KP++ T V V+
Sbjct: 345 DLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVIL 404
Query: 241 ACASLGALELGVWASSFMERNEF--LSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
AC G ++LGV M++ EF + PV T +ID+ + GR+ +A + +EM
Sbjct: 405 ACNHAGFVDLGVQYFKSMKK-EFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEM 458
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 165/337 (48%), Gaps = 25/337 (7%)
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
+VVS I+ ++ +LE A N+F ++ R + + +L+ T++ K H
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVR----TTVTWNTMLSGYTKVA--GKVKEAH 125
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
++ + +V LV Y + ++ A F++MP KDI SW+++I G+A NG +
Sbjct: 126 ELFDKIPEPDSVSYNIMLV-CYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQ 184
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG-VWASSFMERNEFLSNPVLGTTL 273
+A D+F M +N GV + G +E G + A+ + +N + + V+ T +
Sbjct: 185 KAFDLFSVMPEKN---------GVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAM 235
Query: 274 IDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+ Y K G++ A ++F+ M K+ V WN++++G N + VF + + ++PN
Sbjct: 236 LTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNP 295
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG---RSGQLDEAHE 390
+ +L GC++ + GRQ M ++ S +P+ + L+ + G LD A +
Sbjct: 296 LSLSSVLLGCSNLSALPLGRQ----MHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWK 351
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
L MP + + I W A+++G H A H+ +++
Sbjct: 352 LFLEMPRK-DVITWNAMISGYAQHGAGRKALHLFDKM 387
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/605 (34%), Positives = 348/605 (57%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G++ N I M +EG + P + + +C + G + H L++K
Sbjct: 103 LMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKT 162
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G +V+ +L+++Y C + DA+ V++++P ++V++ +I+S + G L E + +
Sbjct: 163 GFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVL 222
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R ++ +K D + V + C L DL +HG + + + +V+++++++Y KC
Sbjct: 223 RSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKC 282
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G AR VFD + +++V W++++ NG +EAL++F M++EN+K +T +L
Sbjct: 283 GKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLL 342
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
+ACA L A G E++ F + ++G LI+MYAK G + A KVF +M +D +
Sbjct: 343 NACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDII 402
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ G S +G K A VF + PN TF G+L C H GLV EG + + +
Sbjct: 403 TWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHL 462
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ F + P +EHY C+V LL ++GQL+EA +++ P++ + + W LL C +H+ L
Sbjct: 463 MKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGL 522
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
V ++ ++P + G Y LLSNIY+ +W+ K+R +M DK I+K G SW+E+
Sbjct: 523 GRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGN 582
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V H F DN HP + Y K+ EL +K G+ P VL D+E+E+K+Y+L+ HSEK
Sbjct: 583 VTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEK 642
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GL+ + I + KNLR+C DCH A++LISK+T R I+VRD NRFH F +G CS
Sbjct: 643 LAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCS 702
Query: 600 CKDFW 604
C D+W
Sbjct: 703 CLDYW 707
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 213/416 (51%), Gaps = 9/416 (2%)
Query: 36 VLKACAREHDFQLGVRSHS-LIVKAGLDCDEFVKT-SLLNLYVHCGYLADALKVFDDIPD 93
+LK A + ++G HS LIV + + ++ SL+N Y ++ A +FD +P+
Sbjct: 35 LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPE 94
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKW 152
+NVVSW+A+++GY+ G + I + + ++ G + P+ + + +++C G + +
Sbjct: 95 RNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQ 154
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
HG + + G + +V +LV +Y+KC ++ A V++++P DIV+++S++ NG+
Sbjct: 155 CHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGY 214
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+E L++ +M E++K + T V S CASL L LG+ M ++ + + +
Sbjct: 215 LREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSA 274
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
+I+MY KCG+ A VF ++ ++ V+W AV++ NG + A +F ++E+ ++ N
Sbjct: 275 IINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSN 334
Query: 333 GNTFVGLLCGCTHAGL-VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
T+ LL C AGL + S + ++++ +SG ++ A ++
Sbjct: 335 EFTYAVLLNAC--AGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKV 392
Query: 392 IKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
M M + I W A++ G H A V ++A E NYV + + SA
Sbjct: 393 FSDM-MHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAE--EHPNYVTFTGVLSA 445
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 138/298 (46%), Gaps = 19/298 (6%)
Query: 127 LKPDSFS------IVRVLTACTQLGDLSTAKWIHGY--VNEAGKGRNVFVATSLVDLYAK 178
L+P++ S ++++L +L K IH + V ++ SL++ YAK
Sbjct: 19 LRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAK 78
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVG 237
+ A +FD+MPE+++VSWS+++ GY NGF + + + +M E N+ P Y +
Sbjct: 79 VNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAI 138
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+S+C G +E G + + F + + L+ MY+KC + A V+ E+ D
Sbjct: 139 AISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVND 198
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V +N+++S L NGY++ V + ++ + TFV C + G
Sbjct: 199 IVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHG 258
Query: 358 SMSRVFSLTPMIE----HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
M LT +E ++++ G+ G+ A + + N ++W A++A C
Sbjct: 259 KM-----LTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGL-QSRNVVLWTAVMASC 310
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/535 (40%), Positives = 329/535 (61%), Gaps = 4/535 (0%)
Query: 74 LYVHC--GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL--KP 129
+Y +C G + D L++F ++P +NV+SWT++I G G EEA+ +FR+++ G+ KP
Sbjct: 142 IYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKP 201
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
S + V+TAC L IH +V + G + +++ +L+ YA C ME + RVF
Sbjct: 202 TSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF 261
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
++V W++++ GY N ++AL +F M RE + P + L++C L AL+
Sbjct: 262 HGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALD 321
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + + ++ +G +LI MY +CG + +F+ + K+ V WN+V+ G +
Sbjct: 322 WGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCA 381
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G A F Q+ + ++P+ TF GLL C+H+G+ +GR F S S +
Sbjct: 382 QHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKL 441
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+HY CMVD+LGRSG+L+EA ELI++MP++ N++VW LL+ C +H K ++AE +I
Sbjct: 442 DHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIID 501
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
LEP S YVLLSN+Y+++ +W+D ++IR M +GI K G SW+ + G +EFL GD
Sbjct: 502 LEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDR 561
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
SHP S++IY KL+ L KLK G+VP L D+E+E+K+ L+ HSE+LA+ FGLI+T
Sbjct: 562 SHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLIST 621
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I + KNLRVCGDCH AIKLI+KI R+IIVRD+ RFH F++G CSC D+W
Sbjct: 622 VEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 164/321 (51%), Gaps = 4/321 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGF--LPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G + + A+ + M G PT+ T+ V+ ACA GV+ H+ + K
Sbjct: 172 MIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFK 231
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
G D ++ +L+ Y +C + D+L+VF NVV WTA+++GY E+A+ +
Sbjct: 232 LGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKV 291
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++ G+ P+ S L +C L L + IH + G +VFV SL+ +Y +
Sbjct: 292 FGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYR 351
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CGN+ +F ++ +K+IVSW+S+I G A +G AL F M R ++P+ T G+
Sbjct: 352 CGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGL 411
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDK- 296
LSAC+ G + G + N+ + ++D+ + G++ +A ++ R M K
Sbjct: 412 LSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKA 471
Query: 297 DQVVWNAVVSGLSMNGYVKVA 317
+ +VW ++S +M+ ++VA
Sbjct: 472 NSMVWLVLLSACTMHSKLEVA 492
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 187/411 (45%), Gaps = 51/411 (12%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK-TSLLNLYVHCGYLADAL 85
P + + ++ AR + F H+L + + + V S++ C L A
Sbjct: 39 FPDVYLYTMMITGYARNYRFD-----HALQLFYEMPVKDVVSWNSMIKGCFDCADLTMAR 93
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
K+FD++P+++VVSWT +I+G++ G +E A +F ++ R +
Sbjct: 94 KLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDI------------------ 135
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
A W S++ Y G +E R+F +MP ++++SW+SMI
Sbjct: 136 ----AAW-----------------NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIG 174
Query: 206 GYASNGFPKEALDMFYNMQ--RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
G +G +EAL +F M +KP T V++ACA+ AL GV + + + +
Sbjct: 175 GLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGY 234
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ + LI YA C +M + +VF + V+W A+V+G +N + A VFG+
Sbjct: 235 SFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGE 294
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
+ + G+ PN ++F L C +D GR+ + ++ L + ++ + R G
Sbjct: 295 MMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKL-GLETDVFVGNSLIVMYYRCG 353
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEP 432
L++ + K + + N + W +++ GC H A NQ++ +EP
Sbjct: 354 NLNDGVVIFKRIS-KKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEP 403
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/604 (38%), Positives = 351/604 (58%), Gaps = 15/604 (2%)
Query: 10 CFQHAIEFYNSMRNEGFLPTNFT---FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEF 66
C H + NS L F + +LK C +F+ + H+ I+K GL D F
Sbjct: 8 CQSHLLSLPNSPLQSSELNAKFNEQGWLSLLKRCKSMEEFK---KVHAHILKLGLFYDSF 64
Query: 67 VKTSLLNLYVHC-----GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ NL C G + A +F I + + +I G +N +LEEA+ ++
Sbjct: 65 CGS---NLVASCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVE 121
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+L RG++PD+F+ VL AC+ L L IH +V AG +VFV L+ +Y KCG
Sbjct: 122 MLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGA 181
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL-KPEYYTMVGVLS 240
+E A VF+QM EK + SWSS+I +AS E L + +M RE + E +V LS
Sbjct: 182 IEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALS 241
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC LG+ LG + RN N V+ T+LIDMY KCG + + VF+ M K++
Sbjct: 242 ACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYS 301
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
+ +++GL+++G + A VF + + G+ P+ +VG+L C+HAGLV EG Q FN M
Sbjct: 302 YTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQ 361
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P I+HYGCMVDL+GR+G L EA++LIKSMP++PN +VW +LL+ C++H ++
Sbjct: 362 FEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIG 421
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + + L N G+Y++L+N+Y+ + KW + A+IR+ M +K + + G S VE +
Sbjct: 422 EIAADNIFKLNKHNPGDYLVLANMYARAQKWANVARIRTEMVEKNLVQTPGFSLVEANRN 481
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V++F+ D S P E IY + ++ +LK G+ P VL D++E+EK+ L HS+KL
Sbjct: 482 VYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKL 541
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF LI T+ +RI++NLR+C DCH K IS I REI VRD+NRFH F +G+CSC
Sbjct: 542 AIAFALIQTSEGSPVRISRNLRMCNDCHTYTKFISVIYEREITVRDSNRFHHFKDGTCSC 601
Query: 601 KDFW 604
KD+W
Sbjct: 602 KDYW 605
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 175/321 (54%), Gaps = 5/321 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG V++ + A+ Y M G P NFT+PFVLKAC+ + GV+ H+ + AG
Sbjct: 102 MIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAG 161
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+ L+++Y CG + A VF+ + +K+V SW++II + + E + +
Sbjct: 162 LEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLG 221
Query: 121 RLLHRGLKPDSFSI-VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G SI V L+ACT LG + + IHG + NV V TSL+D+Y KC
Sbjct: 222 DMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKC 281
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++EK VF M K+ S++ MI G A +G +EAL +F +M E L P+ VGVL
Sbjct: 282 GSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVL 341
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK- 296
SAC+ G ++ G + M+ E + P + ++D+ + G + +A + + M K
Sbjct: 342 SACSHAGLVKEGFQCFNRMQF-EHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKP 400
Query: 297 DQVVWNAVVSGLSMNGYVKVA 317
+ VVW +++S ++ +++
Sbjct: 401 NDVVWRSLLSACKVHHNLEIG 421
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/522 (40%), Positives = 327/522 (62%), Gaps = 1/522 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A +F I D + +I GY+N + EEA+ + ++ RG +PD+F+ +L ACT+
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L + K IHG V + G +VFV SL+++Y +CG ME + VF+++ K SWSSM
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 204 IQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
+ A G E L +F M E NLK E MV L ACA+ GAL LG+ F+ RN
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
N ++ T+L+DMY KCG + +A +F++M+ ++ + ++A++SGL+++G + A +F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
++ K G++P+ +V +L C+H+GLV EGR+ F M + + P EHYGC+VDLLGR+
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLS 442
G L+EA E I+S+P+E N ++W L+ CR+ + +L + +L+ L N G+Y+L+S
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLIS 444
Query: 443 NIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLD 502
N+YS W+D A+ R+ + KG+++ G S VE+ G H F+ D SHP ++IY L
Sbjct: 445 NLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLH 504
Query: 503 ELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
++ +LK G+ P +L +++EEEK+ L HS+K+A+AFGL+ T P +I+IA+NLR
Sbjct: 505 QMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLR 564
Query: 563 VCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+C DCH K IS I REI+VRD NRFH F G+CSCKD+W
Sbjct: 565 MCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 171/310 (55%), Gaps = 5/310 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+V+ F+ A+ FYN M G P NFT+P +LKAC R + G + H + K G
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLG 162
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+ SL+N+Y CG + + VF+ + K SW++++S G E + +FR
Sbjct: 163 LEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFR 222
Query: 121 RLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ LK + +V L AC G L+ IHG++ N+ V TSLVD+Y KC
Sbjct: 223 GMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKC 282
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++KA +F +M +++ +++S+MI G A +G + AL MF M +E L+P++ V VL
Sbjct: 283 GCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVL 342
Query: 240 SACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DK 296
+AC+ G ++ G V+A E + G L+D+ + G + +A + + + +K
Sbjct: 343 NACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYG-CLVDLLGRAGLLEEALETIQSIPIEK 401
Query: 297 DQVVWNAVVS 306
+ V+W +S
Sbjct: 402 NDVIWRTFLS 411
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/535 (40%), Positives = 329/535 (61%), Gaps = 4/535 (0%)
Query: 74 LYVHC--GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG--LKP 129
+Y +C G + D L++F ++P +NV+SWT++I G G EEA+ +FR+++ G +KP
Sbjct: 126 IYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKP 185
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
S + V+TAC L IH +V + G + +++ +L+ YA C ME + RVF
Sbjct: 186 TSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF 245
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
++V W++++ GY N ++AL +F M RE + P + L++C L AL+
Sbjct: 246 HGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALD 305
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + + ++ +G +LI MY +CG + +F+ + K+ V WN+V+ G +
Sbjct: 306 WGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCA 365
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G A F Q+ + ++P+ TF GLL C+H+G+ +GR F S S +
Sbjct: 366 QHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKL 425
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+HY CMVD+LGRSG+L+EA ELI++MP++ N++VW LL+ C +H K ++AE +I
Sbjct: 426 DHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIID 485
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
LEP S YVLLSN+Y+++ +W+D ++IR M +GI K G SW+ + G +EFL GD
Sbjct: 486 LEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDR 545
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
SHP S++IY KL+ L KLK G+VP L D+E+E+K+ L+ HSE+LA+ FGLI+T
Sbjct: 546 SHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLIST 605
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I + KNLRVCGDCH AIKLI+KI R+IIVRD+ RFH F++G CSC D+W
Sbjct: 606 VEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 164/321 (51%), Gaps = 4/321 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGF--LPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G + + A+ + M G PT+ T+ V+ ACA GV+ H+ + K
Sbjct: 156 MIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFK 215
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
G D ++ +L+ Y +C + D+L+VF NVV WTA+++GY E+A+ +
Sbjct: 216 LGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKV 275
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++ G+ P+ S L +C L L + IH + G +VFV SL+ +Y +
Sbjct: 276 FGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYR 335
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CGN+ +F ++ +K+IVSW+S+I G A +G AL F M R ++P+ T G+
Sbjct: 336 CGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGL 395
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDK- 296
LSAC+ G + G + N+ + ++D+ + G++ +A ++ R M K
Sbjct: 396 LSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKA 455
Query: 297 DQVVWNAVVSGLSMNGYVKVA 317
+ +VW ++S +M+ ++VA
Sbjct: 456 NSMVWLVLLSACTMHSKLEVA 476
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 187/411 (45%), Gaps = 51/411 (12%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK-TSLLNLYVHCGYLADAL 85
P + + ++ AR + F H+L + + + V S++ C L A
Sbjct: 23 FPDVYLYTMMITGYARNYRFD-----HALQLFYEMPVKDVVSWNSMIKGCFDCADLTMAR 77
Query: 86 KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
K+FD++P+++VVSWT +I+G++ G +E A +F ++ R +
Sbjct: 78 KLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDI------------------ 119
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
A W S++ Y G +E R+F +MP ++++SW+SMI
Sbjct: 120 ----AAW-----------------NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIG 158
Query: 206 GYASNGFPKEALDMFYNMQ--RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
G +G +EAL +F M +KP T V++ACA+ AL GV + + + +
Sbjct: 159 GLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGY 218
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ + LI YA C +M + +VF + V+W A+V+G +N + A VFG+
Sbjct: 219 SFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGE 278
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
+ + G+ PN ++F L C +D GR+ + ++ L + ++ + R G
Sbjct: 279 MMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKL-GLETDVFVGNSLIVMYYRCG 337
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEP 432
L++ + K + + N + W +++ GC H A NQ++ +EP
Sbjct: 338 NLNDGVVIFKRIS-KKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEP 387
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 125/286 (43%), Gaps = 55/286 (19%)
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+++AR VFD++ D+ ++ MI GYA N AL +FY M +++ + +M+
Sbjct: 11 IDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDV-VSWNSMIKGCFD 69
Query: 242 CASLGALELGVWASSFMERNEFLSNP----VLGTTLID---------------------- 275
CA L M R F P V TT+I+
Sbjct: 70 CADLT-----------MARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRD 118
Query: 276 -------MYAKC--GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
+Y C GR+ ++F+EM ++ + W +++ GL +G + A G+F Q+
Sbjct: 119 IAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMG 178
Query: 327 CGIQ--PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY--GCMVDLLGRS 382
CG++ P +T+ ++ C +A + +G Q + VF L + Y ++
Sbjct: 179 CGVEVKPTSSTYCCVITACANASALYQGVQIH---AHVFKLGYSFDAYISAALITFYANC 235
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
Q++++ + + N ++W AL+ G L+ K + A V +++
Sbjct: 236 KQMEDSLRVFHG-KLHMNVVIWTALVTGYGLNCKHEDALKVFGEMM 280
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/617 (37%), Positives = 356/617 (57%), Gaps = 38/617 (6%)
Query: 20 SMRNEGFL----PTN--FTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
S N FL P N F P + + ++F + H+ I+ GL + + L+
Sbjct: 130 SSSNSNFLDFMKPKNHIFNHPTLQTLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIK 189
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEE---AINMFRRLL-HRGLKP 129
+ L A K+F+ I + + + +IS IN+ N + A +++ ++L ++ L+P
Sbjct: 190 ISSKFN-LPYAFKIFNYISNPTIFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQP 248
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIH-------GYVNEAGKGRNVFVATSLVDLYAKCGNM 182
+SF+ + AC S W H + + FV SL++ YAK G M
Sbjct: 249 NSFTFPSLFKACC-----SNQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKM 303
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASN-------------GFPKEALDMFYNMQRENLK 229
+R +FD++ E D+ +W+ ++ YA + F E+L +F +MQ ++
Sbjct: 304 CVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIR 363
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P T+V ++SAC++LGA+ G W F+ RN+ N +GT +DMY+KCG + AC+V
Sbjct: 364 PNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQV 423
Query: 290 FREM--KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
F +M D+D + A++ G +++GY A ++ +++ G+ P+ TFV + C+H G
Sbjct: 424 FDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVG 483
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
LV+EG + F SM V + P +EHYGC++DLLGR+G+L EA E + MPM+PNA++W +L
Sbjct: 484 LVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSL 543
Query: 408 LAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
L R+H + E L +LI LEP SGNYVLLSN+Y++ + ND ++R +M G+
Sbjct: 544 LGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVN 603
Query: 468 KIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEE 527
K+ G S VE+ G +HEFL GD SHP S++IY K+ E+ ++L+ G T LFD+EEE
Sbjct: 604 KLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYGHKARTSEALFDLEEE 663
Query: 528 EKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDN 587
+K+ L+ HSE+LA+AF LI + IRI KNLRVCGDCH KLIS REIIVRD
Sbjct: 664 DKEGVLSYHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTKLISVAYHREIIVRDR 723
Query: 588 NRFHCFIEGSCSCKDFW 604
NRFH F +GSCSC D+W
Sbjct: 724 NRFHHFKDGSCSCLDYW 740
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 4/195 (2%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
++ + M+ G P T ++ AC+ G H +++ + + FV T+ ++
Sbjct: 350 SLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVD 409
Query: 74 LYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+Y CG L A +VFD +P D++ +TA+I G+ G +A+ ++R++ +GL PDS
Sbjct: 410 MYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDS 469
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ V + AC+ +G + I + E G + L+DL + G +++A
Sbjct: 470 ATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLA 529
Query: 191 QMPEK-DIVSWSSMI 204
MP K + V W S++
Sbjct: 530 DMPMKPNAVLWRSLL 544
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/609 (37%), Positives = 335/609 (55%), Gaps = 32/609 (5%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P T+ +++ C++ + G + H I +G + +L +Y CG L DA KV
Sbjct: 85 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKV 144
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR---------------------- 125
FD++P+++V SW +++GY G LEEA N+F + R
Sbjct: 145 FDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEAL 204
Query: 126 ----------GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
KP+ F++ + A + + K IHG++ AG + + +SL+D+
Sbjct: 205 VLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 264
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y KCG +++AR +FD++ +KD+VSW+SMI Y + +E +F + +P YT
Sbjct: 265 YGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTF 324
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
GVL+ACA L ELG +M R F ++LIDMY KCG + A V
Sbjct: 325 SGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPK 384
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
D V +++ G + NG A F L K G +P+ TFV +L CTHAGLV++G +F
Sbjct: 385 PDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 444
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F S++ LT +HY C+VDLL RSG+ ++ ++ MPM+P+ +W ++L GC +
Sbjct: 445 FYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYG 504
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
DLAE +L +EP N YV ++NIY+A+ KW + K+R M + GI K G SW
Sbjct: 505 NIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWT 564
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
E+ H F+ D SHP+ +I L EL K+K G+VP T VL D+E+E+K+ L
Sbjct: 565 EIKRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVY 624
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+AF +++T I++ KNLR C DCH AIK ISKIT R+I +RD+ RFHCF
Sbjct: 625 HSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFEN 684
Query: 596 GSCSCKDFW 604
G CSC+D+W
Sbjct: 685 GQCSCRDYW 693
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 190/366 (51%), Gaps = 6/366 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+ G+V D + A+ Y+ M R P FT + A A + G H IV+A
Sbjct: 190 MVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRA 249
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD DE + +SL+++Y CG + +A +FD I DK+VVSWT++I Y E ++F
Sbjct: 250 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLF 309
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
L+ +P+ ++ VL AC L + +HGY+ G F ++SL+D+Y KC
Sbjct: 310 SELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKC 369
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+E AR V D P+ D+VS +S+I GYA NG P EAL F + + KP++ T V VL
Sbjct: 370 GNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVL 429
Query: 240 SACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-D 297
SAC G +E G+ + S E+++ T L+D+ A+ GR Q V EM K
Sbjct: 430 SACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPS 489
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFF 356
+ +W +V+ G S G + +A +L K I+P N T+V + AG +E +
Sbjct: 490 KFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEEEGKMR 547
Query: 357 NSMSRV 362
M +
Sbjct: 548 KRMQEI 553
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 174/368 (47%), Gaps = 40/368 (10%)
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
L EA+ +LL R KP + + ++ C+Q L K +H ++ +G + +
Sbjct: 72 LREAV----QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 127
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF------------------- 212
++ +YAKCG++ AR+VFD+MPE+D+ SW+ M+ GYA G
Sbjct: 128 ILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSW 187
Query: 213 ------------PKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
P+EAL ++ MQR N KP +T+ ++A A++ + G +
Sbjct: 188 TAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIV 247
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
R S+ VL ++L+DMY KCG + +A +F ++ DKD V W +++ + + F
Sbjct: 248 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFS 307
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F +L +PN TF G+L C + GRQ M+RV P ++D+
Sbjct: 308 LFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRV-GFDPYSFASSSLIDMY 366
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
+ G ++ A ++ P +P+ + +L+ G + K D A + L L+ ++V
Sbjct: 367 TKCGNIESARHVVDGCP-KPDLVSLTSLIGGYAQNGKPDEALKYFDLL--LKSGTKPDHV 423
Query: 440 LLSNIYSA 447
N+ SA
Sbjct: 424 TFVNVLSA 431
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/604 (37%), Positives = 346/604 (57%), Gaps = 7/604 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + ND + A M G LP +F VL +C + Q+ I+++G
Sbjct: 512 MLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQV---LRMCILESG 568
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++T+L++++ C L A VF+++ +VVSWTA++S + +E N+FR
Sbjct: 569 YR-SACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFR 627
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+ PD F++ L C L K IH V E G ++ V +L+++Y+ CG
Sbjct: 628 RMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCG 687
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +A F+ M +D+VSW+ M YA G KEA+ +F MQ E +KP+ T L+
Sbjct: 688 DWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLN 747
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+ G + + S+ + T L+ +YAKCG++ +A +FR D V+
Sbjct: 748 VSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVL 807
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
NA++ L+ +G+ + A +F ++++ G++P+ T V ++ C HAG+V+EG F +M
Sbjct: 808 LNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMK 867
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
F ++P +EHY C VDLLGR+GQL+ A ++I+ MP E N +VW +LL C+L +L
Sbjct: 868 EYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELG 927
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +++ L+P NS +V+LSNIY A+ KW DA R M D+ ++ G SW E+
Sbjct: 928 ERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQ 987
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEF+ GD SHP +++IY LD+L ++ AG+ D+E+E K+ L HSE++
Sbjct: 988 VHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYEADKG---LDVEDELKEKALGYHSERI 1044
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI T P+ ++I KNLRVCGDCH A K IS + GREIIVRD+ RFH F G+CSC
Sbjct: 1045 AIAFGLIATPPETTLKIVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSC 1104
Query: 601 KDFW 604
KD W
Sbjct: 1105 KDCW 1108
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 213/417 (51%), Gaps = 25/417 (5%)
Query: 11 FQHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLD----CDE 65
F A + +M E P ++T +L ACA D +G H++I + GL+
Sbjct: 107 FARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTAT 166
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL-EEAINMFRRLLH 124
V +++N+Y CG L DA+ VF IP+K+VVSWTA+ Y E +A+ +FR +L
Sbjct: 167 LVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLL 226
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
+ L P+ + + L ACT L D W+H ++EA G + + +L+++Y KCG+ E
Sbjct: 227 QPLAPNVITFITALGACTSLRD---GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEG 283
Query: 185 ARRVFDQMP---EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
A VF M E D+VSW++MI G +A+ +F ++ E ++P T++ +L+A
Sbjct: 284 AYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNA 343
Query: 242 CASLGALELGVWASSFMER---NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-D 297
A+ G ++ G A F R + +L + V+G +I MYAKCG + A VFR ++ K D
Sbjct: 344 LAASG-VDFGA-ARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCD 401
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+ WN ++ F + GI PN +F+ +L C+++ +D GR+ +
Sbjct: 402 VISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHS 461
Query: 358 ---SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV-WGALLAG 410
+ R + + + +V + G+ G + EA + K MP+ ++V W +L
Sbjct: 462 LILTRRRDYVESSVATM---LVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA 515
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 215/444 (48%), Gaps = 23/444 (5%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +L++C +D G +H LI AGL+ F+ L+N+YV CG L +A +F +
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRR-LLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
++NVVSWTA+IS G A +FR LL P+S+++V +L AC DL+ +
Sbjct: 88 ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 152 WIHGYVNEAGKGRNVFVAT----SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
IH + E G R AT +++++YAKCG++E A VF +PEKD+VSW++M Y
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207
Query: 208 AS-NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
A F +AL +F M + L P T + L AC S L G W S + +
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHEASLGFD 264
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDK---DQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
P+ LI+MY KCG A VF+ M + D V WNA++S G A +F +
Sbjct: 265 PLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRR 324
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEG--RQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
L G++PN T + +L +G VD G R F + L ++ ++ + +
Sbjct: 325 LRLEGMRPNSVTLITILNALAASG-VDFGAARGFHGRIWESGYLRDVVIG-NAIISMYAK 382
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK----TDLAEHVLNQLIALEPWNSGN 437
G A + + + + + I W +L K + H+L L ++P N +
Sbjct: 383 CGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHML--LAGIDP-NKVS 439
Query: 438 YVLLSNIYSASHKWNDAAKIRSMM 461
++ + N S S + KI S++
Sbjct: 440 FIAILNACSNSEALDFGRKIHSLI 463
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 193/386 (50%), Gaps = 8/386 (2%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLD-CDEFVKT 69
F + ++ M G P +F +L AC+ G + HSLI+ D + V T
Sbjct: 418 FGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT 477
Query: 70 SLLNLYVHCGYLADALKVFDD--IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL 127
L+++Y CG +++A VF + +P +++V+W ++ Y +EA +L G+
Sbjct: 478 MLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGV 537
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
PD+ S VL++C + A+ + + E+G R+ + T+L+ ++ +C +E+AR
Sbjct: 538 LPDALSFTSVLSSCYCSQE---AQVLRMCILESGY-RSACLETALISMHGRCRELEQARS 593
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
VF++M D+VSW++M+ A N KE ++F MQ E + P+ +T+ L C +
Sbjct: 594 VFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTT 653
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
L LG + + ++ + L++MY+ CG +A F MK +D V WN + +
Sbjct: 654 LGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA 713
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
+ G K A +F Q++ G++P+ TF L + LV +G+ F++++ L
Sbjct: 714 YAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGK-LFHALAAESGLDS 772
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIK 393
+ +V L + G+LDEA L +
Sbjct: 773 DVSVATGLVKLYAKCGKLDEAMSLFR 798
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/631 (37%), Positives = 357/631 (56%), Gaps = 61/631 (9%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC---DEFVKTSLLNLYVHCGYLAD 83
LP F +L++CAR G + H++I+ +GL + F+ +L +LY CG +
Sbjct: 14 LPARFRS--LLRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSS 71
Query: 84 ALKVFDDIP--DKNVVSWTAIISGYINEGNL-EEAINMFRRLLHRGLKPDSFSIVRVLTA 140
A +F IP K+V WT +++ + G E F+ + G+ D +++ V
Sbjct: 72 ARHLFYQIPRSHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVL 131
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF----------- 189
CT++ DL + G + + G G V V +++++Y KCG +E+ RRVF
Sbjct: 132 CTRVEDLGMGRQAQGCLVKMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSW 191
Query: 190 --------------------DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENL 228
D+MPE++ V W+ MI GY NGF +E + M R L
Sbjct: 192 STLLEGVVKWEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRL 251
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSF----MERNEFLSNPVLGTTLIDMYAKCGRMA 284
+ T+ +LSACA G + +G W + M R + ++GT L+DMYAKCG +
Sbjct: 252 GLNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGREMHI---MVGTALVDMYAKCGPID 308
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A KVF+ + ++ V WNA++ GL+M+G K +F ++ + +P+ TF+ +L C+
Sbjct: 309 MAFKVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDIFPKMIE-EAKPDDLTFMAVLSACS 367
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
H+GLVD+G +F S+ + TP IEHY CMVD+LGR+G L+EA LIK MPM PN +V
Sbjct: 368 HSGLVDQGYHYFRSLESEYGTTPKIEHYACMVDILGRAGHLEEAVMLIKKMPMCPNEVVL 427
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
G+LL C H K L E +L +LI ++ N+ +VLLSN+Y K + A +R ++ K
Sbjct: 428 GSLLGSCNAHGKLQLGERILQELIQMDGHNTEYHVLLSNMYVLEGKQDKANSLRQILKSK 487
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLF-- 522
GI+K+ G S + V G +H+F GD SHPL+++IY L+ + +L+ AG+VP T + +F
Sbjct: 488 GIRKVPGVSSIYVGGNIHQFSAGDKSHPLTKEIYHALNNMIQRLRLAGYVPNTTNQVFPG 547
Query: 523 ---------DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKL 573
++EE+E+ FL HSEKLA+ FG I+T P + I KNLR+C DCH AIK+
Sbjct: 548 SDGREGSSEEMEEKEQALFL--HSEKLAVCFGHISTKPGAPLYIFKNLRICQDCHSAIKI 605
Query: 574 ISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+SKI REI++RD NRFHCF GSCSC D+W
Sbjct: 606 VSKIYNREIVIRDRNRFHCFKHGSCSCSDYW 636
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 179/354 (50%), Gaps = 42/354 (11%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
F+ MR EG + + V C R D +G ++ +VK GL V +++N+YV
Sbjct: 109 FFKEMRKEGVVLDDVAMISVFVLCTRVEDLGMGRQAQGCLVKMGLGLGVKVCNAIMNMYV 168
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR----------- 125
CG + + +VF ++ ++NVVSW+ ++ G + +E +F + R
Sbjct: 169 KCGLVEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVENGRVVFDEMPERNEVGWTIMIAG 228
Query: 126 ----GLKPDSF-----------------SIVRVLTACTQLGDLSTAKWIHGY-VNEAGKG 163
G + F ++ +L+AC Q GD+ +W+H Y + G+
Sbjct: 229 YVGNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGRE 288
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
++ V T+LVD+YAKCG ++ A +VF +P++++V+W++M+ G A +G K LD+F M
Sbjct: 289 MHIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDIFPKM 348
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCG 281
E KP+ T + VLSAC+ G ++ G +E +E+ + P + ++D+ + G
Sbjct: 349 IEEA-KPDDLTFMAVLSACSHSGLVDQGYHYFRSLE-SEYGTTPKIEHYACMVDILGRAG 406
Query: 282 RMAQACKVFREMKD-KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+ +A + ++M ++VV +++ + +G +++ + +L IQ +G+
Sbjct: 407 HLEEAVMLIKKMPMCPNEVVLGSLLGSCNAHGKLQLGERILQEL----IQMDGH 456
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/636 (36%), Positives = 356/636 (55%), Gaps = 43/636 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + A+ M +G + T+ L ACAR G + H+ ++++
Sbjct: 241 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 300
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++L+ LY CG +A +VF+ + D+N VSWT +I G + +++ +F
Sbjct: 301 PQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFN 360
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + D F++ +++ C DL + +H ++G R + V+ SL+ LYAKCG
Sbjct: 361 QMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCG 420
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYAS------------------------------- 209
+++ A VF M E+DIVSW+SMI Y+
Sbjct: 421 DLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQ 480
Query: 210 NGFPKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+G ++ L M+ M ++++ P++ T V + CA +GA +LG + + N
Sbjct: 481 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVS 540
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ I MY+KCGR+++A K+F + KD V WNA+++G S +G K A F + G
Sbjct: 541 VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKG 600
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
+P+ ++V +L GC+H+GLV EG+ +F+ M+RV ++P +EH+ CMVDLLGR+G L EA
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEA 660
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
+LI MPM+P A VWGALL+ C++H +LAE + L+ +SG+Y+LL+ IYS +
Sbjct: 661 KDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDA 720
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
K +D+A++R +M DKGI+K G SW+EV+ VH F D SHP I +KLDEL K+
Sbjct: 721 GKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKI 780
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
G+V T E + HSEKLA+AFG+++ I I KNLR+CGDCH
Sbjct: 781 AHLGYVRT--------ESPRSEIH---HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCH 829
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IKLIS +T RE ++RD RFH F GSCSC D+W
Sbjct: 830 TVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 217/493 (44%), Gaps = 66/493 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ F +E + SM G LP FTF V+K+C +L + L K
Sbjct: 108 LMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKF 167
Query: 60 GLDCDEFVKTSLLNLYVHCGY-------------------------------LADALKVF 88
D V+T+L++++V CGY + A++ F
Sbjct: 168 DFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYF 227
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+D+ +++VVSW +I+ G + EA+ + + +G++ DS + LTAC +L L
Sbjct: 228 EDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLG 287
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K +H V + + +VA++L++LYAKCG+ ++A+RVF+ + +++ VSW+ +I G
Sbjct: 288 WGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSL 347
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+++++F M+ E + + + + ++S C + L LG S ++ V
Sbjct: 348 QYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIV 407
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA----------- 317
+ +LI +YAKCG + A VF M ++D V W ++++ S G + A
Sbjct: 408 VSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRN 467
Query: 318 -------FGVFGQ--------------LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
G + Q L + + P+ T+V L GC G G Q
Sbjct: 468 AITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQII 527
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+ L + + + + G++ EA +L + + + + W A++ G H
Sbjct: 528 GHTVKA-GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK-DVVSWNAMITGYSQHGM 585
Query: 417 TDLAEHVLNQLIA 429
A + +++
Sbjct: 586 GKQAAKTFDDMLS 598
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 189/438 (43%), Gaps = 66/438 (15%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFD-DIPDKN 95
L++C H +V GL F++ +LL+ Y CG L+DA ++ DI + N
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHR--------------------GLK------- 128
V++ +++GY +G+L +A +F R+ R GL+
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 129 -----PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
P++F+ V+ +C LG A + G + + V T+LVD++ +CG ++
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190
Query: 184 KARRVFDQ-------------------------------MPEKDIVSWSSMIQGYASNGF 212
A R+F Q M E+D+VSW+ MI + +G
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGR 250
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+EAL + M R+ ++ + T L+ACA L +L G + + R+ +P + +
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 310
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
LI++YAKCG +A +VF ++D++ V W ++ G + +F Q+ + +
Sbjct: 311 LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAID 370
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
L+ GC + + GRQ +S+ I ++ L + G L A +
Sbjct: 371 QFALATLISGCFNRMDLCLGRQ-LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF 429
Query: 393 KSMPMEPNAIVWGALLAG 410
SM E + + W +++
Sbjct: 430 SSMS-ERDIVSWTSMITA 446
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 159/356 (44%), Gaps = 41/356 (11%)
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
+ G L A + RL+ GL F +L A G LS A+ + + K NV
Sbjct: 16 SRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRL---LRADIKEPNVI 72
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE- 226
+++ YAK G++ A +FD+MP +D+ SW++++ GY + L+ F +M R
Sbjct: 73 THNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSG 132
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR---- 282
+ P +T V+ +C +LG EL + +F +P + T L+DM+ +CG
Sbjct: 133 DSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFA 192
Query: 283 ---------------------------MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
+ A + F +M ++D V WN +++ LS +G V+
Sbjct: 193 SRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVR 252
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY--G 373
A G+ ++ + G++ + T+ L C + G+Q ++V P I+ Y
Sbjct: 253 EALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLH---AKVIRSLPQIDPYVAS 309
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+++L + G EA + S+ + N++ W L+ G ++ + + NQ+ A
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/510 (42%), Positives = 328/510 (64%), Gaps = 15/510 (2%)
Query: 105 GYINEGNLEEAINMFRRLLHRGLKPDSFSIVR------VLTACTQLGDLSTAKWIHGYVN 158
GY+ + ++ +FR ++ DS S+V +A ++ D +H +
Sbjct: 170 GYVRNNLVYHSLELFRAMI----ASDSASVVDEAAALVAFSASARVPDRGVTASLHALIA 225
Query: 159 EAGKGRNVFVATSLVDLYAKCG--NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+ G RN V +++D YAK G ++E AR+VFD M E+D+VSW+SMI YA NG EA
Sbjct: 226 KIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEA 284
Query: 217 LDMFYNMQR--ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
+ ++ M +K + VL ACA GA++ G + + R N +GT+++
Sbjct: 285 IGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIV 344
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
DMY+KCGR+ A + FR++K+K+ + W+A+++G M+G + A +F ++++ G++PN
Sbjct: 345 DMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYI 404
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
TF+ +L C+HAGL+DEGR ++N+M + F + +EHYGCMVDLLGR+G LDEA+ LIK
Sbjct: 405 TFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKE 464
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDA 454
M ++P+A +WGALL+ CR+HK +LAE + +L L+ NSG YVLLSNIY+ + W D
Sbjct: 465 MKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDV 524
Query: 455 AKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFV 514
+IR ++ + I+K G S E+ G ++ F VGD SHP +IYS L++L +++ AG+V
Sbjct: 525 ERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYV 584
Query: 515 PTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLI 574
P T VL D++EEEK+ L HSEKLA+AF L+ + P+ VI I KNLRVC DCH A+K I
Sbjct: 585 PNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFI 644
Query: 575 SKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+KIT REII+RD RFH F +G CSC+D+W
Sbjct: 645 TKITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 178/322 (55%), Gaps = 9/322 (2%)
Query: 4 GFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
G+V N+ H++E + +M + + A AR D + H+LI K G
Sbjct: 170 GYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGF 229
Query: 62 DCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ + V ++L+ Y G L A KVFD + +++VVSW ++I+ Y G EAI ++
Sbjct: 230 ERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLY 288
Query: 120 RRLLH--RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
++L+ G+K ++ ++ VL AC G + T K IH V G NV+V TS+VD+Y+
Sbjct: 289 SKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYS 348
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCG +E A R F ++ EK+I+SWS+MI GY +G +EAL++F M+R L+P Y T +
Sbjct: 349 KCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFIS 408
Query: 238 VLSACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VL+AC+ G L+ G W ++ + + ++D+ + G + +A + +EMK K
Sbjct: 409 VLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVK 468
Query: 297 -DQVVWNAVVSGLSMNGYVKVA 317
D +W A++S ++ V++A
Sbjct: 469 PDAAIWGALLSACRIHKNVELA 490
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRN--EGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI + N AI Y+ M N G VL ACA Q G R H+ +V+
Sbjct: 271 MIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVR 330
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
GL+ + +V TS++++Y CG + A + F I +KN++SW+A+I+GY G +EA+ +
Sbjct: 331 MGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEI 390
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYA 177
F + GL+P+ + + VL AC+ G L + W + E G V +VDL
Sbjct: 391 FTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLG 450
Query: 178 KCGNMEKARRVFDQMPEK-DIVSWSSMIQG 206
+ G +++A + +M K D W +++
Sbjct: 451 RAGCLDEAYSLIKEMKVKPDAAIWGALLSA 480
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/540 (40%), Positives = 327/540 (60%), Gaps = 41/540 (7%)
Query: 100 TAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE 159
+ +++ Y + G+++ ++++F + D F+ VL + +L + K +HG +
Sbjct: 109 SKMVAFYASSGDIDSSVSVFNGI------GDYFTFPFVLKSSVELLSVWMGKCVHGLILR 162
Query: 160 AGKGRNVFVATSLVDLYAKCGNMEKARRVFD----------------------------- 190
G +++VATSL+ LY KCG + A +VFD
Sbjct: 163 IGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAI 222
Query: 191 --QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN--LKPEYYTMVGVLSACASLG 246
+MP ++IVSW++MI GY+ +G ++AL +F M +E+ ++P + T++ VL ACA L
Sbjct: 223 FERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLS 282
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK--DKDQVVWNAV 304
LE G R SN + L MYAKCG + A F ++ +K+ + WN +
Sbjct: 283 TLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTM 342
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
++ + G+ A F ++ + GIQP+ TF GLL GC+H+GLVD G ++FN MS +S
Sbjct: 343 ITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYS 402
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ P +EHY C+ DLLGR+G+L EA +L+ MPM +WG+LLA CR H+ ++AE
Sbjct: 403 INPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAA 462
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+L LEP N+GNYVLLSN+Y+ + +W + K+R+++ +G +K GCSW+E++G H F
Sbjct: 463 RKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMF 522
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
L GD SHP ++IY L+ L K+KAAG+ P T +VL DI EEEK++ L HSEKLA+AF
Sbjct: 523 LGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAF 582
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
G++ T + V+R+ KNLR+CGDCH A+ IS+I GRE+IVRD NRFH F G CSC D+W
Sbjct: 583 GILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 162/315 (51%), Gaps = 39/315 (12%)
Query: 31 FTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDD 90
FTFPFVLK+ +G H LI++ GL D +V TSL+ LY CG + DA KVFD+
Sbjct: 135 FTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDN 194
Query: 91 -------------------------------IPDKNVVSWTAIISGYINEGNLEEAINMF 119
+P +N+VSWT +ISGY G ++A+++F
Sbjct: 195 MTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLF 254
Query: 120 RRLLHR--GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
++ G++P+ +I+ VL AC QL L + IH G N V +L +YA
Sbjct: 255 DEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYA 314
Query: 178 KCGNMEKARRVFDQM--PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
KCG++ AR FD++ EK++++W++MI YAS G +A+ F M + ++P+ T
Sbjct: 315 KCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITF 374
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREM 293
G+LS C+ G +++G+ + M + NP + + D+ + GR+A+A K+ EM
Sbjct: 375 TGLLSGCSHSGLVDVGLKYFNHMS-TTYSINPRVEHYACVADLLGRAGRLAEASKLVGEM 433
Query: 294 K-DKDQVVWNAVVSG 307
+W ++++
Sbjct: 434 PMPAGPSIWGSLLAA 448
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 6/210 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE--GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G+ + Q A+ ++ M E G P T VL ACA+ + G + H L +
Sbjct: 237 MISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACR 296
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI--PDKNVVSWTAIISGYINEGNLEEAI 116
GL+ + V +L +Y CG L DA FD + +KN+++W +I+ Y + G+ +A+
Sbjct: 297 MGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAV 356
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDL 175
+ FR ++ G++PD + +L+ C+ G + K+ + V + DL
Sbjct: 357 STFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADL 416
Query: 176 YAKCGNMEKARRVFDQMPEKDIVS-WSSMI 204
+ G + +A ++ +MP S W S++
Sbjct: 417 LGRAGRLAEASKLVGEMPMPAGPSIWGSLL 446
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/524 (41%), Positives = 321/524 (61%), Gaps = 38/524 (7%)
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A++++ R+ + PD + +L + + + +H + G + FV TSL++
Sbjct: 47 ALSLYLRMRLHAVLPDLHTFPFLLQS---INTPHRGRQLHAQILLLGLANDPFVQTSLIN 103
Query: 175 LYAKCGN-------------------------------MEKARRVFDQMPEKDIVSWSSM 203
+Y+ CG + AR++FDQMPEK+++SWS M
Sbjct: 104 MYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCM 163
Query: 204 IQGYASNGFPKEALDMFYNMQR---ENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
I GY S G K AL +F ++Q L+P +TM VLSACA LGAL+ G W +++++
Sbjct: 164 IHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDK 223
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM-KDKDQVVWNAVVSGLSMNGYVKVAFG 319
+ VLGT+LIDMYAKCG + +A +F + +KD + W+A+++ SM+G +
Sbjct: 224 TGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLE 283
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F ++ G++PN TFV +LC C H GLV EG ++F M + ++PMI+HYGCMVDL
Sbjct: 284 LFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLY 343
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
R+G++++A ++KSMPMEP+ ++WGALL G R+H + E + +L+ L+P NS YV
Sbjct: 344 SRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVETCEIAITKLLELDPANSSAYV 403
Query: 440 LLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYS 499
LLSN+Y+ +W + +R +M +GI+K+ GCS VEVDGV+ EF GDNSHP +Y
Sbjct: 404 LLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYV 463
Query: 500 KLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAK 559
LDE+ +L+ G+ T VL D++EE K++ L+ HSEKLA+A+ + T+P IRI K
Sbjct: 464 MLDEIMKRLEKHGYERNTGEVLLDLDEEGKEFALSLHSEKLAIAYCFLRTSPGTTIRIVK 523
Query: 560 NLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
NLR+C DCH AIK+ISK REIIVRD NRFH F G CSCKD+
Sbjct: 524 NLRICSDCHVAIKIISKEFNREIIVRDCNRFHHFKNGLCSCKDY 567
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 197/353 (55%), Gaps = 46/353 (13%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLD 62
R V N F A+ Y MR LP TFPF+L++ H G + H+ I+ GL
Sbjct: 36 RSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQSINTPHR---GRQLHAQILLLGLA 92
Query: 63 CDEFVKTSLLNLYVHCG-------------------------------YLADALKVFDDI 91
D FV+TSL+N+Y CG + A K+FD +
Sbjct: 93 NDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAGMIHIARKLFDQM 152
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLH---RGLKPDSFSIVRVLTACTQLGDLS 148
P+KNV+SW+ +I GY++ G + A+++FR L L+P+ F++ VL+AC +LG L
Sbjct: 153 PEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQ 212
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM-PEKDIVSWSSMIQGY 207
KW+H Y+++ G +V + TSL+D+YAKCG++E+A+ +FD + PEKD+++WS+MI +
Sbjct: 213 HGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAF 272
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER--NEFLS 265
+ +G +E L++F M + ++P T V VL AC G + G + + +R NE+
Sbjct: 273 SMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEG---NEYFKRMMNEYGV 329
Query: 266 NPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVK 315
+P++ ++D+Y++ GR+ A V + M + D ++W A+++G ++G V+
Sbjct: 330 SPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVE 382
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/261 (18%), Positives = 103/261 (39%), Gaps = 44/261 (16%)
Query: 193 PEKDIVSWSSMIQGYASN-----GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
P + W+++I+ + FP AL ++ M+ + P+ +T +L S+
Sbjct: 20 PNIESFVWNNLIRASTRSRVQNPAFPP-ALSLYLRMRLHAVLPDLHTFPFLLQ---SINT 75
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
G + + ++P + T+LI+MY+ CG A + F E+ D WNA++
Sbjct: 76 PHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHA 135
Query: 308 LSMNGYVKVAFGVFGQLEK---------------CG-------------------IQPNG 333
+ G + +A +F Q+ + CG ++PN
Sbjct: 136 NAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNE 195
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
T +L C G + G+ + + ++ ++D+ + G ++ A +
Sbjct: 196 FTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTS-LIDMYAKCGSIERAKCIFD 254
Query: 394 SMPMEPNAIVWGALLAGCRLH 414
++ E + + W A++ +H
Sbjct: 255 NLGPEKDVMAWSAMITAFSMH 275
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/605 (36%), Positives = 355/605 (58%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKA 59
+I G N A+ + + G P +T VLKA + L + H +K
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D FV T+L++ Y + +A +F+ + ++V+W A+++GY + + + +F
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G + D F++ V C L ++ K +H Y ++G +++V++ ++D+Y KC
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 565
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+M A+ FD +P D V+W++MI G NG + A +F M+ + P+ +T+ +
Sbjct: 566 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLA 625
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A + L ALE G + + ++P +GT+L+DMYAKCG + A +F+ ++ +
Sbjct: 626 KASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 685
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ GL+ +G K +F Q++ GI+P+ TF+G+L C+H+GLV E + SM
Sbjct: 686 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 745
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + P IEHY C+ D LGR+G + +A LI+SM ME +A ++ LLA CR+ T+
Sbjct: 746 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 805
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ V +L+ LEP +S YVLLSN+Y+A+ KW++ R+MM ++K G SW+EV
Sbjct: 806 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 865
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F+V D S+ +E IY K+ ++ +K G+VP TD L D+EEEEK+ L HSEK
Sbjct: 866 KIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEK 925
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL++T P IR+ KNLRVCGDCH A+K I+K+ REI++RD NRFH F +G CS
Sbjct: 926 LAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICS 985
Query: 600 CKDFW 604
C D+W
Sbjct: 986 CGDYW 990
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 227/441 (51%), Gaps = 10/441 (2%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
TF +L + LG + H + +K GLD V SL+N+Y A VFD++
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD-LSTA 150
+++++SW ++I+G G EA+ +F +LL GLKPD +++ VL A + L + LS +
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 436
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
K +H + + + FV+T+L+D Y++ M++A +F++ D+V+W++M+ GY +
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQS 495
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
+ L +F M ++ + + +T+ V C L A+ G ++ ++ + + +
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
+ ++DMY KCG M+ A F + D V W ++SG NG + AF VF Q+ G+
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFF-NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
P+ T L + +++GRQ N++ + P + +VD+ + G +D+A+
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAY 673
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSA 447
L K + M N W A+L G H + + Q+ + ++P + ++ + + S
Sbjct: 674 CLFKRIEM-MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP-DKVTFIGVLSACSH 731
Query: 448 SHKWNDAAK-IRSMMGDKGIQ 467
S ++A K +RSM GD GI+
Sbjct: 732 SGLVSEAYKHMRSMHGDYGIK 752
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 159/327 (48%), Gaps = 6/327 (1%)
Query: 103 ISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK 162
+S Y++ G + F ++ ++ D + + +L ++ L+ + +H + G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 163 GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
+ V+ SL+++Y K AR VFD M E+D++SW+S+I G A NG EA+ +F
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 223 MQRENLKPEYYTMVGVLSACASLG-ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
+ R LKP+ YTM VL A +SL L L + +S+ + T LID Y++
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR-N 465
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
R + ++ E + D V WNA+++G + + +F + K G + + T +
Sbjct: 466 RCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 342 GCTHAGLVDEGRQFFN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C +++G+Q ++ + L + ++D+ + G + A S+P+ P+
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PD 582
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ W +++GC + + + A HV +Q+
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQM 609
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 158/346 (45%), Gaps = 36/346 (10%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
L+ D LG +H+ I+ + + F+ +L+++Y CG L A +VFD +PD+++
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 97 VSWTAIISGYINEG-----NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
VSW +I++ Y N+++A +FR L + ++ +L C G + ++
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
HGY + G + FVA +LV++Y K G +++ + +F++MP +D+V W+ M++ Y G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 212 FPKEALDMFYNMQRENLKPEYYTM------VGVLSACASLGALELGVWASSFME---RNE 262
F +EA+D+ L P T+ G S + + G ASS E RN+
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNK 285
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
LS Y G+ + K F +M + D V + V L + VKV G
Sbjct: 286 GLSE----------YLHSGQYSALLKCFADMVESD-VECDQVTFILMLATAVKVDSLALG 334
Query: 323 QLEKCGIQPNG--------NTFVGLLCGCTHAGLVDEGRQFFNSMS 360
Q C G N+ + + C G R F++MS
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF---ARTVFDNMS 377
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 54/409 (13%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
Q A + +R + + T +LK C H K GLD DEFV +L
Sbjct: 127 QQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGAL 186
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+N+Y+ G + + +F+++P ++VV W ++ Y+ G EEAI++ GL P+
Sbjct: 187 VNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNE 246
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++ R+L + GD S A + + N GN D
Sbjct: 247 ITL-RLLARIS--GDDSDAGQVKSFAN---------------------GN--------DA 274
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+I+ + + Y +G L F +M +++ + T + +L+ + +L LG
Sbjct: 275 SSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALG 334
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + +LI+MY K + A VF M ++D + WN+V++G++ N
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF----------FNSMSR 361
G A +F QL +CG++P+ T +L A + EG N++S
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVL---KAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F T +I+ Y R+ + EA L + + + W A++AG
Sbjct: 452 SFVSTALIDAY-------SRNRCMKEAEILFERHNFD--LVAWNAMMAG 491
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/590 (36%), Positives = 348/590 (58%), Gaps = 38/590 (6%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYV---HCGYLADALKVFDDIPDKNVVSWTAIISGYINE 109
H+ I L +V T LL L H + +F + N +WTA+I Y
Sbjct: 28 HAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPFAWTALIRAYALR 87
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFV 168
G L +A++ + + R + P SF+ + +AC + + +H + G +++V
Sbjct: 88 GPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDLYV 147
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS--------------------------- 201
+++D+Y KCG++ AR VFD+MPE+D++SW+
Sbjct: 148 NNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVKDM 207
Query: 202 ----SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF 257
+M+ GYA N P +AL++F ++ E ++ + T+VGV+SACA LGA + W
Sbjct: 208 VTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDI 267
Query: 258 MERNEFL--SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
E + F N ++G+ LIDMY+KCG + +A VF+ M++++ +++++ G +++G +
Sbjct: 268 AESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAIHGRAR 327
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A +F + + G++PN TFVG+L C+HAGLVD+G+Q F SM + + + P E Y CM
Sbjct: 328 AAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYACM 387
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNS 435
DLL R+G L++A +L+++MPME + VWGALL +H D+AE +L LEP N
Sbjct: 388 TDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFELEPDNI 447
Query: 436 GNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV-DGVVHEFLVGDNSHPLS 494
GNY+LLSN Y+++ +W+D +K+R ++ +K ++K G SWVE +G++H+F+ GD SHP
Sbjct: 448 GNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIHKFVAGDVSHPKI 507
Query: 495 EKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDV 554
+I +L++L +LK G+ P + + I + EK+ L HSEKLALAFGL++T
Sbjct: 508 NEIKKELNDLLERLKGIGYQPNLSSLPYGINDREKRLLLMAHSEKLALAFGLLSTDVGST 567
Query: 555 IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I+I KNLR+C DCH + SK+TGR+I+VRDN RFH F+ G+CSC +FW
Sbjct: 568 IKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNTRFHHFLNGACSCSNFW 617
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 185/353 (52%), Gaps = 36/353 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHS-LIVKA 59
+IR + A+ FY+SMR P +FTF + ACA LG + H+ ++
Sbjct: 80 LIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLG 139
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE------ 113
G D +V +++++YV CG L A VFD++P+++V+SWT +I Y G++
Sbjct: 140 GFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLF 199
Query: 114 -------------------------EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+A+ +FRRL G++ D ++V V++AC QLG
Sbjct: 200 DGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASK 259
Query: 149 TAKWIHGYVNEA--GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
A WI + G G NV V ++L+D+Y+KCGN+E+A VF M E+++ S+SSMI G
Sbjct: 260 YANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVG 319
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
+A +G + A+ +FY+M +KP + T VGVL+AC+ G ++ G + ME+ ++
Sbjct: 320 FAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAP 379
Query: 267 PV-LGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
L + D+ ++ G + +A ++ M + D VW A++ ++G VA
Sbjct: 380 TAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVA 432
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 152/352 (43%), Gaps = 42/352 (11%)
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM---EKARRV 188
+ +VR+L C+ L + AK +H + ++ +V T L+ L ++ R +
Sbjct: 9 WEVVRILERCSSL---NQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLL 65
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F Q+ + +W+++I+ YA G +AL + +M++ + P +T + SACA++
Sbjct: 66 FSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHS 125
Query: 249 ELGVWA-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD------------ 295
LG + + F S+ + +IDMY KCG + A VF EM +
Sbjct: 126 ALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVA 185
Query: 296 -------------------KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
KD V W A+V+G + N A VF +L G++ + T
Sbjct: 186 YTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTL 245
Query: 337 VGLLCGCTHAGLVDEGRQFFN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
VG++ C G + + S F + + ++D+ + G ++EA+++ K M
Sbjct: 246 VGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGM 305
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
E N + +++ G +H + A + + LE N+V + +A
Sbjct: 306 -RERNVFSYSSMIVGFAIHGRARAAIKLFYDM--LETGVKPNHVTFVGVLTA 354
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/605 (37%), Positives = 345/605 (57%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ +N + AIE + M+N GF P++FTF V+ A D G + H +VK
Sbjct: 212 MITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTS 271
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV + L+ Y + + K+F+++P+ + VS+ II+ Y G ++E+I++F+
Sbjct: 272 FIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQ 331
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L +F +L+ DL + +H V + + V+ SLVD+YAKCG
Sbjct: 332 ELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCG 391
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
E+A R+F ++ + V W++MI G + L +FY M+R N+ + T VL
Sbjct: 392 KFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLK 451
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A+L ++ LG S + R+ F+ N G L+DMYA C + A K F EM +++ V
Sbjct: 452 ASANLASILLGKQLHSCVIRSGFM-NVYSGCALLDMYANCASIKDAIKTFEEMSERNVVT 510
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++S + NG K F ++ G QP+ +F+ +L C+H LV+EG ++FN MS
Sbjct: 511 WNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMS 570
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V++L P EHY MVD L RSG+ DEA +L+ MP EP+ IVW ++L CR+HK LA
Sbjct: 571 GVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALA 630
Query: 421 EHVLNQLIALEPW-NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
QL ++ ++ YV +SNI++ + +W+ K++ M D+G++K+ SWVE+
Sbjct: 631 RKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKH 690
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F D+ HP +I K++ LA +++ G+ P ++++E K L HSE+
Sbjct: 691 KVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSER 750
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AF LI T I + KNLR C DCH AIK+ISKI GREI VRD+NRFH F +GSCS
Sbjct: 751 LAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCS 810
Query: 600 CKDFW 604
C D+W
Sbjct: 811 CGDYW 815
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 206/414 (49%), Gaps = 11/414 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLG---VRSHSLIV 57
MI + ++ F A + + M G P T+ +L C +D ++ ++H+ IV
Sbjct: 111 MIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGC---NDLEVAKELYQAHAQIV 167
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
K G + V +LL+ Y G L A ++F ++ + VS+ +I+GY N G EEAI
Sbjct: 168 KLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIE 227
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+F + + G KP F+ V++A L D + + IHG+V + RNVFV + +D Y+
Sbjct: 228 LFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYS 287
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
K + + R++F++MPE D VS++ +I YA G KE++D+F +Q + +
Sbjct: 288 KHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPT 347
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+LS AS L++G + + + + + +L+DMYAKCG+ +A ++F + +
Sbjct: 348 MLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRS 407
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V W A++S G + +F ++ + + + TF +L + + G+Q +
Sbjct: 408 TVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHS 467
Query: 358 SMSRVFSLTPMIEHYGC-MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ R M + GC ++D+ + +A + + M E N + W ALL+
Sbjct: 468 CVIRS---GFMNVYSGCALLDMYANCASIKDAIKTFEEMS-ERNVVTWNALLSA 517
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 182/394 (46%), Gaps = 22/394 (5%)
Query: 25 GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC----DEFVKTSLLNLYVHCGY 80
GF P F F++K L R + LD + F +++ YV G
Sbjct: 38 GFDPITSRFNFMIK--------DLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGN 89
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
L A ++FDD ++ VV+WT +I Y +A +F + G +PD + + +LT
Sbjct: 90 LTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTG 149
Query: 141 CTQLGDLSTAKWI---HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI 197
C DL AK + H + + G N V +L+D Y K G ++ ARR+F +M D
Sbjct: 150 C---NDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDS 206
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF 257
VS++ MI GYA+NG +EA+++F MQ KP +T V+SA L G F
Sbjct: 207 VSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGF 266
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ + F+ N +G +D Y+K + + K+F EM + D V +N +++ + G VK +
Sbjct: 267 VVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKES 326
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT-PMIEHYGCMV 376
+F +L+ F +L + + GRQ + V S+ P +V
Sbjct: 327 IDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQV--VVSMADPDFRVSNSLV 384
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
D+ + G+ +EA + + + + W A+++
Sbjct: 385 DMYAKCGKFEEADRIFLRLSSR-STVPWTAMISA 417
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 132/279 (47%), Gaps = 11/279 (3%)
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R++ G P + ++ ++ G L A+ + + RN F ++ Y K G
Sbjct: 33 RIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQM----PNRNSFSIDIIISGYVKSG 88
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ ARR+FD E+ +V+W++MI Y+ + +A +F M R +P+Y T + +L+
Sbjct: 89 NLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLT 148
Query: 241 ACASLG-ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
C L A EL + ++ L++ V TL+D Y K G + A ++F EM D V
Sbjct: 149 GCNDLEVAKELYQAHAQIVKLGHHLNHRVCN-TLLDSYFKTGGLDSARRLFLEMCGWDSV 207
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE--GRQFFN 357
+N +++G + NG + A +F +++ G +P+ TF ++ GL D G+Q
Sbjct: 208 SFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASV--GLDDTAFGQQIHG 265
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
+ + S + +D + ++E +L MP
Sbjct: 266 FVVKT-SFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMP 303
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/635 (35%), Positives = 351/635 (55%), Gaps = 31/635 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I G+ + A++ YN+M R+ T T +LK + LG + H ++K
Sbjct: 109 LIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKL 168
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV---------------------- 97
G + V + LL +Y + G ++DA KVF + D+N V
Sbjct: 169 GFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF 228
Query: 98 --------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
SW A+I G G +EAI FR + +GLK D + VL AC LG ++
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
K IH + +++V ++L+D+Y KC + A+ VFD+M +K++VSW++M+ GY
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
G +EA+ +F +MQR + P++YT+ +SACA++ +LE G + + +
Sbjct: 349 TGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTV 408
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
+L+ +Y KCG + + ++F EM +D V W A+VS + G +F ++ + G+
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+P+G T G++ C+ AGLV++G+++F M+ + + P I HY CM+DL RSG+L+EA
Sbjct: 469 KPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAM 528
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
I MP P+AI W LL+ CR ++ + LI L+P + Y LLS+IY++
Sbjct: 529 RFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKG 588
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
KW+ A++R M +K ++K G SW++ G +H F D S P ++IY+KL+EL K+
Sbjct: 589 KWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKII 648
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
G+ P T V D+EE K L HSE+LA+AFGLI IR+ KNLRVC DCH
Sbjct: 649 DNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHN 708
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A K IS +TGREI+VRD RFH F +G+CSC DFW
Sbjct: 709 ATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 189/418 (45%), Gaps = 47/418 (11%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P F + ++ A A R I + L F +LL Y G +++
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL----FSWNNLLLAYSKAGLISEMEST 94
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLKPDSFSIVRVLTACTQLGD 146
F+ +PD++ V+W +I GY G + A+ + ++ +++ +L + G
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK---------------------------- 178
+S K IHG V + G + V + L+ +YA
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 179 ---CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
CG +E A ++F M EKD VSW++MI+G A NG KEA++ F M+ + LK + Y
Sbjct: 215 LLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
VL AC LGA+ G + + R F + +G+ LIDMY KC + A VF MK
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
K+ V W A+V G G + A +F +++ GI P+ T + C + ++EG QF
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 356 FNSMSRVFSLTPMIEHY----GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
++T + HY +V L G+ G +D++ L M + +A+ W A+++
Sbjct: 394 HGK-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVS 445
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 36/298 (12%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
N+F +L+ Y+K G + + F+++P++D V+W+ +I+GY+ +G A+ + M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 225 RE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
R+ + T++ +L +S G + LG + + F S ++G+ L+ MYA G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 284 AQACKVFREMKD------------------------------KDQVVWNAVVSGLSMNGY 313
+ A KVF + D KD V W A++ GL+ NG
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
K A F +++ G++ + F +L C G ++EG+Q + R + I
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGS 309
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
++D+ + L A + M + N + W A++ G + +T AE + + ++
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVG---YGQTGRAEEAVKIFLDMQ 363
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/620 (36%), Positives = 350/620 (56%), Gaps = 39/620 (6%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
+ + M N+GF P T+ VL ACA D + G H+ I++ D L+++
Sbjct: 263 LAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDM 322
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
Y CG L A +VF + + + +SW ++I+G ++ G E+A+ +F ++ + D F +
Sbjct: 323 YAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFIL 382
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA--------- 185
+L C+ ST + +HGY ++G G + V +++ +YAKCG+ +KA
Sbjct: 383 PTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPL 442
Query: 186 ----------------------RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
R FD MPE++IV+W+SM+ Y NGF +E L ++ +M
Sbjct: 443 RNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSM 502
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
+ ++P++ T + ACA L ++LG+ + + N + +++ MY++CG +
Sbjct: 503 RSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLI 562
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
+A F + DKD + WNA+++ + NG F + K +PN ++V +L GC
Sbjct: 563 KEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGC 622
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
+H GLV EG+ +F+SM+RVF ++P EH+ CMVDLLGR+G L++A +LI+ MP +PNA V
Sbjct: 623 SHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATV 682
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGD 463
W ALL CR+H LAE +L+ L+ S YVLLSN+YS S + ++ A +R +M
Sbjct: 683 WSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKV 742
Query: 464 KGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
KGI+ RGCSW+EVD VH F V + SHP +++Y KL+E+ ++ G T + +
Sbjct: 743 KGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITVESSV-- 800
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
K+Y HSEKLA AFGL+ I + KNLRVC DCH IKL+S +T RE+I
Sbjct: 801 --HRSKKY----HSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELI 854
Query: 584 VRDNNRFHCFIEGSCSCKDF 603
+RD RFH F +G CSCKD+
Sbjct: 855 MRDGYRFHHFKDGICSCKDY 874
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 212/478 (44%), Gaps = 72/478 (15%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM---RNEG---FLPTNFTFPFVLKACAREHDFQLGVRSHS 54
MI G+ N + E ++ M N+G + P F+F V+KAC D +L ++ H+
Sbjct: 113 MISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP--FSFTSVMKACGSLGDSRLAIQLHA 170
Query: 55 LIVKAGLDCDEFVKTSLLNLYVHCGY--LAD----------------------------- 83
L+ K G + ++ S++ +YV CG LA+
Sbjct: 171 LVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYK 230
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
AL++F+ +P+++ VSW +IS + G + + MF + ++G P+ + VL+AC
Sbjct: 231 ALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAS 290
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
DL +H + ++ L+D+YAKCG ++ A+RVF + E D +SW+S+
Sbjct: 291 TSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSL 350
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I G G ++AL +F M+R ++ + + + +L C+ G + ++
Sbjct: 351 ITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGM 410
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFR-------------------------------E 292
S+ +G +I MYAKCG +A VFR
Sbjct: 411 GSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDM 470
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M +++ V WN+++S NG+ + ++ + G+QP+ TF + C +V G
Sbjct: 471 MPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLG 530
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
Q ++ F L+ + +V + R G + EA S+ + + I W A+LA
Sbjct: 531 MQVVTHATK-FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSID-DKDLISWNAMLAA 586
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 190/411 (46%), Gaps = 52/411 (12%)
Query: 40 CAREHD-FQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNV 96
C HD FQ+ +H + F +++ V ++DA K+FD++P K+
Sbjct: 56 CGLTHDAFQVFQETHHRNI--------FTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDS 107
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHR----GLKPDSFSIVRVLTACTQLGDLSTAKW 152
VSWT +ISGY G + F ++ G D FS V+ AC LGD A
Sbjct: 108 VSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQ 167
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNME----------------------------- 183
+H V++ G G + S+V +Y KCG+++
Sbjct: 168 LHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYG 227
Query: 184 --KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
KA ++F++MPE+D VSW+++I ++ +GF + L MF M + P + T VLSA
Sbjct: 228 PYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSA 287
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
CAS L+ G + + R E + V G LIDMYAKCG + A +VF+ +++ D + W
Sbjct: 288 CASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISW 347
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF--FNSM 359
N++++G+ G + A +F Q+ + + + +L C+ G +
Sbjct: 348 NSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIK 407
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
S + S P+ ++ + + G D+A + + MP+ N I W A++
Sbjct: 408 SGMGSSAPV---GNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITA 454
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ +V N + ++ Y SMR+ G P TF ++ACA +LG++ + K G
Sbjct: 482 MLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFG 541
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + V S++ +Y CG + +A FD I DK+++SW A+++ + G + I+ F
Sbjct: 542 LSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFE 601
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L KP+ S V VL+ C+ +G ++ K + G + +VDL +
Sbjct: 602 DMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRA 661
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMI 204
G +E+A+ + + MP K + WS+++
Sbjct: 662 GLLEQAKDLIEGMPFKPNATVWSALL 687
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/607 (38%), Positives = 351/607 (57%), Gaps = 40/607 (6%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL-NLYVHCGYLADALKVFDDIPD 93
F+L +C F+ + H+ ++ GL LL L ++ A VFD P
Sbjct: 6 FLLSSCK---SFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQ 62
Query: 94 KNVVSWTAIISGY-INEGNLEEAINMFRRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAK 151
++ + II + + ++ FR L+ L P+ +S C + +
Sbjct: 63 PDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGE 122
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLY-------------------------------AKCG 180
+ + + G N+FV +L+ +Y A+ G
Sbjct: 123 QVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLG 182
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
M++AR++FD+MPEKD+VSW++MI G G+ EALD+F+NM + + P YT+ L+
Sbjct: 183 KMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLA 242
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA+L AL+ G W ++++N N L LIDMYAKCG + A K+F + V
Sbjct: 243 ACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKV 302
Query: 301 W--NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
W NA++ G +++G K A VF Q++ + PN TFV LL C+H V+EGR +F S
Sbjct: 303 WPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFES 362
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M+ + + P +EHYGC+VDLLGR+G+L EA E+I SM + P+ +WGALL+ C++HK +
Sbjct: 363 MASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAE 422
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
+ E V + L+P + G +VLL+NIYS + WN+A +R + + G +K GCS +E++
Sbjct: 423 MGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIELN 482
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE-EEKQYFLACHS 537
G+ H+FLVGD SHP ++++Y LDE+ TKLK AG++P + VL DI++ E+++ L HS
Sbjct: 483 GMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDIDDNEDRETALLKHS 542
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EKLA+AFGL+ T PK IRI KNLRVC DCH AIK ISK+ REIIVRD R+H F +G+
Sbjct: 543 EKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDREIIVRDRIRYHHFKDGT 602
Query: 598 CSCKDFW 604
CSC D+W
Sbjct: 603 CSCNDYW 609
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 168/330 (50%), Gaps = 41/330 (12%)
Query: 16 EFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLG--VRSHSLIVKAGLDCDEFVKTSLLN 73
+F + +R E +P ++F F K C G VR H+ +K GL+ + FV +L+
Sbjct: 88 KFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHA--IKLGLENNLFVTNALIG 145
Query: 74 LYVHCGYLADALKVFD-------------------------------DIPDKNVVSWTAI 102
+YV+ ++ DA KVFD ++P+K+VVSWT +
Sbjct: 146 MYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTM 205
Query: 103 ISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK 162
ISG + G EA+++F +L +G+ P+ +++ L AC L L +W+H Y+ +
Sbjct: 206 ISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNI 265
Query: 163 GRNVFVATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYASNGFPKEALDMF 220
N + L+D+YAKCG +E A ++F+ P ++ + W++MI G+A +G KEA+++F
Sbjct: 266 QMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVF 325
Query: 221 YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYA 278
M+ E + P T V +L+AC+ +E G + M + + P L L+D+
Sbjct: 326 EQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMA-SHYRVKPELEHYGCLVDLLG 384
Query: 279 KCGRMAQACKVFREMK-DKDQVVWNAVVSG 307
+ GR+ +A ++ M D +W A++S
Sbjct: 385 RAGRLKEAEEIISSMHLTPDVAIWGALLSA 414
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + F A++ +++M +G P +T L ACA G H I K
Sbjct: 205 MISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNN 264
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINM 118
+ +E + L+++Y CG L A K+F+ P + V W A+I G+ G +EAI +
Sbjct: 265 IQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEV 324
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS------- 171
F ++ + P+ + V +L AC+ HG N +GR F + +
Sbjct: 325 FEQMKIEKVSPNKVTFVALLNACS-----------HG--NRVEEGRYYFESMASHYRVKP 371
Query: 172 -------LVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMIQG 206
LVDL + G +++A + M D+ W +++
Sbjct: 372 ELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSA 414
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/611 (37%), Positives = 345/611 (56%), Gaps = 65/611 (10%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQL-GVRSHSLIVKAGL-DCDEFVKTSLLNL 74
+ MR P FTF F+ K + L H+ ++ L FV SL+++
Sbjct: 93 LFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHM 152
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL---------------------- 112
Y G D + FD+IP K+ VSWT +ISG G L
Sbjct: 153 YTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLI 212
Query: 113 ---------EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG 163
+EA++ F+ +L G+ PD +++ VL+AC+QL DL +H V E G
Sbjct: 213 AAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMS 272
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFD--------------------------------Q 191
+ + +L+D+YAKCG+ AR VFD Q
Sbjct: 273 MSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQ 332
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M +DI++++SMI GY +G +EAL +F NM+R +L+ + +T+V +LSACASLGAL G
Sbjct: 333 MEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQG 392
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ +E ++ +GT L+DMY KCGR+ +A VF+ M +D W A+++GL+ N
Sbjct: 393 RALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFN 452
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G K F Q+ G QPN +++ +L C+H+ L++EGR +F+ M ++++ P IEH
Sbjct: 453 GMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEH 512
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
YGCM+DLLGRSG LDEA +L+K+MPM+PN+++W ++L+ CR+HK+ DLA+ L+ +E
Sbjct: 513 YGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIE 572
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P YV L NI S KW DA+KIR +M ++ ++K G S V V G VH+F+V D SH
Sbjct: 573 PDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSH 632
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P +I + L+E++ +LK+AG+ P T V D++EEEK+ L HSEKLA+AFGL++ AP
Sbjct: 633 PRILEIIAMLEEISHRLKSAGYSPITSQVTVDVDEEEKEQTLLAHSEKLAIAFGLVSLAP 692
Query: 552 KDVIRIAKNLR 562
+ I KNLR
Sbjct: 693 NLPVHIIKNLR 703
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 239/485 (49%), Gaps = 12/485 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHD-FQLGVRSHSLIVKA 59
++RG + + I + MR + ++ + +K C + + + G + H +++KA
Sbjct: 865 VLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKA 924
Query: 60 G-LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
G + + F+ SL++LY G D +K +DI ++V+SW +I+S Y + G+++EA+
Sbjct: 925 GWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYY 984
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-KGRNVFVATSLVDLYA 177
+++L G P S V +L + GD IHG V++ G +V V T+L+D+Y
Sbjct: 985 LKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYG 1044
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KC + + +F+++P + +S+I AL++ + M E + P+ T
Sbjct: 1045 KCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSA 1104
Query: 238 V-----LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
LSA SL + ++ S + + F + + ++LI YA G+++ + +F
Sbjct: 1105 TMKAISLSASPSLTSCQM---LHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEG 1161
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
+ D + + + A++S + G A +F Q+ G++P+ TF+ + GC AG+ +EG
Sbjct: 1162 LLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEG 1221
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
R M L P H+ CMV+LL R G + EA E+++ P+ W +LL C+
Sbjct: 1222 RLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCK 1281
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
H + L + N LI + + + +SN ++ A +I+ M K ++K G
Sbjct: 1282 AHGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKK-SGH 1340
Query: 473 SWVEV 477
S +EV
Sbjct: 1341 SLIEV 1345
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 185/369 (50%), Gaps = 42/369 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + D + A++ + +M +EG P + T VL AC++ D +LG HSL+ + G
Sbjct: 211 LIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKG 270
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDI-----PD---------------------- 93
+ E + +L+++Y CG A +VFD + P
Sbjct: 271 MSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLF 330
Query: 94 -----KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
++++++ ++I+GYI+ G L EA+ +F + L+ D+F++V +L+AC LG L
Sbjct: 331 DQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALP 390
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+ +H + ++++ T+L+D+Y KCG + +A VF +M ++D+ +W++MI G A
Sbjct: 391 QGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLA 450
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN-- 266
NG K L+ FY M+ + +P + + VL+AC+ L G + + L N
Sbjct: 451 FNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRL---YFDEMRILYNIH 507
Query: 267 PVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
P + +ID+ + G + +A + + M + V+W +++S ++ + +A
Sbjct: 508 PQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEH 567
Query: 324 LEKCGIQPN 332
L K I+P+
Sbjct: 568 LLK--IEPD 574
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 200/452 (44%), Gaps = 35/452 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF+ + A Y M G T TF +L C+ QL H ++ G
Sbjct: 768 MITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQL----HGRVLALG 823
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L C+ FV ++L+N Y+H +L +F ++P +N ++ G N EE I F
Sbjct: 824 LCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFL 883
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGD-LSTAKWIHGYVNEAG-KGRNVFVATSLVDLYAK 178
+ + L+ + S + C Q G+ L + +HG V +AG N+F++ SLVDLY+
Sbjct: 884 DMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSA 943
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G+ + + + +D++SW+S++ YA G KEA+ M P + V +
Sbjct: 944 IGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSL 1003
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDKD 297
L+ G +LGV + + F + V + TTLIDMY KC + +F E+
Sbjct: 1004 LALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIA 1063
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL-------------CGCT 344
N++++ A + + G+ P+ TF + C
Sbjct: 1064 LECCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQML 1123
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
H+ LV G F M+ SL I Y C +GQL +H + + + ++PN I +
Sbjct: 1124 HSCLVKLG--FEMDMAVCSSL---ITAYAC-------AGQLSSSHLIFEGL-LDPNVICF 1170
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIA--LEPWN 434
A+++ C + A + +Q+++ L+P N
Sbjct: 1171 TAIISACARYGDGARAMELFDQMVSSGLKPDN 1202
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/556 (40%), Positives = 340/556 (61%), Gaps = 4/556 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ ++K+ D F+ L++ Y+ G DA +FD++P K+ VSW +++SG G L
Sbjct: 68 HAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQL 127
Query: 113 EEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
E +++F ++ LK + F+ + V++AC ++H + G V V +
Sbjct: 128 GECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNA 187
Query: 172 LVDLYAKCGNMEKARRVFDQMPE--KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
LV++Y K G +E A R+F +MPE K IVSW+S++ A NG P EA + F M+
Sbjct: 188 LVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFF 247
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P+ TMV +L AC + + + N + TTL+++Y+K GR+ + KV
Sbjct: 248 PDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKV 307
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGL 348
F E+ D+V W A+++G +M+G K A F ++ + G++P+ TF LL C+H+GL
Sbjct: 308 FEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGL 367
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
V EG+ FF MS V+ + P ++HY CMVDLLGR G LD+AHELIK+MP EPN+ VWGALL
Sbjct: 368 VKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALL 427
Query: 409 AGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQK 468
CR+H+ DL + LIAL+P + NY++LSN+YSA+ WNDA+K+R++M +K + +
Sbjct: 428 GACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKNKVLTR 487
Query: 469 IRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEE 528
+GCS++E +H F+V D +HP S +I+ KL+E+ K++ GFV T+ +L D++EE
Sbjct: 488 NQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKKIQDVGFVHETESILHDVDEEV 547
Query: 529 KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNN 588
K + HSEK+ALA+GL+ T + I KNLR+C DCH +K +S + R II+RD
Sbjct: 548 KIDMITKHSEKIALAYGLLVTNADMPLVIIKNLRICRDCHNTVKFVSMVEKRTIIIRDTK 607
Query: 589 RFHCFIEGSCSCKDFW 604
RFH F G CSC D+W
Sbjct: 608 RFHQFSGGLCSCGDYW 623
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 161/300 (53%), Gaps = 8/300 (2%)
Query: 15 IEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
+ + M+++ L N FTF V+ AC E G H +K GL + V +L+N
Sbjct: 131 LSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVN 190
Query: 74 LYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+Y G++ A ++F ++P +K++VSW +I++ G EA N F + G PD
Sbjct: 191 MYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDD 250
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++V +L AC + +HG + G N+ + T+L++LY+K G + +R+VF++
Sbjct: 251 ATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEE 310
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALEL 250
+ + D V+W++M+ GYA +G KEA++ F + RE ++P++ T +LSAC+ G ++
Sbjct: 311 ISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKE 370
Query: 251 GVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSG 307
G + M + + P L + ++D+ +CG + A ++ + M + + VW A++
Sbjct: 371 GKYFFRVMS-DVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGA 429
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 139/273 (50%), Gaps = 9/273 (3%)
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
+S + IH +V ++ R+ F+ LV Y K G + A +FD+MP+KD VSW+S++ G
Sbjct: 61 VSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSG 120
Query: 207 YASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
A G E L +F M+ ++ LK +T + V+SAC S A + G + + +
Sbjct: 121 LAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVY 180
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ--VVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ L++MY K G + A ++F EM + ++ V WN++V+ + NG AF F
Sbjct: 181 EVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDM 240
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS--LTPMIEHYGCMVDLLGR 381
+ G P+ T V LL C + L GR +F+ L + +++L +
Sbjct: 241 MRVNGFFPDDATMVSLLQACENFPL---GRMVEVLHGVIFTCGLDENLTIVTTLLNLYSK 297
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
G+L+ + ++ + + +P+ + W A+LAG +H
Sbjct: 298 LGRLNNSRKVFEEIS-KPDKVAWTAMLAGYAMH 329
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/604 (38%), Positives = 351/604 (58%), Gaps = 15/604 (2%)
Query: 10 CFQHAIEFYNSMRNEGFLPTNFT---FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEF 66
C H + NS L F + +LK C +F+ + H+ I+K GL D F
Sbjct: 8 CQSHLLSLPNSPPQSSELNAKFNEQGWLSLLKRCKSMEEFK---QVHAHILKLGLFYDSF 64
Query: 67 VKTSLLNLYVHC-----GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ NL C G + A +F I + + +I G +N +LEEA+ ++
Sbjct: 65 CGS---NLVASCALSRWGSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVE 121
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+L RG++PD+F+ VL AC+ L L IH +V +AG +VFV L+ +Y KCG
Sbjct: 122 MLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISMYGKCGA 181
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL-KPEYYTMVGVLS 240
+E A VF+QM EK + SWSS+I +AS E L + +M E + E +V LS
Sbjct: 182 IEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALS 241
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC LG+ LG + RN N V+ T+LIDMY KCG + + VF+ M K++
Sbjct: 242 ACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYS 301
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
+ +++GL+++G + A VF + + G+ P+ +VG+L C+HAGLV+EG Q FN M
Sbjct: 302 YTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVNEGLQCFNRMQ 361
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P I+HYGCMVDL+GR+G L EA++LIKSMP++PN +VW +LL+ C++H ++
Sbjct: 362 FEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIG 421
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + L N G+Y++L+N+Y+ + KW + A+IR+ M +K + + G S VE +
Sbjct: 422 EIAAENIFRLNKHNPGDYLVLANMYARAKKWANVARIRTEMAEKHLVQTPGFSLVEANRN 481
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
V++F+ D S P+ E IY + ++ +LK G+ P VL D++E+EK+ L HS+KL
Sbjct: 482 VYKFVSQDKSQPICETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKL 541
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF LI T+ IRI++NLR+C DCH K IS I REI VRD NRFH F +G+CSC
Sbjct: 542 AIAFALIQTSEGSPIRISRNLRMCNDCHTYTKFISVIYEREITVRDRNRFHHFKDGTCSC 601
Query: 601 KDFW 604
KD+W
Sbjct: 602 KDYW 605
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 171/311 (54%), Gaps = 5/311 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG V++ + A+ Y M G P NFT+PFVLKAC+ + GV+ H+ + KAG
Sbjct: 102 MIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAG 161
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+ L+++Y CG + A VF+ + +K+V SW++II + + E + +
Sbjct: 162 LEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLG 221
Query: 121 RLLHRGLKPDSFSI-VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G SI V L+ACT LG + + IHG + NV V TSL+D+Y KC
Sbjct: 222 DMSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKC 281
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++EK VF M K+ S++ MI G A +G +EA+ +F +M E L P+ VGVL
Sbjct: 282 GSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDVVYVGVL 341
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK- 296
SAC+ G + G+ + M+ E + P + ++D+ + G + +A + + M K
Sbjct: 342 SACSHAGLVNEGLQCFNRMQF-EHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKP 400
Query: 297 DQVVWNAVVSG 307
+ VVW +++S
Sbjct: 401 NDVVWRSLLSA 411
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/636 (36%), Positives = 356/636 (55%), Gaps = 43/636 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + A+ M +G + T+ L ACAR G + H+ ++++
Sbjct: 231 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 290
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++L+ LY CG +A +VF+ + D+N VSWT +I G + +++ +F
Sbjct: 291 PQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFN 350
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + D F++ +++ C DL + +H ++G R + V+ SL+ LYAKCG
Sbjct: 351 QMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCG 410
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYAS------------------------------- 209
+++ A VF M E+DIVSW+SMI Y+
Sbjct: 411 DLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQ 470
Query: 210 NGFPKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+G ++ L M+ M ++++ P++ T V + CA +GA +LG + + N
Sbjct: 471 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVS 530
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ I MY+KCGR+++A K+F + KD V WNA+++G S +G K A F + G
Sbjct: 531 VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKG 590
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
+P+ ++V +L GC+H+GLV EG+ +F+ M+RV ++P +EH+ CMVDLLGR+G L EA
Sbjct: 591 AKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEA 650
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
+LI MPM+P A VWGALL+ C++H +LAE + L+ +SG+Y+LL+ IYS +
Sbjct: 651 KDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDA 710
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
K +D+A++R +M DKGI+K G SW+EV+ VH F D SHP I +K+DEL K+
Sbjct: 711 GKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKI 770
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
G+V T E + HSEKLA+AFG+++ I I KNLR+CGDCH
Sbjct: 771 AHLGYVRT--------ESPRSEIH---HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCH 819
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IKLIS +T RE ++RD RFH F GSCSC D+W
Sbjct: 820 TVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 183/396 (46%), Gaps = 34/396 (8%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F + S+L Y + A++ F+D+ +++VVSW +I+ G + EA+ + + +
Sbjct: 195 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 254
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G++ DS + LTAC +L L K +H V + + +VA++L++LYAKCG+ ++A
Sbjct: 255 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 314
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+RVF+ + +++ VSW+ +I G +++++F M+ E + + + + ++S C +
Sbjct: 315 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNR 374
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
L LG S ++ V+ +LI +YAKCG + A VF M ++D V W +++
Sbjct: 375 MDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMI 434
Query: 306 SGLSMNGYVKVA------------------FGVFGQ--------------LEKCGIQPNG 333
+ S G + A G + Q L + + P+
Sbjct: 435 TAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDW 494
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
T+V L GC G G Q + L + + + + G++ EA +L
Sbjct: 495 VTYVTLFRGCADIGANKLGDQIIGHTVKA-GLILNVSVANAAITMYSKCGRISEAQKLFD 553
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+ + + + W A++ G H A + +++
Sbjct: 554 LLNGK-DVVSWNAMITGYSQHGMGKQAAKTFDDMLS 588
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 183/412 (44%), Gaps = 40/412 (9%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFD-DIPDKN 95
L++C H +V GL F++ +LL+ Y+ CG L+DA ++ DI + N
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRG------LKPDSFSIVRVLTACTQLGDLST 149
V++ +++GY +G+L +A +F R+ R L D+ +C LG
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ------------------ 191
A + G + + V T+LVD++ +CG ++ A R+F Q
Sbjct: 147 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAK 206
Query: 192 -------------MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
M E+D+VSW+ MI + +G +EAL + M R+ ++ + T
Sbjct: 207 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 266
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L+ACA L +L G + + R+ +P + + LI++YAKCG +A +VF ++D++
Sbjct: 267 LTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNS 326
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W ++ G + +F Q+ + + L+ GC + + GRQ +S
Sbjct: 327 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ-LHS 385
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ I ++ L + G L A + SM E + + W +++
Sbjct: 386 LCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS-ERDIVSWTSMITA 436
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 148/337 (43%), Gaps = 44/337 (13%)
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD-Q 191
++ L +C G L+ A+ +HG + G VF+ +L+ Y CG + ARR+
Sbjct: 22 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN------LKPEYYTMVGVLSACASL 245
+ E ++++ + M+ GYA G +A ++F M R + L + G +C +L
Sbjct: 82 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR----------------------- 282
G EL + +F +P + T L+DM+ +CG
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 201
Query: 283 --------MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+ A + F +M ++D V WN +++ LS +G V+ A G+ ++ + G++ +
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 261
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY--GCMVDLLGRSGQLDEAHELI 392
T+ L C + G+Q ++V P I+ Y +++L + G EA +
Sbjct: 262 TYTSSLTACARLFSLGWGKQLH---AKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVF 318
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
S+ + N++ W L+ G ++ + + NQ+ A
Sbjct: 319 NSL-QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 354
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/636 (36%), Positives = 356/636 (55%), Gaps = 43/636 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + + A+ M +G + T+ L ACAR G + H+ ++++
Sbjct: 241 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 300
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++L+ LY CG +A +VF+ + D+N VSWT +I G + +++ +F
Sbjct: 301 PQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFN 360
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + D F++ +++ C DL + +H ++G R + V+ SL+ LYAKCG
Sbjct: 361 QMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCG 420
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYAS------------------------------- 209
+++ A VF M E+DIVSW+SMI Y+
Sbjct: 421 DLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQ 480
Query: 210 NGFPKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+G ++ L M+ M ++++ P++ T V + CA +GA +LG + + N
Sbjct: 481 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVS 540
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ I MY+KCGR+++A K+F + KD V WNA+++G S +G K A F + G
Sbjct: 541 VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKG 600
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
+P+ ++V +L GC+H+GLV EG+ +F+ M+RV ++P +EH+ CMVDLLGR+G L EA
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEA 660
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
+LI MPM+P A VWGALL+ C++H +LAE + L+ +SG+Y+LL+ IYS +
Sbjct: 661 KDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDA 720
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
K +D+A++R +M DKGI+K G SW+EV+ VH F D SHP I +K+DEL K+
Sbjct: 721 GKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKI 780
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
G+V T E + HSEKLA+AFG+++ I I KNLR+CGDCH
Sbjct: 781 AHLGYVRT--------ESPRSEIH---HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCH 829
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IKLIS +T RE ++RD RFH F GSCSC D+W
Sbjct: 830 TVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 217/493 (44%), Gaps = 66/493 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ F +E + SM G LP FTF V+K+C +L + L K
Sbjct: 108 LMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKF 167
Query: 60 GLDCDEFVKTSLLNLYVHCGY-------------------------------LADALKVF 88
D V+T+L++++V CGY + A++ F
Sbjct: 168 DFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYF 227
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+D+ +++VVSW +I+ G + EA+ + + +G++ DS + LTAC +L L
Sbjct: 228 EDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLG 287
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K +H V + + +VA++L++LYAKCG+ ++A+RVF+ + +++ VSW+ +I G
Sbjct: 288 WGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSL 347
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
+++++F M+ E + + + + ++S C + L LG S ++ V
Sbjct: 348 QYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIV 407
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA----------- 317
+ +LI +YAKCG + A VF M ++D V W ++++ S G + A
Sbjct: 408 VSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRN 467
Query: 318 -------FGVFGQ--------------LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
G + Q L + + P+ T+V L GC G G Q
Sbjct: 468 AITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQII 527
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+ L + + + + G++ EA +L + + + + W A++ G H
Sbjct: 528 GHTVKA-GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK-DVVSWNAMITGYSQHGM 585
Query: 417 TDLAEHVLNQLIA 429
A + +++
Sbjct: 586 GKQAAKTFDDMLS 598
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 190/438 (43%), Gaps = 66/438 (15%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFD-DIPDKN 95
L++C H +V GL F++ +LL+ Y+ CG L+DA ++ DI + N
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHR--------------------GLK------- 128
V++ +++GY +G+L +A +F R+ R GL+
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 129 -----PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
P++F+ V+ +C LG A + G + + V T+LVD++ +CG ++
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190
Query: 184 KARRVFDQ-------------------------------MPEKDIVSWSSMIQGYASNGF 212
A R+F Q M E+D+VSW+ MI + +G
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGR 250
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+EAL + M R+ ++ + T L+ACA L +L G + + R+ +P + +
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 310
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
LI++YAKCG +A +VF ++D++ V W ++ G + +F Q+ + +
Sbjct: 311 LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAID 370
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
L+ GC + + GRQ +S+ I ++ L + G L A +
Sbjct: 371 QFALATLISGCFNRMDLCLGRQ-LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF 429
Query: 393 KSMPMEPNAIVWGALLAG 410
SM E + + W +++
Sbjct: 430 SSMS-ERDIVSWTSMITA 446
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 159/356 (44%), Gaps = 41/356 (11%)
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
+ G L A + RL+ GL F +L A G LS A+ + + K NV
Sbjct: 16 SRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRL---LRADIKEPNVI 72
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE- 226
+++ YAK G++ A +FD+MP +D+ SW++++ GY + L+ F +M R
Sbjct: 73 THNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSG 132
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR---- 282
+ P +T V+ +C +LG EL + +F +P + T L+DM+ +CG
Sbjct: 133 DSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFA 192
Query: 283 ---------------------------MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
+ A + F +M ++D V WN +++ LS +G V+
Sbjct: 193 SRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVR 252
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY--G 373
A G+ ++ + G++ + T+ L C + G+Q ++V P I+ Y
Sbjct: 253 EALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLH---AKVIRSLPQIDPYVAS 309
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+++L + G EA + S+ + N++ W L+ G ++ + + NQ+ A
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/555 (40%), Positives = 335/555 (60%), Gaps = 1/555 (0%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
++H+ +V G + T LL L G +A ++F + D + + ++I N G
Sbjct: 28 QAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNFG 87
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+A+ +RR+LH + P +++ V+ AC L L +H +V +G N FV
Sbjct: 88 FSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQA 147
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+LV YAK AR+VFD+MP++ I++W+SMI GY NG EA+++F M+ +P
Sbjct: 148 ALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEP 207
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ T V VLSAC+ LG+L+LG W + N VL T+L++M+++CG + +A VF
Sbjct: 208 DSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVF 267
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M + + V W A++SG M+GY A VF +++ CG+ PN T+V +L C HAGL++
Sbjct: 268 DSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLIN 327
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP-NAIVWGALLA 409
EGR F SM + + + P +EH+ CMVD+ GR G L+EA++ ++ + E VW A+L
Sbjct: 328 EGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLG 387
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKI 469
C++HK DL V LI+ EP N G+YVLLSN+Y+ + + + +R++M +G++K
Sbjct: 388 ACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQ 447
Query: 470 RGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEK 529
G S ++V+ + F +GD SHP + +IY LDEL + K AG+ P + + ++EEEE+
Sbjct: 448 VGYSTIDVENRSYLFSMGDKSHPETNEIYCYLDELMWRCKDAGYAPAPESAMHELEEEER 507
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+Y L HSEKLA+AFGL+ T +RI KNLR+C DCH AIK IS + REIIVRD R
Sbjct: 508 EYALRYHSEKLAVAFGLMKTCHGVTLRIVKNLRICEDCHSAIKFISVVMNREIIVRDKLR 567
Query: 590 FHCFIEGSCSCKDFW 604
FH F EGSCSC D+W
Sbjct: 568 FHHFREGSCSCSDYW 582
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 175/302 (57%), Gaps = 5/302 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ FY M + +P+ +TF V+KACA +LG HS + +G + FV+ +L+
Sbjct: 92 AVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVT 151
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
Y A KVFD++P +++++W ++ISGY G EA+ +F ++ G +PDS +
Sbjct: 152 FYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSAT 211
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
V VL+AC+QLG L W+H + G NV +ATSLV+++++CG++ +AR VFD M
Sbjct: 212 FVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMN 271
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
E ++VSW++MI GY +G+ EA+++F+ M+ + P T V VLSACA G + G
Sbjct: 272 EGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRL 331
Query: 254 ASSFMERNEFLSNPVL--GTTLIDMYAKCGRMAQACKVFREMKDKDQV--VWNAVVSGLS 309
+ M + E+ P + ++DM+ + G + +A + R + ++ V VW A++
Sbjct: 332 VFASM-KQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACK 390
Query: 310 MN 311
M+
Sbjct: 391 MH 392
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N A+E +N MR G P + TF VL AC++ LG H IV G
Sbjct: 180 MISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTG 239
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + + TSL+N++ CG + A VFD + + NVVSWTA+ISGY G EA+ +F
Sbjct: 240 IRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFH 299
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+ P+ + V VL+AC G +NE GR VF +
Sbjct: 300 RMKACGVVPNRVTYVAVLSACAHA----------GLINE---GRLVFASM---------- 336
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ + +P + M+ + G EA + E L P +T +L
Sbjct: 337 -----KQEYGVVP--GVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWT--AMLG 387
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
AC +LGV + + E NP L +MYA GRM
Sbjct: 388 ACKMHKNFDLGVEVAENLISAE-PENPGHYVLLSNMYALAGRM 429
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/586 (37%), Positives = 337/586 (57%), Gaps = 1/586 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + + AI + MR G P++FTF VLKA HDF LG + H L V G
Sbjct: 215 LITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTG 274
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V +L+ Y + + +F+++P+ + VS+ +IS Y EE++N+FR
Sbjct: 275 FSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFR 334
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G +F +L+ L L + +H A + V SLVD+YAKC
Sbjct: 335 EMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCE 394
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++A +F + ++ VSW+++I GY G L +F M+ NL+ + T VL
Sbjct: 395 MFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLK 454
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A +L LG +F+ R+ L N G+ L+DMYAKCG + A +VF EM D++ V
Sbjct: 455 ASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 514
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++S + NG + A G F ++ + G+QP+ + +G+L C+H G V++G +FF +MS
Sbjct: 515 WNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMS 574
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++ +TP +HY CM+DLLGR+G+ EA +L+ MP EP+ I+W ++L CR++K LA
Sbjct: 575 PIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLA 634
Query: 421 EHVLNQLIALEPW-NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E QL ++E ++ YV +SNIY+A+ KW + ++ M ++GI+K+ SWVEV+
Sbjct: 635 ERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNH 694
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F D +HP ++I K++EL T+++ G+ P T V+ DI+E+ K L HSE+
Sbjct: 695 KIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSER 754
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVR 585
LA+AF LI+T I + KNLR C DCH AIKLISKI R I +
Sbjct: 755 LAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVITTQ 800
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 197/410 (48%), Gaps = 8/410 (1%)
Query: 5 FVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCD 64
+ N+ F A + + M LP TF +L C + H+ VK G D +
Sbjct: 116 YAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN 175
Query: 65 EFVKTS--LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL 122
F+ LL Y L A +F++I DK+ V++ +I+GY +G EAI++F ++
Sbjct: 176 LFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKM 235
Query: 123 LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
G KP F+ VL A L D + + +HG G R+ V ++ Y+K +
Sbjct: 236 RQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRV 295
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
+ R +F++MPE D VS++ +I Y+ +E+L++F MQ + +LS
Sbjct: 296 LETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIA 355
Query: 243 ASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A+L +L++G V + + + + + +G +L+DMYAKC +A +F+ + + V
Sbjct: 356 ANLSSLQVGRQVHCQAIVATADSILH--VGNSLVDMYAKCEMFDEAELIFKSLSQRSTVS 413
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++SG G +F ++ ++ + +TF +L + G+Q +
Sbjct: 414 WTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFII 473
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
R +L + G +VD+ + G + +A ++ + MP + NA+ W AL++
Sbjct: 474 RSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 521
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 162/344 (47%), Gaps = 6/344 (1%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
++++ YV G L+ A +FD +PD+ VV+WT ++ Y + +EA +FR++ P
Sbjct: 80 TMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLP 139
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF--VATSLVDLYAKCGNMEKARR 187
D + +L C + +H + + G N+F V L+ Y + ++ A
Sbjct: 140 DYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACV 199
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
+F+++ +KD V+++++I GY +G EA+ +F M++ KP +T GVL A L
Sbjct: 200 LFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHD 259
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
LG F + +G ++ Y+K R+ + +F EM + D V +N V+S
Sbjct: 260 FALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISS 319
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
S + + +F +++ G F +L + + GRQ + +
Sbjct: 320 YSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQV--HCQAIVATAD 377
Query: 368 MIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
I H G +VD+ + DEA + KS+ + + + W AL++G
Sbjct: 378 SILHVGNSLVDMYAKCEMFDEAELIFKSLS-QRSTVSWTALISG 420
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 2/179 (1%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
+N +++ Y K G++ AR +FD MP++ +V+W+ ++ YA N EA +F M
Sbjct: 73 KNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQM 132
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCG 281
R P+Y T +L C +F + F +N L L+ Y +
Sbjct: 133 CRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVR 192
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
R+ AC +F E+ DKD V +N +++G +G A +F ++ + G +P+ TF G+L
Sbjct: 193 RLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVL 251
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/568 (38%), Positives = 341/568 (60%), Gaps = 43/568 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ GF +D F+ ++E++ M E FL ++F L ACA D +G + H+L+ K+
Sbjct: 118 MVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSR 177
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D ++ ++L+++Y CG +A A +VF + ++N+V+W ++I+ Y G EA+ +F
Sbjct: 178 YSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFV 237
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV-ATSLVDLYAKC 179
R++ GL+PD ++ V++AC L L IH V + K R+ V +LVD+YAKC
Sbjct: 238 RMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKC 297
Query: 180 GNMEKARRVFD-------------------------------QMPEKDIVSWSSMIQGYA 208
+ +ARRVFD +M ++++VSW+++I GY
Sbjct: 298 SKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYT 357
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL---- 264
NG +EAL +F ++RE++ P +YT +LSACA+L L LG A + + + F
Sbjct: 358 QNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSG 417
Query: 265 --SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
S+ +G +LIDMY KCG + +VF +MK++D V WNA++ G + NGY A +F
Sbjct: 418 AESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFR 477
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
++ CG +P+ T +G+LC C+HAGLV+EGR +F SM L P+ +HY CMVDLLGR+
Sbjct: 478 KMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRA 536
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLS 442
G L+EA LI++MP+ P+A+VWG+LLA C++H ++ +H +L+ ++PWNSG YVLLS
Sbjct: 537 GCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLS 596
Query: 443 NIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLD 502
N+Y+ +W D ++R +M +G+ K GCSW+EV+ VH FLV D SHP ++IYS L
Sbjct: 597 NMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLK 656
Query: 503 ELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
L ++K G++P + D E ++Q
Sbjct: 657 MLTEQMKRVGYIPDAN----DFEAYDEQ 680
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 212/453 (46%), Gaps = 69/453 (15%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADAL 85
+LP + F +L +C R + H+ I+ + F++ L+++Y C L DA
Sbjct: 11 YLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDAR 70
Query: 86 KVFDDIPDKNVV-------------------------------SWTAIISGYINEGNLEE 114
K+FD +P +N SW +++SG+ EE
Sbjct: 71 KLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEE 130
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
++ F ++ + +S L+AC L DL+ +H V+++ +V++ ++L+D
Sbjct: 131 SLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALID 190
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+Y+KCG++ A VF M E+++V+W+S+I Y NG EAL++F M L+P+ T
Sbjct: 191 MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250
Query: 235 MVGVLSACASLGALELGVWA-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV---- 289
+ V+SACASL AL+ G+ + ++ N+F + VLG L+DMYAKC ++ +A +V
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Query: 290 ---------------------------FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
F +M ++ V WNA+++G + NG + A +F
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFR 370
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS-MSRVFSLTPMIEHY----GCMVD 377
L++ I P TF LL C + + GRQ + + F E ++D
Sbjct: 371 LLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLID 430
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + G +++ + + M E + + W A++ G
Sbjct: 431 MYMKCGSIEDGSRVFEKMK-ERDCVSWNAIIVG 462
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/589 (37%), Positives = 351/589 (59%), Gaps = 1/589 (0%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
F N + + P + F VL CA + G + H ++K+GL ++VK +L+++Y
Sbjct: 115 FRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYS 174
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVR 136
C ++ A+++ D +P +V S+ +I+S + G EA + +R++ + DS + V
Sbjct: 175 RCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVS 234
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
VL C Q+ DL IH + + G +VFV+++L+D Y KCG + AR+ FD + +++
Sbjct: 235 VLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRN 294
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASS 256
+V+W++++ Y NG +E L++F M+ E+ +P +T +L+ACASL AL G
Sbjct: 295 VVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHG 354
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
+ + F ++ ++G LI+MY+K G + + VF M ++D + WNA++ G S +G K
Sbjct: 355 RIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQ 414
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
A VF + G PN TF+G+L C H LV EG +F+ + + F + P +EHY CMV
Sbjct: 415 ALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMV 474
Query: 377 DLLGRSGQLDEAHELIKSMP-MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNS 435
LLGR+G LDEA +K+ ++ + + W LL C +H+ +L + + +I ++P +
Sbjct: 475 ALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDV 534
Query: 436 GNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSE 495
G Y LLSN+++ + KW+ KIR +M ++ I+K G SW+++ H F+ ++HP S
Sbjct: 535 GTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPEST 594
Query: 496 KIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVI 555
+I+ K+ +L +K G+ P VL D+E+E+K+ +L+ HSEKLALA+GL+ P I
Sbjct: 595 QIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPI 654
Query: 556 RIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
RI KNLR+C DCH A+KLISK T R IIVRD NRFH F EG C+C D W
Sbjct: 655 RIIKNLRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 169/305 (55%), Gaps = 4/305 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ V + C A + M +E + + T+ VL CA+ D QLG++ H+ ++K G
Sbjct: 200 ILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTG 259
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D FV ++L++ Y CG + +A K FD + D+NVV+WTA+++ Y+ G+ EE +N+F
Sbjct: 260 LVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFT 319
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ +P+ F+ +L AC L L+ +HG + +G ++ V +L+++Y+K G
Sbjct: 320 KMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSG 379
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N++ + VF M +D+++W++MI GY+ +G K+AL +F +M P Y T +GVLS
Sbjct: 380 NIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLS 439
Query: 241 ACASLGALELGVWA-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC L ++ G + M++ + T ++ + + G + +A MK QV
Sbjct: 440 ACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENF---MKTTTQV 496
Query: 300 VWNAV 304
W+ V
Sbjct: 497 KWDVV 501
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 207/419 (49%), Gaps = 14/419 (3%)
Query: 36 VLKACAREHDFQLGVRSHSLIV---KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+LK A + G H+ +V + D D SL+NLY CG A K+FD +
Sbjct: 29 LLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRML 88
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAK 151
+NVVSW+A++ GY+++G + E + +FR L+ P+ + VL+ C G + K
Sbjct: 89 QRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGK 148
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
HGY+ ++G + +V +L+ +Y++C +++ A ++ D +P D+ S++S++ +G
Sbjct: 149 QCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESG 208
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
EA + M E + + T V VL CA + L+LG+ + + + + + + +
Sbjct: 209 CRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSS 268
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
TLID Y KCG + A K F ++D++ V W AV++ NG+ + +F ++E +P
Sbjct: 269 TLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRP 328
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY---GCMVDLLGRSGQLDEA 388
N TF LL C A LV + + + ++ H ++++ +SG +D +
Sbjct: 329 NEFTFAVLLNAC--ASLV--ALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSS 384
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
+ + +M M + I W A++ G H A V +++ NYV + SA
Sbjct: 385 YNVFSNM-MNRDVITWNAMICGYSHHGLGKQALLVFQDMMS--AGECPNYVTFIGVLSA 440
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 132/287 (45%), Gaps = 18/287 (6%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+V +L L K IH + N+ K ++ SL++LY+KCG + AR++FD
Sbjct: 26 VVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFD 85
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALE 249
+M ++++VSWS+++ GY G E L +F N+ ++ P Y VLS CA G ++
Sbjct: 86 RMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVK 145
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G ++ ++ L + + LI MY++C + A ++ + D +N+++S L
Sbjct: 146 EGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALV 205
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR------VF 363
+G A V ++ + + T+V +L C + G Q + + VF
Sbjct: 206 ESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVF 265
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ +I+ YG ++L Q D + N + W A+L
Sbjct: 266 VSSTLIDTYGKCGEVLNARKQFDGLR--------DRNVVAWTAVLTA 304
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/611 (37%), Positives = 345/611 (56%), Gaps = 65/611 (10%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQL-GVRSHSLIVKAGL-DCDEFVKTSLLNL 74
+ MR P FTF F+ K + L H+ ++ L FV SL+++
Sbjct: 31 LFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHM 90
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL---------------------- 112
Y G D + FD+IP K+ VSWT +ISG G L
Sbjct: 91 YTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLI 150
Query: 113 ---------EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG 163
+EA++ F+ +L G+ PD +++ VL+AC+QL DL +H V E G
Sbjct: 151 AAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHLLVKEKGMS 210
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFD--------------------------------Q 191
+ + +L+D+YAKCG+ AR VFD Q
Sbjct: 211 MSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQ 270
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
M +DI++++SMI GY +G +EAL +F NM+R +L+ + +T+V +LSACASLGAL G
Sbjct: 271 MEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQG 330
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ +E ++ +GT L+DMY KCGR+ +A VF+ M +D W A+++GL+ N
Sbjct: 331 RALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFN 390
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G K F Q+ G QPN +++ +L C+H+ L++EGR +F+ M ++++ P IEH
Sbjct: 391 GMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEH 450
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
YGCM+DLLGRSG LDEA +L+K+MPM+PN+++W ++L+ CR+HK+ DLA+ L+ +E
Sbjct: 451 YGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIE 510
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P YV L NI S KW DA+KIR +M ++ ++K G S V V G VH+F+V D SH
Sbjct: 511 PDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSH 570
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P +I + L+E++ +LK+AG+ P T V D++EEEK+ L HSEKLA+AFGL++ AP
Sbjct: 571 PRILEIIAMLEEISHRLKSAGYSPITSQVTVDVDEEEKEQTLLAHSEKLAIAFGLVSLAP 630
Query: 552 KDVIRIAKNLR 562
+ I KNLR
Sbjct: 631 NLPVHIIKNLR 641
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 239/485 (49%), Gaps = 12/485 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHD-FQLGVRSHSLIVKA 59
++RG + + I + MR + ++ + +K C + + + G + H +++KA
Sbjct: 803 VLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKA 862
Query: 60 G-LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
G + + F+ SL++LY G D +K +DI ++V+SW +I+S Y + G+++EA+
Sbjct: 863 GWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYY 922
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-KGRNVFVATSLVDLYA 177
+++L G P S V +L + GD IHG V++ G +V V T+L+D+Y
Sbjct: 923 LKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYG 982
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KC + + +F+++P + +S+I AL++ + M E + P+ T
Sbjct: 983 KCCCFDHSLAIFNEIPSIALECCNSLITSSLGCNMFDAALEILHCMIVEGVTPDDVTFSA 1042
Query: 238 V-----LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
LSA SL + ++ S + + F + + ++LI YA G+++ + +F
Sbjct: 1043 TMKAISLSASPSLTSCQM---LHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEG 1099
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
+ D + + + A++S + G A +F Q+ G++P+ TF+ + GC AG+ +EG
Sbjct: 1100 LLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEG 1159
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
R M L P H+ CMV+LL R G + EA E+++ P+ W +LL C+
Sbjct: 1160 RLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCK 1219
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
H + L + N LI + + + +SN ++ A +I+ M K ++K G
Sbjct: 1220 AHGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKK-SGH 1278
Query: 473 SWVEV 477
S +EV
Sbjct: 1279 SLIEV 1283
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 184/369 (49%), Gaps = 42/369 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + D + A++ + +M +EG P + T VL AC++ D +LG H L+ + G
Sbjct: 149 LIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHLLVKEKG 208
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDI-----PD---------------------- 93
+ E + +L+++Y CG A +VFD + P
Sbjct: 209 MSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLF 268
Query: 94 -----KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
++++++ ++I+GYI+ G L EA+ +F + L+ D+F++V +L+AC LG L
Sbjct: 269 DQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALP 328
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
+ +H + ++++ T+L+D+Y KCG + +A VF +M ++D+ +W++MI G A
Sbjct: 329 QGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLA 388
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN-- 266
NG K L+ FY M+ + +P + + VL+AC+ L G + + L N
Sbjct: 389 FNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRL---YFDEMRILYNIH 445
Query: 267 PVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
P + +ID+ + G + +A + + M + V+W +++S ++ + +A
Sbjct: 446 PQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEH 505
Query: 324 LEKCGIQPN 332
L K I+P+
Sbjct: 506 LLK--IEPD 512
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 203/453 (44%), Gaps = 37/453 (8%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF+ + A Y M G T TF +L C+ QL H ++ G
Sbjct: 706 MITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQL----HGRVLALG 761
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L C+ FV ++L+N Y+H AL +F ++P +N ++ G N EE I F
Sbjct: 762 LCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFL 821
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGD-LSTAKWIHGYVNEAG-KGRNVFVATSLVDLYAK 178
+ + L+ + S + C Q G+ L + +HG V +AG N+F++ SLVDLY+
Sbjct: 822 DMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSA 881
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G+ + + + +D++SW+S++ YA G KEA+ M P + V +
Sbjct: 882 IGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSL 941
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREMKDKD 297
L+ G +LGV + + F + V + TTLIDMY KC + +F E+
Sbjct: 942 LALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIA 1001
Query: 298 QVVWNAVV-SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL-------------CGC 343
N+++ S L N + A + + G+ P+ TF + C
Sbjct: 1002 LECCNSLITSSLGCNMF-DAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQM 1060
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
H+ LV G F M+ SL I Y C +GQL +H + + + ++PN I
Sbjct: 1061 LHSCLVKLG--FEMDMAVCSSL---ITAYAC-------AGQLSSSHLIFEGL-LDPNVIC 1107
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIA--LEPWN 434
+ A+++ C + A + +Q+++ L+P N
Sbjct: 1108 FTAIISACARYGDGARAMELFDQMVSSGLKPDN 1140
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/609 (39%), Positives = 356/609 (58%), Gaps = 6/609 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I N + A+ Y MR P+NF L +CA G + H VK G
Sbjct: 455 IITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWG 514
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN-EGNLEEAINMF 119
L D V +L+ +Y CG +++ ++F+ + +VVSW +I+ + + + E++ +F
Sbjct: 515 LYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVF 574
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ GL P+ + V L A T L L K IH + + G + V +L+ YAK
Sbjct: 575 SNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKS 634
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
G+++ R+F +M +D +SW+SMI GY NG +EA+D M ++ T V
Sbjct: 635 GDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIV 694
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
L+ACAS+ ALE G+ +F R+ S+ V+ + L+DMY+KCGR+ A KVF M K++
Sbjct: 695 LNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNE 754
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WN+++SG + +G + A +F ++++ G P+ TFV +L C+HAGLV+ G +F
Sbjct: 755 FSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFEL 814
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK--- 415
M + + P IEHY C++DLLGR+G+LD+ E +K MPM+PN ++W +L C+ K
Sbjct: 815 MED-YGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRA 873
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
K DL L+ LEP N NYVL S ++A +W D AK R+ M ++K G SWV
Sbjct: 874 KIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWV 933
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
+ VH F+ GD SHP +++IY KL+ L K++ AG+VP T++VL D+EEE K+ L
Sbjct: 934 TLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRY 993
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+AF L ++ IRI KNLRVCGDCH A + IS+I GR+II+RD+ RFH F +
Sbjct: 994 HSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKD 1053
Query: 596 GSCSCKDFW 604
G CSC D+W
Sbjct: 1054 GKCSCGDYW 1062
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 210/458 (45%), Gaps = 20/458 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR----EHDFQLGVRSHSLI 56
+I G V + A E + R+ + + T+ +L A A E + G H+ +
Sbjct: 350 LIAGLVKQQHGEAAAEIFMGARDSAAVNVD-TYVVLLSAIAEFSTAEQGLRKGREVHAHV 408
Query: 57 VKAGLDCDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEA 115
++AG + V L+N+Y CG + A +VF + ++ +SW II+ G E A
Sbjct: 409 LRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAA 468
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+ + + + P +F+ + L++C LG L+ + +H + G + V+ +LV +
Sbjct: 469 MMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKM 528
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP-KEALDMFYNMQRENLKPEYYT 234
Y +CG M + +F+ M D+VSW+S++ AS+ P E++ +F NM + L P T
Sbjct: 529 YGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVT 588
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
V L+A L LELG S M ++ + + L+ YAK G + ++F M
Sbjct: 589 FVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMS 648
Query: 295 D-KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
+D + WN+++SG NG+++ A + + TF +L C ++ G
Sbjct: 649 GRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGM 708
Query: 354 QFFNSMSRVFSLTPMIEH----YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+ F L +E +VD+ + G++D A ++ SM + N W ++++
Sbjct: 709 EM-----HAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMS-QKNEFSWNSMIS 762
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
G H A + ++ E S ++V ++ SA
Sbjct: 763 GYARHGLGRKALEIFEEM--QESGESPDHVTFVSVLSA 798
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 202/425 (47%), Gaps = 21/425 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLG--VRSHSLI 56
+I G V + + A + +M EG PT+FTF VL+AC +LG V+ H L+
Sbjct: 137 LISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLV 196
Query: 57 VKAGLDCDEFVKTSLLNLYVHC--GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEE 114
K + V +L+++Y C G A +VFD P +++++W A++S Y G+
Sbjct: 197 SKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAIC 256
Query: 115 AINMFRRLLHRG----LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN--EAGKGRNVFV 168
+FR + + L+P + ++TA T L S +V ++G +++V
Sbjct: 257 TFTLFRAMQYDDSGIELRPTEHTFGSLITA-TYLSSCSLGLLDQLFVRVLKSGCSSDLYV 315
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
++LV +A+ G +++A+ ++ + E++ V+ + +I G + A ++F R++
Sbjct: 316 GSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMG-ARDSA 374
Query: 229 KPEYYTMVGVLSACASLGALELGVWA-----SSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
T V +LSA A E G+ + + + L++MYAKCG +
Sbjct: 375 AVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAI 434
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
+AC+VF+ M+ +D++ WN +++ L NGY + A + + + I P+ + L C
Sbjct: 435 DKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSC 494
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
GL+ G+Q + + L +V + G G++ E E+ SM + +
Sbjct: 495 AGLGLLAAGQQLHCDAVK-WGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAH-DVVS 552
Query: 404 WGALL 408
W +++
Sbjct: 553 WNSIM 557
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 182/375 (48%), Gaps = 21/375 (5%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H +VK GL D F+ L+N Y L A +VFD +P +N VSWT +ISG++ G
Sbjct: 88 HLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLP 147
Query: 113 EEAINMFRRLLHR--GLKPDSFSIVRVLTACTQLGD--LSTAKWIHGYVNEAGKGRNVFV 168
E+A +FR +L G +P SF+ VL AC G L A +HG V++ N V
Sbjct: 148 EDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTV 207
Query: 169 ATSLVDLYAKC--GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE 226
+L+ +Y C G A+RVFD P +D+++W++++ YA G +F MQ +
Sbjct: 208 CNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYD 267
Query: 227 N----LKPEYYTMVGVLSACASLGALELGVWASSFME--RNEFLSNPVLGTTLIDMYAKC 280
+ L+P +T G L L + LG+ F+ ++ S+ +G+ L+ +A+
Sbjct: 268 DSGIELRPTEHTF-GSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARH 326
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF-GQLEKCGIQPNGNTFVGL 339
G + +A ++ +K+++ V N +++GL + + A +F G + + N +T+V L
Sbjct: 327 GMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAV--NVDTYVVL 384
Query: 340 LCGCTHAGLVDE----GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
L ++ GR+ + R + I +V++ + G +D+A + + M
Sbjct: 385 LSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLM 444
Query: 396 PMEPNAIVWGALLAG 410
+ I W ++
Sbjct: 445 EAR-DRISWNTIITA 458
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 144/311 (46%), Gaps = 25/311 (8%)
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
++ + +H V + G ++F+A LV+ YAK ++ ARRVFD MP ++ VSW+ +I G+
Sbjct: 82 ASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGH 141
Query: 208 ASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVLSACASLGALELG--VWASSFMERNEF 263
+G P++A +F M RE +P +T VL AC G LG V + + EF
Sbjct: 142 VLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEF 201
Query: 264 LSNPVLGTTLIDMYAKC--GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
SN + LI MY C G A +VF +D + WNA++S + G F +F
Sbjct: 202 TSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLF 261
Query: 322 G--QLEKCGIQ--PNGNTFVGL-----LCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
Q + GI+ P +TF L L C+ GL+D Q F RV + Y
Sbjct: 262 RAMQYDDSGIELRPTEHTFGSLITATYLSSCS-LGLLD---QLF---VRVLKSGCSSDLY 314
Query: 373 --GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
+V R G LDEA ++ + E NA+ L+AG + + A +
Sbjct: 315 VGSALVSAFARHGMLDEAKDIYLGLK-ERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDS 373
Query: 431 EPWNSGNYVLL 441
N YV+L
Sbjct: 374 AAVNVDTYVVL 384
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/565 (40%), Positives = 342/565 (60%), Gaps = 36/565 (6%)
Query: 65 EFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
+FVK L+ + + Y A ++ D + + ++I + E++ + + R+L
Sbjct: 51 QFVKAVALSDHTYLDY---ANQILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILS 107
Query: 125 --RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA----- 177
GLKPD++++ ++ ACT LG T +HG G + V T L+ LYA
Sbjct: 108 SGNGLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCL 167
Query: 178 --------------------------KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+CG++ AR++F+ MPEKD ++W++MI GYA G
Sbjct: 168 DSCHKVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVG 227
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
+EAL++F+ MQ E +K +M+ VLSAC LGAL+ G WA S++ERN+ LGT
Sbjct: 228 ESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGT 287
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
TL+D+YAKCG M +A +VF M++K+ W++ ++GL+MNG+ + +F +++ G+ P
Sbjct: 288 TLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTP 347
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
N TFV +L GC+ G VDEG++ F+SM F + P ++HYGC+VDL R+G+L++A +
Sbjct: 348 NAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSI 407
Query: 392 IKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKW 451
I+ MPM+ +A VW +LL R++K +L +++ LE N G YVLLSNIY+ S W
Sbjct: 408 IQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDW 467
Query: 452 NDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAA 511
++ + +R M KG++K GCS +EV+G VHEF VGD SHP +I + +++ +L+ A
Sbjct: 468 DNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLA 527
Query: 512 GFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAI 571
G+ T V+FDI+EEEK+ L HSEK A+AFG+++ IRI KNLRVCGDCH+
Sbjct: 528 GYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKADVPIRIVKNLRVCGDCHQVS 587
Query: 572 KLISKITGREIIVRDNNRFHCFIEG 596
+ISKI REIIVRD NRFH F +G
Sbjct: 588 MMISKIFNREIIVRDRNRFHHFKDG 612
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/500 (41%), Positives = 312/500 (62%), Gaps = 5/500 (1%)
Query: 109 EGNLEEAINMFRRLLHR--GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNV 166
G L + + R++ G +P+ + + +++AC G+ IHG V ++G V
Sbjct: 613 RGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEV 672
Query: 167 FVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR- 225
V +L++LY K G++ + ++F+ + K++VSW++MI + NG +E L ++NM R
Sbjct: 673 KVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGL-AYFNMSRW 731
Query: 226 ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
LKP+ T + VL C +G + L + F +N + T L+D+YAK GR+
Sbjct: 732 VGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLED 791
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
+ VF E+ D + W A+++ + +GY + A F + G+ P+ TF LL C+H
Sbjct: 792 SSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSH 851
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
+GLV+EGR +F +MS+ + + P ++HY CMVDL+GRSG L +A+ LIK MPMEP++ VWG
Sbjct: 852 SGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWG 911
Query: 406 ALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKG 465
ALL CR++K T L +L LEP + NY++LSNIYSAS W DA++IR++M KG
Sbjct: 912 ALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKG 971
Query: 466 IQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAA-GFVPTTDHVLFDI 524
+ + G S++E +H+F+VGD SHP SEKI KL E+ K+K+ GF T+ VL D+
Sbjct: 972 LVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDV 1031
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
+E+ K+ + HSEK+A+AFGL+ +P + I I KNLR+CGDCHE K IS I R II+
Sbjct: 1032 DEDVKEEMINQHSEKIAMAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIII 1091
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD+ RFH F+EGSCSC+D+W
Sbjct: 1092 RDSKRFHHFLEGSCSCRDYW 1111
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 185/358 (51%), Gaps = 39/358 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MIR + + + +FY+ + G P N+T F+++AC + G++ H + ++
Sbjct: 85 MIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIR 144
Query: 59 AGLDCDEFVKTSLLNLYV-------------------------------HCGYLADALKV 87
G D D V+T L++LY CG +A A K+
Sbjct: 145 RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCGDVAFARKL 204
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F+ +P+K+ ++W A+ISGY G EA+N+F + G+K + S++ VL+ACTQLG L
Sbjct: 205 FEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGAL 264
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+W H Y+ V + T+LVDLYAKCG+M+KA VF M EK++ +WSS + G
Sbjct: 265 DQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGL 324
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A NGF ++ L +F M+++ + P T V VL C+ +G ++ G M RNEF P
Sbjct: 325 AMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSM-RNEFGIEP 383
Query: 268 VLG--TTLIDMYAKCGRMAQACKVFREMKDKDQ-VVWNAVVSGLSMNGYVKVAFGVFG 322
L L+D+YA+ GR+ A + ++M K VW++++ M Y + GV
Sbjct: 384 QLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRM--YKNLELGVLA 439
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 183/364 (50%), Gaps = 12/364 (3%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
RG++ CF+ MR+E GF P TF ++ AC + + GV H L++K+G+
Sbjct: 613 RGYLGK-CFE---VLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGV 668
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ V +L+NLY G L + K+F+D+ KN+VSW +I ++ G EE + F
Sbjct: 669 LEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNM 728
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
GLKPD + + VL C +G + ++ IHG + G N + T+L+DLYAK G
Sbjct: 729 SRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGR 788
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+E + VF ++ D ++W++M+ YA++G+ ++A+ F M L P++ T +L+A
Sbjct: 789 LEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNA 848
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
C+ G +E G + M + + P L + ++D+ + G + A + +EM +
Sbjct: 849 CSHSGLVEEGRYYFETMSK-RYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSS 907
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFFN 357
VW A++ + Y G ++P +G ++ L + +GL + + N
Sbjct: 908 GVWGALLGACRV--YKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRN 965
Query: 358 SMSR 361
M +
Sbjct: 966 LMKQ 969
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 1/194 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + N + + ++N R G P TF VL+ C +L H LI+ G
Sbjct: 709 MIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCG 768
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + + T+LL+LY G L D+ VF +I + ++WTA+++ Y G +AI F
Sbjct: 769 FNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFE 828
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS-LVDLYAKC 179
++H GL PD + +L AC+ G + ++ +++ + S +VDL +
Sbjct: 829 LMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRS 888
Query: 180 GNMEKARRVFDQMP 193
G ++ A + +MP
Sbjct: 889 GLLQDAYGLIKEMP 902
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/609 (37%), Positives = 351/609 (57%), Gaps = 17/609 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + ND + A M G LP +F VL +C + Q+ I+++G
Sbjct: 512 MLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQV---LRMCILESG 568
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++T+L++++ C L A VFD++ +VVSWTA++S + +E ++FR
Sbjct: 569 YR-SACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFR 627
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+ PD F++ L C L K IH V E G ++ V +L+++Y+ CG
Sbjct: 628 RMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCG 687
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL- 239
+ +A F+ M +D+VSW+ M YA G KEA+ +F +MQ E +KP+ T L
Sbjct: 688 DWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLN 747
Query: 240 ----SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
SA S G L G+ A S ++ S+ + T L+ +YAKCG++ +A +FR
Sbjct: 748 VSGGSALVSDGKLFHGLAAESGLD-----SDVSVATGLVKLYAKCGKLDEAISLFRGACQ 802
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
V+ NA++ L+ +G+ + A +F ++++ G++P+ T V ++ C HAG+V+EG
Sbjct: 803 WTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSS 862
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F +M F ++P +EHY C VDLLGR+GQL+ A ++I+ MP E N +VW +LL C+L
Sbjct: 863 FLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQG 922
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
+L E +++ L+P NS +V+LSNIY A+ KW DA R + D+ ++ G SW+
Sbjct: 923 DAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWL 982
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
E+ VHEF+ GD SHP +++IY LD+L ++ AG+ D E+E K+ L
Sbjct: 983 EIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYEADKG---LDAEDELKEKALGY 1039
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSE++A+AFGLI T P ++I KNLRVCGDCH A K IS I GREIIVRD+ RFH F
Sbjct: 1040 HSERIAIAFGLIATPPDTTLKIVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSN 1099
Query: 596 GSCSCKDFW 604
G+CSCKD W
Sbjct: 1100 GTCSCKDCW 1108
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 217/444 (48%), Gaps = 23/444 (5%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +L++C +D G R+H LI AGL+ F+ L+N+YV CG L +A +F +
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRR-LLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
++NVVSWTA+IS G A +FR LL P+S+++V +L AC DL+ +
Sbjct: 88 ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 152 WIHGYVNEAGKGRNVFVAT----SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
IH + E G R AT +++++YAKCG+ E A VF +PEKD+VSW++M Y
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207
Query: 208 AS-NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
A F +AL +F M + L P T + L AC S L G W S + +
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHEAGLGFD 264
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDK---DQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
P+ G LI+MY KCG A VF+ M + D V WNA++S G A +F +
Sbjct: 265 PLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRR 324
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEG--RQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
L G++PN T + +L +G VD G R+F + L ++ ++ + +
Sbjct: 325 LRLEGMRPNSVTLITILNALAASG-VDFGAARKFHGRIWESGYLRDVVVG-NAIISMYAK 382
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK----TDLAEHVLNQLIALEPWNSGN 437
G A + + + + + I W +L K + H+L L ++P N +
Sbjct: 383 CGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHML--LAGIDP-NKVS 439
Query: 438 YVLLSNIYSASHKWNDAAKIRSMM 461
++ + N S S + KI S++
Sbjct: 440 FIAILNACSNSEALDFGRKIHSLI 463
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 216/427 (50%), Gaps = 25/427 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I + F A + +M E P ++T +L ACA D +G H++I +
Sbjct: 97 LISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWEL 156
Query: 60 GLDCDE----FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL-EE 114
GL+ + V +++N+Y CG DA+ VF IP+K+VVSWTA+ Y E +
Sbjct: 157 GLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPD 216
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A+ +FR +L + L P+ + + L ACT L D W+H ++EAG G + +L++
Sbjct: 217 ALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEAGLGFDPLAGNALIN 273
Query: 175 LYAKCGNMEKARRVFDQMP---EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
+Y KCG+ E A VF M E D+VSW++MI G +A+ +F ++ E ++P
Sbjct: 274 MYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPN 333
Query: 232 YYTMVGVLSACASLGALELGVWASSFMER---NEFLSNPVLGTTLIDMYAKCGRMAQACK 288
T++ +L+A A+ G ++ G A F R + +L + V+G +I MYAKCG + A
Sbjct: 334 SVTLITILNALAASG-VDFGA-ARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWT 391
Query: 289 VFREMKDK-DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
VFR ++ K D + WN ++ F + GI PN +F+ +L C+++
Sbjct: 392 VFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSE 451
Query: 348 LVDEGRQFFN---SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV- 403
+D GR+ + + R + + + +V + G+ G + EA + K MP+ ++V
Sbjct: 452 ALDFGRKIHSLILTRRRDYVESSVATM---LVSMYGKCGSIAEAELVFKEMPLPSRSLVT 508
Query: 404 WGALLAG 410
W +L
Sbjct: 509 WNVMLGA 515
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 189/386 (48%), Gaps = 8/386 (2%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLD-CDEFVKT 69
F + ++ M G P +F +L AC+ G + HSLI+ D + V T
Sbjct: 418 FGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT 477
Query: 70 SLLNLYVHCGYLADALKVFDD--IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL 127
L+++Y CG +A+A VF + +P +++V+W ++ Y +EA +L G+
Sbjct: 478 MLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGV 537
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
PD+ S VL++C + A+ + + E+G R+ + T+L+ ++ +C +E+AR
Sbjct: 538 LPDALSFTSVLSSCYCSQE---AQVLRMCILESGY-RSACLETALISMHGRCRELEQARS 593
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
VFD+M D+VSW++M+ A N KE +F MQ E + P+ +T+ L C
Sbjct: 594 VFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTT 653
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
L LG + + ++ + L++MY+ CG +A F MK +D V WN + +
Sbjct: 654 LGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA 713
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
+ G K A +F ++ G++P+ TF L + LV +G+ F+ ++ L
Sbjct: 714 YAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGK-LFHGLAAESGLDS 772
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIK 393
+ +V L + G+LDEA L +
Sbjct: 773 DVSVATGLVKLYAKCGKLDEAISLFR 798
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/505 (41%), Positives = 307/505 (60%), Gaps = 3/505 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
+ Y+ M+ P NFTFPFV ACA + ++ +H + K GLD D S++
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLKPDSF 132
+Y CG A KVFD+I +K++VSW +++SGY G EA+ +F RL G +PD
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
S+V VL AC +LGDL +W+ G+V E G N ++ ++L+ +Y+KCG + +RR+FD M
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
P +D ++W++ I YA NG EA+ +F++M+ + P T+ VLSACAS+GAL+LG
Sbjct: 281 PSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGK 340
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ + + T LIDMYAKCG + A +VF +M K+ WNA++S L+ +G
Sbjct: 341 QMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHG 400
Query: 313 YVKVAFGVFGQLEKCG--IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
K A +F ++ G +PN TFV LL C HAGLVDEG + F+ MS +F L P IE
Sbjct: 401 KAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIE 460
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
HY CMVDLL R+G L EA ++I+ MP +P+ + GAL + C+ K D+ E V+ L+ L
Sbjct: 461 HYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLEL 520
Query: 431 EPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNS 490
+P NSGNY++ S IY + W+DAA++R++M + G+ K GCSW+EV + EFL GD
Sbjct: 521 DPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGL 580
Query: 491 HPLSEKIYSKLDELATKLKAAGFVP 515
S + + +D L +LK G+VP
Sbjct: 581 TLDSIDVRNIIDLLYEELKKEGYVP 605
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
I + N AI ++SM+ G P T VL ACA LG + GL
Sbjct: 292 ISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGL 351
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
D FV T+L+++Y CG L A +VF+D+P KN SW A+IS + G +EA+++F R
Sbjct: 352 QHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFER 411
Query: 122 LLHRG--LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAK 178
+ G +P+ + V +L+AC G + + ++ G + + +VDL ++
Sbjct: 412 MSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSR 471
Query: 179 CGNMEKARRVFDQMPEK 195
G++ +A V ++MPEK
Sbjct: 472 AGHLYEAWDVIEKMPEK 488
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/608 (37%), Positives = 341/608 (56%), Gaps = 31/608 (5%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P+ T ++ A + D LG + H I++ G F + L+++Y G + DA +V
Sbjct: 147 PSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRV 206
Query: 88 FDDIPDKNVV-------------------------------SWTAIISGYINEGNLEEAI 116
FD++ KNVV +WT +++G G EA+
Sbjct: 207 FDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEAL 266
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
++FRR+ G+ D ++ +LTAC L K IH Y N+FV ++LVD+Y
Sbjct: 267 DVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMY 326
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+KC ++ A VF +M K+I+SW++MI GY NG +EA+ +F MQ + +KP +T+
Sbjct: 327 SKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLG 386
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
V+S+CA+L +LE G + + + L+ +Y KCG + A ++F EM
Sbjct: 387 SVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFH 446
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
DQV + A+VSG + G K +F ++ G++PNG TF+G+L C+ +GLV++G +F
Sbjct: 447 DQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYF 506
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+SM + + + +HY CM+DL RSG+L EA E I+ MP P+AI W LL+ CRL
Sbjct: 507 HSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGD 566
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
++ + L+ +P N +YVLL +++++ +W++ A +R M D+ ++K GCSW++
Sbjct: 567 MEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIK 626
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
VH F D SHP S IY KL L +K+ G+ P VL D+ + EK + L+ H
Sbjct: 627 YKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNH 686
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEKLA+AFGLI + IR+ KNLRVC DCH A K ISKITGR+I+VRD RFH F G
Sbjct: 687 SEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNG 746
Query: 597 SCSCKDFW 604
CSC DFW
Sbjct: 747 ICSCGDFW 754
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 225/485 (46%), Gaps = 58/485 (11%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P + +L A AR L R + A D + F + +LL+ H L D ++
Sbjct: 43 PPTYVLNHLLTAYARSGRLPLARR----LFDAMPDPNLFTRNALLSALAHARLLPDMDRL 98
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-------GLKPDSFSIVRVLTA 140
F +P ++ VS+ A+I+G+ G A +R LL ++P ++ ++ A
Sbjct: 99 FASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMA 158
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK---------------------- 178
+ LGD + + +H + G G F + LVD+YAK
Sbjct: 159 ASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMY 218
Query: 179 ---------CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
C +E+AR VF+ M ++D ++W++M+ G NG EALD+F M+ E +
Sbjct: 219 NTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVG 278
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
+ YT +L+AC +L A E G ++ R + N +G+ L+DMY+KC + A V
Sbjct: 279 IDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAV 338
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
FR M K+ + W A++ G NG + A VF +++ GI+PN T ++ C + +
Sbjct: 339 FRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASL 398
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
+EG Q F+ M+ V L P I +V L G+ G +++AH L MP + + + AL++
Sbjct: 399 EEGAQ-FHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFH-DQVSYTALVS 456
Query: 410 GC----RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAK----IRSMM 461
G + + DL E +L L ++P N V + SA + K SM
Sbjct: 457 GYAQFGKAKETIDLFEKML--LKGVKP----NGVTFIGVLSACSRSGLVEKGCSYFHSMQ 510
Query: 462 GDKGI 466
D GI
Sbjct: 511 QDHGI 515
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 185/345 (53%), Gaps = 8/345 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G N A++ + MR EG +TF +L AC + G + H+ ++
Sbjct: 252 MVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTL 311
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + FV ++L+++Y C + A VF + KN++SWTA+I GY G EEA+ +F
Sbjct: 312 YDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFS 371
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+KP+ F++ V+++C L L H +G + V+++LV LY KCG
Sbjct: 372 EMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCG 431
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A R+FD+MP D VS+++++ GYA G KE +D+F M + +KP T +GVLS
Sbjct: 432 SIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLS 491
Query: 241 ACASLGALELGVWASSFMERNE---FLSNPVLGTTLIDMYAKCGRMAQACKVFREM-KDK 296
AC+ G +E G M+++ L + T +ID+Y++ GR+ +A + R+M +
Sbjct: 492 ACSRSGLVEKGCSYFHSMQQDHGIVLLDDHY--TCMIDLYSRSGRLKEAEEFIRQMPRCP 549
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
D + W ++S + G +++ L K Q N ++V LLC
Sbjct: 550 DAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQ-NPASYV-LLC 592
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 139/331 (41%), Gaps = 47/331 (14%)
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+ R L H P ++ + +LTA + G L A+ + +A N+F +L+ A
Sbjct: 35 VLRTLPH---PPPTYVLNHLLTAYARSGRLPLARRLF----DAMPDPNLFTRNALLSALA 87
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-------NLKP 230
+ R+F MP++D VS++++I G++ G P A + + RE ++P
Sbjct: 88 HARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRP 147
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
TM G++ A ++LG LG + R F + + L+DMYAK G + A +VF
Sbjct: 148 SRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVF 207
Query: 291 RE-------------------------------MKDKDQVVWNAVVSGLSMNGYVKVAFG 319
E M D+D + W +V+GL+ NG A
Sbjct: 208 DEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALD 267
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
VF ++ G+ + TF +L C +EG+Q R I +VD+
Sbjct: 268 VFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTL-YDGNIFVGSALVDMY 326
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + A + + M + N I W A++ G
Sbjct: 327 SKCRSIRLAEAVFRRMTCK-NIISWTAMIVG 356
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/609 (38%), Positives = 351/609 (57%), Gaps = 44/609 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF N A+ + M+ EG PT +T VL AC + D + G + H I+
Sbjct: 126 VISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICN 185
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + FV +L +LY CG + A ++FD + +NVV+W +ISGY+ E+ I++F
Sbjct: 186 LGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFH 245
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ LKPD + A+S++ Y + G
Sbjct: 246 EMQVSNLKPDQVT-----------------------------------ASSVLGAYIQAG 270
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+++AR+VF ++ EKD V W+ MI G A NG ++AL +F M EN +P+ YT+ V+S
Sbjct: 271 YIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVS 330
Query: 241 ACASLGALELG--VWASSF-MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+CA L +L G V +F M N+ L ++ + L+DMY KCG A +F M+ ++
Sbjct: 331 SCAKLASLYHGQVVHGKAFLMGVNDDL---LVSSALVDMYCKCGVTRDAWTIFSTMQTRN 387
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WN+++ G ++NG A ++ + + ++P+ TFVG+L C HAGLV+EG+++F
Sbjct: 388 VVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFC 447
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
SMS L P +HY CMV+L GRSG +D+A +LI SM EPN+++W +L+ C +
Sbjct: 448 SMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDI 507
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
E LI L P+N+ Y++LSN+Y+A +W D A IRS+M K ++K SW+E+
Sbjct: 508 KHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEI 567
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
D VH+F+ D +HP ++ I+ +L+ L KL+ AGF P T+ VL D E+EK + HS
Sbjct: 568 DNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHS 627
Query: 538 EKLALAFGLITTAPKDV--IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
EKLALA+GLI P V IRI KN+R C DCH +K +S IT R +I+RD+NRFH F+E
Sbjct: 628 EKLALAYGLIKK-PHGVTPIRIIKNIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVE 686
Query: 596 GSCSCKDFW 604
G CSCKD+W
Sbjct: 687 GKCSCKDYW 695
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 179/356 (50%), Gaps = 47/356 (13%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D F ++L+LY G + D +FD++P ++ VS+ +ISG+ G A+ +F R+
Sbjct: 88 DNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQ 147
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
GLKP ++ V VL ACTQL DL K IHG + G NVFV +L DLYA+CG ++
Sbjct: 148 KEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEID 207
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
+ARR+FD+M +++V+W+ MI GY N P++ +D+F+ MQ NLKP+ T VL A
Sbjct: 208 QARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA-- 265
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
Y + G + +A KVF E+++KD+V W
Sbjct: 266 ---------------------------------YIQAGYIDEARKVFGEIREKDEVCWTI 292
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT-----HAGLVDEGRQFFNS 358
++ G + NG + A +F ++ +P+G T ++ C + G V G+ F
Sbjct: 293 MIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMG 352
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
++ ++ +VD+ + G +A + +M N + W +++ G L+
Sbjct: 353 VNDDLLVS------SALVDMYCKCGVTRDAWTIFSTMQTR-NVVSWNSMIGGYALN 401
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 13/289 (4%)
Query: 127 LKP-DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
KP D+F R+L + G++S A+ + + + R+ F +++ LYAK G +E
Sbjct: 53 FKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQ----RDNFSWNAMLSLYAKSGLVEDL 108
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
R +FD MP +D VS++++I G+A NG AL +F MQ+E LKP YT V VL+AC L
Sbjct: 109 RVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQL 168
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
L G + N + L D+YA+CG + QA ++F M ++ V WN ++
Sbjct: 169 LDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMI 228
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
SG N + +F +++ ++P+ T +L AG +DE R+ F + +
Sbjct: 229 SGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEV 288
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME---PNAIVWGALLAGC 411
I GC ++G+ ++A L M +E P+ ++++ C
Sbjct: 289 CWTIMIVGC-----AQNGKEEDALLLFSEMLLENARPDGYTISSVVSSC 332
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/441 (45%), Positives = 293/441 (66%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
RN+ V T+++ Y++ G +E AR +FDQM EKD+V WS+MI GYA + P+EAL++F M
Sbjct: 12 RNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEM 71
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
Q +KP+ T++ V+SACA LG L+ W ++++N + LIDMYAKCG +
Sbjct: 72 QVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNL 131
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
A VF +M+ ++ + W ++++ +++G A F Q++ I+PNG TFVG+L C
Sbjct: 132 GAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYAC 191
Query: 344 THAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV 403
+HAGLV+EGR+ F SM+ ++TP EHYGCMVDL GR+ L +A EL+++MP+ PN ++
Sbjct: 192 SHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVI 251
Query: 404 WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGD 463
WG+L+A C++H + +L E Q++ LEP + G V LSNIY+ +W D ++R++M
Sbjct: 252 WGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQ 311
Query: 464 KGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
+GI K RGCS +E++ V+EF++ D H ++KIY KLDE+ +LK G+ P T VL D
Sbjct: 312 RGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLVD 371
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
+EEE K+ + HSEKLAL +GL+ IRI KNLRVC DCH IKL+SK+ G EII
Sbjct: 372 VEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIKLVSKVYGMEII 431
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
VRD RFH + G CSC D+W
Sbjct: 432 VRDRTRFHHYKAGVCSCNDYW 452
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 159/269 (59%), Gaps = 6/269 (2%)
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 126
V T++++ Y G + DA +FD + +K++V W+A+ISGY +EA+N+F + G
Sbjct: 16 VLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFG 75
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
+KPD +I+ V++AC +LG L AKWIH YV++ G G + V +L+D+YAKCGN+ AR
Sbjct: 76 IKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAAR 135
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
VF++M ++++SW+SMI +A +G AL FY M+ EN+KP T VGVL AC+ G
Sbjct: 136 GVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAG 195
Query: 247 ALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNA 303
+E G +AS E N + G ++D++ + + A ++ M + V+W +
Sbjct: 196 LVEEGRRTFASMTNEHNITPKHEHYG-CMVDLFGRANLLRDALELVETMPLAPNVVIWGS 254
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
+++ ++G + G F + ++P+
Sbjct: 255 LMAACQIHG--ENELGEFAAKQVLELEPD 281
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 4/234 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ +D Q A+ ++ M+ G P T V+ ACAR H + K G
Sbjct: 51 MISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNG 110
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L V +L+++Y CG L A VF+ + +NV+SWT++I+ + G+ A+ F
Sbjct: 111 LGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFY 170
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG-YVNEAGKGRNVFVATSLVDLYAKC 179
++ +KP+ + V VL AC+ G + + NE +VDL+ +
Sbjct: 171 QMKDENIKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRA 230
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ A + + MP ++V W S++ +G + L F Q L+P++
Sbjct: 231 NLLRDALELVETMPLAPNVVIWGSLMAACQIHG--ENELGEFAAKQVLELEPDH 282
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 320/522 (61%), Gaps = 16/522 (3%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A ++FD I N+V + + GY + I FRR L ++
Sbjct: 80 AHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRRCLR---------------LVSK 124
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+ L+ K +H + + G N++V +L+++Y CG+++ +RRVFD++ E +V+++++
Sbjct: 125 VKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAI 184
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I A N EAL +F +Q LKP TM+ VLS+CA LG+L+LG W ++++ F
Sbjct: 185 IMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGF 244
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ TTLIDMYAKCG + A VFR+M +D W+A++ + +G A + +
Sbjct: 245 DRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNE 304
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
++K +QP+ TF+G+L C+H GLV+EG ++F+ M+ + + P I+HYGCMVDLLGR+G
Sbjct: 305 MKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAG 364
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
+LDEA++ I +P++P I+W LL+ C H ++ + V+ ++ L+ + G+YV+ SN
Sbjct: 365 RLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSN 424
Query: 444 IYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDE 503
+ + KW+D +R M DKG KI GCS +EV+ VVHEF G+ H S ++ LDE
Sbjct: 425 LCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDE 484
Query: 504 LATKLKAAGFVPTTDHVLF-DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
L +LK+AG+VP T V + D+E+EEK+ L HSEKLA+ FGL+ T P IR+ KNLR
Sbjct: 485 LVKELKSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLR 544
Query: 563 VCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
VCGDCH A K IS I GR+II+RD RFH F +G CSC D+W
Sbjct: 545 VCGDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 158/279 (56%), Gaps = 4/279 (1%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G + H VK G+ + +V +L+N+Y CG + + +VFD I + VV++ AII
Sbjct: 131 GKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLAR 190
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
EA+ +FR L GLKP +++ VL++C LG L +W+H YV + G R V V
Sbjct: 191 NNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKV 250
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
T+L+D+YAKCG+++ A VF MP++D +WS++I YA++G +A+ M M++E +
Sbjct: 251 NTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKV 310
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQA 286
+P+ T +G+L AC+ G +E G M NE+ P + ++D+ + GR+ +A
Sbjct: 311 QPDEITFLGILYACSHNGLVEEGFEYFHGMT-NEYGIVPSIKHYGCMVDLLGRAGRLDEA 369
Query: 287 CKVFREMKDKDQ-VVWNAVVSGLSMNGYVKVAFGVFGQL 324
K E+ K ++W ++S S +G V++ V ++
Sbjct: 370 YKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERI 408
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 2/213 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I N+ A+ + ++ G PT+ T VL +CA LG H + K G
Sbjct: 184 IIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYG 243
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V T+L+++Y CG L DA+ VF D+P ++ +W+AII Y G+ +AI+M
Sbjct: 244 FDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLN 303
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ ++PD + + +L AC+ G + ++ HG NE G ++ +VDL +
Sbjct: 304 EMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRA 363
Query: 180 GNMEKARRVFDQMPEKDI-VSWSSMIQGYASNG 211
G +++A + D++P K + W +++ +++G
Sbjct: 364 GRLDEAYKFIDELPIKPTPILWRTLLSACSTHG 396
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 24/319 (7%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC---GNMEKARRVFD 190
++ ++ CT L +L K I Y + N V T ++ +ME A ++FD
Sbjct: 29 LISLIPKCTTLKEL---KQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFD 85
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
Q+ + +IV +++M +GYA P L M + +R L + + AL
Sbjct: 86 QITQPNIVLFNTMARGYARLNDP---LRMITHFRR------------CLRLVSKVKALAE 130
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G F + N + TLI+MY CG + + +VF ++ + V +NA++ L+
Sbjct: 131 GKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLAR 190
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
N A +F +L++ G++P T + +L C G +D GR + + + + ++
Sbjct: 191 NNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGR-WMHEYVKKYGFDRYVK 249
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
++D+ + G LD+A + + MP + + W A++ H A +LN++
Sbjct: 250 VNTTLIDMYAKCGSLDDAVNVFRDMP-KRDTQAWSAIIVAYATHGDGFQAISMLNEM-KK 307
Query: 431 EPWNSGNYVLLSNIYSASH 449
E L +Y+ SH
Sbjct: 308 EKVQPDEITFLGILYACSH 326
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/494 (41%), Positives = 307/494 (62%), Gaps = 3/494 (0%)
Query: 114 EAINMFRRLLHRGLKPDSFSIVRVLTACTQL-GDLSTAKWIHGYVNEAGKGRNVFVATSL 172
A F +L + P+ F+ +L AC L G H + G + +V+ +L
Sbjct: 109 RAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTL 168
Query: 173 VDLYAKCGN--MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+ +Y+ G + AR VFD+MP++ V+WS+MI GY G +A+D+F MQ ++
Sbjct: 169 IHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQA 228
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ T++GVL+A LGALEL W F+ER + L LID AKCG + A VF
Sbjct: 229 DEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVF 288
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M+ + V W +V+ L+M G K A VF +++ G+ P+ F+G+L C+HAG+VD
Sbjct: 289 EGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVD 348
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
EG +F++M + + P IEHYGCMVD+ GR+G ++ A E +++MP++PN ++W +L++
Sbjct: 349 EGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSA 408
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CR H + +L E + L+ P + NY++LSN+++ + +W + ++IR M +GI+K+
Sbjct: 409 CRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVP 468
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
GCS VE+DG VHEF+ GD SHP + IY ++E+A +L+ G + T VL D++EE+K+
Sbjct: 469 GCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKE 528
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L HSEKLA+AF L+ T P +R+ KNLRVC DCH AIK IS++ REI+VRD +RF
Sbjct: 529 GALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRF 588
Query: 591 HCFIEGSCSCKDFW 604
H F +GSCSCKDFW
Sbjct: 589 HRFKDGSCSCKDFW 602
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 178/311 (57%), Gaps = 9/311 (2%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
A F+ M +P FTFPF+LKACA +G+++H+ +K G D++V +L
Sbjct: 109 RAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTL 168
Query: 72 LNLYVHC---GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+++Y C G+L DA VFD +P ++ V+W+A+I GY+ G +A+++FR + G++
Sbjct: 169 IHMY-SCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQ 227
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
D +++ VL A T LG L A+W+ +V G G++V + +L+D AKCG+++ A V
Sbjct: 228 ADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAV 287
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F+ M ++ +VSW+S+I A G KEA+ +F M+ + P+ +GVL+AC+ G +
Sbjct: 288 FEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMV 347
Query: 249 ELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
+ G M + E+ P + ++DM+ + G + +A + R M + V+W ++V
Sbjct: 348 DEGCGYFDAM-KVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLV 406
Query: 306 SGLSMNGYVKV 316
S +G +++
Sbjct: 407 SACRAHGRLEL 417
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 2/213 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V A++ + M+ G T VL A +L + + G
Sbjct: 201 MIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREG 260
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + +L++ CG + A+ VF+ + ++VVSWT++I EG +EA+ +F
Sbjct: 261 IGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFE 320
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ PD + + VLTAC+ G + + E G + +VD++ +
Sbjct: 321 EMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRA 380
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG 211
G +E+A MP + + V W S++ ++G
Sbjct: 381 GMVERAMEFVRTMPIQPNPVIWRSLVSACRAHG 413
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/640 (36%), Positives = 357/640 (55%), Gaps = 39/640 (6%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
I G + + + M EG P F V++ CA D + G R H +++ G
Sbjct: 83 ISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNG 142
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVF-------------------------------D 89
+ D + ++L++Y CG A +VF D
Sbjct: 143 VHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFD 202
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD--SFSIVRVLTACTQLGDL 147
+ P ++ SW IISG + G+ +A++ RR+ G+ + ++S VL L DL
Sbjct: 203 ESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDL 262
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP--EKDI-VSWSSMI 204
+ +HG V A + FV +SL+D+Y KCG +E A VFD +D+ +WS+M+
Sbjct: 263 --GRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMV 320
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GY NG +EALD+F M RE + + +T+ V +ACA++G +E G +E+ +
Sbjct: 321 AGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYK 380
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
+ L + ++DMYAKCG + A +F K+ VW +++ + +G ++A +F ++
Sbjct: 381 LDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERM 440
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ PN T VG+L C+H GLV EG +F M + + P IEHY C+VDL GRSG
Sbjct: 441 TAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGL 500
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
LD+A I+ + AIVW LL+ CRLH+ + A+ +L+ LE ++G+YV+LSNI
Sbjct: 501 LDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNI 560
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+ ++KW+D ++R M ++ ++K G SW+ + VH F+ GD SHP S +IY+ L++L
Sbjct: 561 YATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKL 620
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
+LK G+ TD V+ D+E+E+++ L HSEKLA+AFG+I+T +RI KNLRVC
Sbjct: 621 VERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVC 680
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCHEAIK IS TGREI+VRD RFH F + SCSC+DFW
Sbjct: 681 EDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 179/419 (42%), Gaps = 42/419 (10%)
Query: 68 KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG- 126
+ S+L +V DA VFD+ P + WT ISG G + + F +L G
Sbjct: 48 RASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGE 107
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
P++F + V+ C +GD+ + K +HG++ G +V + +++D+YAKCG E+AR
Sbjct: 108 ATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERAR 167
Query: 187 RV-------------------------------FDQMPEKDIVSWSSMIQGYASNGFPKE 215
RV FD+ P +D SW+++I G +G +
Sbjct: 168 RVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAAD 227
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL M + + +YT L +LG + + + ++L+D
Sbjct: 228 ALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMD 287
Query: 276 MYAKCGRMAQACKVF---REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
MY KCG + A VF + W+ +V+G NG + A +F ++ + G+ +
Sbjct: 288 MYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAAD 347
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL--TPMIEHYGCMVDLLGRSGQLDEAHE 390
T + C + G+V++GRQ + +++ P+ +VD+ + G L++A
Sbjct: 348 RFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLA---SAIVDMYAKCGNLEDARS 404
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
+ N VW ++L H + +A + ++ A E L+ + + SH
Sbjct: 405 IFDR-ACTKNIAVWTSMLCSYASHGQGRIAIELFERMTA-EKMTPNEITLVGVLSACSH 461
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 5/230 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+V N + A++ + M EG FT V ACA + G + H + K
Sbjct: 319 MVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLW 378
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + ++++++Y CG L DA +FD KN+ WT+++ Y + G AI +F
Sbjct: 379 YKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFE 438
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ + P+ ++V VL+AC+ +G +S + + E G ++ +VDLY +
Sbjct: 439 RMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRS 498
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQR 225
G ++KA+ ++ + + W +++ + N + K A + +++
Sbjct: 499 GLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQ 548
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/526 (41%), Positives = 328/526 (62%), Gaps = 6/526 (1%)
Query: 84 ALKVFDDIPDKNVVSWTAII---SGYINEGNLEEAINMFRRLLHRGLK-PDSFSIVRVLT 139
A +FD IP+ + ++I S + + ++RR+L G P+SF++ L
Sbjct: 80 ARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSFTLAFALK 139
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-EKDIV 198
AC+ + L + +H G + +V T L++LYAKC + AR VFD M +K++
Sbjct: 140 ACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKNLA 199
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+WS+MI GY+ G EAL +F MQ ++ P+ TMV V+SACA GAL+LG W +F+
Sbjct: 200 AWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFI 259
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+R + L T LIDMYAKCG + +A VF M ++D W+A++ GL+++G V+VA
Sbjct: 260 DRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVAL 319
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
+F ++ + ++PN TF+G+L C H+GLV+EGR+++++M + P +E+YGCMVDL
Sbjct: 320 KLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQE-LGIKPSMENYGCMVDL 378
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNY 438
RS LDEA+ + M + PN+++W LL + + D+ + +L+ LEP N NY
Sbjct: 379 FCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPENY 438
Query: 439 VLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIY 498
VLLSN+Y+++ +W+ + +R M + + + GCS +E++G +H+F+V D+SHP ++I
Sbjct: 439 VLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSSIEINGYLHKFVVSDDSHPEIKEIR 498
Query: 499 SKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIA 558
L E+A ++ AG P T VL D+ EEEK+ L HSE+LA+A+GL+ T VIR+
Sbjct: 499 LLLREIADRVVRAGHKPWTAAVLHDVGEEEKEVALCEHSERLAIAYGLLKTKAPHVIRVV 558
Query: 559 KNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLR C DCHE K++SK REIIVRD RFH F+EGSCSCKDFW
Sbjct: 559 KNLRFCPDCHEVAKIVSKSYDREIIVRDRVRFHRFVEGSCSCKDFW 604
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 173/318 (54%), Gaps = 9/318 (2%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
+ +R LP +FT F LKAC+ G + HS + GL+ +V+T LLNLY
Sbjct: 118 YRRMLRAGSPLPNSFTLAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYA 177
Query: 77 HCGYLADALKVFDD-IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIV 135
C +A A VFD + DKN+ +W+A+I GY G + EA+ +FR + + PD ++V
Sbjct: 178 KCEEVALARTVFDGMVGDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMV 237
Query: 136 RVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
V++AC + G L +W+H +++ G ++ ++T+L+D+YAKCG +E+A+ VFD M E+
Sbjct: 238 SVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAER 297
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
D +WS+MI G A +G + AL +F M ++P T +GVLSACA G + G
Sbjct: 298 DTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYW 357
Query: 256 SFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNA-VVSGLSMN 311
S M+ E P + ++D++ + + +A M + V+W +V+ + N
Sbjct: 358 STMQ--ELGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSN 415
Query: 312 GY--VKVAFGVFGQLEKC 327
+ V+ A +LE C
Sbjct: 416 RFDIVQSASKKLLELEPC 433
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 114/246 (46%), Gaps = 2/246 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ A+ + M+ P T V+ ACA+ LG H+ I + G
Sbjct: 204 MIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKG 263
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D + T+L+++Y CG + A VFD + +++ +W+A+I G G +E A+ +F
Sbjct: 264 ITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFS 323
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+L ++P++ + + VL+AC G ++ + + E G ++ +VDL+ +
Sbjct: 324 RMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQELGIKPSMENYGCMVDLFCRSS 383
Query: 181 NMEKARRVFDQM--PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
+++A M P ++ + ++ SN F ++ E PE Y ++
Sbjct: 384 LLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSN 443
Query: 239 LSACAS 244
L A S
Sbjct: 444 LYASNS 449
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/653 (34%), Positives = 370/653 (56%), Gaps = 51/653 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF + + M+ +G P +T VLK C+ +++ QLG H+ +++ G
Sbjct: 361 LISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNG 420
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D D + S+L+LY+ C A ++F+ + + +VVSW +I Y+ G++E++++MFR
Sbjct: 421 IDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFR 480
Query: 121 RLLHRGL---------------------------------KPDSFSIVRVLTACTQLGDL 147
RL ++ + +FSI +L + L +
Sbjct: 481 RLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILA--SSLSHV 538
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR----------------RVFDQ 191
+ +HG V + G + F+ +SLV++Y KCG M+KA RV +
Sbjct: 539 ELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYK 598
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
P+ IVSW SM+ GY NG ++ L F M RE + + T+ ++SACA+ G LE G
Sbjct: 599 EPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFG 658
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+++++ + +G++LIDMY+K G + A VFR+ + + V+W +++SG +++
Sbjct: 659 RHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALH 718
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G A G+F ++ GI PN TF+G+L C+HAGL++EG ++F M + + P +EH
Sbjct: 719 GQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEH 778
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
MVDL GR+G L + I + VW + L+ CRLHK ++ + V L+ +
Sbjct: 779 CTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVA 838
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P + G YVLLSN+ +++H+W++AA++RS+M +G++K G SW+++ +H F++GD SH
Sbjct: 839 PSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSH 898
Query: 492 PLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAP 551
P ++IYS LD L +LK G+ V+ D+EEE+ + ++ HSEKLA+ FG+I TA
Sbjct: 899 PQDDEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTAN 958
Query: 552 KDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ IRI KNLR+C DCH IK S++ REIIVRD +RFH F GSCSC D+W
Sbjct: 959 RTPIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 216/464 (46%), Gaps = 65/464 (14%)
Query: 25 GF-LPTNFTFPFVLKACAREHDFQLGVRS------HSLIVKAGLDCDEFVKTSLLNLYVH 77
GF + + F P L++C+ H F L H+L VK G LL LY
Sbjct: 278 GFSISSYFYPPLWLQSCSLYH-FTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAK 336
Query: 78 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
+A A K+FD+IP +N +WT +ISG+ G+ E N+FR + +G P+ +++ V
Sbjct: 337 SNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSV 396
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI 197
L C+ +L K +H ++ G +V + S++DLY KC E A R+F+ M E D+
Sbjct: 397 LKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDV 456
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNM--------------------QRENLKPEY----- 232
VSW+ MI Y G +++LDMF + +R L+ Y
Sbjct: 457 VSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVEC 516
Query: 233 ------YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
T L +SL +ELG + + F S+ + ++L++MY KCGRM +A
Sbjct: 517 GTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKA 576
Query: 287 CKVFREM---------------KDKDQVV-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
+ R++ + K +V W ++VSG NG + F + + +
Sbjct: 577 SIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVV 636
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY--GCMVDLLGRSGQLDEA 388
+ T ++ C +AG+++ GR + ++ I+ Y ++D+ +SG LD+A
Sbjct: 637 VDIRTVTTIISACANAGILEFGRHVHAYVQKI---GHRIDAYVGSSLIDMYSKSGSLDDA 693
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKK----TDLAEHVLNQLI 428
+ + EPN ++W ++++G LH + L E +LNQ I
Sbjct: 694 WMVFRQ-SNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGI 736
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/560 (40%), Positives = 341/560 (60%), Gaps = 13/560 (2%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHC-----GYLADALKVFDDIPDKNVVSWTAIISG 105
R H I+K+ D SL L + C L+ A VF IP + +++ II
Sbjct: 6 RLHCYIIKSSKQNDPL---SLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRS 62
Query: 106 YINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+ + ++ F + G+ D+F+ VL AC++L +H + + G +
Sbjct: 63 H-SRFFPSHSLFYFFSMRSNGIPLDNFTFPFVLKACSRL---QINLHLHSLIVKYGLDSD 118
Query: 166 VFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR 225
+FV +L+ +Y CG++E A +VFD+M E+D VSWS++I + +NG+ EALD+F MQ
Sbjct: 119 IFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQL 178
Query: 226 EN-LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
E+ + P+ TM+ V+SA + LG LELG W +F+ R + LGT LIDM+++CG +
Sbjct: 179 EDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSID 238
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
++ VF +M ++ + W A+++GL ++G A +F + K G+QP+ TF G+L C+
Sbjct: 239 ESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACS 298
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
H GLV EG F S+ +V+ + P+++HYGCMVD+LGR+G L+EA++ ++ MPM+PN+I+W
Sbjct: 299 HGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIW 358
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
LL C H LAE V ++ + +G+ VLLSN+Y A+ +W + A IRS M +K
Sbjct: 359 RTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREK 418
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
I K GCS + VD +HEF+ GDNSHP SE I L + L+ G++ T +VL DI
Sbjct: 419 RIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDI 478
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
EEEE+++ L+ HSEKLA+AF +++ K IRI KNLR+C DCH +K IS R+II+
Sbjct: 479 EEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKIII 538
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD NRFH F +G CSC D+W
Sbjct: 539 RDRNRFHHFEKGLCSCHDYW 558
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 199/327 (60%), Gaps = 8/327 (2%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
H++ ++ SMR+ G NFTFPFVLKAC+R Q+ + HSLIVK GLD D FV+ +L
Sbjct: 69 SHSLFYFFSMRSNGIPLDNFTFPFVLKACSR---LQINLHLHSLIVKYGLDSDIFVQNAL 125
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL-LHRGLKPD 130
+ +Y +CG L A+KVFD++ +++ VSW+ +I+ ++N G EA+++F ++ L + PD
Sbjct: 126 ICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPD 185
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+++ V++A + LGDL +W+ ++ G G +V + T+L+D++++CG+++++ VF+
Sbjct: 186 EVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESIVVFE 245
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M +++++W+++I G +G EAL MF++M++ ++P+Y T GVL AC+ G ++
Sbjct: 246 KMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKE 305
Query: 251 GVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSG 307
G W R + +P+L ++D+ + G + +A M K + ++W ++
Sbjct: 306 G-WDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGA 364
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGN 334
+ + +A V ++ K NG+
Sbjct: 365 CVNHNNLGLAEKVKAKISKISSSQNGD 391
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/534 (40%), Positives = 325/534 (60%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+N +V G L A+KVFD++ ++NV +W A++SG I E + +FR + G PD
Sbjct: 29 LINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPD 88
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
F++ VL C L K +H YV + G N+ V +SL +Y K G++ + +V
Sbjct: 89 EFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIK 148
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
M +++V+W+++I G A NG + LD++ M+ L+P+ T+V V+S+ A L L
Sbjct: 149 AMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQ 208
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + + S + ++LI MY+KCG + + K + + D V+W+++++
Sbjct: 209 GQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGF 268
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+G + A +F Q+E+ G+ N TF+ LL C+H GL ++G FF M + L P +E
Sbjct: 269 HGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLE 328
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
HY C+VDLLGRSG LDEA +I+SMP+E + ++W LL+ CR+H+ D+A +++ L
Sbjct: 329 HYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRL 388
Query: 431 EPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNS 490
P +S YVLLSNI++++ +W D +K+R+ M D+ ++K G SW+EV V +F +GD S
Sbjct: 389 NPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKS 448
Query: 491 HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTA 550
HP+SE+I L EL ++K G+VP T V D + EEK+ L HSEKLA+AFGL+
Sbjct: 449 HPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIP 508
Query: 551 PKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P IR+ KNLR+C DCH AIKLIS I REIIVRD +RFH F G CSC D+W
Sbjct: 509 PGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 157/310 (50%), Gaps = 4/310 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G + + ++ + + M GFLP FT VL+ CA G + H+ ++K G
Sbjct: 60 MVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYG 119
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + V +SL ++Y+ G L + KV + +NVV+W +I+G G+ E ++++
Sbjct: 120 YEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYN 179
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GL+PD ++V V+++ +L L + IH +AG V V +SL+ +Y+KCG
Sbjct: 180 MMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCG 239
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E + + D V WSSMI Y +G +EA+ +F M++E L T + +L
Sbjct: 240 CLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLY 299
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G E G+ M L P L T ++D+ + G + +A + R M + D
Sbjct: 300 ACSHNGLKEKGMGFFKLMVEKYGL-KPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEAD 358
Query: 298 QVVWNAVVSG 307
V+W ++S
Sbjct: 359 VVIWKTLLSA 368
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 146/295 (49%), Gaps = 21/295 (7%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
RN+ L++ + + G+++ A +VFD+M E+++ +W++M+ G F + L +F M
Sbjct: 21 RNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREM 80
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
P+ +T+ VL CA L A G +++ + + N V+G++L MY K G +
Sbjct: 81 HELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSL 140
Query: 284 AQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
+ KV + M+ ++ V WN +++G + NG+ + ++ ++ G++P+ T V ++
Sbjct: 141 GEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSS 200
Query: 344 THAGLVDEGRQFF---------NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
+ +G+Q ++++ + SL M GC+ D + LD H
Sbjct: 201 AELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSM--KALLDCEH----- 253
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
P++++W +++A H + + A H+ Q+ E + LS +Y+ SH
Sbjct: 254 ----PDSVLWSSMIAAYGFHGRGEEAVHLFEQM-EQEGLGGNDVTFLSLLYACSH 303
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/606 (37%), Positives = 350/606 (57%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G N A+ + +MR G PT F +A A L RS + G
Sbjct: 243 LVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARA-AAALGAPLRARSCTASASVG 301
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + FV ++L ++Y CG L++A +VFD +P K+ V+WTA+I GY G+LE A+ FR
Sbjct: 302 FDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFR 361
Query: 121 RLLHRGL-KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ GL D VL+A L D +K IH V +AG V V +L+D+YAK
Sbjct: 362 DMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKS 421
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
++E A RV P ++VS +SMI GY +EAL ++ ++R+ ++P +T +
Sbjct: 422 MDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSM 481
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+ CA LE G + + + + + + +G+TL+DMY KCG ++ + ++F E++ +
Sbjct: 482 IKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD 541
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ WNAV++ + +G+ + A F ++ GI+PN FV LL C+HAGLVDEG ++F S
Sbjct: 542 IAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYS 601
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + P EHY C++D GR+G+LDEA++ I MP++PNA W +LL CR+ +
Sbjct: 602 MKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKE 661
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E L+ LEP N+G +V LS IY++ +W D +R +M D I+K+ G SWV+ +
Sbjct: 662 LGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSN 721
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
H F D SHP + IY KL+EL T++K G++P T + ++E+ K+ L HSE
Sbjct: 722 KKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSE 781
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
++A+AF LI+ I + KNLR+C DCH A K I K+ R+IIVRDN+RFH F+ G C
Sbjct: 782 RIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRC 841
Query: 599 SCKDFW 604
SC D+W
Sbjct: 842 SCGDYW 847
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 199/395 (50%), Gaps = 30/395 (7%)
Query: 29 TNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC-DEFVKTSLLNLYVHCGYLADALKV 87
T +L++C R D + G H+ +V +G F+ L+ +Y HC LA AL++
Sbjct: 169 TTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRL 228
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLKPDSFSIVRVLTACTQLGD 146
F +P +N VSWT ++SG +++ + + R G+ P F++ A LG
Sbjct: 229 FAAMPRRNAVSWTTLVSG-LSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGA 287
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
A+ + G +FVA++L D+Y+KCG + +A RVFDQMP+KD V+W++MI G
Sbjct: 288 PLRARSCTASAS-VGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDG 346
Query: 207 YASNGFPKEALDMFYNMQRENL-KPEYYTMVGVLSACASLGALELGVWASSF---MERNE 262
YA NG + A+ F +M+RE L + + VLSA G L+ G + S + +
Sbjct: 347 YAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSAS---GGLKDGWLSKSIHCCVTKAG 403
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM-NGYVKV----- 316
F + LIDMYAK + A +V + D WN VVSG SM +GY++
Sbjct: 404 FELEVAVRNALIDMYAKSMDVESASRVLK----IDPGGWN-VVSGTSMIDGYIETDCVEE 458
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY---G 373
A ++ +L + G++PN TF ++ GC L+++G Q + + T +I
Sbjct: 459 ALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIK----TDLIRDSFVGS 514
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
+VD+ G+ G + + +L + + I W A++
Sbjct: 515 TLVDMYGKCGLISLSMQLFNEIEYRTD-IAWNAVI 548
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/500 (22%), Positives = 203/500 (40%), Gaps = 116/500 (23%)
Query: 29 TNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC-DEFVKTSLLNLYVHCGYLADALKV 87
T +L++C R D + G H+ +V +G F+ L+ +Y HC LA AL++
Sbjct: 19 TTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRL 78
Query: 88 FDDIPDKNVVSWTAIISGY---------------INEGNLEEAINMFRRLLHRGLKPD-- 130
F +P +N VSWT ++SG + + ++ H L P
Sbjct: 79 FAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHT 138
Query: 131 -------------------------------SFSIVRVLTACTQLGDLSTAKWIHGYVNE 159
+ + +L +C + GDL + +H +
Sbjct: 139 LAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVL 198
Query: 160 AGKGR-NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALD 218
+G + F+A L+ +Y+ C ++ A R+F MP ++ VSW++++ G + N +AL
Sbjct: 199 SGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALA 258
Query: 219 MFYNMQRENLKPEYYTMVGVL---------------SACASLGALELGVWASSFMERNEF 263
F M+R + P + + +A AS+G F
Sbjct: 259 AFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVG----------------F 302
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ + + L DMY+KCG +++AC+VF +M KD V W A++ G + NG ++ A F
Sbjct: 303 DTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRD 362
Query: 324 LEKCG-IQPNGNTFVGLL----------------CGCTHAG----------LVDEGRQFF 356
+++ G + + + F +L C T AG L+D +
Sbjct: 363 MKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSM 422
Query: 357 N--SMSRVFSLTP---MIEHYGCMVDLLGRSGQLDEA---HELIKSMPMEPNAIVWGALL 408
+ S SRV + P + M+D + ++EA + ++ +EPN + +++
Sbjct: 423 DVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMI 482
Query: 409 AGCRLHKKTDLAEHVLNQLI 428
GC + + + Q+I
Sbjct: 483 KGCAMQALLEQGAQLHAQVI 502
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/518 (41%), Positives = 327/518 (63%), Gaps = 5/518 (0%)
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR--GLKPDSFSIVRVLTACTQLGDLS 148
+P++++V+W ++ISGY G L + + R++ G +P+ + + +++AC G+
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
IHG V ++G V V +L++LY K G++ + ++F+ + K++VSW++MI +
Sbjct: 61 EGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHL 120
Query: 209 SNGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
NG +E L ++NM R LKP+ T + VL C +G + L + F +N
Sbjct: 121 QNGLAEEGL-AYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANT 179
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ T L+D+YAK GR+ + VF E+ D + W A+++ + +GY + A F +
Sbjct: 180 CITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHY 239
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G+ P+ TF LL C+H+GLV+EGR +F +MS+ + + P ++HY CMVDL+GRSG L +
Sbjct: 240 GLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQD 299
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A+ LIK MPMEP++ VWGALL CR++K T L +L LEP + NY++LSNIYSA
Sbjct: 300 AYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSA 359
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
S W DA++IR++M KG+ + G S++E +H+F+VGD SHP SEKI KL E+ K
Sbjct: 360 SGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKK 419
Query: 508 LKAA-GFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
+K+ GF T+ VL D++E+ K+ + HSEK+A+AFGL+ +P + I I KNLR+CGD
Sbjct: 420 MKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLVISPMEPIIIRKNLRICGD 479
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CHE K IS I R II+RD+ RFH F+EGSCSC+D+W
Sbjct: 480 CHETAKAISLIEKRRIIIRDSKRFHHFLEGSCSCRDYW 517
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 183/364 (50%), Gaps = 12/364 (3%)
Query: 3 RGFVSNDCFQHAIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
RG++ CF+ MR+E GF P TF ++ AC + + GV H L++K+G+
Sbjct: 19 RGYLGK-CFE---VLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGV 74
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
+ V +L+NLY G L + K+F+D+ KN+VSW +I ++ G EE + F
Sbjct: 75 LEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNM 134
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
GLKPD + + VL C +G + ++ IHG + G N + T+L+DLYAK G
Sbjct: 135 SRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGR 194
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+E + VF ++ D ++W++M+ YA++G+ ++A+ F M L P++ T +L+A
Sbjct: 195 LEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNA 254
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
C+ G +E G + M + + P L + ++D+ + G + A + +EM +
Sbjct: 255 CSHSGLVEEGRYYFETMSKR-YRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSS 313
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFFN 357
VW A++ + Y G ++P +G ++ L + +GL + + N
Sbjct: 314 GVWGALLGACRV--YKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRN 371
Query: 358 SMSR 361
M +
Sbjct: 372 LMKQ 375
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + N + + ++N R G P TF VL+ C +L H LI+ G
Sbjct: 115 MIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCG 174
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + + T+LL+LY G L D+ VF +I + ++WTA+++ Y G +AI F
Sbjct: 175 FNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFE 234
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA----TSLVDLY 176
++H GL PD + +L AC+ G + ++ Y K + + +VDL
Sbjct: 235 LMVHYGLSPDHVTFTHLLNACSHSGLVEEGRY---YFETMSKRYRIEPRLDHYSCMVDLM 291
Query: 177 AKCGNMEKARRVFDQMP 193
+ G ++ A + +MP
Sbjct: 292 GRSGLLQDAYGLIKEMP 308
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/549 (41%), Positives = 327/549 (59%), Gaps = 9/549 (1%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D F+ T L+ Y G L A +VFD+ P KN+ W A++ + +EA+ +
Sbjct: 107 DPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLADMG 166
Query: 124 HRGLKPDSFSIVRVLTACTQLGDL-----STAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
G+ DS+S L AC + + + +H + G + VAT+L+D YAK
Sbjct: 167 RLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDCYAK 226
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN--LKPEYYTMV 236
G + A VF MPE+++VSWS+MI YA N P +A+++F +M + L P T+V
Sbjct: 227 LGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSITIV 286
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM-KD 295
VL+ACA + AL G +++ R F S + L+ MY +CG + +F+ +
Sbjct: 287 SVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHR 346
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+D V WN+++SG M+G+ A VF ++ G P+ TF+ +L C+HAGLV+EG+
Sbjct: 347 RDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEGKML 406
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F SM + +TP EHY CMVDLLGR+GQLDEA ELI+SM +EP+ VWGALL CR+H
Sbjct: 407 FESMVE-YGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACRIHG 465
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
+ AE + L LEP N+GNYVLL++IY+ + N ++ ++ + ++K+ GCSW+
Sbjct: 466 HVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEEHALEKVTGCSWI 525
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
EV +H F DN +P E++ + + E ++K G+VP T VL+DIE EEK+ L
Sbjct: 526 EVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLYDIEGEEKERILIG 585
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+AFGLI T +VIRI KNLR+C DCH K ISK T REI+VRD NRFH F +
Sbjct: 586 HSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREIVVRDVNRFHHFRD 645
Query: 596 GSCSCKDFW 604
G CSC D+W
Sbjct: 646 GVCSCGDYW 654
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 3/195 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI + N+ AIE + M + +P + T VL ACA + G H+ I++
Sbjct: 251 MIGCYAKNERPADAIELFKDMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILR 310
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD-KNVVSWTAIISGYINEGNLEEAIN 117
G D V +L+ +Y+ CG L +F I ++VVSW ++ISGY G EA+
Sbjct: 311 RGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQ 370
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+F ++H G P + + VL AC+ G ++ K + + E G +VDL
Sbjct: 371 VFEEMIHVGFSPSIITFISVLGACSHAGLVNEGKMLFESMVEYGVTPRAEHYACMVDLLG 430
Query: 178 KCGNMEKARRVFDQM 192
+ G +++A + M
Sbjct: 431 RAGQLDEAMELIRSM 445
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/635 (35%), Positives = 351/635 (55%), Gaps = 31/635 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I G+ + A++ YN+M ++ T T +LK + LG + H ++K
Sbjct: 106 LIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKL 165
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV---------------------- 97
G + V + LL++Y G ++DA KVF + D+N V
Sbjct: 166 GFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLF 225
Query: 98 --------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
SW+A+I G G +EAI FR + GLK D + VL AC LG ++
Sbjct: 226 RGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAIND 285
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ IH + +++V ++L+D+Y KC + A+ VFD+M +K++VSW++M+ GY
Sbjct: 286 GRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 345
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
G EA+ +F +MQR + P++YT+ +SACA++ +LE G + +
Sbjct: 346 TGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITV 405
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
+L+ +Y KCG + + ++F EM +D+V W A+VS + G A +F ++ + G+
Sbjct: 406 SNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGL 465
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+P+G T G++ C+ AGLV++G+++F M + + P HY CM+DL RSG+++EA
Sbjct: 466 KPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAM 525
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
I MP P+AI W LL+ CR ++ + LI L+P + Y LLS+IY++
Sbjct: 526 GFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKG 585
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
KW+ A++R M +K ++K G SW++ G +H F D S P S++IY+KL+EL K+
Sbjct: 586 KWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKII 645
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
G+ P T V D+EE K L CHSE+LA+AFGLI IR+ KNLRVC DCH
Sbjct: 646 DNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHN 705
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A K IS +TGREI+VRD RFH F +G+CSC DFW
Sbjct: 706 ATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 740
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 196/422 (46%), Gaps = 53/422 (12%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F +LL Y G+L++ + F+ +PD++ V+W +I GY G + A+ + ++
Sbjct: 70 FSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM-- 127
Query: 126 GLKPDSFSIVRV-----LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK-- 178
K S ++ RV L + G +S K IHG V + G + V + L+D+Y+K
Sbjct: 128 --KDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVG 185
Query: 179 -----------------------------CGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
CG +E A ++F M EKD VSWS+MI+G A
Sbjct: 186 CISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQ 244
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
NG KEA++ F M+ E LK + Y VL AC LGA+ G + + R + +
Sbjct: 245 NGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYV 304
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
G+ LIDMY KC + A VF MK K+ V W A+V G G A +F +++ GI
Sbjct: 305 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGI 364
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY----GCMVDLLGRSGQL 385
P+ T + C + ++EG QF ++T + HY +V L G+ G +
Sbjct: 365 DPDHYTLGQAISACANISSLEEGSQFHGK-----AITAGLIHYITVSNSLVTLYGKCGDI 419
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
D++ L M + + + W A+++ + A + ++++ L G V L+ +
Sbjct: 420 DDSTRLFNEMNVR-DEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDG--VTLTGVI 476
Query: 446 SA 447
SA
Sbjct: 477 SA 478
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 132/277 (47%), Gaps = 33/277 (11%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
N+F +L+ Y+K G++ + R F+++P++D V+W+ +I+GY+ +G A+ + M
Sbjct: 68 NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 127
Query: 225 RE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
++ + T++ +L +S G + LG + + F S ++G+ L+DMY+K G +
Sbjct: 128 KDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCI 187
Query: 284 AQACKVFREMKD------------------------------KDQVVWNAVVSGLSMNGY 313
+ A KVF + D KD V W+A++ GL+ NG
Sbjct: 188 SDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGM 247
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
K A F +++ G++ + F +L C G +++GRQ + R +L I
Sbjct: 248 EKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRT-NLQDHIYVGS 306
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++D+ + L A + M + N + W A++ G
Sbjct: 307 ALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVG 342
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/539 (39%), Positives = 333/539 (61%), Gaps = 3/539 (0%)
Query: 68 KTSLLNLY-VHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 126
++ LL LY + G L+ A+ F I + W AII G+I N A ++ ++ +
Sbjct: 41 RSKLLELYALSLGNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKS 100
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
K D+ + VL AC ++ + IH ++ G + + T+L+D+YAK G ++ A
Sbjct: 101 RKVDALTCSFVLKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAE 160
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
+VFD+M ++DI SW+++I G+A P EAL +F M+ + KP +++G LSACA LG
Sbjct: 161 KVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLG 220
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
+ G +++ F N + +IDMYAKCG + +A VF M KD V WN ++
Sbjct: 221 DFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMI 280
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
+M+G A +F ++++ G+ P+ +++ +LC C H GLV+EG + FNSM +
Sbjct: 281 MAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENC-GV 339
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
P ++HYG +VDLLGR+G+L EA++++ SMP P+ ++W LL R H+ ++AE V
Sbjct: 340 KPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSR 399
Query: 426 QLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFL 485
+L+ + + G++VLLSN+Y+A +W D ++R M ++ ++K+ G S++E +GV+H+F
Sbjct: 400 KLVEMGSNHCGDFVLLSNVYAARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFY 459
Query: 486 VGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFG 545
D SH +IY+KLDE+ ++K G+V T VL DI EE+K+ L HSEKLA+AFG
Sbjct: 460 NADKSHESWREIYAKLDEIRFRVKEYGYVAETSFVLHDIGEEDKENVLGHHSEKLAVAFG 519
Query: 546 LITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LI+T+ I++ KNLR+CGDCH IKLISKI REIIVRD RFH F EG CSC+D+W
Sbjct: 520 LISTSEGTPIQVIKNLRICGDCHFVIKLISKIYDREIIVRDRVRFHRFKEGFCSCRDYW 578
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 180/336 (53%), Gaps = 2/336 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRGF+ + +A +Y SM ++ T FVLKACAR ++ H+ IV+ G
Sbjct: 76 IIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQIHTHIVRKG 135
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + T+LL++Y G + A KVFD++ +++ SW A+ISG+ EA+++F+
Sbjct: 136 FIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFK 195
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G KP+ S++ L+AC QLGD + IHGY+ N V ++D+YAKCG
Sbjct: 196 RMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCG 255
Query: 181 NMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++KA VF+ M KDIV+W++MI +A +G +AL++F M + + P+ + + VL
Sbjct: 256 FVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVL 315
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD-KDQ 298
AC G +E G + ME N +++D+ + GR+ +A + M D
Sbjct: 316 CACNHGGLVEEGFRLFNSMENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDI 375
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
V+W ++ + V++A V +L + G G+
Sbjct: 376 VLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGD 411
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/606 (38%), Positives = 352/606 (58%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI VS + AIE Y++M EG LP +TF + KA + + G ++H L V G
Sbjct: 72 MISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLG 131
Query: 61 LDC-DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ D FV T ++++Y G + DA VFD + DK+VV +TA+I GY G EA+ +F
Sbjct: 132 FEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVF 191
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ +KP+ +++ VL +C LGDL K IHG V ++G V TSL+ +Y+KC
Sbjct: 192 EDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKC 251
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+E + +VF+ + V+W+S I G NG + AL MF M R ++ P ++T +L
Sbjct: 252 NMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSIL 311
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+SL LE G + + N + LI +Y KCG + +A VF + + D V
Sbjct: 312 HACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVV 371
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
N ++ + NG+ A +F +++K G +PN TF+ +L C +AGLV+EG Q F+ +
Sbjct: 372 SINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLI 431
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
S+ +HY CM+DLLGR+ + +EA LI+ P+ I W LL C++H + ++
Sbjct: 432 RNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEE-GKNPDVIQWRTLLNACKIHGEVEM 490
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE + +++ P + G ++LL+NIY+++ KW++ +++S D ++K SWV++D
Sbjct: 491 AEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDR 550
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F+ GD SHP + +I L EL K+ G+ P T VL D+EEE+K L HSEK
Sbjct: 551 EVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEK 610
Query: 540 LALAFGLITTAPKDV-IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
LA+AF L T K+ IRI KNLRVCGDCH IK +S +TGR+II RD RFH F G C
Sbjct: 611 LAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGIC 670
Query: 599 SCKDFW 604
SCKD+W
Sbjct: 671 SCKDYW 676
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 192/345 (55%), Gaps = 3/345 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ I+K+G F L++ Y+ C + +A K+FD++P++++V+W ++IS +++ G
Sbjct: 24 HTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKT 82
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-KGRNVFVATS 171
+EAI ++ +L G+ PD+++ + A +++G + HG G + + FVAT
Sbjct: 83 KEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATG 142
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
+VD+YAK G M+ AR VFD++ +KD+V ++++I GY G EAL++F +M +KP
Sbjct: 143 IVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPN 202
Query: 232 YYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
YT+ VL +C +LG L G + ++ S T+L+ MY+KC + + KVF
Sbjct: 203 EYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFN 262
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
+ V W + + GL NG ++A +F ++ +C I PN TF +L C+ +++
Sbjct: 263 SLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEA 322
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
G Q ++++ + ++ L G+ G +++A + +S+
Sbjct: 323 GEQ-IHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLT 366
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 153/307 (49%), Gaps = 6/307 (1%)
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
T L+T K +H ++ ++G + F L+D Y KC + +AR++FD+MP + IV+W+
Sbjct: 12 TNKKSLTTLKSLHTHILKSGSLFSFF-GHKLIDGYIKCSVITEARKLFDEMPNRHIVTWN 70
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
SMI + S G KEA++++ NM E + P+ YT + A + +G G A
Sbjct: 71 SMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVL 130
Query: 262 EF-LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
F +S+ + T ++DMYAK G+M A VF + DKD V++ A++ G + G A V
Sbjct: 131 GFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEV 190
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F + I+PN T +L C + G + G+ + + L ++ ++ +
Sbjct: 191 FEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGK-LIHGLVVKSGLESVVASQTSLLTMYS 249
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
+ ++++ ++ S+ + + W + + G + + ++A + ++I S N+
Sbjct: 250 KCNMVEDSIKVFNSLAYASH-VTWTSFIVGLVQNGREEIALSMFREMIRCSI--SPNHFT 306
Query: 441 LSNIYSA 447
S+I A
Sbjct: 307 FSSILHA 313
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/552 (38%), Positives = 329/552 (59%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H +K DE + + + Y CG L+ A +VF I K + SW A+I GY +
Sbjct: 402 HCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDP 461
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
+++ ++ + GL PD+F++ +L+AC++L L K +HG++ R++FV S+
Sbjct: 462 RLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 521
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ LY CG + + +FD M + +VSW+++I G+ NGFP+ AL +F M ++P
Sbjct: 522 LSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCG 581
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+M+ V AC+ L +L LG A ++ ++ N + ++IDMYAK G + Q+ KVF
Sbjct: 582 ISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNG 641
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
+K+K WNA++ G M+G K A +F ++++ G P+ TF+G+L C H+GL+ EG
Sbjct: 642 LKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEG 701
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
++ + M F L P ++HY C++D+LGR+GQLD A + M EP+ +W +LL+ CR
Sbjct: 702 LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCR 761
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
+H+ ++ E V +L LEP NYVLLSN+Y+ KW+D ++R M + ++K GC
Sbjct: 762 IHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGC 821
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF 532
SW+E++G V F+VG+ E+I S L K+ G+ P T V D+ EEEK
Sbjct: 822 SWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQ 881
Query: 533 LACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
L HSEKLA+ +GLI T+ +R+ KNLR+C DCH A KLISK+ REI+VRDN RFH
Sbjct: 882 LRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHH 941
Query: 593 FIEGSCSCKDFW 604
F +G CSC D+W
Sbjct: 942 FNKGFCSCGDYW 953
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 176/309 (56%), Gaps = 4/309 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + + +++ + M+N G LP NFT +L AC++ +LG H I++
Sbjct: 451 LIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 510
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV S+L+LY+HCG L +FD + D ++VSW +I+G++ G E A+ +FR
Sbjct: 511 LERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFR 570
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ G++P S++ V AC+ L L + H Y + N F+A S++D+YAK G
Sbjct: 571 QMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNG 630
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ ++ +VF+ + EK SW++MI GY +G KEA+ +F MQR P+ T +GVL+
Sbjct: 631 AITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLT 690
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDKDQ 298
AC G L G+ M ++ F P L +IDM + G++ A +V EM ++
Sbjct: 691 ACNHSGLLHEGLRYLDQM-KSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPD 749
Query: 299 V-VWNAVVS 306
V +WN+++S
Sbjct: 750 VGIWNSLLS 758
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 212/428 (49%), Gaps = 22/428 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I + N+ + +E + M ++ LP NFTFP V+KACA D +G+ H L+VK
Sbjct: 157 VISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKT 216
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL D FV +L++ Y G+++DALK+FD +P++N+VSW ++I + + G+
Sbjct: 217 GLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD-------- 268
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
PD ++V VL C + ++ K +HG+ + + + V +L+D+Y+K
Sbjct: 269 ----DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKW 324
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM--QRENLKPEYYTMVG 237
G + ++ +F K++VSW++M+ G+++ G D+ M E++K + T++
Sbjct: 325 GCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILN 384
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+ C L + + EF+ + +L + YAKCG ++ A +VF ++ K
Sbjct: 385 AVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKT 444
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
WNA++ G + + +++ Q++ G+ P+ T LL C+ + G++
Sbjct: 445 LNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHG 504
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIV-WGALLAGCRLHKK 416
+ R + L + Y ++ L G+L L + ME N++V W ++ G H +
Sbjct: 505 FIIRNW-LERDLFVYLSVLSLYIHCGELCTVQVLFDA--MEDNSLVSWNTVITG---HLQ 558
Query: 417 TDLAEHVL 424
E L
Sbjct: 559 NGFPERAL 566
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 146/301 (48%), Gaps = 14/301 (4%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG-LDCDEFVKTSLLNLYVHCGYLADA 84
FL +L+A + D ++G + H L+ + L D+ + T ++ +Y CG D+
Sbjct: 80 FLLVREALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDS 139
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQ 143
FD + KN+ W A+IS Y E + MF +++ + L PD+F+ V+ AC
Sbjct: 140 RSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAG 199
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+ D+ +HG V + G ++FV +LV Y G + A ++FD MPE+++VSW+SM
Sbjct: 200 ISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSM 259
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I+ ++ NG P+ T+V VL CA + +G + +
Sbjct: 260 IRVFSDNG------------DDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSL 307
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
V+ L+DMY+K G + + +F+ +K+ V WN +V G S G + F + Q
Sbjct: 308 DKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQ 367
Query: 324 L 324
+
Sbjct: 368 M 368
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 149/343 (43%), Gaps = 44/343 (12%)
Query: 103 ISGYINEGNLEEAINMFRRLL-HRGLKPDSFSIVR-----VLTACTQLGDLSTAKWIHGY 156
IS + G+L+++ + + D F +VR +L A + D+ + IH
Sbjct: 50 ISNFCETGDLDKSFRVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHL 109
Query: 157 VNEAGKGR-NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
V+ + + R + + T ++ +YA CG+ + +R FD + K++ W+++I Y+ N E
Sbjct: 110 VSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHE 169
Query: 216 ALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
L+MF M + +L P+ +T V+ ACA + + +G+ + + + + +G L+
Sbjct: 170 VLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALV 229
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
Y G ++ A K+F M +++ V WN+++ S NG + P+
Sbjct: 230 SFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG------------DDGAFMPDVA 277
Query: 335 TFVGLLCGCTHAGLVDEGRQFFN-----SMSRVF----SLTPMIEHYGCMVDLLGRSGQL 385
T V +L C + G+ S+ + +L M +GC++D
Sbjct: 278 TVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIID-------- 329
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCR----LHKKTDLAEHVL 424
++I + N + W ++ G +H DL +L
Sbjct: 330 ---SQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQML 369
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/609 (36%), Positives = 333/609 (54%), Gaps = 32/609 (5%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P T+ +++ C++ + G + H I +G + LL +Y CG L DA KV
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR---------------------- 125
FD++P++++ SW +++GY G LEEA +F + +
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 126 ----------GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+P+ F++ + A + + K IHG++ AG + + +SL+D+
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y KCG +++AR +FD++ EKD+VSW+SMI Y + +E +F + +P YT
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
GVL+ACA L ELG +M R F ++L+DMY KCG + A V
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK 382
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
D V W +++ G + NG A F L K G +P+ TFV +L CTHAGLV++G +F
Sbjct: 383 PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 442
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F S++ L+ +HY C+VDLL RSG+ ++ +I MPM+P+ +W ++L GC +
Sbjct: 443 FYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYG 502
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
DLAE +L +EP N YV ++NIY+A+ KW + K+R M + G+ K G SW
Sbjct: 503 NIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWT 562
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
E+ H F+ D SHP+ +I L EL K+K G+VP T VL D+E+E+K+ L
Sbjct: 563 EIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVY 622
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+AF +++T I++ KNLR C DCH AIK IS IT R+I VRD+ RFHCF
Sbjct: 623 HSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFEN 682
Query: 596 GSCSCKDFW 604
G CSC D+W
Sbjct: 683 GQCSCGDYW 691
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 189/366 (51%), Gaps = 6/366 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+ G+V D + A+ Y+ M R P FT + A A + G H IV+A
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD DE + +SL+++Y CG + +A +FD I +K+VVSWT++I Y E ++F
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
L+ +P+ ++ VL AC L K +HGY+ G F ++SLVD+Y KC
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+E A+ V D P+ D+VSW+S+I G A NG P EAL F + + KP++ T V VL
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 240 SACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-D 297
SAC G +E G+ + S E++ T L+D+ A+ GR Q V EM K
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFF 356
+ +W +V+ G S G + +A +L K I+P N T+V + AG +E +
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEEEGKMR 545
Query: 357 NSMSRV 362
M +
Sbjct: 546 KRMQEI 551
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 175/368 (47%), Gaps = 40/368 (10%)
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
L EA+ +LL R KP + + ++ C+Q L K +H ++ +G + +
Sbjct: 70 LREAV----QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF------------------- 212
L+ +YAKCG++ AR+VFD+MP +D+ SW+ M+ GYA G
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSW 185
Query: 213 ------------PKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
P+EAL ++ MQR N +P +T+ ++A A++ + G +
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
R S+ VL ++L+DMY KCG + +A +F ++ +KD V W +++ + + F
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFS 305
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F +L +PN TF G+L C + G+Q M+RV P +VD+
Sbjct: 306 LFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVDMY 364
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
+ G ++ A ++ P +P+ + W +L+ GC + + D A + L L+ ++V
Sbjct: 365 TKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLL--LKSGTKPDHV 421
Query: 440 LLSNIYSA 447
N+ SA
Sbjct: 422 TFVNVLSA 429
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/603 (38%), Positives = 347/603 (57%), Gaps = 14/603 (2%)
Query: 10 CFQHAIEFYNSMRNEGFLPTNFTFP--FVLKACAREHDFQLGVRSHSLIVKAGLDCDEFV 67
C H + N+ L F +LK C +F+ + H+ I+K GL D F
Sbjct: 8 CQSHFLSLPNNPPQSSELNAKFNVQGLSLLKRCKSMEEFK---QVHAHILKLGLFYDSFC 64
Query: 68 KTSLLNLYVHC-----GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL 122
+ NL C G + A +F I + + +I G +N NLEEA+ ++ +
Sbjct: 65 GS---NLVATCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEM 121
Query: 123 LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
L RG++PD+F+ VL AC+ LG L IH +V +AG +VFV L+++Y KCG +
Sbjct: 122 LERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAGLEGDVFVQNGLINMYGKCGAI 181
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL-KPEYYTMVGVLSA 241
E A VF+QM EK + SWSS+I +AS E L + +M E + E +V LSA
Sbjct: 182 EHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSA 241
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C LG+ G + RN N + T+LIDMY K G + + VF+ M K++ +
Sbjct: 242 CTHLGSPNFGRCIHGILLRNISELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSY 301
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
+++GL+++G + A VF + + G+ P+ +VG+L C+HAGLV+EG Q FN +
Sbjct: 302 TVIITGLAIHGRGREALSVFSDMLEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFNRLQF 361
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+ P I+HYGCMVDL+GR+G L A++LIKSMP++PN +VW +LL+ C++H ++ E
Sbjct: 362 EHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGE 421
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
+ L N G+Y++L+N+Y+ + KW D A+IR+ M +K + + G S VE + V
Sbjct: 422 IAAENIFKLNQHNPGDYLVLANMYARAKKWADVARIRTEMAEKHLVQTPGFSLVEANRNV 481
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
++F+ D S P E IY + ++ +LK G+ P VL D++E+EK+ L HS+KLA
Sbjct: 482 YKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLA 541
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+AF LI T+ IRI++N+R+C DCH K IS I REI VRD NRFH F +G+CSCK
Sbjct: 542 IAFALIQTSEGSRIRISRNIRMCNDCHTYTKFISVIYEREITVRDRNRFHHFKDGTCSCK 601
Query: 602 DFW 604
D+W
Sbjct: 602 DYW 604
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 174/321 (54%), Gaps = 5/321 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG V++ + A+ Y M G P NFT+PFVLKAC+ + GV+ H+ + KAG
Sbjct: 101 MIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAG 160
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+ L+N+Y CG + A VF+ + +K+V SW++II + + E + +
Sbjct: 161 LEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLG 220
Query: 121 RLLHRGLKPDSFSI-VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G SI V L+ACT LG + + IHG + NV V TSL+D+Y K
Sbjct: 221 DMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTSLIDMYVKS 280
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++EK VF M +K+ S++ +I G A +G +EAL +F +M E L P+ VGVL
Sbjct: 281 GSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVVYVGVL 340
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK- 296
SAC+ G + G+ + ++ E P + ++D+ + G + A + + M K
Sbjct: 341 SACSHAGLVNEGLQCFNRLQF-EHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKP 399
Query: 297 DQVVWNAVVSGLSMNGYVKVA 317
+ VVW +++S ++ +++
Sbjct: 400 NDVVWRSLLSACKVHHNLEIG 420
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/524 (41%), Positives = 316/524 (60%), Gaps = 5/524 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M R + + I YN M G LP N++FPFVLKACAR G HS +K G
Sbjct: 98 MFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLG 157
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINM 118
+ D FV+ +L++ + CG + A VFD +P ++VVSW ++ISGY+ E A+ +
Sbjct: 158 VHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKV 217
Query: 119 FRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
F LL G L PD ++V L+ C +LG L K IHG +G +VFV +SL+D+Y+
Sbjct: 218 FWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYS 277
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCG +E AR+VFD++P ++ V W+SMI GYA + KEA+++F MQ + T+
Sbjct: 278 KCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIAC 337
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
VLSAC GAL G W + ERN + LI MY+KCG + +A ++F + D
Sbjct: 338 VLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPD 397
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
W+AV+SGL+MNG A +F Q+E I+PN TF+G+LC C H G VD+G +F
Sbjct: 398 IFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYF 457
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
N+M+++++LTP IEHYGCMVDLLGR+ L EA + I+++P++P+ ++W +LL CR H
Sbjct: 458 NAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGN 517
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
+LAE Q+ LEP G VLLSN+Y+++ +W D ++R M + I+K GCS+VE
Sbjct: 518 IELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVE 577
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP-TTDH 519
+DG+VHE V D SHP IY + + L++ GF P DH
Sbjct: 578 IDGLVHELFVADRSHPEMGAIYETMISINKALQSKGFDPGILDH 621
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 196/382 (51%), Gaps = 8/382 (2%)
Query: 50 VRSHSLIVKAGLDCDEFVKTSLLNLYV-HCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
+ SH+ + +G+ D V + LL + H A + +F I NV SW + Y
Sbjct: 47 ILSHA--IASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRAYSR 104
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
E I ++ +L G PD++S VL AC +L L + IH + G +VFV
Sbjct: 105 SSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFV 164
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPE--KDIVSWSSMIQGYASNGFPKEALDMFYNMQRE 226
+L+ ++ CG +E AR VFD +P +D+VSW+SMI GY + + AL +F+ + +
Sbjct: 165 QNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGD 224
Query: 227 -NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ 285
+L P+ T+V LS C LG L+LG + F+ + +G++LIDMY+KCG++
Sbjct: 225 GSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIED 284
Query: 286 ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTH 345
A KVF + ++ V W ++++G + + K A +F +++ G + T +L C H
Sbjct: 285 ARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGH 344
Query: 346 AGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
G + +GR R S+ + ++ + + G + +A E+ + +P+ W
Sbjct: 345 WGALAQGRWIHLYCERN-SIEMDLNARNALIGMYSKCGDIQKALEIFHGL-TQPDIFSWS 402
Query: 406 ALLAGCRLHKKTDLAEHVLNQL 427
A+++G ++ ++D A H+ +Q+
Sbjct: 403 AVISGLAMNGESDKALHLFSQM 424
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/441 (47%), Positives = 291/441 (65%), Gaps = 2/441 (0%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+V T++V A G + AR +FD MP++D V+W++MI GY G +EAL +F M+
Sbjct: 260 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 319
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
T+V L+ACA LGALE G W S + LGT LIDMY+KCG +A
Sbjct: 320 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 379
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A +VF M +++ W + VSGL+MNG + +F ++E G++PNG TFV +L GC+
Sbjct: 380 AAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCS 439
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
AGLVDEGR F+SM + P +EHYGCMVDL GR+G+LD+A I MP+EP+ VW
Sbjct: 440 MAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVW 499
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
GALL R+HK +L ++ +++L+A+E N +VLLSNIY+ S W + +R+MM K
Sbjct: 500 GALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAK 559
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
G++K+ GCS +EV G VHEF VG +HP ++I L E+ +L+ G++ T VLFDI
Sbjct: 560 GVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDI 619
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDV-IRIAKNLRVCGDCHEAIKLISKITGREII 583
EEE+K+ ++ HSEKLA+AFGL+ P+D+ IRI KNLRVC DCH+ K+ISK+ REI+
Sbjct: 620 EEEDKEDAISLHSEKLAIAFGLVAL-PEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIV 678
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
+RD NRFH F +G+CSCKD+W
Sbjct: 679 MRDRNRFHHFKDGACSCKDYW 699
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 135/251 (53%), Gaps = 4/251 (1%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T+++ G A ++FD +P ++ V+W A+I+GY++ G EA+ +F + H G
Sbjct: 265 TAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAA 324
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
++V LTAC QLG L KW+H + G +V + T+L+D+Y+KCG + A V
Sbjct: 325 VGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEV 384
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD M E+++ +W+S + G A NG ++ L +F M+ ++P T V VL C+ G +
Sbjct: 385 FDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLV 444
Query: 249 ELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
+ G M+ N + +P L ++D+Y + GR+ A M + + VW A++
Sbjct: 445 DEGRACFDSMKSNHGI-DPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 503
Query: 306 SGLSMNGYVKV 316
+ ++ V++
Sbjct: 504 NASRIHKNVEL 514
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 113/233 (48%), Gaps = 7/233 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V + A+ ++ MR+ G T L ACA+ + G HS G
Sbjct: 298 MIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRG 357
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + T+L+++Y CG +A A++VFD + ++NV +WT+ +SG G + + +F+
Sbjct: 358 MRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFK 417
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA--TSLVDLYAK 178
R+ G++P+ + V VL C+ G + + + ++ G + ++ +VDLY +
Sbjct: 418 RMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSM-KSNHGIDPWLEHYGCMVDLYGR 476
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQREN 227
G ++ A + MP E W +++ + + K A+D ++ +N
Sbjct: 477 AGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKN 529
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/494 (40%), Positives = 307/494 (62%), Gaps = 3/494 (0%)
Query: 114 EAINMFRRLLHRGLKPDSFSIVRVLTACTQL-GDLSTAKWIHGYVNEAGKGRNVFVATSL 172
A F +L + P+ F+ +L AC L G H + G + +V+ +L
Sbjct: 109 RAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTL 168
Query: 173 VDLYAKCGN--MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+ +Y+ G + AR VFD+MP++ V+WS+MI GY G +A+++F MQ ++
Sbjct: 169 IHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQA 228
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ T++GVL+A LGALEL W F+ER + L LID AKCG + A VF
Sbjct: 229 DEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVF 288
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M+ + V W +V+ L+M G K A VF +++ G+ P+ F+G+L C+HAG+VD
Sbjct: 289 EGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVD 348
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
EG +F++M + + P IEHYGCMVD+ GR+G ++ A E +++MP++PN ++W +L++
Sbjct: 349 EGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSA 408
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CR H + +L E + L+ P + NY++LSN+++ + +W + ++IR M +GI+K+
Sbjct: 409 CRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVP 468
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
GCS VE+DG VHEF+ GD SHP + IY ++E+A +L+ G + T VL D++EE+K+
Sbjct: 469 GCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKE 528
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L HSEKLA+AF L+ T P +R+ KNLRVC DCH AIK IS++ REI+VRD +RF
Sbjct: 529 GALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRF 588
Query: 591 HCFIEGSCSCKDFW 604
H F +GSCSCKDFW
Sbjct: 589 HRFKDGSCSCKDFW 602
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 177/311 (56%), Gaps = 9/311 (2%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
A F+ M +P FTFPF+LKACA +G+++H+ +K G D++V +L
Sbjct: 109 RAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTL 168
Query: 72 LNLYVHC---GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+++Y C G+L DA VFD +P ++ V+W+A+I GY+ G +A+ +FR + G++
Sbjct: 169 IHMY-SCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQ 227
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
D +++ VL A T LG L A+W+ +V G G++V + +L+D AKCG+++ A V
Sbjct: 228 ADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAV 287
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F+ M ++ +VSW+S+I A G KEA+ +F M+ + P+ +GVL+AC+ G +
Sbjct: 288 FEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMV 347
Query: 249 ELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
+ G M + E+ P + ++DM+ + G + +A + R M + V+W ++V
Sbjct: 348 DEGCGYFDAM-KVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLV 406
Query: 306 SGLSMNGYVKV 316
S +G +++
Sbjct: 407 SACRAHGRLEL 417
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 2/213 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V A+E + M+ G T VL A +L + + G
Sbjct: 201 MIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREG 260
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + +L++ CG + A+ VF+ + ++VVSWT++I EG +EA+ +F
Sbjct: 261 IGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFE 320
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ PD + + VLTAC+ G + + E G + +VD++ +
Sbjct: 321 EMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRA 380
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG 211
G +E+A MP + + V W S++ ++G
Sbjct: 381 GMVERAMEFVRTMPIQPNPVIWRSLVSACRAHG 413
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/605 (37%), Positives = 349/605 (57%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G++ + + ++ + ++ F P T VL+AC D L ++ ++KAG
Sbjct: 279 MICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V+ L+++Y CG + A VF+ + K+ VSW +IISGYI G+L EA+ +F+
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFK 397
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + D + + +++ T+L DL K +H ++G ++ V+ +L+D+YAKCG
Sbjct: 398 MMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCG 457
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + ++F M D V+W+++I G L + M++ + P+ T + L
Sbjct: 458 EVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLP 517
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CASL A LG + R + S +G LI+MY+KCG + + +VF M +D V
Sbjct: 518 MCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++ M G + A F +EK GI P+ F+ ++ C+H+GLVDEG F M
Sbjct: 578 WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + PMIEHY C+VDLL RS ++ +A E I++MP++P+A +W ++L CR + A
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETA 697
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V ++I L P + G +L SN Y+A KW+ + IR + DK I K G SW+EV
Sbjct: 698 ERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKN 757
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC-HSEK 539
VH F GD+S P SE IY L+ L + + G++P V ++EEEE++ L C HSE+
Sbjct: 758 VHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSER 817
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL+ T P +++ KNLRVCGDCHE KLISKI GREI+VRD NRFH F +G+CS
Sbjct: 818 LAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCS 877
Query: 600 CKDFW 604
CKD W
Sbjct: 878 CKDRW 882
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 216/412 (52%), Gaps = 5/412 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR F N F A+EFY +R P +TFP V+KACA D ++G + I+ G
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+++Y G L A +VFD++P +++VSW ++ISGY + G EEA+ ++
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L + + PDSF++ VL A L + + +HG+ ++G V V LV +Y K
Sbjct: 197 ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
ARRVFD+M +D VS+++MI GY +E++ MF + KP+ T+ VL
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLR 315
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC L L L + ++M + F+ + LID+YAKCG M A VF M+ KD V
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF-NSM 359
WN+++SG +G + A +F + Q + T++ L+ T + G+ N +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ + + ++D+ + G++ ++ ++ SM + + W +++ C
Sbjct: 436 KSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISAC 484
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 201/387 (51%), Gaps = 8/387 (2%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALK 86
+ T + PF+ +A + + R H+L++ GLD +F L++ Y H A +L
Sbjct: 1 MQTRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLS 60
Query: 87 VFDDI-PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
VF + P KNV W +II + G EA+ + +L + PD ++ V+ AC L
Sbjct: 61 VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D ++ + + G ++FV +LVD+Y++ G + +AR+VFD+MP +D+VSW+S+I
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GY+S+G+ +EAL++++ ++ + P+ +T+ VL A +L ++ G F ++ S
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
V+ L+ MY K R A +VF EM +D V +N ++ G V+ + +F LE
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LE 298
Query: 326 KCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSG 383
+P+ T +L C H + + +N M + F L + + ++D+ + G
Sbjct: 299 NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCG 356
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAG 410
+ A ++ SM + + + W ++++G
Sbjct: 357 DMITARDVFNSMECK-DTVSWNSIISG 382
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/441 (47%), Positives = 291/441 (65%), Gaps = 2/441 (0%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+V T++V A G + AR +FD MP++D V+W++MI GY G +EAL +F M+
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 326
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
T+V L+ACA LGALE G W S + LGT LIDMY+KCG +A
Sbjct: 327 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 386
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A +VF M +++ W + VSGL+MNG + +F ++E G++PNG TFV +L GC+
Sbjct: 387 AAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCS 446
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
AGLVDEGR F+SM + P +EHYGCMVDL GR+G+LD+A I MP+EP+ VW
Sbjct: 447 MAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVW 506
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
GALL R+HK +L ++ +++L+A+E N +VLLSNIY+ S W + +R+MM K
Sbjct: 507 GALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAK 566
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
G++K+ GCS +EV G VHEF VG +HP ++I L E+ +L+ G++ T VLFDI
Sbjct: 567 GVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDI 626
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDV-IRIAKNLRVCGDCHEAIKLISKITGREII 583
EEE+K+ ++ HSEKLA+AFGL+ P+D+ IRI KNLRVC DCH+ K+ISK+ REI+
Sbjct: 627 EEEDKEDAISLHSEKLAIAFGLVAL-PEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIV 685
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
+RD NRFH F +G+CSCKD+W
Sbjct: 686 MRDRNRFHHFKDGACSCKDYW 706
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 135/251 (53%), Gaps = 4/251 (1%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T+++ G A ++FD +P ++ V+W A+I+GY++ G EA+ +F + H G
Sbjct: 272 TAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAA 331
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
++V LTAC QLG L KW+H + G +V + T+L+D+Y+KCG + A V
Sbjct: 332 VGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEV 391
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD M E+++ +W+S + G A NG ++ L +F M+ ++P T V VL C+ G +
Sbjct: 392 FDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLV 451
Query: 249 ELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
+ G M+ N + +P L ++D+Y + GR+ A M + + VW A++
Sbjct: 452 DEGRACFDSMKSNHGI-DPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 510
Query: 306 SGLSMNGYVKV 316
+ ++ V++
Sbjct: 511 NASRIHKNVEL 521
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 113/233 (48%), Gaps = 7/233 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V + A+ ++ MR+ G T L ACA+ + G HS G
Sbjct: 305 MIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRG 364
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + T+L+++Y CG +A A++VFD + ++NV +WT+ +SG G + + +F+
Sbjct: 365 MRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFK 424
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA--TSLVDLYAK 178
R+ G++P+ + V VL C+ G + + + ++ G + ++ +VDLY +
Sbjct: 425 RMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSM-KSNHGIDPWLEHYGCMVDLYGR 483
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQREN 227
G ++ A + MP E W +++ + + K A+D ++ +N
Sbjct: 484 AGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKN 536
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/598 (40%), Positives = 347/598 (58%), Gaps = 10/598 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N CF A+E Y SMR LP +FT L +CA +LG + H +K G
Sbjct: 106 MITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 165
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN-EGNLEEAINMF 119
+D + V +L+ LY GYL + K+F +P+ + VSW +II + E +L EA+ F
Sbjct: 166 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACF 225
Query: 120 RRLLHRGLKPD--SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
L G K + +FS V + G+L K IHG + +L+ Y
Sbjct: 226 LNALRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKYNIADEATTENALIACYG 283
Query: 178 KCGNMEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
KCG M+ ++F +M E+ D V+W+SMI GY N +ALD+ + M + + + +
Sbjct: 284 KCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 343
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VLSA AS+ LE G+ + R S+ V+G+ L+DMY+KCGR+ A + F M +
Sbjct: 344 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 403
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+ WN+++SG + +G + A +F ++ G P+ TFVG+L C+HAGL++EG +
Sbjct: 404 NSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 463
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLH 414
F SMS + L P IEH+ CM DLLGR+G+LD+ + I MP++PN ++W +L A CR +
Sbjct: 464 FESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRAN 523
Query: 415 -KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
+K +L + L LEP N+ NYVLL N+Y+A +W D K R M D ++K G S
Sbjct: 524 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 583
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
WV + VH F+ GD SHP ++ IY KL EL K++ AG+VP T L+D+E+E K+ L
Sbjct: 584 WVTMKDGVHMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEIL 643
Query: 534 ACHSEKLALAFGLITTAPKDV-IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
+ HSEKLA+AF L + IRI KNLRVCGDCH A K ISKI GR+II+RD+NR+
Sbjct: 644 SYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRY 701
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 181/384 (47%), Gaps = 7/384 (1%)
Query: 41 AREHDFQLGVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSW 99
A + + G H ++ GL D + L+N+Y CG +ADA +VF + +K+ VSW
Sbjct: 44 AEQVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSW 103
Query: 100 TAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE 159
++I+G G EA+ ++ + + P SF+++ L++C L + IHG +
Sbjct: 104 NSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 163
Query: 160 AGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN--GFPKEAL 217
G NV V+ +L+ LYA+ G + + R++F MPE D VSW+S+I AS+ P EA+
Sbjct: 164 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLP-EAV 222
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMY 277
F N R K T VLSA +SL ELG + LI Y
Sbjct: 223 ACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACY 282
Query: 278 AKCGRMAQACKVFREMKD-KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
KCG M K+F M + +D V WN+++SG N + A + + + G + + +
Sbjct: 283 GKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMY 342
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
+L ++ G + R L + +VD+ + G+LD A +MP
Sbjct: 343 ATVLSAFASVATLERGMEVHACSVRA-CLESDVVVGSALVDMYSKCGRLDYALRFFNTMP 401
Query: 397 MEPNAIVWGALLAGCRLHKKTDLA 420
+ N+ W ++++G H + + A
Sbjct: 402 VR-NSYSWNSMISGYARHGQGEEA 424
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/605 (36%), Positives = 355/605 (58%), Gaps = 13/605 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF + F+ AI ++ M G +P NFT+ +L AC+ LG + HS +V AG
Sbjct: 288 IISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAG 347
Query: 61 LDCDEFVKTSLLNLYVHCG-YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L+ D V SL+++Y+ C + DA++ F I NV+SWT++I+G+ G EE+I +F
Sbjct: 348 LENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVF 407
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G++P+SF++ +L AC + L+ + +HGY+ + +V V +LVD YA
Sbjct: 408 GAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGL 467
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ A V M +D+++++S+ G + AL++ +M +++++ + +++ L
Sbjct: 468 GMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFL 527
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SA A + +E G + ++ S + L+D+Y KCG + A + F E+ + D V
Sbjct: 528 SAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAV 587
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN ++ GL+ NG+V A F + G++P+ T + +L C+H GLVD G +F SM
Sbjct: 588 SWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSM 647
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ P ++HY C+VDLLGR+G+L+EA +I++MP +P+A+++ LL C+LH L
Sbjct: 648 REKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPL 707
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
EH+ Q + L+P + YVLL+N+Y S + K R MM ++G++K G SW+E
Sbjct: 708 GEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERN 767
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+VH F GD SHP KI+ K++ L + + G I +E + LA HSEK
Sbjct: 768 MVHLFTAGDTSHPQIGKIHEKIESLIAQFRNQG-----------IWYQENRA-LAHHSEK 815
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI+T PK IRI KN+R+C DCH+ I ++++ REIIVRD NRFH F +G CS
Sbjct: 816 LAVAFGLISTPPKAPIRIIKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECS 875
Query: 600 CKDFW 604
C+ +W
Sbjct: 876 CRGYW 880
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 191/333 (57%), Gaps = 2/333 (0%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ A+E ++SM G P FT L++C+ +F G R +L+ K+G D + + ++L
Sbjct: 98 EEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSAL 157
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
++ Y CG +A +VF+ + + ++VSWT ++S ++ G+ +A+ ++ R++ G+ P+
Sbjct: 158 IDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNE 217
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
F+ V++L A + LG L+ K +H ++ N+ + T+LVD+Y KC ++E A +V
Sbjct: 218 FTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKL 276
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
E D+ W+++I G+ + +EA+ F+ M+ + P +T G+L+AC+S+ AL+LG
Sbjct: 277 TLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLG 336
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQ-ACKVFREMKDKDQVVWNAVVSGLSM 310
S + ++ +G +L+DMY KC M + A + FR + + + W ++++G S
Sbjct: 337 KQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSE 396
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC 343
+G + + VFG ++ G++PN T +L C
Sbjct: 397 HGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC 429
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 215/419 (51%), Gaps = 14/419 (3%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G+ HS I+K G D F+ +LL+LY C +A+A ++FD++P ++V SWT ++S Y
Sbjct: 34 GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGK 93
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
GN EEA+ +F +L G P+ F++ L +C+ L + + V ++G N +
Sbjct: 94 IGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVL 153
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
++L+D Y+KCG ++A RVF+ M DIVSW+ M+ + G +AL +++ M + +
Sbjct: 154 GSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGV 213
Query: 229 KPEYYTMVGVLSACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
P +T V +L+A + LG L G V A M R E N VL T L+DMY KC + A
Sbjct: 214 APNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIEL--NLVLKTALVDMYCKCQSIEDA 270
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
KV + + D +W A++SG + + + A F ++E G+ PN T+ G+L C+
Sbjct: 271 VKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSI 330
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR-SGQLDEAHELIKSMPMEPNAIVWG 405
+D G+Q +S + L + +VD+ + S +++A + + PN I W
Sbjct: 331 LALDLGKQ-IHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIA-SPNVISWT 388
Query: 406 ALLAGCRLHKKTDLAEHVLN--QLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMG 462
+L+AG H + + V Q + + P N LS I A + R + G
Sbjct: 389 SLIAGFSEHGLEEESIKVFGAMQGVGVRP----NSFTLSTILGACGTIKSLTQTRKLHG 443
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/607 (35%), Positives = 356/607 (58%), Gaps = 6/607 (0%)
Query: 4 GFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC 63
G + N ++ ++ M G P +FTF LKAC + +G + H + VK G D
Sbjct: 47 GHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDM 106
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
V S++++Y CG + +A +F+ +P +N++SW A+I+GY G E+A+ +F+++
Sbjct: 107 VNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQ 166
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG--KGRNVFVATSLVDLYAKCGN 181
G D F+ L AC+ LG + IH ++ G N VA +L+DLY KCG
Sbjct: 167 EVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGK 226
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ ARRVF + EK ++SW+++I GYA G E++++F ++ +++ + + + ++
Sbjct: 227 LFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGV 286
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
A ++ G +F + + + +++DMY KCG + +A ++F EM ++ + W
Sbjct: 287 FADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISW 346
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
+++G +G K A +F +++ +P+ T++ +L GC+H+GLV++G+++F+ +
Sbjct: 347 TVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCS 406
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+ +EHY CMVDLLGR+G+L EA L+ SMP+E N +W LL+ CR+H +L +
Sbjct: 407 YHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGK 466
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
V L+ L+ N NYV++SNIY+ + W + +IR ++ K ++K G SWVE+D V
Sbjct: 467 EVGGILLRLDSENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEV 526
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAA-GFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
H F GD++HPL+EKI+ L E+ ++K G+V + L D+EEE K L HSEKL
Sbjct: 527 HFFYGGDDTHPLTEKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKL 586
Query: 541 ALAFGLITTA---PKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
A+ L+ + VIR+ KNLRVCGDCHE IK +SKI +VRD NRFH F +G
Sbjct: 587 AIGLALVCGGLEEGRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGL 646
Query: 598 CSCKDFW 604
CSC+D+W
Sbjct: 647 CSCRDYW 653
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 192/377 (50%), Gaps = 6/377 (1%)
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D + L+ +Y CG L A VFD + +NVVSWTA++ G+I GN E++ +F
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G+KP+ F+ L AC L L + IH + G V S++D+Y+KC
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + +A +F+ MP ++++SW++MI GY GF ++AL +F MQ + +T L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 240 SACASLGALELGVWASSFMERNEFL--SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
AC+ LGA++ G +F+ FL N + LID+Y KCG++ A +VF +++K
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+ W A++ G + G + + +F QL + IQ +G ++ LV +G+Q
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHA 301
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
+V S I ++D+ + G ++EA L MP N I W ++ G H
Sbjct: 302 FAIKVPSGVD-ISVCNSILDMYLKCGMINEAERLFSEMPAR-NVISWTVMITGYGKHGLG 359
Query: 418 DLAEHVLN--QLIALEP 432
A + + QL + EP
Sbjct: 360 KEAIRLFDEMQLDSTEP 376
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 172/328 (52%), Gaps = 4/328 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A+ + M+ G FTF LKAC+ + G + H+ ++ G
Sbjct: 145 MIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGG 204
Query: 61 L--DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+ V +L++LYV CG L A +VF I +K+V+SWTA+I GY EGNL E++ +
Sbjct: 205 FLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMEL 264
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
FR+L ++ D F + ++ + K +H + + G ++ V S++D+Y K
Sbjct: 265 FRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLK 324
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG + +A R+F +MP ++++SW+ MI GY +G KEA+ +F MQ ++ +P+ T + V
Sbjct: 325 CGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAV 384
Query: 239 LSACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
L C+ G +E G + S + + ++D+ + GR+ +A + M +
Sbjct: 385 LLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEA 444
Query: 298 QV-VWNAVVSGLSMNGYVKVAFGVFGQL 324
V +W ++S ++G +++ V G L
Sbjct: 445 NVGIWQTLLSACRVHGDLELGKEVGGIL 472
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 7/248 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ ++E + +R F ++ A Q G + H+ +K
Sbjct: 248 LILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVP 307
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V S+L++Y+ CG + +A ++F ++P +NV+SWT +I+GY G +EAI +F
Sbjct: 308 SGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFD 367
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +PD + + VL C+ G + + + + G V +VDL +
Sbjct: 368 EMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRA 427
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQRENLKPEYYTM 235
G +++A+ + D MP E ++ W +++ +G KE + + EN P Y M
Sbjct: 428 GRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSEN--PVNYVM 485
Query: 236 VGVLSACA 243
+ + A A
Sbjct: 486 MSNIYADA 493
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/543 (39%), Positives = 327/543 (60%), Gaps = 36/543 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++ + + + + +R +G P FT+PFVLKA D + G + IVK G
Sbjct: 214 MVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTG 273
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D D +V SL+++Y + +A K+FD++ ++ VSW +ISGY+ E+AIN FR
Sbjct: 274 MDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFR 333
Query: 121 RLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G KPD ++V L+ACT L +L IH YV + G + +L+D+YAKC
Sbjct: 334 EMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRIDNALLDMYAKC 392
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF------------------- 220
G + AR +FD+M K+++ W+SMI GY + G +EA D+F
Sbjct: 393 GCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYV 452
Query: 221 ------------YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
MQ + +KP+ +T+V +L+ CA LGALE G W +++ N + V
Sbjct: 453 QFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVV 512
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+GT LI+MY+KCG + ++ ++F E++DKD W +++ GL+MNG A +F ++E+ G
Sbjct: 513 VGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVG 572
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
+P+ TF+G+L C+H GLV+EGR+FFNSM +V + P +EHYGC++DLLGR+G LDEA
Sbjct: 573 AKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEA 632
Query: 389 HELIKSMPMEPNAIV---WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
ELI+ +P+E IV +GALL+ CR+H D+ E + +L +E +S + LL+NIY
Sbjct: 633 EELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIY 692
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
++ +W DA K+R M + G++K+ GCS +EVDG+VHEFLVGD SHP +I S L+ +
Sbjct: 693 ASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVT 752
Query: 506 TKL 508
+L
Sbjct: 753 GQL 755
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 204/412 (49%), Gaps = 43/412 (10%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHC-----GYLADALKVFDDIPDKNVVSWTAIISGYI 107
S I + GL+ D + ++ L C G L A K+F+ + D ++ + ++ Y
Sbjct: 163 QSQIFRIGLEGD---RDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYA 219
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
G L + + +F++L GL PD F+ VL A L D+ + + G++ + G + +
Sbjct: 220 KRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNY 279
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE- 226
V SL+D+Y + N+E A+++FD+M +D VSW+ MI GY ++A++ F MQ+E
Sbjct: 280 VYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEG 339
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
N KP+ T+V LSAC +L LELG +++ R E + L+DMYAKCG + A
Sbjct: 340 NEKPDEATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIA 398
Query: 287 CKVFREMKDKDQVVWNAVVSGL--------------------------SMNGYVKV---- 316
+F EM K+ + W +++SG +NGYV+
Sbjct: 399 RNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFD 458
Query: 317 -AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A +F +++ ++P+ T V LL GC G +++G+ + +T + +
Sbjct: 459 DAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDE-NRITMDVVVGTAL 517
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+++ + G +D++ E+ + + + W +++ G ++ KT A + +++
Sbjct: 518 IEMYSKCGCVDKSLEIFYELE-DKDTASWTSIICGLAMNGKTSEALRLFSEM 568
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/441 (47%), Positives = 291/441 (65%), Gaps = 2/441 (0%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+V T++V A G + AR +FD MP++D V+W++MI GY G +EAL +F M+
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 326
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
T+V L+ACA LGALE G W S + LGT LIDMY+KCG +A
Sbjct: 327 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 386
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A +VF M +++ W + VSGL+MNG + +F ++E G++PNG TFV +L GC+
Sbjct: 387 AAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCS 446
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
AGLVDEGR F+SM + P +EHYGCMVDL GR+G+LD+A I MP+EP+ VW
Sbjct: 447 MAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVW 506
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
GALL R+HK +L ++ +++L+A+E N +VLLSNIY+ S W + +R+MM K
Sbjct: 507 GALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAK 566
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
G++K+ GCS +EV G VHEF VG +HP ++I L E+ +L+ G++ T VLFDI
Sbjct: 567 GVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDI 626
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDV-IRIAKNLRVCGDCHEAIKLISKITGREII 583
EEE+K+ ++ HSEKLA+AFGL+ P+D+ IRI KNLRVC DCH+ K+ISK+ REI+
Sbjct: 627 EEEDKEDAISLHSEKLAIAFGLVAL-PEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIV 685
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
+RD NRFH F +G+CSCKD+W
Sbjct: 686 MRDRNRFHHFKDGACSCKDYW 706
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 135/251 (53%), Gaps = 4/251 (1%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T+++ G A ++FD +P ++ V+W A+I+GY++ G EA+ +F + H G
Sbjct: 272 TAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAA 331
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
++V LTAC QLG L KW+H + G +V + T+L+D+Y+KCG + A V
Sbjct: 332 VGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEV 391
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD M E+++ +W+S + G A NG ++ L +F M+ ++P T V VL C+ G +
Sbjct: 392 FDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLV 451
Query: 249 ELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVV 305
+ G M+ N + +P L ++D+Y + GR+ A M + + VW A++
Sbjct: 452 DEGRACFDSMKSNHGI-DPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 510
Query: 306 SGLSMNGYVKV 316
+ ++ V++
Sbjct: 511 NASRIHKNVEL 521
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 113/233 (48%), Gaps = 7/233 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V + A+ ++ MR+ G T L ACA+ + G HS G
Sbjct: 305 MIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRG 364
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + T+L+++Y CG +A A++VFD + ++NV +WT+ +SG G + + +F+
Sbjct: 365 MRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFK 424
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA--TSLVDLYAK 178
R+ G++P+ + V VL C+ G + + + ++ G + ++ +VDLY +
Sbjct: 425 RMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSM-KSNHGIDPWLEHYGCMVDLYGR 483
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQREN 227
G ++ A + MP E W +++ + + K A+D ++ +N
Sbjct: 484 AGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKN 536
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/543 (39%), Positives = 327/543 (60%), Gaps = 36/543 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++ + + + + +R +G P FT+PFVLKA D + G + IVK G
Sbjct: 168 MVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTG 227
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D D +V SL+++Y + +A K+FD++ ++ VSW +ISGY+ E+AIN FR
Sbjct: 228 MDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFR 287
Query: 121 RLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G KPD ++V L+ACT L +L IH YV + G + +L+D+YAKC
Sbjct: 288 EMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRIDNALLDMYAKC 346
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF------------------- 220
G + AR +FD+M K+++ W+SMI GY + G +EA D+F
Sbjct: 347 GCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYV 406
Query: 221 ------------YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
MQ + +KP+ +T+V +L+ CA LGALE G W +++ N + V
Sbjct: 407 QFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVV 466
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+GT LI+MY+KCG + ++ ++F E++DKD W +++ GL+MNG A +F ++E+ G
Sbjct: 467 VGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVG 526
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
+P+ TF+G+L C+H GLV+EGR+FFNSM +V + P +EHYGC++DLLGR+G LDEA
Sbjct: 527 AKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEA 586
Query: 389 HELIKSMPMEPNAIV---WGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
ELI+ +P+E IV +GALL+ CR+H D+ E + +L +E +S + LL+NIY
Sbjct: 587 EELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIY 646
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
++ +W DA K+R M + G++K+ GCS +EVDG+VHEFLVGD SHP +I S L+ +
Sbjct: 647 ASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMIEICSMLNRVT 706
Query: 506 TKL 508
+L
Sbjct: 707 GQL 709
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 204/412 (49%), Gaps = 43/412 (10%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHC-----GYLADALKVFDDIPDKNVVSWTAIISGYI 107
S I + GL+ D + ++ L C G L A K+F+ + D ++ + ++ Y
Sbjct: 117 QSQIFRIGLEGD---RDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYA 173
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
G L + + +F++L GL PD F+ VL A L D+ + + G++ + G + +
Sbjct: 174 KRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNY 233
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE- 226
V SL+D+Y + N+E A+++FD+M +D VSW+ MI GY ++A++ F MQ+E
Sbjct: 234 VYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEG 293
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
N KP+ T+V LSAC +L LELG +++ R E + L+DMYAKCG + A
Sbjct: 294 NEKPDEATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIA 352
Query: 287 CKVFREMKDKDQVVWNAVVSGL--------------------------SMNGYVKV---- 316
+F EM K+ + W +++SG +NGYV+
Sbjct: 353 RNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFD 412
Query: 317 -AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A +F +++ I+P+ T V LL GC G +++G+ + +T + +
Sbjct: 413 DAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDE-NRITMDVVVGTAL 471
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+++ + G +D++ E+ + + + W +++ G ++ KT A + +++
Sbjct: 472 IEMYSKCGCVDKSLEIFYELE-DKDTASWTSIICGLAMNGKTSEALRLFSEM 522
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 141/296 (47%), Gaps = 18/296 (6%)
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+ A ++F+ + + + ++ M++ YA G ++ L +F ++ + L P+ +T VL
Sbjct: 145 GNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 204
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A L + G F+ + + + +LIDMY + + A K+F EM +D V
Sbjct: 205 KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 264
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ-PNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WN ++SG + A F ++++ G + P+ T V L CT ++ G + N
Sbjct: 265 SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 324
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG---C-RLH 414
+ + T I++ ++D+ + G L+ A + M M+ N I W ++++G C L
Sbjct: 325 VRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISGYINCGDLR 381
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
+ DL + + + L W + + N Y H ++DA ++ + IQKI+
Sbjct: 382 EARDLFDKSPVRDVVL--WTA-----MINGYVQFHHFDDAV---ALFREMQIQKIK 427
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/604 (34%), Positives = 341/604 (56%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G A++ + +MR G T+FTF +L A LG + H+L++++
Sbjct: 207 MMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRST 266
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV SLL+ Y C L D ++FD++P+++ VS+ II+ Y + +FR
Sbjct: 267 SVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFR 326
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G +L+ L D+ K IH + G + +L+D+Y+KCG
Sbjct: 327 EMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCG 386
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+ F EK +SW+++I GY NG +EAL +F +M+R L+P+ T ++
Sbjct: 387 MLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIK 446
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A +SL + LG S++ R+ + S+ G+ L+DMYAKCG + +A + F EM +++ +
Sbjct: 447 ASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSIS 506
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNAV+S + G K A +F + CG P+ TF+ +L C+H GL DE ++F+ M
Sbjct: 507 WNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK 566
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+S++P EHY C++D LGR G + +++ MP + + I+W ++L CR+H +LA
Sbjct: 567 HQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELA 626
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
++L +EP ++ YV+LSNIY+ + +W DAA ++ +M D+G++K G SWVE+
Sbjct: 627 RVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQK 686
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
++ F D + P+ ++I +LD L ++ G+ P L ++ E K L HSE+L
Sbjct: 687 IYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERL 746
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF L+ T IRI KNL C DCH IK+ISKI R+IIVRD+ RFH F +G CSC
Sbjct: 747 AIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSC 806
Query: 601 KDFW 604
D+W
Sbjct: 807 GDYW 810
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 199/419 (47%), Gaps = 25/419 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLK--ACAREHDFQLGVRS-HSLIV 57
M+R + A+ + +M EG +P T VL C V S H +
Sbjct: 111 MMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT--------VPSLHPFAI 162
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
K GLD FV +LL+ Y G LA A +VF ++ DK+ V++ A++ G EG +A+
Sbjct: 163 KFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ 222
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+F + G+ F+ +LT + L +H V + NVFV SL+D Y+
Sbjct: 223 LFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYS 282
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KC ++ RR+FD+MPE+D VS++ +I YA N L +F MQ+ +
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
+LS SL + +G + + S +LG LIDMY+KCG + A F +K
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKS 402
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+ W A+++G NG + A +F + + G++P+ TF ++ + ++ GRQ +
Sbjct: 403 AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHS 462
Query: 358 SMSR------VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ R VFS + +VD+ + G LDEA MP E N+I W A+++
Sbjct: 463 YLIRSGYKSSVFSGS-------VLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 163/342 (47%), Gaps = 11/342 (3%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
+L+ Y G L A +F P +N +WT ++ + G +A+++FR +L G+ PD
Sbjct: 80 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139
Query: 131 SFSIVRVLT--ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
++ VL C T +H + + G +VFV +L+D Y K G + ARRV
Sbjct: 140 RVTVTTVLNLPGC-------TVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F +M +KD V++++M+ G + G +AL +F M+R + ++T +L+ A + L
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHL 252
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
LG + + R+ + N + +L+D Y+KC + ++F EM ++D V +N +++
Sbjct: 253 LLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY 312
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+ N +F +++K G + +L V G+Q + + L
Sbjct: 313 AWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV-LLGLASE 371
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++D+ + G LD A + E +AI W AL+ G
Sbjct: 372 DLLGNALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALITG 412
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 8/238 (3%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
+N+F ++ Y+ G++ A+ +F P ++ +W+ M++ +A+ G +AL +F M
Sbjct: 72 KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGR 282
E + P+ T+ VL+ L +A F ++ + F+ N TL+D Y K G
Sbjct: 132 LGEGVIPDRVTVTTVLN-LPGCTVPSLHPFAIKFGLDTHVFVCN-----TLLDAYCKHGL 185
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+A A +VF EM DKD V +NA++ G S G A +F + + GI TF +L
Sbjct: 186 LAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTV 245
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
+ G Q + R S+ + + ++D + LD+ L MP N
Sbjct: 246 AAGMAHLLLGHQVHALVLRSTSVLNVFVN-NSLLDFYSKCDCLDDMRRLFDEMPERDN 302
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/604 (34%), Positives = 341/604 (56%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G A++ + +MR G T+FTF +L A LG + H+L++++
Sbjct: 207 MMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRST 266
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV SLL+ Y C L D ++FD++P+++ VS+ II+ Y + +FR
Sbjct: 267 SVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFR 326
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G +L+ L D+ K IH + G + +L+D+Y+KCG
Sbjct: 327 EMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCG 386
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A+ F EK +SW+++I GY NG +EAL +F +M+R L+P+ T ++
Sbjct: 387 MLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIK 446
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A +SL + LG S++ R+ + S+ G+ L+DMYAKCG + +A + F EM +++ +
Sbjct: 447 ASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSIS 506
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNAV+S + G K A +F + CG P+ TF+ +L C+H GL DE ++F+ M
Sbjct: 507 WNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK 566
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+S++P EHY C++D LGR G + +++ MP + + I+W ++L CR+H +LA
Sbjct: 567 HQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELA 626
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
++L +EP ++ YV+LSNIY+ + +W DAA ++ +M D+G++K G SWVE+
Sbjct: 627 RVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQK 686
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
++ F D + P+ ++I +LD L ++ G+ P L ++ E K L HSE+L
Sbjct: 687 IYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERL 746
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AF L+ T IRI KNL C DCH IK+ISKI R+IIVRD+ RFH F +G CSC
Sbjct: 747 AIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSC 806
Query: 601 KDFW 604
D+W
Sbjct: 807 GDYW 810
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 197/418 (47%), Gaps = 23/418 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLK--ACAREHDFQLGVRSHSLIVK 58
M+R + A+ + +M EG +P T VL C H +K
Sbjct: 111 MMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP-------SLHPFAIK 163
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
GLD FV +LL+ Y G LA A +VF ++ DK+ V++ A++ G EG +A+ +
Sbjct: 164 FGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQL 223
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F + G+ F+ +LT + L +H V + NVFV SL+D Y+K
Sbjct: 224 FAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSK 283
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
C ++ RR+FD+MPE+D VS++ +I YA N L +F MQ+ + +
Sbjct: 284 CDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATM 343
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
LS SL + +G + + S +LG LIDMY+KCG + A F +K
Sbjct: 344 LSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSA 403
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ W A+++G NG + A +F + + G++P+ TF ++ + ++ GRQ +
Sbjct: 404 ISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSY 463
Query: 359 MSR------VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ R VFS + +VD+ + G LDEA MP E N+I W A+++
Sbjct: 464 LIRSGYKSSVFSGS-------VLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 163/342 (47%), Gaps = 11/342 (3%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
+L+ Y G L A +F P +N +WT ++ + G +A+++FR +L G+ PD
Sbjct: 80 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139
Query: 131 SFSIVRVLT--ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
++ VL C T +H + + G +VFV +L+D Y K G + ARRV
Sbjct: 140 RVTVTTVLNLPGC-------TVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F +M +KD V++++M+ G + G +AL +F M+R + ++T +L+ A + L
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHL 252
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
LG + + R+ + N + +L+D Y+KC + ++F EM ++D V +N +++
Sbjct: 253 LLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY 312
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+ N +F +++K G + +L V G+Q + + L
Sbjct: 313 AWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV-LLGLASE 371
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++D+ + G LD A + E +AI W AL+ G
Sbjct: 372 DLLGNALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALITG 412
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 8/238 (3%)
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
+N+F ++ Y+ G++ A+ +F P ++ +W+ M++ +A+ G +AL +F M
Sbjct: 72 KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131
Query: 224 QRENLKPEYYTMVGVLSACASLGALELGVWASSF-MERNEFLSNPVLGTTLIDMYAKCGR 282
E + P+ T+ VL+ L +A F ++ + F+ N TL+D Y K G
Sbjct: 132 LGEGVIPDRVTVTTVLN-LPGCTVPSLHPFAIKFGLDTHVFVCN-----TLLDAYCKHGL 185
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+A A +VF EM DKD V +NA++ G S G A +F + + GI TF +L
Sbjct: 186 LAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTV 245
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
+ G Q + R S+ + + ++D + LD+ L MP N
Sbjct: 246 AAGMAHLLLGHQVHALVLRSTSVLNVFVN-NSLLDFYSKCDCLDDMRRLFDEMPERDN 302
>gi|115473893|ref|NP_001060545.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|24414187|dbj|BAC22429.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113612081|dbj|BAF22459.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|125559498|gb|EAZ05034.1| hypothetical protein OsI_27217 [Oryza sativa Indica Group]
gi|125601406|gb|EAZ40982.1| hypothetical protein OsJ_25464 [Oryza sativa Japonica Group]
Length = 544
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/555 (41%), Positives = 331/555 (59%), Gaps = 45/555 (8%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+L+VK GL V +L+ Y G + DA +VFD + ++ VS+ ++I + G++
Sbjct: 32 HALLVKLGLQPYARVHNALIQAYAASGLVDDARRVFDGMSHRDTVSFNSMIHAHAMSGDV 91
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
A RRL R P + W TS+
Sbjct: 92 VSA----RRLFERVPSP------------------TPVTW-----------------TSM 112
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
V + G++ ARR+F++MP +D+VSW++M+ G A N P EAL +F M E P
Sbjct: 113 VAGLCRAGDVAAARRLFEEMPVRDLVSWNAMMSGLAGNRRPVEALCLFRRMMAEGFAPNR 172
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLS--NPVLGTTLIDMYAKCGRMAQACKVF 290
T++ L+ACA GALE G W +F+ER + LGT L+DMYAKCG + A VF
Sbjct: 173 GTVLSALAACAGAGALETGKWIHAFVERKRLFRWWDEFLGTALLDMYAKCGAVELALDVF 232
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLV 349
+++ ++ WNA+++GL+MNGY A +F ++E + P+ TFVG+L C+H G V
Sbjct: 233 TKLRSRNTCTWNAMINGLAMNGYSAKALDMFRKMELDRTVVPDEVTFVGVLLACSHGGFV 292
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
D GR+ F+ + + + + ++EHY CMVDLL RSG L EAH++I MPM+P+A+VW ALL
Sbjct: 293 DVGREHFHMIEKKYGIRLILEHYACMVDLLARSGHLQEAHKIIAGMPMKPDAVVWRALLG 352
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKI 469
GCRLHK +AE ++++ E SG++VLLSN+Y+A +W+ +R M KGI+KI
Sbjct: 353 GCRLHKDVKMAETAISEM---EATCSGDHVLLSNLYAAVGRWSGVEDVRRTMRSKGIEKI 409
Query: 470 RGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEK 529
GCS +E++ +HEF+ GD SHP I++KL E++ +++ G+V T V +D+EEEEK
Sbjct: 410 PGCSSIEINDSIHEFVSGDKSHPSYNDIHAKLAEISARMQQQGYVTETAEVFYDVEEEEK 469
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+ L HSEKLA+AFGLI P IRI KNLR C DCH+ KL+S+I EI+VRD R
Sbjct: 470 EQALGHHSEKLAIAFGLIGGPPNVAIRIVKNLRFCADCHKFAKLVSQIYHWEIVVRDRAR 529
Query: 590 FHCFIEGSCSCKDFW 604
FH F EG+CSC DFW
Sbjct: 530 FHHFTEGACSCNDFW 544
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G N A+ + M EGF P T L ACA + G H+ + +
Sbjct: 143 MMSGLAGNRRPVEALCLFRRMMAEGFAPNRGTVLSALAACAGAGALETGKWIHAFVERKR 202
Query: 61 LD--CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
L DEF+ T+LL++Y CG + AL VF + +N +W A+I+G G +A++M
Sbjct: 203 LFRWWDEFLGTALLDMYAKCGAVELALDVFTKLRSRNTCTWNAMINGLAMNGYSAKALDM 262
Query: 119 FRRL-LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA--TSLVDL 175
FR++ L R + PD + V VL AC+ G + + H ++ E G + + +VDL
Sbjct: 263 FRKMELDRTVVPDEVTFVGVLLACSHGGFVDVGR-EHFHMIEKKYGIRLILEHYACMVDL 321
Query: 176 YAKCGNMEKARRVFDQMPEK-DIVSWSSMIQG 206
A+ G++++A ++ MP K D V W +++ G
Sbjct: 322 LARSGHLQEAHKIIAGMPMKPDAVVWRALLGG 353
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 41/259 (15%)
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+H + + G V +L+ YA G ++ ARRVFD M +D VS++SMI +A +G
Sbjct: 31 LHALLVKLGLQPYARVHNALIQAYAASGLVDDARRVFDGMSHRDTVSFNSMIHAHAMSGD 90
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
A +F + PV T+
Sbjct: 91 VVSARRLFERVPS---------------------------------------PTPVTWTS 111
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
++ + G +A A ++F EM +D V WNA++SGL+ N A +F ++ G PN
Sbjct: 112 MVAGLCRAGDVAAARRLFEEMPVRDLVSWNAMMSGLAGNRRPVEALCLFRRMMAEGFAPN 171
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-CMVDLLGRSGQLDEAHEL 391
T + L C AG ++ G+ + R E G ++D+ + G ++ A ++
Sbjct: 172 RGTVLSALAACAGAGALETGKWIHAFVERKRLFRWWDEFLGTALLDMYAKCGAVELALDV 231
Query: 392 IKSMPMEPNAIVWGALLAG 410
+ N W A++ G
Sbjct: 232 FTKL-RSRNTCTWNAMING 249
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/423 (49%), Positives = 291/423 (68%), Gaps = 1/423 (0%)
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
E A +VF+ MPEKDIV+W+S+I G+A NG P EAL ++ M E ++P+ +TMV +LSAC
Sbjct: 58 ESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSAC 117
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVW 301
A L L LG A +M + N L+D+YAKCG +++A K+F EM +++ V W
Sbjct: 118 AELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSW 177
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
+++ GL++NG+ K A F +E+ G+ P+ TFVG+L C+H G+V+EG ++F M
Sbjct: 178 TSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKE 237
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+ + P IEHYGCMVDLLGR+G L EA++ I+ MP++PNA++W LL C +H L
Sbjct: 238 QYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGA 297
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
+L+ LEP +SG+YVLLSN+Y++ +W+D ++R M +G++K G S VE+ V
Sbjct: 298 FARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNHV 357
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
HEF++GD +HP SE IY L E+A KLK AG+VP T +VL DIEEEEK+ L HSEK+A
Sbjct: 358 HEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSEKIA 417
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+AF LI T P IRI KNLRVC DCH AIKLISK+ R+I+VRD +RFH F +GSCSC+
Sbjct: 418 IAFMLINTLPGTPIRIIKNLRVCADCHFAIKLISKVFERDIVVRDCSRFHHFRDGSCSCR 477
Query: 602 DFW 604
D+W
Sbjct: 478 DYW 480
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 151/256 (58%), Gaps = 5/256 (1%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
Y A KVF+ +P+K++V+W ++I+G+ G EA+ +++R+ G++PD F++V +L
Sbjct: 55 AYFESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLL 114
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP-EKDI 197
+AC +L L + H Y+ + G +N+ +L+DLYAKCG + +AR++FD+M E+++
Sbjct: 115 SACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNV 174
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV-WASS 256
VSW+S+I G A NGF KEAL+ F +M+RE L P T VGVL AC+ G + G +
Sbjct: 175 VSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKR 234
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVK 315
E+ + + ++D+ + G + +A ++M + V+W ++ +++G+
Sbjct: 235 MKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGH-- 292
Query: 316 VAFGVFGQLEKCGIQP 331
+ G F + ++P
Sbjct: 293 LGLGAFARARLLQLEP 308
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 118/257 (45%), Gaps = 34/257 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF N A+ Y M +EG P FT +L ACA LG R+H +VK G
Sbjct: 78 VINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVG 137
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
L+ + +LL+LY CG +++A K+FD++ ++NVVSWT++I G G +EA+ F
Sbjct: 138 LNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHF 197
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ + GL P + V VL AC+ G VNE G F
Sbjct: 198 KDMEREGLVPSEITFVGVLYACSHC----------GIVNE---GFEYF------------ 232
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ + +D +P I + M+ G KEA D +M L+P +L
Sbjct: 233 ---KRMKEQYDIVPR--IEHYGCMVDLLGRAGLLKEAYDYIQDMP---LQPNAVIWRTLL 284
Query: 240 SACASLGALELGVWASS 256
AC G L LG +A +
Sbjct: 285 GACTIHGHLGLGAFARA 301
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/545 (39%), Positives = 333/545 (61%), Gaps = 10/545 (1%)
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
D D +TS+++ G + +A ++FD++ +++V++WT +++GY +++A +F
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ + S +L Q G + A+ + E + V +++ + G
Sbjct: 229 MPEK----TEVSWTSMLMGYVQNGRIEDAEELF----EVMPVKPVIACNAMISGLGQKGE 280
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ KARRVFD M E++ SW ++I+ + NGF EALD+F MQ++ ++P + T++ +LS
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
CASL +L G + + R +F + + + L+ MY KCG + ++ +F KD ++W
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
N+++SG + +G + A VF ++ G +PN TFV L C++AG+V+EG + + SM
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
VF + P+ HY CMVD+LGR+G+ +EA E+I SM +EP+A VWG+LL CR H + D+A
Sbjct: 461 SVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA 520
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +LI +EP NSG Y+LLSN+Y++ +W D A++R +M + ++K GCSW EV+
Sbjct: 521 EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENK 580
Query: 481 VHEFLVGD-NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F G NSHP E I LDEL L+ AG+ P + L D++EEEK L HSE+
Sbjct: 581 VHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSER 640
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+ L+ + IR+ KNLRVC DCH AIK+ISK+ REII+RD NRFH F G CS
Sbjct: 641 LAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECS 700
Query: 600 CKDFW 604
CKD+W
Sbjct: 701 CKDYW 705
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 173/351 (49%), Gaps = 32/351 (9%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++ Y+ G + +A KVFD +P++NVVSWTA++ GY++ G ++ A ++F ++ + +
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----N 140
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S +L Q G + A ++ + + ++ TS++ K G +++AR +FD
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPD----KDNIARTSMIHGLCKEGRVDEAREIFD 196
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M E+ +++W++M+ GY N +A +F ++ PE + S ++ +
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEV--------SWTSMLM 242
Query: 251 GVWASSFMERNEFL-----SNPVLG-TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
G + +E E L PV+ +I + G +A+A +VF MK+++ W V
Sbjct: 243 GYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTV 302
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-F 363
+ NG+ A +F ++K G++P T + +L C + G+Q + R F
Sbjct: 303 IKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF 362
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + ++ + + G+L ++ + P + + I+W ++++G H
Sbjct: 363 DVDVYVA--SVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASH 410
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 155/356 (43%), Gaps = 66/356 (18%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G + +A K+FD K++ SW ++++GY +A +F + PD
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PD-------- 76
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
RN+ LV Y K G +++AR+VFD MPE+++V
Sbjct: 77 -------------------------RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
SW+++++GY NG A +F+ M +N ++G L A +L
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL-------- 163
Query: 259 ERNEFLSNP--VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
E + + + T++I K GR+ +A ++F EM ++ + W +V+G N V
Sbjct: 164 --YEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDD 221
Query: 317 AFGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A +F + EK + ++ +L G G +++ + F V + P+I M
Sbjct: 222 ARKIFDVMPEKTEV-----SWTSMLMGYVQNGRIEDAEELFE----VMPVKPVIA-CNAM 271
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
+ LG+ G++ +A + SM E N W ++ ++H++ L+ I ++
Sbjct: 272 ISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI---KIHERNGFELEALDLFILMQ 323
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A++ + M+ +G PT T +L CA G + H+ +V+ D D +V + L+
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLM 373
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL-LHRGLKPDS 131
+Y+ CG L + +FD P K+++ W +IISGY + G EEA+ +F + L KP+
Sbjct: 374 TMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNE 433
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA--TSLVDLYAKCGNMEKARRVF 189
+ V L+AC+ G + I+ + E+ G A +VD+ + G +A +
Sbjct: 434 VTFVATLSACSYAGMVEEGLKIYESM-ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI 492
Query: 190 DQMP-EKDIVSWSSMI 204
D M E D W S++
Sbjct: 493 DSMTVEPDAAVWGSLL 508
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 124/260 (47%), Gaps = 27/260 (10%)
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
++ G + +AR++FD K I SW+SM+ GY +N P++A +F M N+ +
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI----ISWN 83
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
G++S G ++ M N V T L+ Y G++ A +F +M +K
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF--VGLLCGCTHAGLVDEGRQ 354
++V W ++ G +G + A ++ + P+ + ++ G G VDE R+
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKLYEMI------PDKDNIARTSMIHGLCKEGRVDEARE 193
Query: 355 FFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
F+ MS V + T M+ Y G++ ++D+A ++ MP E + W ++L G
Sbjct: 194 IFDEMSERSVITWTTMVTGY-------GQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYV 245
Query: 413 LHKKTDLAEHVLNQLIALEP 432
+ + + AE + +++ ++P
Sbjct: 246 QNGRIEDAEELF-EVMPVKP 264
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
P I ++ G++ +A K+F K WN++V+G N + A +F ++
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM-- 74
Query: 327 CGIQPNGN--TFVGLLCGCTHAGLVDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRS 382
P+ N ++ GL+ G G +DE R+ F+ M V S T +++ Y +
Sbjct: 75 ----PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGY-------VHN 123
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAG 410
G++D A L MP E N + W +L G
Sbjct: 124 GKVDVAESLFWKMP-EKNKVSWTVMLIG 150
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/615 (37%), Positives = 351/615 (57%), Gaps = 16/615 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ N AI M EGF T+ VL+ACA G H+ ++ G
Sbjct: 332 MVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCG 391
Query: 61 LDCDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L E V S++ +Y CG A+ VF+ +P K+ VSW A+I+ + ++A+ +F
Sbjct: 392 LLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELF 451
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN-VFVATSLVDLYAK 178
+ GL+ + F+++ +L AC L DL A+ IH G G N V S+V++YA+
Sbjct: 452 HGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYAR 511
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYAS--NGFPKEALDMFYNMQRENLKPEYYTMV 236
CG++ A++ FD + EK +V+WS ++ YA +G + A F M+ E +KP T V
Sbjct: 512 CGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFV 571
Query: 237 GVLSACASLGALELG------VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
L ACA++ LE G AS F+E ++ VLG T+I+MY KCG + A VF
Sbjct: 572 SALDACAAMATLEHGRSMHRRAAASGFVE-----TSLVLGNTIINMYGKCGSPSDAKLVF 626
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+M +K + WN+++ + NG+ A ++ G P+ T V +L G +HAGL++
Sbjct: 627 DQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLE 686
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM-EPNAIVWGALLA 409
G + F S + L P C+VDLL R G LD A ELI + P + + I W LLA
Sbjct: 687 RGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLA 746
Query: 410 GCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKI 469
C+ + ++ LEP +SG++V+L+N+Y++ +W+DA++IR MM ++K
Sbjct: 747 ACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKE 806
Query: 470 RGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEK 529
GCSW+E+ G VHEF+ G++ HP +I L++L +++ AG+VP T +V+ D+EE +K
Sbjct: 807 PGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDK 866
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+ L+ HSE+LA+ FGL++T P + IR+ KNLRVC DCH A K+IS + GREI+VRD++R
Sbjct: 867 EEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSR 926
Query: 590 FHCFIEGSCSCKDFW 604
FH F G CSC DFW
Sbjct: 927 FHHFKHGQCSCGDFW 941
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 220/442 (49%), Gaps = 2/442 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + N ++ A+E + M+ EG P F L ACA + G + HS +V +G
Sbjct: 29 MMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSG 88
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + + SL+N+Y C + A KVFD + ++VVSWTA+++ Y G +A+
Sbjct: 89 LTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLS 148
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+KP+ + V ++ C +L L + IH + G + + +LV +Y CG
Sbjct: 149 RMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCG 208
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + + VF +M + ++ W++MI G + NG +E L +F M E +K T + ++
Sbjct: 209 SFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVE 268
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C +L A++ G + + + F S+ +L T+LI +Y +CG + +A + M +D V
Sbjct: 269 VCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVA 328
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+V+ + NG A + +++ G N T++ +L C + + +GR+ +
Sbjct: 329 WNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVL 388
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
L + ++ + G+ GQ + A + ++MP + + + W A++ + K A
Sbjct: 389 LCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDD-VSWNAVINASVGNSKFQDA 447
Query: 421 EHVLNQLIALEPWNSGNYVLLS 442
+ + + LE S + LLS
Sbjct: 448 LELFHGM-ELEGLRSNEFTLLS 468
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 178/355 (50%), Gaps = 4/355 (1%)
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y C + DAL VFD I KNV SWT +++ Y G+ EA+ +F R+ G +PD
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
V L AC G+L + IH V +G N+ ++ SLV++Y KC ++ A +VFD M
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
+D+VSW++M+ YA NG +AL+ M E +KP T V ++ CA L L+LG
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ + +LG L+ MY CG VF M ++W +++G S NG
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF-FNSMSRVFSLTPMIEHY 372
+ VF +++ G++ N T++ ++ C + V EG + F + ++
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT- 299
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
++ L G+ G LD A L++ M + + + W A++ C + A H+L ++
Sbjct: 300 -SLISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVTACAQNGDNWEAIHLLRRM 352
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/625 (36%), Positives = 349/625 (55%), Gaps = 43/625 (6%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ A++ M +G P + T+ L ACAR + G + H +++ D +V +++
Sbjct: 273 REALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAM 332
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+ LY CG +A +VF + D+N VSWT +I G++ G E++ +F ++ + D
Sbjct: 333 VELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQ 392
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
F++ +++ C D+ +H ++G R V V+ SL+ +YAKCGN++ A +F+
Sbjct: 393 FALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNF 452
Query: 192 MPEKDIVSWSSMIQGYAS-------------------------------NGFPKEALDMF 220
M E+DIVSW+ MI Y+ +G ++ L M+
Sbjct: 453 MAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMY 512
Query: 221 YNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK 279
+M E ++ P++ T V + CA +GA +LG + + + + +I MY+K
Sbjct: 513 SDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSK 572
Query: 280 CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
CGR+++A K F + KD V WNA+++G S +G K A +F + G +P+ ++V +
Sbjct: 573 CGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAV 632
Query: 340 LCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP 399
L GC+H+GLV+EG+ +F+ M R +++P +EH+ CMVDLLGR+G L EA LI MPM+P
Sbjct: 633 LSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKP 692
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRS 459
A VWGALL+ C+ H DLAE L L+ SG Y+LL+ +Y+ + K +D+A++R
Sbjct: 693 TAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRK 752
Query: 460 MMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDH 519
+M DKGI+K G SW+EV+ VH F D SHP I KLDEL K+ G+V T
Sbjct: 753 LMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVRT--- 809
Query: 520 VLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITG 579
E + HSEKLA+AFG+++ I I KNLR+C DCH IKLIS +T
Sbjct: 810 -----ESPRSEIH---HSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTD 861
Query: 580 REIIVRDNNRFHCFIEGSCSCKDFW 604
RE ++RD RFH F GSCSC D+W
Sbjct: 862 REFVIRDGVRFHHFKGGSCSCMDYW 886
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 221/492 (44%), Gaps = 66/492 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ + F +A++ + SMR G LP FTF V+K+C ++ ++ L+ K
Sbjct: 129 IMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKF 188
Query: 60 GLDCDEFVKTSLLNLYVHCGYLA-------------------------------DALKVF 88
D V+T+L+++ V CG + AL++F
Sbjct: 189 DSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIF 248
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+P+++VVSW +IS G + EA++M + +G++PDS + LTAC +L L
Sbjct: 249 KSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLE 308
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K +H V + +VA+++V+LYAKCG ++A+RVF + +++ VSW+ +I G+
Sbjct: 309 WGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFL 368
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
G E++++F M+ E + + + + ++S C + + LG S ++ V
Sbjct: 369 QYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVV 428
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL---- 324
+ +LI MYAKCG + A +F M ++D V W +++ S G + A F +
Sbjct: 429 VSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRN 488
Query: 325 ----------------EKCGIQ------------PNGNTFVGLLCGCTHAGLVDEGRQFF 356
E+ G++ P+ T+V L GC G G Q
Sbjct: 489 VITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQII 548
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+V L ++ + + G++ EA + + + + W A++ G H
Sbjct: 549 GHTVKV-GLILDTSVVNAVITMYSKCGRISEARKAFDFLS-RKDLVSWNAMITGYSQHGM 606
Query: 417 TDLAEHVLNQLI 428
A + + ++
Sbjct: 607 GKQAIEIFDDIL 618
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 175/372 (47%), Gaps = 34/372 (9%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK-P 129
++N Y G L+DA+++F +P ++V SW I+SGY G A+++F + G P
Sbjct: 98 MMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLP 157
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR-- 187
++F+ V+ +C LG A + G +++ + V T+LVD+ +CG M+ A +
Sbjct: 158 NAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQF 217
Query: 188 -----------------------------VFDQMPEKDIVSWSSMIQGYASNGFPKEALD 218
+F MPE+D+VSW+ +I + +G +EALD
Sbjct: 218 SRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALD 277
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
M +M + ++P+ T L+ACA L +LE G + RN +P + + ++++YA
Sbjct: 278 MVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYA 337
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
KCG +A +VF ++D++ V W ++ G G + +F Q+ + +
Sbjct: 338 KCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALAT 397
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
L+ GC + + G Q +S+ T + ++ + + G L A ELI + E
Sbjct: 398 LISGCCNTMDICLGSQ-LHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNA-ELIFNFMAE 455
Query: 399 PNAIVWGALLAG 410
+ + W ++
Sbjct: 456 RDIVSWTGMITA 467
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 150/333 (45%), Gaps = 41/333 (12%)
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
L A + RL++ GL F +L A G LS A+ + + NV
Sbjct: 41 LTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDAR---NLLRDEITEPNVITHNI 97
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLKP 230
+++ YAK G++ A +F +MP +D+ SW++++ GY +G ALD+F +M Q + P
Sbjct: 98 MMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLP 157
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK-- 288
+T V+ +C +LG E+ + + + + +P + T L+DM +CG M A K
Sbjct: 158 NAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQF 217
Query: 289 -----------------------------VFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
+F+ M ++D V WN V+S LS +G V+ A
Sbjct: 218 SRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALD 277
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY--GCMVD 377
+ + G++P+ T+ L C ++ G+Q + R P I+ Y MV+
Sbjct: 278 MVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNL---PHIDPYVASAMVE 334
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
L + G EA + S+ + N++ W L+ G
Sbjct: 335 LYAKCGCFKEAKRVFSSLR-DRNSVSWTVLIGG 366
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 47/303 (15%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+ ++ + + ++ Y+ M E +P T+ + + CA +LG + VK
Sbjct: 495 MLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKV 554
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL D V +++ +Y CG +++A K FD + K++VSW A+I+GY G ++AI +F
Sbjct: 555 GLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIF 614
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA----TSLVDL 175
+L++G KPD S V VL+ C+ G + K+ Y + + N+ + +VDL
Sbjct: 615 DDILNKGAKPDYISYVAVLSGCSHSGLVEEGKF---YFDMMKRDHNISPGLEHFSCMVDL 671
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
+ G++ +A+ + D+MP +KP
Sbjct: 672 LGRAGHLIEAKNLIDEMP----------------------------------MKPTAEVW 697
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREM 293
+LSAC + G +L A+ + L +P G L MYA G+ + +V + M
Sbjct: 698 GALLSACKTHGNNDLAELAAKHLFD---LDSPGSGGYMLLAKMYADAGKSDDSAQVRKLM 754
Query: 294 KDK 296
+DK
Sbjct: 755 RDK 757
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
N + +++ YAK G ++ A ++F M +D WN ++SG +G A +F +
Sbjct: 91 NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMR 150
Query: 326 KCGIQ-PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL-TPMIEHYGCMVDLLGRSG 383
+ G PN TF ++ C G + Q +S+ S P ++ +VD+L R G
Sbjct: 151 QTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQ--TALVDMLVRCG 208
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
+D A + + P I ++L G + K+ +H L ++ + ++ ++ +
Sbjct: 209 AMDFASKQFSRIK-NPTIICRNSMLVG---YAKSHGVDHALEIFKSMPERDVVSWNMVIS 264
Query: 444 IYSASHKWNDAAKIRSMMGDKGIQ 467
S S + +A + M KG++
Sbjct: 265 ALSKSGRVREALDMVVDMHGKGVR 288
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/603 (37%), Positives = 351/603 (58%), Gaps = 31/603 (5%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
F +L+AC LG + HSLI +G D+F+ LLNLY G L A+ +FD +P
Sbjct: 72 FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK------------------------ 128
+N++S +I Y+ GNLE A N+F + R +
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191
Query: 129 -------PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
PD +S+ VL C LG L + +H YV + G N+ V SL +Y K G+
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGS 251
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
M RV + MP+ +V+W++++ G A G+ + LD + M+ +P+ T V V+S+
Sbjct: 252 MHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISS 311
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C+ L L G + + S + ++L+ MY++CG + + K F E K++D V+W
Sbjct: 312 CSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLW 371
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
+++++ +G + A +F ++E+ + N TF+ LL C+H GL D+G F+ M +
Sbjct: 372 SSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVK 431
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+ L ++HY C+VDLLGRSG L+EA +I+SMP++ +AI+W LL+ C++HK ++A
Sbjct: 432 KYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIAR 491
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
V ++++ ++P +S +YVLL+NIYS++++W + +++R M DK ++K G SWVEV V
Sbjct: 492 RVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQV 551
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
H+F +GD HP +I L+EL +++K G+VP T VL D++ EEK+ L HSEKLA
Sbjct: 552 HQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLA 611
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+AF L+ T IR+ KNLRVC DCH AIK IS+I EIIVRD++RFH F G+CSC
Sbjct: 612 IAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCG 671
Query: 602 DFW 604
D+W
Sbjct: 672 DYW 674
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 168/319 (52%), Gaps = 2/319 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G + + A+ ++ M F+P ++ VL+ CA G + H+ ++K G
Sbjct: 172 MVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCG 231
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+C+ V SL ++Y+ G + D +V + +PD ++V+W ++SG +G E ++ +
Sbjct: 232 FECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYC 291
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G +PD + V V+++C++L L K IH +AG V V +SLV +Y++CG
Sbjct: 292 MMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCG 351
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ + + F + E+D+V WSSMI Y +G +EA+ +F M++ENL T + +L
Sbjct: 352 CLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLY 411
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMKDK-DQ 298
AC+ G + G+ M + L + T L+D+ + G + +A + R M K D
Sbjct: 412 ACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADA 471
Query: 299 VVWNAVVSGLSMNGYVKVA 317
++W ++S ++ ++A
Sbjct: 472 IIWKTLLSACKIHKNAEIA 490
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 171/375 (45%), Gaps = 42/375 (11%)
Query: 108 NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
++G++ EA F L +P FS +L AC L +S K +H + +G + F
Sbjct: 50 SKGHIREAFESF--LSEIWAEPRLFS--NLLQACIPLKSVSLGKQLHSLIFTSGCSSDKF 105
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVS---------------------------- 199
++ L++LY+K G ++ A +FD+MP ++I+S
Sbjct: 106 ISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRN 165
Query: 200 ---WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASS 256
W++M+ G +EAL +F M + P+ Y++ VL CA LGAL G +
Sbjct: 166 VATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHA 225
Query: 257 FMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
++ + F N V+G +L MY K G M +V M D V WN ++SG + GY +
Sbjct: 226 YVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEG 285
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
+ ++ G +P+ TFV ++ C+ ++ +G+Q + + + + +V
Sbjct: 286 VLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSS-LV 344
Query: 377 DLLGRSGQLDEAHELIKSMP--MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWN 434
+ R G L ++ IK+ E + ++W +++A H + + A + N++ E
Sbjct: 345 SMYSRCGCLQDS---IKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEM-EQENLP 400
Query: 435 SGNYVLLSNIYSASH 449
LS +Y+ SH
Sbjct: 401 GNEITFLSLLYACSH 415
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/604 (36%), Positives = 346/604 (57%), Gaps = 35/604 (5%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
+ L+ACAR +G + H I+K G+D + + +L+N+Y CG + DAL +F+ +P +
Sbjct: 8 YQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHR 67
Query: 95 NVVSWTAIISGYINEGNLEE-AINMFRRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKW 152
+ +SW +I++ N+ NL ++MF + + GL+PD + ++ AC LG + K
Sbjct: 68 DPISWASILTAN-NQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQ 126
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+H + + V +SLVD+YAKCG + R VFD + K+ +SW++MI GYA +G
Sbjct: 127 VHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGR 186
Query: 213 PKEALDMFYNMQRENLKP--------------------------------EYYTMVGVLS 240
+A+ +F M +NL + + + ++
Sbjct: 187 KLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIG 246
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A+L L LG + + S+ + L+DMYAKC + A K+F M +D V
Sbjct: 247 ASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVS 306
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++ G + +G + A ++ ++ G++PN TFVGL+ C+H GLV +GR FFNSM
Sbjct: 307 WTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMI 366
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + + P ++HY C++DLL RSG L+EA LIK+MP +P+ W ALL+ C H+ T +
Sbjct: 367 KDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIG 426
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
V + L++L+P + Y+LLSNIY+++ W +K+R +M ++K G S + +
Sbjct: 427 IRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKE 486
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
FL G+ SHP E+I+ L+EL ++K G++P T VL D+E++EK+ L HSE+L
Sbjct: 487 SQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERL 546
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+GL+ P V+ I KNLRVCGDCH +K IS I REI+VRD NR+H F +G CSC
Sbjct: 547 AVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSC 606
Query: 601 KDFW 604
+FW
Sbjct: 607 NNFW 610
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 198/414 (47%), Gaps = 51/414 (12%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
F + +G P ++ F ++KACA + G + H+ + + + D+ VK+SL+++Y
Sbjct: 92 FPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYA 151
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP------- 129
CG VFD I KN +SWTA+ISGY G +AI +F+++ + L
Sbjct: 152 KCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISG 211
Query: 130 -------------------------DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR 164
D F + ++ A L L K IH V G
Sbjct: 212 LVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYES 271
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
++FV+ +LVD+YAKC ++ A+++F +M ++DIVSW+S+I G A +G +EAL ++ M
Sbjct: 272 SLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRML 331
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGR 282
LKP T VG++ AC+ +G + G + + M + ++ NP L T L+D+ ++ G
Sbjct: 332 STGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIK-DYGINPSLQHYTCLLDLLSRSGH 390
Query: 283 MAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
+ +A + + M K D+ W A++S + + + V L ++P + LL
Sbjct: 391 LEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHL--LSLKPEDPSTYILLS 448
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIE-----HYGCMVDLLGRSGQLDEAHE 390
+ + S+S+V L +E Y C+V LG+ Q+ A E
Sbjct: 449 N------IYASAAMWESVSKVRRLMAAMEVKKEPGYSCIV--LGKESQVFLAGE 494
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 164/353 (46%), Gaps = 44/353 (12%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+V L AC + K +H ++ + G + ++ +L+++Y KCG ++ A +F+Q+P
Sbjct: 6 LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGV 252
+D +SW+S++ P L MF M +++ L+P++Y ++ ACA LGA++ G
Sbjct: 66 HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ + + V+ ++L+DMYAKCG VF + K+ + W A++SG + +G
Sbjct: 126 QVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSG 185
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG-LVDEGRQFFNSMSR------VFSL 365
A +F ++ N ++ L+ G +G VD F S+ F L
Sbjct: 186 RKLDAIQLFQKMP----VKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFIL 241
Query: 366 TPMI------------EHYGCMVDLLGRSGQLDEAHELIKSMP---------------ME 398
+ +I + C+V LLG L ++ L+ ++
Sbjct: 242 SSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQ 301
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEPWNSGNYVLLSNIYSASH 449
+ + W +++ G H + A + N++++ L+P N +V L IY+ SH
Sbjct: 302 RDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKP-NEVTFVGL--IYACSH 351
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 130/251 (51%), Gaps = 8/251 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGF-LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I G V + + + + MR++G + F ++ A A LG + H L++
Sbjct: 208 LISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILL 267
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G + FV +L+++Y C + A K+F + +++VSWT+II G G EEA++++
Sbjct: 268 GYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLY 327
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW-IHGYVNEAGKGRNVFVATSLVDLYAK 178
R+L GLKP+ + V ++ AC+ +G +S ++ + + + G ++ T L+DL ++
Sbjct: 328 NRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSR 387
Query: 179 CGNMEKARRVFDQMPEK-DIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPEYYT 234
G++E+A + MP K D +W++++ + + D +++ E+ P Y
Sbjct: 388 SGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPED--PSTYI 445
Query: 235 MVGVLSACASL 245
++ + A A++
Sbjct: 446 LLSNIYASAAM 456
>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 970
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/611 (39%), Positives = 344/611 (56%), Gaps = 33/611 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N CF A+E Y SMR LP +FT + +CA +LG + H +K G
Sbjct: 386 MITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLG 445
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI-NEGNLEEAINMF 119
+D + V +L+ LY G L + K+F +P+ + VSW +II +E +L EA+ F
Sbjct: 446 IDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACF 505
Query: 120 RRLLHRGLKPD--SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
L G K + +FS V + G+L K IHG + +L+ Y
Sbjct: 506 LNALRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKYNIADEATTENALIACYG 563
Query: 178 KCGNMEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
KCG M+ ++F +M E +D V+W+SMI GY N +ALD+ + M + + + +
Sbjct: 564 KCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYA 623
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VLSA AS+ LE G+ + R S+ V+G+ L+DMY+KCGR+ A + F M
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM--- 680
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ + + ++G P+ TFVG+L C+HAGL++EG + F
Sbjct: 681 ------PLFANMKLDGQTP---------------PDHVTFVGVLSACSHAGLLEEGFKHF 719
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLH- 414
SMS + L P IEH+ CM DLLGR+G+LD+ + I+ MPM+PN ++W +L A CR +
Sbjct: 720 ESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANG 779
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
+K +L + L LEP N+ NYVLL N+Y+A +W D K R M D ++K G SW
Sbjct: 780 RKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSW 839
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
V + VH F+ GD SHP ++ IY KL EL K++ AG+VP T L+D+E+E K+ L+
Sbjct: 840 VTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILS 899
Query: 535 CHSEKLALAFGLITTAPKDV-IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF 593
HSEKLA+AF L + IRI KNLRVCGDCH A K ISKI GR+II+RD+NRFH F
Sbjct: 900 YHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKHISKIEGRQIILRDSNRFHHF 959
Query: 594 IEGSCSCKDFW 604
+G CSC DFW
Sbjct: 960 QDGECSCSDFW 970
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 212/450 (47%), Gaps = 22/450 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHD---FQLGVRSHSLIV 57
++ G+ N + A+ F M EG ++ F L+AC +E D G + H L+
Sbjct: 73 VVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRAC-QELDSVGILFGRQIHGLLF 131
Query: 58 KAGLDCDEFVKTSLLNLYVHC-GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAI 116
K D V L+++Y C G L AL+ FDD+ KN VSW +IIS Y G+ A
Sbjct: 132 KLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAF 191
Query: 117 NMFRRLLHRGLKPDSFSIVRVLTACTQLG--DLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
MF + G +P ++ ++T L D+ + I + ++G ++FV + LV
Sbjct: 192 KMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVS 251
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYY 233
+AK G++ AR++F+QM ++ V+ + ++ G + +EA +F +M ++ PE Y
Sbjct: 252 AFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESY 311
Query: 234 TMVGVLSACASLG-ALELGVWASSFMERNEFLSNPV-----LGTTLIDMYAKCGRMAQAC 287
+ +LS+ A E+G+ + + + V +G L++MYAKCG +A A
Sbjct: 312 VI--LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADAR 369
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+VF M +KD V WN++++GL N A + + + I P T + + C
Sbjct: 370 RVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLK 429
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
G+Q S + + ++ L +G L+E ++ SMP E + + W ++
Sbjct: 430 WAKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMP-EHDQVSWNSI 487
Query: 408 LAGCRLHKKTDLAEHV---LNQLIALEPWN 434
+ G + L E V LN L A + N
Sbjct: 488 I-GALASSERSLPEAVACFLNALRAGQKLN 516
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 207/411 (50%), Gaps = 16/411 (3%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
HS + K GL+ D ++ +L+N Y+ G A KVFD++P +N VSW ++SGY G
Sbjct: 24 HSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEH 83
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST--AKWIHGYVNEAGKGRNVFVAT 170
+EA+ R ++ G+ + ++ V L AC +L + + IHG + + + V+
Sbjct: 84 KEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSN 143
Query: 171 SLVDLYAKC-GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
L+ +Y KC G++ A R FD + K+ VSW+S+I Y+ G + A MFY+MQ + +
Sbjct: 144 VLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSR 203
Query: 230 PEYYTMVGVLSACASLGALELGVWASSF--MERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
P YT +++ SL ++ + ++++ FL++ +G+ L+ +AK G + A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHAR 263
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
K+F +M+ ++ V N ++ GL + + A +F + I + ++V LL
Sbjct: 264 KIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYS 322
Query: 348 LVDE-----GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
L +E GR+ + + M+ +V++ + G + +A + M E +++
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMT-EKDSV 381
Query: 403 VWGALLAGCRLHKKTDLAEHVLN-QLIALEPWNSGNYVLLSNIYS-ASHKW 451
W +++ G L + + E V Q + G++ L+S+I S AS KW
Sbjct: 382 SWNSMITG--LDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKW 430
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 198/405 (48%), Gaps = 9/405 (2%)
Query: 14 AIEFYNSMRNEGFLPTNFTF-PFVLKACA-REHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
A + + SM+ +G PT +TF V AC+ E D +L + I K+G D FV + L
Sbjct: 190 AFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGL 249
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLKPD 130
++ + G L A K+F+ + +N V+ ++ G + + EEA +F + + P+
Sbjct: 250 VSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE 309
Query: 131 SFSIVRVLTACTQLGD---LSTAKWIHGYVNEAG-KGRNVFVATSLVDLYAKCGNMEKAR 186
S+ I+ L + L + +HG+V G V + LV++YAKCG++ AR
Sbjct: 310 SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADAR 369
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
RVF M EKD VSW+SMI G N EA++ + +M+R + P +T++ +S+CASL
Sbjct: 370 RVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLK 429
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
+LG + N + L+ +YA+ G + + K+F M + DQV WN+++
Sbjct: 430 WAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIG 489
Query: 307 GL-SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
L S + A F + G + N TF +L + + G+Q + ++ +++
Sbjct: 490 ALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLALKYNI 548
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++ G+ G++D ++ M + + W ++++G
Sbjct: 549 ADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISG 593
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 150/307 (48%), Gaps = 15/307 (4%)
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+G AK H + + G ++V++ +L++ Y + G+ AR+VFD+MP ++ VSW+ +
Sbjct: 14 IGHRGAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACV 73
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL--GVWASSFMERN 261
+ GY+ NG KEAL +M +E + +Y V L AC L ++ + G + +
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKL 133
Query: 262 EFLSNPVLGTTLIDMYAKC-GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ + V+ LI MY KC G + A + F +++ K+ V WN+++S S G + AF +
Sbjct: 134 SYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKM 193
Query: 321 FGQLEKCGIQPNGNTFVGLL---CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
F ++ G +P TF L+ C T V Q ++ + LT + G +V
Sbjct: 194 FYSMQCDGSRPTEYTFGSLVTTACSLTEPD-VRLLEQIMCTIQKSGFLTDLFVGSG-LVS 251
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV---LNQLIALEPWN 434
+SG L A ++ M NA+ L+ G K + A + +N +I + P
Sbjct: 252 AFAKSGSLIHARKIFNQMETR-NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP-- 308
Query: 435 SGNYVLL 441
+YV+L
Sbjct: 309 -ESYVIL 314
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 322/522 (61%), Gaps = 1/522 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A +F+ + + ++V + ++ GY N E ++F +L G+ PD+++ +L AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L + +H + G NV+V +L+++Y +C +++ AR VFD++ E +V +++M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I GYA P EAL +F MQ + LKP T++ VLS+CA LG+L+LG W + +++ F
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ T LIDM+AKCG + A +F +M+ KD W+A++ + +G + + +F +
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
+ +QP+ TF+GLL C+H G V+EGR++F+ M F + P I+HYG MVDLL R+G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
L++A+E I +P+ P ++W LLA C H DLAE V ++ L+ + G+YV+LSN
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 444 IYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDE 503
+Y+ + KW +R +M D+ K+ GCS +EV+ VVHEF GD + K++ LDE
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 501
Query: 504 LATKLKAAGFVPTTDHVLF-DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
+ +LK +G+VP T V+ ++ ++EK+ L HSEKLA+ FGL+ T P IR+ KNLR
Sbjct: 502 MVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLR 561
Query: 563 VCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
VC DCH A KLIS I GR++++RD RFH F +G CSC DFW
Sbjct: 562 VCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 186/325 (57%), Gaps = 8/325 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYN---SMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIV 57
M RG+ F + +E ++ + +G LP N+TFP +LKACA + G + H L +
Sbjct: 100 MARGYSR---FTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSM 156
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
K GLD + +V +L+N+Y C + A VFD I + VV + A+I+GY EA++
Sbjct: 157 KLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALS 216
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+FR + + LKP+ +++ VL++C LG L KWIH Y + + V V T+L+D++A
Sbjct: 217 LFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFA 276
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCG+++ A +F++M KD +WS+MI YA++G ++++ MF M+ EN++P+ T +G
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 238 VLSACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-D 295
+L+AC+ G +E G + S + + + + +++D+ ++ G + A + ++
Sbjct: 337 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS 396
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGV 320
++W +++ S + + +A V
Sbjct: 397 PTPMLWRILLAACSSHNNLDLAEKV 421
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+M AR +F+ M E DIV ++SM +GY+ P E +F + + + P+ YT +L
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACA ALE G + N + TLI+MY +C + A VF + + V
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+NA+++G + A +F +++ ++PN T + +L C G +D G+ + +
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK-WIHKY 255
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
++ S ++ ++D+ + G LD+A + + M + + W A++ H K +
Sbjct: 256 AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAE 313
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/610 (36%), Positives = 349/610 (57%), Gaps = 44/610 (7%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL---------YVHCGYLADALK 86
+L++C+ D ++ H +++ L D FV + LL L + L A
Sbjct: 18 LLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYG 74
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
+F I + N+ + +I + +A + ++L + PD+ + ++ A T++
Sbjct: 75 IFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMEC 134
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYA----------------------------- 177
+ + H + G +V+V SLV +YA
Sbjct: 135 VVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAG 194
Query: 178 --KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
KCG +E AR +FD+MP +++ +WS MI GYA N ++A+D+F M+RE + M
Sbjct: 195 YCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVM 254
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
V V+S+CA LGALE G A ++ ++ N +LGT L+DMY +CG + +A +VF E+ D
Sbjct: 255 VSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPD 314
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
KD + W++++ GL+++G+ A F Q+ + G P T +L C+H GLVD+G +
Sbjct: 315 KDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEI 374
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
+ +M R + + P +EHYGC+VD+LGR+G+L EA I MP++PNA + GALL C+++K
Sbjct: 375 YENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYK 434
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
T++AE V N LI ++P +SG YVLLSNIY+ + +W +R +M +K ++K G S +
Sbjct: 435 NTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLI 494
Query: 476 EVDGVVHEFLVGDNS-HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
E+DG +++F +GD+ HP KI +E+ K++ G+ T FD++EEEK+ +
Sbjct: 495 EIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVDEEEKETAIH 554
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+A+G++ T IRI KNLRVC DCH A KLIS++ GRE IVRD NRFH F
Sbjct: 555 MHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDCHTATKLISEVYGREFIVRDRNRFHHFR 614
Query: 595 EGSCSCKDFW 604
G CSC+D+W
Sbjct: 615 NGLCSCRDYW 624
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 170/319 (53%), Gaps = 34/319 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR F + A FY M P N TFPF++KA +G ++HS IV+ G
Sbjct: 90 LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFG 149
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V+ SL+++Y +CG +A A ++F +P ++VVSWT++++GY G +E+A MF
Sbjct: 150 FQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFD 209
Query: 121 RLLHRGL-----------KPDSFS--------------------IVRVLTACTQLGDLST 149
+ HR L K + F +V V+++C LG L
Sbjct: 210 EMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEF 269
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ H YV ++ N+ + T+LVD+Y +CG +EKA RVF+++P+KD +SWSS+I+G A
Sbjct: 270 GERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAV 329
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+G +A+ F M R P T+ VLSAC+ G ++ G+ M+R ++ P L
Sbjct: 330 HGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKR-DYGIEPRL 388
Query: 270 G--TTLIDMYAKCGRMAQA 286
++DM + G++A+A
Sbjct: 389 EHYGCIVDMLGRAGKLAEA 407
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 150/320 (46%), Gaps = 15/320 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N+CF+ AI+ + M+ EG + V+ +CA + G R+H +VK+
Sbjct: 222 MINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSH 281
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ + + T+L+++Y CG + A++VF+++PDK+ +SW++II G G+ +AI+ F
Sbjct: 282 MTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFS 341
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN-EAGKGRNVFVATSLVDLYAKC 179
+++ G P ++ VL+AC+ G + I+ + + G + +VD+ +
Sbjct: 342 QMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRA 401
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE---YYTMV 236
G + +A +MP K + G E + NM E +KPE YY ++
Sbjct: 402 GKLAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIE-VKPEHSGYYVLL 460
Query: 237 GVLSACASLGALELGVWASSFMERN---EFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
+ ACA G W R+ E L G +LI++ K + +
Sbjct: 461 SNIYACA-------GQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMGDDQKHPE 513
Query: 294 KDKDQVVWNAVVSGLSMNGY 313
K + +W ++ + + GY
Sbjct: 514 MGKIKRLWEEILGKIRLIGY 533
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/596 (35%), Positives = 356/596 (59%), Gaps = 3/596 (0%)
Query: 11 FQHAIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKT 69
++ A+E + E GF T+ ++ AC + R + +V G + D++++
Sbjct: 112 YRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRN 171
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
+L ++V CG + DA ++FD++P +N VSW IISGY++ GN EA +F +
Sbjct: 172 RVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDC 231
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
+ ++ A L + + +H +AG G+++FV+ +L+D+Y+KCG++E A VF
Sbjct: 232 GPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVF 291
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D+MP+K IV W+S+I GYA +G+ +EALD+++ M+ +K +++T ++ C+ L ++
Sbjct: 292 DEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVA 351
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
+ + RN F + V T L+D Y+K G++ A VF M ++ + WNA+++G
Sbjct: 352 RAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYG 411
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G+ + A +F ++ + G+ PN TF+ +L C+ +GL + G + F SM+R + P
Sbjct: 412 NHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRA 471
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
H+ CM++LLGR G LDEA+ LI+ P +P A +W ALL CR+H +L + +L
Sbjct: 472 MHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYG 531
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
+EP NY++L NIY++S K +AA + + KG++ + CSW+EV+ H FL GD
Sbjct: 532 MEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDK 591
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLF-DIEEEEKQYFLACHSEKLALAFGLIT 548
H EK+ K+DEL + G+VP + + D++E E++ + HSEKLA+A+GL+
Sbjct: 592 HHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDENEEKIRMY-HSEKLAIAYGLLN 650
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
T K ++I ++ R+C DCH IKLI+ IT REI++RD +RFH F +GSCSC D+W
Sbjct: 651 TLEKTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 198/364 (54%), Gaps = 5/364 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+V + + A + MR E + TF +++A A G + HS +KAG
Sbjct: 204 IISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAG 263
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D FV +L+++Y CG L DA VFD++PDK +V W +II+GY G EEA++++
Sbjct: 264 LGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYH 323
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+K D F+ ++ C++L ++ AK +H + G G +V T+LVD Y+K G
Sbjct: 324 EMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWG 383
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR VFD+M ++I+SW+++I GY ++G +EA+DMF M RE + P + T + VLS
Sbjct: 384 KVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLS 443
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+ G E G M R+ + + +I++ + G + +A + R+ +
Sbjct: 444 ACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTA 503
Query: 300 -VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG-NTFVGLLCGCTHAGLVDEGRQFFN 357
+W A++ ++G +++ G F + G++P + ++ LL +G + E F
Sbjct: 504 NMWAALLRACRVHGNLEL--GKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQ 561
Query: 358 SMSR 361
++ R
Sbjct: 562 TLKR 565
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/535 (40%), Positives = 315/535 (58%), Gaps = 39/535 (7%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
++++ G + +A ++F +P+KN VSW+A++SGY+ G+L+ A+ F
Sbjct: 140 TMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFY--------- 190
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
A R+V T+++ Y K G +E A R+F
Sbjct: 191 ------------------------------AAPMRSVITWTAMITGYMKFGRVELAERLF 220
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
+M + +V+W++MI GY NG ++ L +F M +KP ++ VL C++L AL+
Sbjct: 221 QEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQ 280
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
LG + + S+ GT+L+ MY+KCG + A ++F ++ KD V WNA++SG +
Sbjct: 281 LGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYA 340
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G K A +F +++K G++P+ TFV +L C HAGLVD G Q+FN+M R F +
Sbjct: 341 QHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKP 400
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
EHY CMVDLLGR+G+L EA +LIKSMP +P+ ++G LL CR+HK +LAE L+
Sbjct: 401 EHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLE 460
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
L+P + YV L+N+Y+A ++W+ A IR M D + KI G SW+E++ VVH F D
Sbjct: 461 LDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDR 520
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
HP I+ KL +L K+K AG+VP + VL D+ EE K+ L HSEKLA+AFGL+
Sbjct: 521 LHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKV 580
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IR+ KNLRVCGDCH A K IS I GREIIVRD RFH F +G CSC+D+W
Sbjct: 581 PLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 137/229 (59%), Gaps = 1/229 (0%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T+++ Y+ G + A ++F ++ + +V+W A+I+GY+ G E+ + +FR +L G+K
Sbjct: 201 TAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVK 260
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
P++ S+ VL C+ L L K +H V + + TSLV +Y+KCG+++ A +
Sbjct: 261 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWEL 320
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F Q+P KD+V W++MI GYA +G K+AL +F M++E LKP++ T V VL AC G +
Sbjct: 321 FIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLV 380
Query: 249 ELGVWASSFMERNEFL-SNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
+LGV + M R+ + + P ++D+ + G++++A + + M K
Sbjct: 381 DLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFK 429
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 129/302 (42%), Gaps = 40/302 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+V N + + + +M G P + VL C+ QLG + H L+ K
Sbjct: 234 MIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCP 293
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D TSL+++Y CG L DA ++F IP K+VV W A+ISGY G ++A+ +F
Sbjct: 294 LSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFD 353
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GLKPD + V VL AC N AG LVDL +
Sbjct: 354 EMKKEGLKPDWITFVAVLLAC----------------NHAG----------LVDLGVQYF 387
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N + + PE ++ M+ G EA+D+ +M KP +L
Sbjct: 388 NTMRRDFGIETKPEH----YACMVDLLGRAGKLSEAVDLIKSMP---FKPHPAIYGTLLG 440
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGT---TLIDMYAKCGRMAQACKVFREMKDKD 297
AC L L + F +N +P + T L ++YA R + R MKD +
Sbjct: 441 ACRIHKNLNL----AEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNN 496
Query: 298 QV 299
V
Sbjct: 497 VV 498
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 143/336 (42%), Gaps = 60/336 (17%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN-GFPKEALDMFYNM 223
NV + L+ Y +CG+++ A RVF+ M K V+W+S++ +A G + A +F +
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99
Query: 224 QREN----------------------------LK--PEYYTMVGVLSA------------ 241
+ N LK + TM+ L+
Sbjct: 100 PQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFS 159
Query: 242 ------CASLGALELGVWASSFMERNE--FLSNP----VLGTTLIDMYAKCGRMAQACKV 289
C S A+ G A ++ F + P + T +I Y K GR+ A ++
Sbjct: 160 AMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERL 219
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F+EM + V WNA+++G NG + +F + + G++PN + +L GC++ +
Sbjct: 220 FQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSAL 279
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
G+Q + + L+ +V + + G L +A EL +P + + + W A+++
Sbjct: 280 QLGKQVHQLVCKC-PLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRK-DVVCWNAMIS 337
Query: 410 GCRLHKKTDLAEHVLNQLI--ALEP-WNSGNYVLLS 442
G H A + +++ L+P W + VLL+
Sbjct: 338 GYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLA 373
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 18/168 (10%)
Query: 248 LELGVWASSFMERNEFLSNPVLGTT-LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
+ L + SS ++EF +N V+ + LI Y +CG + A +VF +MK K V WN++++
Sbjct: 21 VTLSKYVSSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILA 80
Query: 307 GLSMN-GYVKVAFGVFGQLEKCGIQPNGNTF-VGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
+ G+ + A +F ++ QPN ++ + L C H G V + R FF+SM
Sbjct: 81 AFAKKPGHFEYARQLFEKIP----QPNTVSYNIMLACHWHHLG-VHDARGFFDSM----- 130
Query: 365 LTPM--IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
P+ + + M+ L + G + EA L +MP E N + W A+++G
Sbjct: 131 --PLKDVASWNTMISALAQVGLMGEARRLFSAMP-EKNCVSWSAMVSG 175
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/608 (37%), Positives = 346/608 (56%), Gaps = 36/608 (5%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE--FVKTSLLNLYVHCGYLADALKVFDD 90
+ +++ C + R HS I+ + F+ L+ +Y CG L A ++F+
Sbjct: 63 YAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFES 122
Query: 91 IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD--SFSIVRVLTACTQLGDLS 148
+P +NV +WT ++ + + G EA+ FRR+ G +PD +FS++ A +
Sbjct: 123 MPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAID 182
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ----------------- 191
+ IH Y +G NV V T+++ +Y KCG ++ AR F++
Sbjct: 183 QGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYK 242
Query: 192 --------------MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-RENLKPEYYTMV 236
M + D V W++MI YA +G K+ALD++ +M +L P+ T V
Sbjct: 243 LDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFV 302
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
V+ CA L AL+ G + + F +N ++ L+ MY KCG + +A VF MK K
Sbjct: 303 TVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLK 362
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
D++ WN ++S + +G+ A ++ +++ G++P TFVGLL C+H GLV +G +F
Sbjct: 363 DEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYF 422
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
M + P + H+GC++DLLGR G+L EA ++KSMP++ NA+ W +LL C+ H
Sbjct: 423 YRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGD 482
Query: 417 TDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVE 476
+Q++ PW SG YVLLSNIY+A+ +W D KIR +M +G++K G SW+E
Sbjct: 483 LKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIE 542
Query: 477 VDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACH 536
+ VVHEF+ GD+SHP E+IY +L ++ ++K G+VP T V D+EEEEK+ L CH
Sbjct: 543 IGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCH 602
Query: 537 SEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
SEKLA+ +G + K ++RI KNLRVC DCH A K +S+ITGR+I+VRD RFH F G
Sbjct: 603 SEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENG 662
Query: 597 SCSCKDFW 604
SCSC+D+W
Sbjct: 663 SCSCRDYW 670
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 153/347 (44%), Gaps = 38/347 (10%)
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA--GKGRNVF 167
G E + L R L+ D ++ C +S A+ +H ++ + F
Sbjct: 39 GERESLHKSIQLLESRELELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPF 98
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
+A L+++Y KCG + AR +F+ MP +++ +W+ + ++ NG EAL F M +
Sbjct: 99 LANLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSG 158
Query: 228 LKPEYYTMVGVL--SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM-- 283
+P+ T +L A A++ G + + L N V+GT +I MY KCGR+
Sbjct: 159 ERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDD 218
Query: 284 -----------------------------AQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
+A ++FREM D D V WNA+++ + +G
Sbjct: 219 ARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRG 278
Query: 315 KVAFGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
K A ++ + + + P TFV ++ C + +GR ++ R + +
Sbjct: 279 KQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRA-IHARVRATNFDANLLVSN 337
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+V + G+ G LDEA ++ SM ++ + I W +++ H +D A
Sbjct: 338 ALVHMYGKCGCLDEALDVFHSMKLK-DEISWNTIISSYAYHGHSDQA 383
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 3/214 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI + + + A++ Y SM + L P TF V+ CA + G H+ +
Sbjct: 268 MIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRAT 327
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D + V +L+++Y CG L +AL VF + K+ +SW IIS Y G+ ++A+ ++
Sbjct: 328 NFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLY 387
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ + +G+KP + V +L+AC+ G ++ + + ++ +V ++DL +
Sbjct: 388 QEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGR 447
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG 211
G + +A V MP + + V W S++ ++G
Sbjct: 448 GGRLAEAELVLKSMPIQANAVQWMSLLGACKTHG 481
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/504 (41%), Positives = 306/504 (60%), Gaps = 3/504 (0%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
+ Y+ M+ P NFTFPFV ACA + ++ +H + K GLD D S++
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLKPDSF 132
+Y CG A KVFD+I +K++VSW +++SGY G EA+ +F RL G +PD
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
S+V VL AC +LGDL +W+ G+V E G N ++ ++L+ +Y+KCG + +RR+FD M
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
P +D ++W++ I YA NG EA+ +F++M+ + P T+ VLSACAS+GAL+LG
Sbjct: 281 PSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGK 340
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ + + T LIDMYAKCG + A +VF +M K+ WNA++S L+ +G
Sbjct: 341 QMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHG 400
Query: 313 YVKVAFGVFGQLEKCG--IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
K A +F ++ G +PN TFV LL C HAGLVDEG + F+ MS +F L P IE
Sbjct: 401 KAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIE 460
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
HY CMVDLL R+G L EA ++I+ MP +P+ + GAL + C+ K D+ E V+ L+ L
Sbjct: 461 HYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLEL 520
Query: 431 EPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNS 490
+P NSGNY++ S IY + W+DAA++R++M + G+ K GCSW+EV + EFL GD
Sbjct: 521 DPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGL 580
Query: 491 HPLSEKIYSKLDELATKLKAAGFV 514
S + + +D L +LK G++
Sbjct: 581 TLDSIDVRNIIDLLYEELKKEGYL 604
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
I + N AI ++SM+ G P T VL ACA LG + GL
Sbjct: 292 ISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGL 351
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
D FV T+L+++Y CG L A +VF+D+P KN SW A+IS + G +EA+++F R
Sbjct: 352 QHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFER 411
Query: 122 LLHRG--LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEA-GKGRNVFVATSLVDLYAK 178
+ G +P+ + V +L+AC G + + ++ G + + +VDL ++
Sbjct: 412 MSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSR 471
Query: 179 CGNMEKARRVFDQMPEK 195
G++ +A V ++MPEK
Sbjct: 472 AGHLYEAWDVIEKMPEK 488
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/608 (37%), Positives = 351/608 (57%), Gaps = 23/608 (3%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ Y M EG P TF L CA G H I+ + + D+ ++ SLLN
Sbjct: 95 AVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLN 154
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSF 132
+Y+ C + +A KVF+ + +NV S+TA+IS Y+ G EA+ +F R+ ++P+++
Sbjct: 155 MYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAY 214
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ +L A LG+L + +H ++ G NV V +LV +Y KCG+ +AR+VFD M
Sbjct: 215 TFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSM 274
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
++++SW+SMI YA +G P+EAL++F +R +++P + L+ACA LGAL+ G
Sbjct: 275 TARNVISWTSMIAAYAQHGNPQEALNLF---KRMDVEPSGVSFSSALNACALLGALDEG- 330
Query: 253 WASSFMER--NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
R L++P + T+L+ MYA+CG + A +VF MK +D NA+++ +
Sbjct: 331 --REIHHRVVEAHLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQ 388
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+G K A ++ ++E+ GI +G TFV +L C+H LV + R FF S+ + P++E
Sbjct: 389 HGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVE 448
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
HY CMVD+LGRSG+L +A EL+++MP + +A+ W LL+GC+ H + E ++ L
Sbjct: 449 HYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFEL 508
Query: 431 EPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNS 490
P + YV LSN+Y+A+ +++DA ++R M ++G+ S++E+D +H F G
Sbjct: 509 APAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRD 568
Query: 491 HPLS-------EKIYSKLDELATKLKAAGFVPTTDHVLFDIE----EEEKQYFLACHSEK 539
E++ S L EL +K AG+VP T V + + EEEKQ L HSE+
Sbjct: 569 EQQEGHDGRTMERVRSLLLELLEPMKQAGYVPDTREVYLEQQGGTSEEEKQRSLCFHSER 628
Query: 540 LALAFGLITTAPKD---VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
LA+A+GLI D +R+ + RVC DCH AIKL+S I + I VRD NRFH F +G
Sbjct: 629 LAIAYGLIAAKDPDDSRPLRVVNSHRVCSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKG 688
Query: 597 SCSCKDFW 604
+CSC D W
Sbjct: 689 ACSCGDHW 696
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 207/408 (50%), Gaps = 7/408 (1%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M G + F ++ AC + + G R H ++ G D ++T+LL +Y CG
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
L DA +VF+ + K++ +W++IIS Y G E A+ ++RR++ G++P+ + L
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
C + L+ + IH + + ++ + SL+++Y KC M +AR+VF+ M +++ S+
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180
Query: 201 SSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
++MI Y G EAL++F M + E ++P YT +L A LG LE G +
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
F +N V+ L+ MY KCG +A KVF M ++ + W ++++ + +G + A
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F +++ ++P+G +F L C G +DEGR+ + + +P +E ++ +
Sbjct: 301 LFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMY 355
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
R G LD+A + M +A A++A H + A + ++
Sbjct: 356 ARCGSLDDARRVFNRMKTR-DAFSCNAMIAAFTQHGRKKQALRIYRRM 402
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/569 (37%), Positives = 331/569 (58%), Gaps = 23/569 (4%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
+ C + G + H+ +V AG ++ T L+ +Y CG L DA V D +P++NV
Sbjct: 42 ITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNV 101
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
VSWTA+ISGY ++A +F +L G+ K +H +
Sbjct: 102 VSWTAMISGYSQNERPDQAWELFIMMLRAGIH--------------------QVKQVHAF 141
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+ ++FV +SL+D+YAK N+++ARRVFD +P +D+VS+++++ GY G +EA
Sbjct: 142 AVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEA 201
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
LD+F + E ++ T +L+A + L +++ G + R E L +LIDM
Sbjct: 202 LDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDM 261
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNT 335
Y+KCG++ + +VF M ++ V WNA++ G +G +F + C ++P+ T
Sbjct: 262 YSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSM--CDEVKPDSVT 319
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
+ +L G +H GLVDEG F+ + + S EHYGC++DLLGRSGQL +A LI+ M
Sbjct: 320 LLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKM 379
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
P +P +WG+LL CR+H + E V +L+ +EP N+GNYV+LSNIY+A+ W D
Sbjct: 380 PFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVF 439
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
++R +M K + K G SW+ +D V+H F + HP E I +K+ E+ +KAAGFVP
Sbjct: 440 RVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVP 499
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
VL D+++E+K+ L HSEKLA+ FGL++T I++ KNLR+C DCH K +S
Sbjct: 500 DLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVS 559
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K+ GREI +RD NRFH EG+C+C D+W
Sbjct: 560 KVYGREISLRDKNRFHLITEGACTCGDYW 588
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 126/274 (45%), Gaps = 15/274 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ + A++ + + NEG TF +L A + G + H LI++
Sbjct: 188 ILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRE 247
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L ++ SL+++Y CG L + +VFD +P+++VVSW A++ GY G E + +FR
Sbjct: 248 LPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFR 307
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGRNVFVATSLVDLYAKC 179
+ +KPDS +++ VL+ + G + + + V E N ++DL +
Sbjct: 308 SMCDE-VKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRS 366
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE---YYTM 235
G ++KA + ++MP + W S++ A + F + +++PE Y +
Sbjct: 367 GQLQKALNLIEKMPFQPTRAIWGSLLG--ACRVHTNVHVGEFVAQKLLDIEPENAGNYVI 424
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+ + A A G+W F R L V+
Sbjct: 425 LSNIYAAA-------GMWKDVFRVRKLMLKKTVI 451
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/607 (37%), Positives = 352/607 (57%), Gaps = 21/607 (3%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ Y M EG P TF L CA G H I+ + + D+ ++ SLLN
Sbjct: 115 AVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLN 174
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSF 132
+Y+ C + +A KVF+ + +NV S+TA+IS Y+ G EA+ +F R+ ++P+++
Sbjct: 175 MYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAY 234
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ +L A LG+L + +H ++ G NV V +LV +Y KCG+ +AR+VFD M
Sbjct: 235 TFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSM 294
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
++++SW+SMI YA +G P+EAL++F M +++P + L+ACA LGAL+ G
Sbjct: 295 TARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGR 351
Query: 253 WAS-SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+E N L++P + T+L+ MYA+CG + A +VF MK +D NA+++ + +
Sbjct: 352 EIHHRVVEAN--LASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQH 409
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G K A ++ ++E+ GI +G TFV +L C+H LV + R F S+ + P++EH
Sbjct: 410 GRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEH 469
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
Y CMVD+LGRSG+L +A EL+++MP + +A+ W LL+GC+ H D E ++ L
Sbjct: 470 YLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELA 529
Query: 432 PWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSH 491
P + YV LSN+Y+A+ +++DA ++R M ++G+ + S++E+D +H F G
Sbjct: 530 PAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDE 589
Query: 492 PLS-------EKIYSKLDELATKLKAAGFVPTTDHVLFDIE----EEEKQYFLACHSEKL 540
E++ S L EL +K AG+VP T V + + EEEKQ L HSE+L
Sbjct: 590 QQEGHDGRTMERVRSLLVELLEPMKQAGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERL 649
Query: 541 ALAFGLITTAPKD---VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
A+A+GLI D +R+ + RVC CH AIKL+S IT + I VRD +RFH F +G+
Sbjct: 650 AIAYGLIAAKDPDDSRPLRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGA 709
Query: 598 CSCKDFW 604
CSC D W
Sbjct: 710 CSCGDHW 716
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 211/416 (50%), Gaps = 7/416 (1%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+E + M G + F ++ AC + + G R H ++ G D ++T+LL
Sbjct: 13 QALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALL 72
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
+Y CG L DA +VF+ + K++ +W++II+ Y G E A+ ++RR++ G++P+
Sbjct: 73 QMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVV 132
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ L C + L+ + IH + + ++ + SL+++Y KC M +AR+VF+ M
Sbjct: 133 TFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM 192
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELG 251
+++ S+++MI Y G EAL++F M + E ++P YT +L A LG LE G
Sbjct: 193 KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKG 252
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ F +N V+ L+ MY KCG +A KVF M ++ + W ++++ + +
Sbjct: 253 RKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQH 312
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G + A +F +++ ++P+G +F L C G +DEGR+ + + +P +E
Sbjct: 313 GNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQME- 368
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
++ + R G LD+A + M +A A++A H + A + ++
Sbjct: 369 -TSLLSMYARCGSLDDARRVFNRMKTR-DAFSCNAMIAAFTQHGRKKQALRIYRKM 422
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 164/315 (52%), Gaps = 5/315 (1%)
Query: 102 IISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG 161
+I+ + EG +A+ ++ + RG+ D F + ++ ACT+L L + +H ++ G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 162 KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFY 221
++ + T+L+ +YAKCG+++ A+RVF+ M KD+ +WSS+I YA G + A+ ++
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 222 NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
M E ++P T L CAS+ L G + ++ + VL +L++MY KC
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC-GIQPNGNTFVGLL 340
M +A KVF MK ++ + A++S G A +F ++ K I+PN TF +L
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 341 CGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP 399
G +++GR+ + SR F ++++ +V + G+ G EA ++ SM
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQN--ALVTMYGKCGSPVEARKVFDSMTAR- 297
Query: 400 NAIVWGALLAGCRLH 414
N I W +++A H
Sbjct: 298 NVISWTSMIAAYAQH 312
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/481 (44%), Positives = 310/481 (64%), Gaps = 4/481 (0%)
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
L P + +L +C + K +H V AG G + +AT LV+LY C ++ AR
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
+FD++P+ +I W+ +I+GYA NG + A+ ++Y M L P+ +T VL ACA+L
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV---WNA 303
A+E G + + + + +G LIDMYAKCG + A +VF ++ +D V+ WNA
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNA 250
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+++G +M+G+ A +F ++ + +P+ TFVG+L C+H GL++EG FF +M R +
Sbjct: 251 MITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDY 309
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ P ++HY CMVDLLG SG+LDEA+ LI M + P++ VWGALL C++H +L E
Sbjct: 310 KIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIA 369
Query: 424 LNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHE 483
L +LI LEP ++GNYV+LSNIY+ + KW AK+R +M D+ ++K CSW+EV VH
Sbjct: 370 LERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHA 429
Query: 484 FLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALA 543
FL GD SHPLS++IYS+L+ + +K AG+ P+T V D+E++EK + HSE+LA+A
Sbjct: 430 FLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIA 489
Query: 544 FGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDF 603
FGLI+T P + I KNLR+C DCH AIK ISKIT REI VRD NR+H F +G CSC D+
Sbjct: 490 FGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDY 549
Query: 604 W 604
W
Sbjct: 550 W 550
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 164/295 (55%), Gaps = 8/295 (2%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
PT + +L++C + G + H+ + AG D + T L+NLY C L+ A +
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD IP N+ W +I GY G E A+ ++ ++ GL PD+F+ VL AC L +
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD---IVSWSSMI 204
+ IH +V + G ++VFV +L+D+YAKCG + AR VFD++ +D +VSW++MI
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMI 252
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GYA +G EALD+F M R KP++ T VGVLSAC+ G LE G M R ++
Sbjct: 253 TGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIR-DYK 310
Query: 265 SNPVLG--TTLIDMYAKCGRMAQACKVFREMKD-KDQVVWNAVVSGLSMNGYVKV 316
+P + T ++D+ GR+ +A + +MK D VW A+++ ++ V++
Sbjct: 311 IDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVEL 365
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 109/197 (55%), Gaps = 7/197 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ N ++ A++ Y M + G +P NFTFPFVLKACA + G H +V+ G
Sbjct: 147 LIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTG 206
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN---VVSWTAIISGYINEGNLEEAIN 117
+ D FV +L+++Y CG + A +VFD I ++ VVSW A+I+GY G+ EA++
Sbjct: 207 WEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALD 266
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI--HGYVNEAGKGRNVFVATSLVDL 175
+F ++R KPD + V VL+AC+ G L W+ + + V T +VDL
Sbjct: 267 LFEE-MNRVAKPDHITFVGVLSACSH-GGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDL 324
Query: 176 YAKCGNMEKARRVFDQM 192
G +++A + QM
Sbjct: 325 LGHSGRLDEAYNLIMQM 341
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/576 (38%), Positives = 348/576 (60%), Gaps = 14/576 (2%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD------ALKVFD 89
++K C +F+ + H I+K GL D F +S+L C L+D A +F
Sbjct: 38 LVKKCKSLEEFK---QVHVQILKFGLFLDSFCSSSVL---ATCA-LSDWNSMDYACSIFQ 90
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+ + + +I GY+N N E AI ++ +L R ++PD+F+ VL AC +L +
Sbjct: 91 QLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQE 150
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
IHG+V + G +V+V SL+++Y KC ++E + +F +M +K + SWS++I +AS
Sbjct: 151 GMQIHGHVFKLGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHAS 210
Query: 210 NGFPKEALDMFYNMQRENL-KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
E L +F +M RE + E +V VLSAC LGA LG A + +N N
Sbjct: 211 LAMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVA 270
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ T+L+DMY KCG + + +F+ M K+Q+ ++ ++SGL ++GY + A +F ++ + G
Sbjct: 271 VMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEG 330
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
++P+ T+V +L C+H+GLVDEG F+ M + + P ++HYGCMVDL GR+G L+EA
Sbjct: 331 LEPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEA 390
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
+L++SMP++ N ++W +LL+ C++H L E L L N +Y++LSN+Y+ +
Sbjct: 391 FQLVQSMPIKANDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYARA 450
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
+W +AAKIR+ M ++G+ + G S VEV V++F+ D S+ S IY + ++ +L
Sbjct: 451 QQWENAAKIRTKMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGNIYKMIHQMEWQL 510
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
+ G++P T V+ D++EEEK L HS+KLA+AF LI T+ IRI +NLR+C DCH
Sbjct: 511 RFEGYMPDTSQVMLDVDEEEKGERLKGHSQKLAIAFALIHTSQGSAIRIIRNLRMCNDCH 570
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KL+S I REI VRD NRFH F +G+CSC+D+W
Sbjct: 571 SYTKLVSMIYEREITVRDRNRFHHFKDGNCSCRDYW 606
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 180/321 (56%), Gaps = 5/321 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+V+N F++AI YN M P NFT+P VLKACAR Q G++ H + K G
Sbjct: 103 MIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLG 162
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D +V+ SL+N+Y C + + +F + K+V SW+AII+ + + E + +F
Sbjct: 163 LEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFE 222
Query: 121 RLLHRGL-KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G + + +V VL+ACT LG + HG + + NV V TSL+D+Y KC
Sbjct: 223 DMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYVKC 282
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+++K +F M K+ +S+S +I G +G+ ++AL +F M E L+P+ T V VL
Sbjct: 283 GSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSVL 342
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK- 296
SAC+ G ++ G+ M + E+ P + ++D+ + G + +A ++ + M K
Sbjct: 343 SACSHSGLVDEGLDLFDKM-KFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKA 401
Query: 297 DQVVWNAVVSGLSMNGYVKVA 317
+ V+W +++S ++ +K+
Sbjct: 402 NDVLWRSLLSACKVHDNLKLG 422
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 326/540 (60%), Gaps = 6/540 (1%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN-EGNLEEAINMFRRLLH 124
FV SL+++Y G L DAL++F +P +NVVSWT +++ N G +EA+ +
Sbjct: 108 FVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRR 167
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
G+ +S++ VL AC G L+ +H + + G +VFV +SL+D Y K G+++
Sbjct: 168 DGVAANSYTFSSVLGACGTPGVLAA---MHADIIKVGLDSDVFVRSSLIDAYMKLGDLDS 224
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
R VFD+M D+V W+S+I G+A +G A+++F M+ T+ VL AC
Sbjct: 225 GRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTG 284
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
+ LE+G + + + + + +L L+DMY KCG + A +F M D+D + W+ +
Sbjct: 285 MVMLEVGRQVHAHVLKYD--RDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTM 342
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
+SGL+ NG A VF ++ G PN T VG+L C+HAGLV++G +F SM ++F
Sbjct: 343 ISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFG 402
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ P EH CMVDLLGR+G+LDEA + I M EP++++W LL CR+HK LA +
Sbjct: 403 IQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAA 462
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+++ LEP + G +LLSNIY+ +W++A K M D+G++K G SW+E+ +VH F
Sbjct: 463 TEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVF 522
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
+ G+ SHP S++I +L+ L + K G+VP T+ VL D+ E+K+ L HSEKLA+AF
Sbjct: 523 IAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAF 582
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
G + + +RI KNLR+CGDCH KL+SK G+ II+RD RFH F G CSC D+W
Sbjct: 583 GTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 164/311 (52%), Gaps = 13/311 (4%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS--HSLIVKAGLDCDEFVKT 69
+ A+ F MR +G ++TF VL AC GV + H+ I+K GLD D FV++
Sbjct: 156 KEALRFLVEMRRDGVAANSYTFSSVLGACGTP-----GVLAAMHADIIKVGLDSDVFVRS 210
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
SL++ Y+ G L VFD++ ++V W +II+G+ G+ A+ +F R+ G
Sbjct: 211 SLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLA 270
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
+ ++ VL ACT + L + +H +V + R++ + +L+D+Y KCG + A +F
Sbjct: 271 NQGTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALF 328
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
+M ++D++SWS+MI G A NG EAL +F M+ E P TMVGVL AC+ G +E
Sbjct: 329 SRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVE 388
Query: 250 LGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVS 306
G W F P ++D+ + G++ +A K EMK + D V+W ++
Sbjct: 389 DG-WHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLG 447
Query: 307 GLSMNGYVKVA 317
M+ +A
Sbjct: 448 ACRMHKNATLA 458
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 172/357 (48%), Gaps = 15/357 (4%)
Query: 100 TAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN- 158
+I S +G A+ + + G++ D S+ R++ C + G + + IH +V+
Sbjct: 35 VSIFSRLCLDGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSL 94
Query: 159 -----EAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA-SNGF 212
++FV+ SLV +YAK G ++ A +F MP++++VSW++++ A + G
Sbjct: 95 CAHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGR 154
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
KEAL M+R+ + YT VL AC + G L + + + S+ + ++
Sbjct: 155 KKEALRFLVEMRRDGVAANSYTFSSVLGACGTPGVLAA---MHADIIKVGLDSDVFVRSS 211
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
LID Y K G + VF EM D VVWN++++G + +G A +F ++++ G N
Sbjct: 212 LIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLAN 271
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
T +L CT +++ GRQ + V + + ++D+ + G L +A L
Sbjct: 272 QGTLTSVLRACTGMVMLEVGRQVH---AHVLKYDRDLILHNALLDMYCKCGCLLDADALF 328
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
M + + I W +++G + ++ A V + + A P N ++ +++ SH
Sbjct: 329 SRM-HDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGP-TPNNITMVGVLFACSH 383
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 4/206 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GF + A+E + M+ GFL T VL+AC ++G + H+ ++K
Sbjct: 243 IIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK-- 300
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D + +LL++Y CG L DA +F + D++V+SW+ +ISG G EA+ +F
Sbjct: 301 YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFD 360
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G P++ ++V VL AC+ G + + G +VDL +
Sbjct: 361 LMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRA 420
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMI 204
G +++A + +M E D V W +++
Sbjct: 421 GKLDEAMKFIGEMKFEPDSVIWRTLL 446
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/558 (38%), Positives = 346/558 (62%), Gaps = 34/558 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + + Q+++ Y M P+NFTFPFVLKAC+ G + H+ +++ G
Sbjct: 64 LIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLG 123
Query: 61 LDCDEFVKTSLLNLYVHC-------------------------------GYLADALKVFD 89
D FV SL+++Y C G + A +F+
Sbjct: 124 FGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFE 183
Query: 90 DIP-DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG--LKPDSFSIVRVLTACTQLGD 146
++P +NVV WTA+I+GY EG+ E +++FR++L ++P++ ++V +L+AC+ L +
Sbjct: 184 EMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCN 243
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
+++ +++ N + T+L+D+Y+KCG++EKA R+FD + K++ SW+++I G
Sbjct: 244 YEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITG 303
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
G +EA+D++ +M+ +++KP T+V VLSACA LGALELG ++ RN N
Sbjct: 304 CVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLN 363
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
+L T L+DMYAKCG++ AC +F + +KD +WNA++ GL+ +G + + VF Q+ +
Sbjct: 364 VILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVR 423
Query: 327 CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLD 386
G+QPN TF+G+L C H+GLV+EGR F+SM+ L+P +EHY CMVDLLGR+G L
Sbjct: 424 AGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLK 483
Query: 387 EAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYS 446
EA+EL+++M + P++I+WGALL+ CR+H+ +LA+ + ++A + N G +LLSNIY+
Sbjct: 484 EAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFCILLSNIYA 543
Query: 447 ASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELAT 506
+S +W D A++R + +K I+K GCSWVEVDGVVH F+V D +H S +IY + L
Sbjct: 544 SSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGEIYGAYEILVN 603
Query: 507 KLKAAGFVPTTDHVLFDI 524
LKA G+V D + +I
Sbjct: 604 HLKAEGYVANFDFIANNI 621
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 187/376 (49%), Gaps = 36/376 (9%)
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
V D P SW ++I Y G+ + ++ ++ ++L KP +F+ VL AC+ LG
Sbjct: 49 VLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGS 108
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
+ + IH +V G G ++FV SL+D+Y KC ++ AR +D M +D VSW+S+I G
Sbjct: 109 VLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISG 168
Query: 207 YASNGFPKEALDMFYNM-QREN---------------------------------LKPEY 232
Y G ++A D+F M R N ++P
Sbjct: 169 YVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNA 228
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
TMV +LSAC++L E+G + S F++ N+ N +L T LIDMY+KCG + +A ++F
Sbjct: 229 ATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDG 288
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
+ K+ WNA+++G G ++ A ++ ++ ++PN T V +L C G ++ G
Sbjct: 289 VSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELG 348
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
R+ + R L + +VD+ + G++D+A LI E + +W A++ G
Sbjct: 349 REVHLYLGR-NGLDLNVILATALVDMYAKCGKIDDAC-LIFVKTSEKDVALWNAMILGLA 406
Query: 413 LHKKTDLAEHVLNQLI 428
H + V +Q++
Sbjct: 407 YHGDGRDSLAVFSQMV 422
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 164/356 (46%), Gaps = 60/356 (16%)
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
S++R T+ TQ+ + IHG + + L+DL++ ++ AR V DQ
Sbjct: 3 LSLLRTATSLTQIHQIHAQTLIHGLPLQT------HLIPKLIDLHS----IDYARFVLDQ 52
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
P SW+S+I+ Y +G P+ +L ++ M R + KP +T VL AC++LG++ G
Sbjct: 53 TPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEG 112
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + R F S+ + +LIDMY KC R+ A + +M +D+V WN+++SG
Sbjct: 113 EQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQW 172
Query: 312 GYVKVAFGVFGQLE----------------KCG------------------IQPNGNTFV 337
G V+ A +F ++ K G +QPN T V
Sbjct: 173 GQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMV 232
Query: 338 GLLCGCTHAGLVDEGR--QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
LL C+ + GR F ++++ T ++ ++D+ + G +++A + +
Sbjct: 233 CLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVT---ALIDMYSKCGDVEKAWRIFDGV 289
Query: 396 PMEPNAIVWGALLAGC----RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
+ N W A++ GC L + DL H+ Q +++P N + L N+ SA
Sbjct: 290 SCK-NLPSWNAIITGCVQGGLLEEAIDLYRHMKAQ--SVKP----NEITLVNVLSA 338
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/581 (38%), Positives = 344/581 (59%), Gaps = 10/581 (1%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE--FVKTSLLNLYVHCGYLADALKVF- 88
+ L AC + G + H ++++ E +KT L+ LY CG + +A +VF
Sbjct: 72 SISLFLHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQ 131
Query: 89 --DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
D+ P + V W A+ GY G EA+ ++R +L +KP +F+ L AC+ L +
Sbjct: 132 IDDEKPPEEPV-WVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDN 190
Query: 147 LSTAKWIHGYV--NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
+ IH + ++ G+ V V +L+ LY + G ++ +VF++MP++++VSW+++I
Sbjct: 191 ALVGRAIHAQIVKHDVGEADQV-VNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLI 249
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G+A G E L F MQRE + + T+ +L CA + AL G + ++
Sbjct: 250 AGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKN 309
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
++ L +L+DMYAKCG + KVF M KD WN +++G S+NG + A +F ++
Sbjct: 310 ADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEM 369
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ GI+PNG TFV LL GC+H+GL EG++ F+++ + F + P +EHY C+VD+LGRSG+
Sbjct: 370 IRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGK 429
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
DEA + +++PM P+ +WG+LL CRL+ LAE V +L +EP N GNYV+LSNI
Sbjct: 430 FDEALSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNI 489
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL-DE 503
Y+ + W D ++R MM G++K GCSW+++ +H F+ G +S Y K+ +E
Sbjct: 490 YANAGMWEDVKRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKIWNE 549
Query: 504 LATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRV 563
L+ +K G+VP T VL DI EE K ++ HSE+LA F LI T IRI KNLRV
Sbjct: 550 LSNAVKNLGYVPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLRV 609
Query: 564 CGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
C DCH +K +SK+T R I++RD NRFH F GSCSCKD+W
Sbjct: 610 CVDCHSWMKAVSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 198/380 (52%), Gaps = 14/380 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M G+ N A+ Y M + P NF F LKAC+ + +G H+ IVK
Sbjct: 146 MAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHD 205
Query: 61 L-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ + D+ V +LL LYV G + LKVF+++P +NVVSW +I+G+ +G + E ++ F
Sbjct: 206 VGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAF 265
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R + G+ ++ +L C Q+ L + K IHG + ++ K +V + SL+D+YAKC
Sbjct: 266 RVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMYAKC 325
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + +VFD+M KD+ SW++M+ G++ NG EAL +F M R ++P T V +L
Sbjct: 326 GEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALL 385
Query: 240 SACASLGALELGVWA-SSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK 296
S C+ G G S+ M+ +F P L L+D+ + G+ +A V + +
Sbjct: 386 SGCSHSGLTSEGKRLFSNVMQ--DFGVQPSLEHYACLVDILGRSGKFDEALSVAENIPMR 443
Query: 297 DQ-VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG-NTFVGLLCGCTHAGLVDEGRQ 354
+W ++++ + G V +A V +L + I+PN +V L +AG+ ++ ++
Sbjct: 444 PSGSIWGSLLNSCRLYGNVALAEVVAERLFE--IEPNNPGNYVMLSNIYANAGMWEDVKR 501
Query: 355 FFNSMSRVFSLTPMIEHYGC 374
+ + +LT M + GC
Sbjct: 502 ----VREMMALTGMKKDAGC 517
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/577 (37%), Positives = 338/577 (58%), Gaps = 8/577 (1%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L C++ G + H ++ K G D V S++++Y CG + +A +VF+ +P +N
Sbjct: 10 ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRN 69
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
V+SW A+I+GY NE N EEA+N+FR + +G PD ++ L AC+ IH
Sbjct: 70 VISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHA 129
Query: 156 YVNEAGKG--RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
+ G VA +LVDLY KC M +AR+VFD++ EK ++SWS++I GYA
Sbjct: 130 ALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNL 189
Query: 214 KEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF-LSNPVLGTT 272
KEA+D+F ++ + + + + ++ A LE G ++ + + L + +
Sbjct: 190 KEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANS 249
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
++DMY KCG +A +FREM +++ V W +++G +G A +F ++++ GI+P+
Sbjct: 250 VLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPD 309
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
T++ +L C+H+GL+ EG+++F+ + + P +EHY CMVDLLGR G+L EA LI
Sbjct: 310 SVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLI 369
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
+ MP++PN +W LL+ CR+H ++ + V L+ E N NYV++SN+Y+ + W
Sbjct: 370 EKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWK 429
Query: 453 DAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAA- 511
++ KIR + KG++K G SWVE+D +H F GD HPL E+I+ L E+ ++K
Sbjct: 430 ESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEM 489
Query: 512 GFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPK----DVIRIAKNLRVCGDC 567
G+V + + L D+EEE K L HSEKLA+ L+ K VIRI KNLRVCGDC
Sbjct: 490 GYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRVCGDC 549
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H IK +SK+ +VRD NRFH F G CSC D+W
Sbjct: 550 HAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 206/409 (50%), Gaps = 17/409 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + A+ + MR +G +P +T+ LKAC+ G++ H+ +++ G
Sbjct: 76 MIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHG 135
Query: 61 LD--CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
V +L++LYV C +A+A KVFD I +K+V+SW+ +I GY E NL+EA+++
Sbjct: 136 FPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDL 195
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG-RNVFVATSLVDLYA 177
FR L + D F + ++ L K +H Y + G + VA S++D+Y
Sbjct: 196 FRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYM 255
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCG +A +F +M E+++VSW+ MI GY +G +A+++F MQ ++P+ T +
Sbjct: 256 KCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLA 315
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMKDK 296
VLSAC+ G ++ G S + N+ + V ++D+ + GR+ +A + +M K
Sbjct: 316 VLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLK 375
Query: 297 DQV-VWNAVVSGLSMNGYVKVAFGVFGQ--LEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
V +W ++S M+G V++ V G+ L + G P V + HAG E
Sbjct: 376 PNVGIWQTLLSVCRMHGDVEMGKQV-GEILLRREGNNPANYVMVSNM--YAHAGYWKESE 432
Query: 354 QFFNSMSRV-------FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
+ ++ R S M + + G ++E HE++K M
Sbjct: 433 KIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEM 481
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 156/302 (51%), Gaps = 7/302 (2%)
Query: 136 RVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
++L C++ L K +HG V + G V S++D+Y+KCG + +A RVF+ +P +
Sbjct: 9 KILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVR 68
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
+++SW++MI GY + +EAL++F M+ + P+ YT L AC+ A G+
Sbjct: 69 NVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIH 128
Query: 256 SFMERNEF--LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ + R+ F L+ + L+D+Y KC RMA+A KVF +++K + W+ ++ G +
Sbjct: 129 AALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDN 188
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHY 372
+K A +F +L + + +G ++ L+++G+Q +V + L M
Sbjct: 189 LKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEM-SVA 247
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--AL 430
++D+ + G EA L + M +E N + W ++ G H + A + N++ +
Sbjct: 248 NSVLDMYMKCGLTVEADALFREM-LERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGI 306
Query: 431 EP 432
EP
Sbjct: 307 EP 308
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/636 (35%), Positives = 351/636 (55%), Gaps = 43/636 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + + A+ M N G + T+ L ACA+ G + H+ ++++
Sbjct: 265 MVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSL 324
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V ++++ LY CG +A +VF + D+N VSWT +I G++ G E++ +F
Sbjct: 325 PCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFN 384
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + D F++ +++ C+ D+ A+ +H ++G R V ++ SL+ +YAKCG
Sbjct: 385 QMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCG 444
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK----------- 229
N++ A +F M E+DIVSW+ M+ Y+ G +A + F M N+
Sbjct: 445 NLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQ 504
Query: 230 ---------------------PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
P++ T V + CA +GA +LG + + + +
Sbjct: 505 HGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTS 564
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ +I MY+KCGR+++A K+F + KD V WNA+++G S +G K A +F + K G
Sbjct: 565 VMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKG 624
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEA 388
+P+ ++V +L C+H+GLV EG+ +F+ + R +++P +EH+ CMVDLL R+G L EA
Sbjct: 625 AKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEA 684
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
LI MPM+P A VWGALL+ C+ H +LAE L L+ +SG Y+LL+ IY+ +
Sbjct: 685 KNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADA 744
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
K D+A++R +M DKGI+K G SW+EV VH F D SHP I KLDEL K+
Sbjct: 745 GKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKI 804
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCH 568
G+V T+ + +I HSEKLA+AFG++ I I KNLR+CGDCH
Sbjct: 805 AQLGYV-RTESLRSEIH----------HSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCH 853
Query: 569 EAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IKLIS +TGRE ++RD RFH F GSCSC D+W
Sbjct: 854 TVIKLISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 222/492 (45%), Gaps = 66/492 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+ + F A+E + SMR G LP FTF +K+C ++ ++ L+ K
Sbjct: 132 LMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKF 191
Query: 60 GLDCDEFVKTSLLNLYVHCG------------------------------YLAD-ALKVF 88
G D V T +++++V CG Y D AL++F
Sbjct: 192 GFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELF 251
Query: 89 DDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
+ +P+++VVSW ++S G EA+++ + +RG++ DS + LTAC +L L
Sbjct: 252 ESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLG 311
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
K +H V + + +VA+++V+LYAKCG ++ARRVF + +++ VSW+ +I G+
Sbjct: 312 WGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFL 371
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
G E+L++F M+ E + + + + ++S C++ + L S ++ V
Sbjct: 372 QYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVV 431
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA----------- 317
+ +LI MYAKCG + A +F M+++D V W +++ S G + A
Sbjct: 432 ISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRN 491
Query: 318 -------FGVFGQ--------------LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
G + Q L + + P+ T+V L GC G G Q
Sbjct: 492 VITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQIT 551
Query: 357 NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+V L ++ + + G++ EA ++ + + + W A++ G H
Sbjct: 552 GHTVKV-GLILDTSVMNAVITMYSKCGRISEARKIFDFLS-RKDLVSWNAMITGYSQHGM 609
Query: 417 TDLAEHVLNQLI 428
A + + ++
Sbjct: 610 GKQAIEIFDDML 621
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 171/372 (45%), Gaps = 34/372 (9%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK-P 129
++N Y G L+DA ++F +P ++V SW ++SGY G +A+ F + G P
Sbjct: 101 MMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLP 160
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
++F+ + +C LG A + G + + G + VAT +VD++ +CG ++ A + F
Sbjct: 161 NAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQF 220
Query: 190 DQ-------------------------------MPEKDIVSWSSMIQGYASNGFPKEALD 218
Q MPE+D+VSW+ M+ + +G +EAL
Sbjct: 221 SQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALS 280
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
+ +M ++ + T L+ACA L +L G + + R+ +P + + ++++YA
Sbjct: 281 VAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYA 340
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
KCG +A +VF ++D++ V W ++ G G + +F Q+ + +
Sbjct: 341 KCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALAT 400
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
++ GC++ + RQ +S+S T + ++ + + G L A + SM E
Sbjct: 401 IISGCSNRMDMCLARQ-LHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSME-E 458
Query: 399 PNAIVWGALLAG 410
+ + W +L
Sbjct: 459 RDIVSWTGMLTA 470
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 144/325 (44%), Gaps = 43/325 (13%)
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
RL+ GL F +L A G L A+ + G + E NV +++ YAK
Sbjct: 53 RLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEP----NVITHNIMMNGYAKL 108
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGV 238
G++ A +F +MP +D+ SW++++ GY +G +A++ F +M+R + P +T
Sbjct: 109 GSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCA 168
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK---------- 288
+ +C +LG E+ + + + F +P + T ++DM+ +CG + A K
Sbjct: 169 MKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTV 228
Query: 289 ---------------------VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+F M ++D V WN +VS LS +G + A V +
Sbjct: 229 FCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNR 288
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY--GCMVDLLGRSGQL 385
G++ + T+ L C + G+Q ++V P I+ Y MV+L + G
Sbjct: 289 GVRLDSTTYTSSLTACAKLSSLGWGKQLH---AQVIRSLPCIDPYVASAMVELYAKCGCF 345
Query: 386 DEAHELIKSMPMEPNAIVWGALLAG 410
EA + S+ + N + W L+ G
Sbjct: 346 KEARRVFSSLR-DRNTVSWTVLIGG 369
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
N + +++ YAK G ++ A ++F M +D WN ++SG +G A F +
Sbjct: 94 NVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMR 153
Query: 326 KCGIQ-PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ G PN TF + C G + Q +++ F + +VD+ R G
Sbjct: 154 RSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTK-FGFQGDPDVATGIVDMFVRCGA 212
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
+D A + + P ++LAG + K+ +H L ++ + ++ ++ +
Sbjct: 213 VDFASKQFSQIE-RPTVFCRNSMLAG---YAKSYGVDHALELFESMPERDVVSWNMMVSA 268
Query: 445 YSASHKWNDAAKIRSMMGDKGIQ 467
S S + +A + M ++G++
Sbjct: 269 LSQSGRAREALSVAVDMHNRGVR 291
>gi|225432322|ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/558 (39%), Positives = 341/558 (61%), Gaps = 5/558 (0%)
Query: 52 SHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGN 111
SH+ ++K+G D F L+N YV DA ++F+++ + NV+S+T++++G+I G
Sbjct: 49 SHTNVLKSGFLNDTFTTNHLINSYVRIRRTNDASQLFEEMREPNVISFTSLMAGFIKVGR 108
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
+ A+ +F ++L + P++F+ V+ AC+ L DL T + IH +V G N+ V +S
Sbjct: 109 PKSALLIFCKMLESWVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQCNLVVCSS 168
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK-P 230
L+D+Y KC N++ ARRVFD M +++VSW+SMI Y N + AL +F L P
Sbjct: 169 LIDMYGKCNNVDDARRVFDGMDYRNVVSWTSMITAYGQNALGECALQLFREFNGLPLSSP 228
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
++ + V++ACASLG L G A + + R SN V+ + L+DMYAKCG + + KVF
Sbjct: 229 NHFMLASVINACASLGRLVSGKVAHAAVIRRGHESNDVVASALVDMYAKCGCIGYSDKVF 288
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
R + D + + +++ G + G K + +F ++ I+PN TFVG+L C+H+GLVD
Sbjct: 289 RRIPDPSVIPYTSMIVGAAKYGLGKFSLDIFKEMLDRRIKPNDVTFVGVLHACSHSGLVD 348
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN--AIVWGALL 408
+G ++ +SM + + P +HY C+VD+LGR+G+LDEAH+L KS+ +EP+ A++WG LL
Sbjct: 349 DGLEYLHSMHKKHGVVPDTKHYTCVVDMLGRTGRLDEAHQLAKSIQVEPDQGALLWGTLL 408
Query: 409 AGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQK 468
+ RL+ + D+A LI + YV +SN Y+ + KW + IR M G+ K
Sbjct: 409 SASRLYGRVDIAVEASKWLIESNQQVAAAYVTMSNTYAMAGKWENVHSIRYEMKHYGVYK 468
Query: 469 IRGCSWVEVDGVVHEFLVGDNSH-PLSEKIYSKLDELATKLKAAGFVPTTDHVL-FDIEE 526
GCSWVE+ + F GD S ++ S L EL ++K G+V + ++ D+EE
Sbjct: 469 EPGCSWVEIRDSAYVFYAGDVSLCARGSEVASLLRELERRMKERGYVGGSRGLVSIDVEE 528
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
E K+ + HSE+LALAFGLI+ IR+ KNLR+C DCHEA KLIS+I R+ +VRD
Sbjct: 529 EAKEEIVGLHSERLALAFGLISIPKGVTIRVMKNLRMCRDCHEAFKLISEIVERDFVVRD 588
Query: 587 NNRFHCFIEGSCSCKDFW 604
NRFH F GSC+C+DFW
Sbjct: 589 VNRFHHFENGSCTCRDFW 606
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 176/324 (54%), Gaps = 9/324 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GF+ + A+ + M LP FTF V+ AC+ D + G + HS + G
Sbjct: 99 LMAGFIKVGRPKSALLIFCKMLESWVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFG 158
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ C+ V +SL+++Y C + DA +VFD + +NVVSWT++I+ Y E A+ +FR
Sbjct: 159 VQCNLVVCSSLIDMYGKCNNVDDARRVFDGMDYRNVVSWTSMITAYGQNALGECALQLFR 218
Query: 121 RLLHRGL---KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
GL P+ F + V+ AC LG L + K H V G N VA++LVD+YA
Sbjct: 219 EF--NGLPLSSPNHFMLASVINACASLGRLVSGKVAHAAVIRRGHESNDVVASALVDMYA 276
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCG + + +VF ++P+ ++ ++SMI G A G K +LD+F M +KP T VG
Sbjct: 277 KCGCIGYSDKVFRRIPDPSVIPYTSMIVGAAKYGLGKFSLDIFKEMLDRRIKPNDVTFVG 336
Query: 238 VLSACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-- 294
VL AC+ G ++ G+ + S +++ + + T ++DM + GR+ +A ++ + ++
Sbjct: 337 VLHACSHSGLVDDGLEYLHSMHKKHGVVPDTKHYTCVVDMLGRTGRLDEAHQLAKSIQVE 396
Query: 295 -DKDQVVWNAVVSGLSMNGYVKVA 317
D+ ++W ++S + G V +A
Sbjct: 397 PDQGALLWGTLLSASRLYGRVDIA 420
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 129/266 (48%), Gaps = 3/266 (1%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D+++ + H V ++G + F L++ Y + A ++F++M E +++S++S++
Sbjct: 42 DITSVSFSHTNVLKSGFLNDTFTTNHLINSYVRIRRTNDASQLFEEMREPNVISFTSLMA 101
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
G+ G PK AL +F M + P +T V++AC+ L L G S +E
Sbjct: 102 GFIKVGRPKSALLIFCKMLESWVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQC 161
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
N V+ ++LIDMY KC + A +VF M ++ V W ++++ N + A +F +
Sbjct: 162 NLVVCSSLIDMYGKCNNVDDARRVFDGMDYRNVVSWTSMITAYGQNALGECALQLFREFN 221
Query: 326 KCGI-QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ PN ++ C G + G+ ++ R + + +VD+ + G
Sbjct: 222 GLPLSSPNHFMLASVINACASLGRLVSGKVAHAAVIRRGHESNDVV-ASALVDMYAKCGC 280
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAG 410
+ + ++ + +P +P+ I + +++ G
Sbjct: 281 IGYSDKVFRRIP-DPSVIPYTSMIVG 305
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/225 (18%), Positives = 104/225 (46%), Gaps = 3/225 (1%)
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
+ R+N ++T ++ + ++ + + ++ FL++ LI+ Y + R
Sbjct: 18 ISRQNKLSHFHTKTQLIQRLQDCNDITSVSFSHTNVLKSGFLNDTFTTNHLINSYVRIRR 77
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
A ++F EM++ + + + ++++G G K A +F ++ + + PN TF ++
Sbjct: 78 TNDASQLFEEMREPNVISFTSLMAGFIKVGRPKSALLIFCKMLESWVLPNAFTFATVVNA 137
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
C+ + G Q +S +F + + ++D+ G+ +D+A + M N +
Sbjct: 138 CSMLADLRTG-QKIHSHVEMFGVQCNLVVCSSLIDMYGKCNNVDDARRVFDGMDYR-NVV 195
Query: 403 VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
W +++ + + A + + L P +S N+ +L+++ +A
Sbjct: 196 SWTSMITAYGQNALGECALQLFREFNGL-PLSSPNHFMLASVINA 239
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/513 (43%), Positives = 314/513 (61%), Gaps = 34/513 (6%)
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G P+ ++ V V AC + + I + + G N+FV +++ +YA G +++A
Sbjct: 27 GFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEA 86
Query: 186 RRVFD-------------------------------QMPEKDIVSWSSMIQGYASNGFPK 214
RRVFD +M E+D+VSW+++I GY G K
Sbjct: 87 RRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFK 146
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
EALD+F+ M + P +T+ L+ACA+L AL+ G W +++++E N L +L+
Sbjct: 147 EALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLL 206
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVW--NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
DMYAKCG + A KVF + VW NA++ G +M+G K A +F Q++ + PN
Sbjct: 207 DMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPN 266
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
TFV LL C+H LV+EGR +F SM+ + + P IEHYGCMVDLLGRSG L EA E +
Sbjct: 267 KVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETV 326
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
+MPM P+A +WGALL CR+HK + + + + L+ + G +VLL+N+YSAS +W+
Sbjct: 327 FNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWD 386
Query: 453 DAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAG 512
+A +R + G +K GCS +E++GV H+FLVGD SHP ++++Y LDE+ TKLK AG
Sbjct: 387 EAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAG 446
Query: 513 FVPTTDHVLFDI-EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAI 571
+VP VL DI +EE+K+ L+ HSEKLA+AFGLI T P IRI KNLRVC DCHEA
Sbjct: 447 YVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEAT 506
Query: 572 KLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K ISK+ REIIVRD R+H F +G CSCKD+W
Sbjct: 507 KFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 165/328 (50%), Gaps = 43/328 (13%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACA-----------REHDFQLGVRSHSLIVKA------ 59
F + +R GFLP +TF FV KAC R H ++G+ S+ + A
Sbjct: 19 FLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYA 78
Query: 60 --------------GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISG 105
LD D + ++ YV G + A ++FD++ +++VVSWT II+G
Sbjct: 79 NWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAG 138
Query: 106 YINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
Y+ G +EA+++F +L G P+ F++ L AC L L +WIH Y++++ N
Sbjct: 139 YVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMN 198
Query: 166 VFVATSLVDLYAKCGNMEKARRVF-DQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNM 223
+ SL+D+YAKCG ++ A +VF D+ K + W++MI GYA +G KEA+D+F M
Sbjct: 199 ERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQM 258
Query: 224 QRENLKPEYYTMVGVLSACASLGALELG-----VWASSFMERNEFLSNPVLGTTLIDMYA 278
+ E + P T V +L+AC+ +E G ASS+ E ++D+
Sbjct: 259 KVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHY----GCMVDLLG 314
Query: 279 KCGRMAQACK-VFREMKDKDQVVWNAVV 305
+ G + +A + VF D +W A++
Sbjct: 315 RSGLLKEAEETVFNMPMAPDATIWGALL 342
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+V CF+ A++ ++ M G P FT L ACA G H I K+
Sbjct: 135 IIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSE 194
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINM 118
+ +E + SLL++Y CG + A KVF D V W A+I GY G +EAI++
Sbjct: 195 IKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDL 254
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS------- 171
F ++ + P+ + V +L AC+ HG + E G+G +A+S
Sbjct: 255 FEQMKVEKVSPNKVTFVALLNACS-----------HGKLVEEGRGYFKSMASSYGIEPEI 303
Query: 172 -----LVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+VDL + G +++A MP D W +++
Sbjct: 304 EHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALL 342
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 46/251 (18%)
Query: 216 ALDMFYNMQR-ENLKPEYYTMVGVLSACAS-LGALE---LGVWASSF-MERNEFLSNPVL 269
++ +F +M R P YT V V AC + LG LE + V A +E N F++N
Sbjct: 15 SMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTN--- 71
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS-------------------- 309
+I MYA G + +A +VF D+D WN ++ G
Sbjct: 72 --AMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDV 129
Query: 310 ------MNGYVKV-----AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
+ GYV+V A +F ++ + G PN T L C + +D+GR
Sbjct: 130 VSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVY 189
Query: 359 MSRVFSLTPMIEH-YGCMVDLLGRSGQLDEAHELI-KSMPMEPNAIVWGALLAGCRLHKK 416
+ + S M E ++D+ + G++D A ++ ++ W A++ G +H K
Sbjct: 190 IDK--SEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGK 247
Query: 417 TDLAEHVLNQL 427
+ A + Q+
Sbjct: 248 SKEAIDLFEQM 258
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/610 (37%), Positives = 350/610 (57%), Gaps = 6/610 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE--GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
M+ G+ N A M+ E G T VL C+ + H+ +V+
Sbjct: 240 MLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVR 299
Query: 59 AGLD-CDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
GL + V +L+ Y CG L A +VFD I K V SW A+I + G AI
Sbjct: 300 RGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIE 359
Query: 118 MFRRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
+FR + + G KPD FSI +L AC L L K HG++ G ++ F+ SL+ +Y
Sbjct: 360 LFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVY 419
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK--PEYYT 234
+CG AR +FD + EKD VSW++MI GY+ NG P E+L +F MQ + P
Sbjct: 420 IQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLA 479
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
L AC+ L A+ LG F + + + L +++IDMY+KCG + A F +K
Sbjct: 480 ATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLK 539
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
KD V W +++G ++NG K A G++ ++ + G++P+G T++GLL C HAG++++G
Sbjct: 540 AKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLC 599
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
FF M + + +EHY C++ +L R+G+ +A L++ MP EP+A + ++L+ C +H
Sbjct: 600 FFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMH 659
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
+ +L + V ++L+ LEP + +YVL SN+Y+ S +W++ K+R M+ D G+ K GCSW
Sbjct: 660 GEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSW 719
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+++ G V+ F+ G+NS P K+ L K++AAG+ P T +L ++EEEEK L
Sbjct: 720 IDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALR 779
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEK A+AFGL+ TA +R+ KN+R+C DCH A KLISK+ REI+VRD RFH F
Sbjct: 780 WHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFR 839
Query: 595 EGSCSCKDFW 604
+G CSC D+W
Sbjct: 840 DGLCSCGDYW 849
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 165/332 (49%), Gaps = 18/332 (5%)
Query: 23 NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYL 81
++G P FT P LK+C R D G + H++ K GL D D FV SL+++Y CG +
Sbjct: 60 SDGVAPDRFTLPPALKSC-RGDD---GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRV 115
Query: 82 ADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR---GLKPDSFSIVRVL 138
DA KVF+ + +N+VSW A+++ + + +FR L PD ++V VL
Sbjct: 116 DDAEKVFEGMAGRNLVSWNALMAAVADP---RRGLELFRDCLEDLGGTAAPDEATLVTVL 172
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE---K 195
C L T + +HG ++G V+ LVD+YAKCG M A F + P +
Sbjct: 173 PMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGR 232
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVLSACASLGAL-ELGV 252
++VSW+ M+ GYA NG A + MQ E + + TM+ VL C+ L L +L
Sbjct: 233 NVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRE 292
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNG 312
+ + R L+ ++ LI Y +CG + AC+VF + K WNA++ + NG
Sbjct: 293 LHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNG 352
Query: 313 YVKVAFGVFGQL-EKCGIQPNGNTFVGLLCGC 343
A +F ++ CG +P+ + LL C
Sbjct: 353 EASAAIELFREMTNACGQKPDWFSIGSLLLAC 384
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/534 (38%), Positives = 323/534 (60%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ YV G L A K+FD++P +NV +W A+++G N G EE++ F + G++PD
Sbjct: 6 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ + + C L D+ + + +H YV +G R++ V +SL +Y +CG +
Sbjct: 66 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+P +IVS ++ I G NG + AL+ F M+ ++ T V +++C+ L AL
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + + + T+L+ MY++CG + + +V E D V+ +A++S
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 245
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+G+ + A G+F Q+ G +PN TF+ LL C+H+GL DEG F M++ + L P ++
Sbjct: 246 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVK 305
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
HY C+VDLLGRSG L+EA +LI SMP++P+ ++W LL+ C+ KK D+AE + ++I L
Sbjct: 306 HYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIEL 365
Query: 431 EPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNS 490
+P +S +YVLLSNI + S +W D +K+R M ++ ++K G SWVE+ G +H+F GD S
Sbjct: 366 DPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDES 425
Query: 491 HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTA 550
H +I L+E+ T+++ G+ P V D+E+EEK+ LA HSEKLA+AF ++
Sbjct: 426 HSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLP 485
Query: 551 PKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IR+ KNLRVC DCH AIKL+SK+ GREI+VRD +RFH F +G CSC D+W
Sbjct: 486 EGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G ++ + ++ F+ +MR EG P + + + CA D G + H+ +V++G
Sbjct: 37 MVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSG 96
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D V +SL ++Y+ CG+L D +P N+VS ISG G+ E A+ F
Sbjct: 97 LDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFC 156
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++ ++ + V +T+C+ L L+ + IH + G + V V TSLV +Y++CG
Sbjct: 157 LMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCG 216
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + RV + D+V S+MI Y +G ++A+ +F M +P T + +L
Sbjct: 217 CLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLY 276
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G + G+ M + L V T ++D+ + G + +A + M D
Sbjct: 277 ACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDG 336
Query: 299 VVWNAVVSG 307
V+W ++S
Sbjct: 337 VIWKTLLSA 345
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/534 (38%), Positives = 323/534 (60%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ YV G L A K+FD++P +NV +W A+++G N G EE++ F + G++PD
Sbjct: 114 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 173
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+ + + C L D+ + + +H YV +G R++ V +SL +Y +CG +
Sbjct: 174 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 233
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+P +IVS ++ I G NG + AL+ F M+ ++ T V +++C+ L AL
Sbjct: 234 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 293
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + + + T+L+ MY++CG + + +V E D V+ +A++S
Sbjct: 294 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 353
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+G+ + A G+F Q+ G +PN TF+ LL C+H+GL DEG F M++ + L P ++
Sbjct: 354 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVK 413
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIAL 430
HY C+VDLLGRSG L+EA +LI SMP++P+ ++W LL+ C+ KK D+AE + ++I L
Sbjct: 414 HYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIEL 473
Query: 431 EPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNS 490
+P +S +YVLLSNI + S +W D +K+R M ++ ++K G SWVE+ G +H+F GD S
Sbjct: 474 DPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDES 533
Query: 491 HPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTA 550
H +I L+E+ T+++ G+ P V D+E+EEK+ LA HSEKLA+AF ++
Sbjct: 534 HSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLP 593
Query: 551 PKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IR+ KNLRVC DCH AIKL+SK+ GREI+VRD +RFH F +G CSC D+W
Sbjct: 594 EGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G ++ + ++ F+ +MR EG P + + + CA D G + H+ +V++G
Sbjct: 145 MVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSG 204
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D V +SL ++Y+ CG+L D +P N+VS ISG G+ E A+ F
Sbjct: 205 LDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFC 264
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++ ++ + V +T+C+ L L+ + IH + G + V V TSLV +Y++CG
Sbjct: 265 LMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCG 324
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + RV + D+V S+MI Y +G ++A+ +F M +P T + +L
Sbjct: 325 CLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLY 384
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G + G+ M + L V T ++D+ + G + +A + M D
Sbjct: 385 ACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDG 444
Query: 299 VVWNAVVSG 307
V+W ++S
Sbjct: 445 VIWKTLLSA 453
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 156/322 (48%), Gaps = 11/322 (3%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
D F+ +L A LGD TA+ + + + RNV L+ Y K G++E AR++F
Sbjct: 76 DRFTANHLLLAYADLGDFPTARGLFERIPK----RNVMSWNILIGGYVKNGDLETARKLF 131
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D+MP +++ +W++M+ G ++G +E+L F+ M+RE ++P+ Y + + CA L +
Sbjct: 132 DEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVV 191
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G +++ R+ + +G++L MY +CG + R + + V N +SG +
Sbjct: 192 SGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRT 251
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
NG + A F + G++ N TFV + C+ + +G+Q ++++ + ++
Sbjct: 252 QNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQ-IHALAIKTGVDKVV 310
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+V + R G L ++ + + ++ A+++ H A + Q++A
Sbjct: 311 PVMTSLVHMYSRCGCLGDSERVCLEYS-GTDLVLCSAMISAYGFHGHGQKAVGLFKQMMA 369
Query: 430 --LEPWNSGNYVLLSNIYSASH 449
EP L+ +Y+ SH
Sbjct: 370 AGAEP---NEVTFLTLLYACSH 388
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 320/522 (61%), Gaps = 1/522 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A +F+ + + ++V + ++ GY N E ++F +L G+ PD+++ +L AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L + +H + G NV+V +L+++Y +C +++ AR VFD++ E +V +++M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAM 201
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I GYA P EAL +F MQ + LKP T++ VLS+CA LG+L+LG W + +++ F
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ T LIDM+AKCG + A +F +M+ KD W+A++ + +G + + +F +
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
+ +QP+ TF+GLL C+H G V+EGR++F+ M F + P I+HYG MVDLL +G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAG 381
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
L++A+E I +P+ P ++W LLA C H DLAE V ++ L+ + G+YV+LSN
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 444 IYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDE 503
+Y+ + KW +R +M D+ K+ GCS +EV+ VVHEF GD + K++ LDE
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 501
Query: 504 LATKLKAAGFVPTTDHVLF-DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
+ +LK +G+VP T V+ ++ ++EK+ L HSEKLA+ FGL+ T P IR+ KNLR
Sbjct: 502 MVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLR 561
Query: 563 VCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
VC DCH A KLIS I GR+++ RD RFH F +G CSC DFW
Sbjct: 562 VCRDCHNAAKLISLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 184/322 (57%), Gaps = 8/322 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYN---SMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIV 57
M RG+ F + +E ++ + +G LP N+TFP +LKACA + G + H L +
Sbjct: 100 MARGYSR---FTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSM 156
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
K GLD + +V +L+N+Y C + A VFD I + VV + A+I+GY EA++
Sbjct: 157 KLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALS 216
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+FR + + LKP+ +++ VL++C LG L KWIH Y + + V V T+L+D++A
Sbjct: 217 LFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFA 276
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCG+++ A +F++M KD +WS+MI YA++G ++++ MF M+ EN++P+ T +G
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 238 VLSACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-D 295
+L+AC+ G +E G + S + + + + +++D+ + G + A + ++
Sbjct: 337 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPIS 396
Query: 296 KDQVVWNAVVSGLSMNGYVKVA 317
++W +++ S + + +A
Sbjct: 397 PTPMLWRILLAACSSHNNLDLA 418
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+M AR +F+ M E DIV ++SM +GY+ P E +F + + + P+ YT +L
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACA ALE G + N + TLI+MY +C + A VF + + V
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVV 196
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+NA+++G + A +F +++ ++PN T + +L C G +D G+ + +
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK-WIHKY 255
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
++ S ++ ++D+ + G LD+A + + M + + W A++ H K +
Sbjct: 256 AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAE 313
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/586 (37%), Positives = 337/586 (57%), Gaps = 34/586 (5%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYV---HCGYLADALKVFDDIPDKNVVSWTAIISGYINE 109
H+ I + L +V T+LL H +F + N ++A+I Y
Sbjct: 31 HAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSALIRAYARN 90
Query: 110 GNLEEAINMFRRLLHRGLKPDSFS---IVRVLTACTQLGDLSTAKWIHGYVNEAGKG--- 163
G +I ++ +L+ + P SF+ + +L + L ++ G+VN+ G
Sbjct: 91 GPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSLGSQLHLHAFLFGFVNDLYVGNTI 150
Query: 164 ----------------------RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
R+V T L+ YA+ G+M+ A +F +P KD+V+W+
Sbjct: 151 IHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAWT 210
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
SM+ GY+ N PK+AL F M+ + + T+VG +SACA LG W E +
Sbjct: 211 SMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESS 270
Query: 262 EFLS--NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
F S N +G+ LIDMY+KCG + +A VF+ MK+ + +++++ G +++G + A
Sbjct: 271 RFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIK 330
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F ++ + GI+PN TFVGL C+HAG+V++G+Q F +M + ++P +HY CM DLL
Sbjct: 331 LFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLL 390
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
GR+G L++A +L+++MPMEPN VWGALL +H D+AE L LEP N GNY+
Sbjct: 391 GRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNYL 450
Query: 440 LLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV-DGVVHEFLVGDNSHPLSEKIY 498
LLS Y+ + KW+D +++R +M +K ++K GCSWVE +G++HEF GD HP +I
Sbjct: 451 LLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIK 510
Query: 499 SKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIA 558
LD+L +LK G+ P + V +DI++E K+ L HSEKLALA+GL++T I+I
Sbjct: 511 KALDDLLQRLKCTGYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAYGLLSTDAGSTIKIM 570
Query: 559 KNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLR+C DCH + SK+TGR+IIVRDN RFH F+ G+CSC +FW
Sbjct: 571 KNLRICEDCHIVMCGASKLTGRKIIVRDNMRFHHFLNGACSCNNFW 616
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 173/353 (49%), Gaps = 40/353 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + N F H+I Y SM N P +FTF + LG + H G
Sbjct: 83 LIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNP---SLGSQLHLHAFLFG 139
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE------- 113
D +V +++++YV G L A KVFD++P ++VV+WT +I Y G+++
Sbjct: 140 FVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFV 199
Query: 114 ------------------------EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+A+ FR++ G+ D ++V ++AC QLG
Sbjct: 200 GLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGY 259
Query: 150 AKWIHGYVNEA--GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
A WI + G G NVFV ++L+D+Y+KCGN+E+A VF M E ++ S+SSMI G+
Sbjct: 260 ADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGF 319
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A +G + A+ +FY M +KP + T VG+ +AC+ G +E G M+ +S P
Sbjct: 320 AVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVS-P 378
Query: 268 VLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
+ D+ + G + +A ++ + M + + VW A++ ++G VA
Sbjct: 379 TADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVA 431
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/606 (37%), Positives = 343/606 (56%), Gaps = 5/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ ND + + MR P T V+ AC D +LG H ++K G
Sbjct: 267 MISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTG 326
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V SL+ ++ G +A VF + K++VSWTA+ISGY G E+A+ +
Sbjct: 327 FVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYT 386
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ H G+ PD +I VL+AC LG L +H + + G V VA SL+D+Y+KC
Sbjct: 387 IMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCR 446
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++KA VF ++P K+++SW+S+I G N EAL F+ +LKP T+V VLS
Sbjct: 447 CIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEAL-FFFQQMILSLKPNSVTLVSVLS 505
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA +GAL G + R + L L+DMY +CGRM A F +KD
Sbjct: 506 ACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVAS 564
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++G + G +A +F ++ + + P+ TF LLC C+ +G+V +G ++F SM
Sbjct: 565 WNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESME 624
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
F + P ++HY +VDLLGR+G+L++A+E IK MP++P+ +WGALL CR+++ +L
Sbjct: 625 HKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELG 684
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + ++ + G Y+LL N+Y+ S KW++ A++R +M + + GCSWVEV G
Sbjct: 685 ELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQ 744
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL GD+ HP ++I + L+ K++A G + D DI+ + + F HSE+L
Sbjct: 745 VHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDASKAEIFCG-HSERL 803
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI T P I + KNL +C +CH +K ISK+ R I VRD +FH F +G CSC
Sbjct: 804 AIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSC 863
Query: 601 KD--FW 604
D +W
Sbjct: 864 GDEGYW 869
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 219/429 (51%), Gaps = 6/429 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ F A+ Y+ M G P +TFP VL+ C D G H +++ G
Sbjct: 166 LVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYG 225
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D V +L+ +YV CG + A VFD +P ++ +SW A+ISGY E + +F
Sbjct: 226 FESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFF 285
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + PD ++ V++AC LGD + +HGYV + G V V SL+ +++ G
Sbjct: 286 MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVG 345
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++A VF +M KD+VSW++MI GY NG P++A++ + M+ E + P+ T+ VLS
Sbjct: 346 CWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLS 405
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LG L+ G+ F +R S ++ +LIDMY+KC + +A +VF + +K+ +
Sbjct: 406 ACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVIS 465
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++ GL +N A F Q+ ++PN T V +L C G + G++
Sbjct: 466 WTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHAL 524
Query: 361 RV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R + + ++D+ R G+++ A S E + W LL G K L
Sbjct: 525 RTGLGFDGFLPN--ALLDMYVRCGRMEPAWNQFNS--CEKDVASWNILLTGYAQQGKGGL 580
Query: 420 AEHVLNQLI 428
A + +++I
Sbjct: 581 AVELFHKMI 589
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 219/417 (52%), Gaps = 7/417 (1%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ +L+ C + G R HS + K + +LL+++V G L +A VF +
Sbjct: 96 TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
++++ SW ++ GY G +EA+N++ R+L G++PD ++ VL C L DL+ +
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+H +V G +V V +L+ +Y KCG++ AR VFD+MP +D +SW++MI GY N
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND 275
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
E L +F+ M+ + P+ TM V+SAC +LG LG ++ + F++ +
Sbjct: 276 VCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN 335
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
+LI M++ G +A VF +M+ KD V W A++SG NG + A + +E G+ P
Sbjct: 336 SLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVP 395
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ T +L C GL+D+G R LT + ++D+ + +D+A E+
Sbjct: 396 DEITIASVLSACAGLGLLDKGIMLHEFADRT-GLTSYVIVANSLIDMYSKCRCIDKALEV 454
Query: 392 IKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI-ALEPWNSGNYVLLSNIYSA 447
+P N I W +++ G RL+ ++ A Q+I +L+P N V L ++ SA
Sbjct: 455 FHRIP-NKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKP----NSVTLVSVLSA 506
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 148/323 (45%), Gaps = 5/323 (1%)
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
+G+LE+A+ + + + + + +L C S +H YV++ V +
Sbjct: 72 KGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRL 131
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
+L+ ++ + G++ +A VF +M E+D+ SW+ ++ GYA G+ EAL++++ M +
Sbjct: 132 GNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGI 191
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+P+ YT VL C L L G + R F S+ + LI MY KCG + A
Sbjct: 192 RPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARL 251
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF M +D++ WNA++SG N +F + + + P+ T ++ C G
Sbjct: 252 VFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGD 311
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
GR+ + + + ++ + G DEA + M + + + W A++
Sbjct: 312 ERLGREVHGYVIKT-GFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK-DLVSWTAMI 369
Query: 409 AGCRLHKKTDLAEHVLNQLIALE 431
+G ++K L E + +E
Sbjct: 370 SG---YEKNGLPEKAVETYTIME 389
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 2/210 (0%)
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+S+I G ++AL +MQ + E T + +L C A G S++ +
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
LG L+ M+ + G + +A VF +M ++D WN +V G + GY A +
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
+ ++ GI+P+ TF +L C + GR+ + R + ++ ++ +
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIR-YGFESDVDVVNALITMYV 241
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ G + A + MP + I W A+++G
Sbjct: 242 KCGDIFSARLVFDRMPRR-DRISWNAMISG 270
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/542 (39%), Positives = 322/542 (59%), Gaps = 1/542 (0%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
+E V + + Y CG L+ A +VF I K V SW A+I GY + +++ + ++
Sbjct: 427 NELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMK 486
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
GL PD F++ +L+AC+Q+ L K +HG + R+ FV SL+ LY CG +
Sbjct: 487 SSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELS 546
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
A +FD M +K +VSW++M+ GY NGFP+ AL +F M ++P +M+ V AC+
Sbjct: 547 TAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACS 606
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
L +L LG A + + N + ++IDMYAK G + ++ KVF +K++ WNA
Sbjct: 607 LLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNA 666
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+V G ++G K A +F ++++ G P+ TF+G+L C H+GLV EG + + M +F
Sbjct: 667 MVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLF 726
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHEL-IKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ P ++HY C++D+L R+G+LDEA ++ + M EP +W LL+ CR+HK ++ E
Sbjct: 727 GMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEK 786
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
+ +L EP NYVLLSN+Y+ S KW++ K+R M + ++K GCSW+E++G V
Sbjct: 787 IAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVF 846
Query: 483 EFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLAL 542
F+ G++S E+I S L ++ G+ P T V D+ EEEK L HSEKLA+
Sbjct: 847 SFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAI 906
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
+GLI T+ +R+ KNLR+C DCH A KLISK+ REI+VRDN RFH F G CSC D
Sbjct: 907 TYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGD 966
Query: 603 FW 604
+W
Sbjct: 967 YW 968
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 182/310 (58%), Gaps = 5/310 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + + +++ Y M++ G LP FT +L AC++ +LG H LI++
Sbjct: 465 LIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNR 524
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV SLL+LY+HCG L+ A +FD + DK +VSW +++GY+ G E A+++FR
Sbjct: 525 LERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFR 584
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ G++P S++ V AC+ L L + HGY + N F+A S++D+YAK G
Sbjct: 585 QMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNG 644
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ ++ +VF+ + E+ + SW++M+ GY +G KEA+ +F MQR P+ T +GVL+
Sbjct: 645 SVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLT 704
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKV-FREMKDKD 297
AC G + G+ M + F NP L +IDM + G++ +A K+ EM ++
Sbjct: 705 ACNHSGLVHEGLTYLDQM-KTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEP 763
Query: 298 QV-VWNAVVS 306
V +WN ++S
Sbjct: 764 GVGIWNFLLS 773
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 212/423 (50%), Gaps = 20/423 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I + N+ + + +E + M E G LP NFTFP V+KACA + Q+G+ H L+VK
Sbjct: 154 VISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKT 213
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L D FV +L++ Y G ++DAL+VF +P++N+VSW ++I + + G EE +
Sbjct: 214 RLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLL 273
Query: 120 RRLLHR----GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+++ + PD ++ VL C + ++ K +HG + + V V +L+D+
Sbjct: 274 GQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDM 333
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR--ENLKPEYY 233
Y+KCG + A+ +F K++VSW++M+ G+++ G + D+ M +L+ +
Sbjct: 334 YSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEV 393
Query: 234 TMVGVLSAC------ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
T++ + C +L L F+ NE ++N + + YAKCG ++ A
Sbjct: 394 TILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVAS-----YAKCGSLSYAH 448
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
+VF ++ K WNA++ G S + +++ + Q++ G+ P+ T LL C+
Sbjct: 449 RVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIK 508
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGAL 407
+ G++ + R L Y ++ L G+L AH L +M + + W +
Sbjct: 509 SLKLGKEVHGLIIR-NRLERDSFVYISLLSLYIHCGELSTAHVLFDAME-DKTLVSWNTM 566
Query: 408 LAG 410
+ G
Sbjct: 567 VNG 569
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 148/293 (50%), Gaps = 6/293 (2%)
Query: 38 KACAREHDFQLGVRSHSLIVK-AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
+A R D QLG + H L+ + A L D+ + T ++ +Y CG D+ VFD + KN+
Sbjct: 89 QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNL 148
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLL-HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
W A+IS Y + MF +++ GL PD+F+ V+ AC + ++ +HG
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHG 208
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
V + +VFV+ +LV Y G++ A RVF MPE+++VSW+SMI+ ++ NG +E
Sbjct: 209 LVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEE 268
Query: 216 ALDMFYNMQREN----LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
+ M ++ P+ T+ VL CA + +G + V+
Sbjct: 269 CFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNN 328
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
L+DMY+KCG + A +F+ +K+ V WN +V G S G + F + Q+
Sbjct: 329 ALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQM 381
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 141/289 (48%), Gaps = 12/289 (4%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFV-ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
D+ + IH V+E+ + N V T ++ +Y+ CG+ + +R VFD + +K++ W+++I
Sbjct: 96 DIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVI 155
Query: 205 QGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
Y+ N L+MF M E+ L P+ +T V+ ACA + +++G+ + +
Sbjct: 156 SSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRL 215
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ + + L+ Y G ++ A +VF+ M +++ V WN+++ S NG + F + GQ
Sbjct: 216 VEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQ 275
Query: 324 L----EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+ ++ P+ T +L C + G+ + ++ SL + ++D+
Sbjct: 276 MMEKDDEIAFTPDVATLATVLPVCARDREIGVGKG-VHGLAMKLSLDKEVVVNNALMDMY 334
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR----LHKKTDLAEHVL 424
+ G +++A + K + N + W ++ G +HK DL +L
Sbjct: 335 SKCGCINDAQVIFK-LNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQML 382
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/602 (37%), Positives = 341/602 (56%), Gaps = 3/602 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ ND + + MR P T V+ AC D +LG H ++K G
Sbjct: 267 MISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTG 326
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V SL+ ++ G +A VF + K++VSWTA+ISGY G E+A+ +
Sbjct: 327 FVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYT 386
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ H G+ PD +I VL+AC LG L +H + + G V VA SL+D+Y+KC
Sbjct: 387 IMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCR 446
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++KA VF ++P K+++SW+S+I G N EAL F+ +LKP T+V VLS
Sbjct: 447 CIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEAL-FFFQQMILSLKPNSVTLVSVLS 505
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA +GAL G + R + L L+DMY +CGRM A F +KD
Sbjct: 506 ACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVAS 564
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++G + G +A +F ++ + + P+ TF LLC C+ +G+V +G ++F SM
Sbjct: 565 WNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESME 624
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
F + P ++HY +VDLLGR+G+L++A+E IK MP++P+ +WGALL CR+++ +L
Sbjct: 625 HKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELG 684
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + ++ + G Y+LL N+Y+ S KW++ A++R +M + + GCSWVEV G
Sbjct: 685 ELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQ 744
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL GD+ HP ++I + L+ K++A G + D DI+ + + F HSE+L
Sbjct: 745 VHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDASKAEIFCG-HSERL 803
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI T P I + KNL +C +CH +K ISK+ R I VRD +FH F +G CSC
Sbjct: 804 AIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSC 863
Query: 601 KD 602
D
Sbjct: 864 GD 865
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 219/429 (51%), Gaps = 6/429 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ F A+ Y+ M G P +TFP VL+ C D G H +++ G
Sbjct: 166 LVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYG 225
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D V +L+ +YV CG + A VFD +P ++ +SW A+ISGY E + +F
Sbjct: 226 FESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFF 285
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + PD ++ V++AC LGD + +HGYV + G V V SL+ +++ G
Sbjct: 286 MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVG 345
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++A VF +M KD+VSW++MI GY NG P++A++ + M+ E + P+ T+ VLS
Sbjct: 346 CWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLS 405
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LG L+ G+ F +R S ++ +LIDMY+KC + +A +VF + +K+ +
Sbjct: 406 ACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVIS 465
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++ GL +N A F Q+ ++PN T V +L C G + G++
Sbjct: 466 WTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHAL 524
Query: 361 RV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R + + ++D+ R G+++ A S E + W LL G K L
Sbjct: 525 RTGLGFDGFLPN--ALLDMYVRCGRMEPAWNQFNS--CEKDVASWNILLTGYAQQGKGGL 580
Query: 420 AEHVLNQLI 428
A + +++I
Sbjct: 581 AVELFHKMI 589
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 219/417 (52%), Gaps = 7/417 (1%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T+ +L+ C + G R HS + K + +LL+++V G L +A VF +
Sbjct: 96 TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
++++ SW ++ GY G +EA+N++ R+L G++PD ++ VL C L DL+ +
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+H +V G +V V +L+ +Y KCG++ AR VFD+MP +D +SW++MI GY N
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND 275
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
E L +F+ M+ + P+ TM V+SAC +LG LG ++ + F++ +
Sbjct: 276 VCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN 335
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
+LI M++ G +A VF +M+ KD V W A++SG NG + A + +E G+ P
Sbjct: 336 SLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVP 395
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ T +L C GL+D+G R LT + ++D+ + +D+A E+
Sbjct: 396 DEITIASVLSACAGLGLLDKGIMLHEFADRT-GLTSYVIVANSLIDMYSKCRCIDKALEV 454
Query: 392 IKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI-ALEPWNSGNYVLLSNIYSA 447
+P N I W +++ G RL+ ++ A Q+I +L+P N V L ++ SA
Sbjct: 455 FHRIP-NKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKP----NSVTLVSVLSA 506
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 148/323 (45%), Gaps = 5/323 (1%)
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
+G+LE+A+ + + + + + +L C S +H YV++ V +
Sbjct: 72 KGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRL 131
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
+L+ ++ + G++ +A VF +M E+D+ SW+ ++ GYA G+ EAL++++ M +
Sbjct: 132 GNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGI 191
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+P+ YT VL C L L G + R F S+ + LI MY KCG + A
Sbjct: 192 RPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARL 251
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF M +D++ WNA++SG N +F + + + P+ T ++ C G
Sbjct: 252 VFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGD 311
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
GR+ + + + ++ + G DEA + M + + + W A++
Sbjct: 312 ERLGREVHGYVIKT-GFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK-DLVSWTAMI 369
Query: 409 AGCRLHKKTDLAEHVLNQLIALE 431
+G ++K L E + +E
Sbjct: 370 SG---YEKNGLPEKAVETYTIME 389
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 2/210 (0%)
Query: 201 SSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
+S+I G ++AL +MQ + E T + +L C A G S++ +
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
LG L+ M+ + G + +A VF +M ++D WN +V G + GY A +
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
+ ++ GI+P+ TF +L C + GR+ + R + ++ ++ +
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIR-YGFESDVDVVNALITMYV 241
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ G + A + MP + I W A+++G
Sbjct: 242 KCGDIFSARLVFDRMPRR-DRISWNAMISG 270
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/509 (40%), Positives = 328/509 (64%), Gaps = 4/509 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ D + A Y + +GFLP FTFP VLK+CA+ G + H +I+K G
Sbjct: 5 LVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVIIKMG 64
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
C+ +V+ SL++ Y C DA +VFD++ ++VVSWT +ISGY+ G +EA+ +F
Sbjct: 65 FVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFL 124
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ ++P++ + V VL AC + G LS K IHG ++ G + V+ +L+D+Y KCG
Sbjct: 125 RM---DVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCG 181
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ A++VFD++ EKDIVSW+S+I G PKEAL++F +MQ ++P+ + VLS
Sbjct: 182 CLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLS 241
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LGAL+ G W ++R + +GT ++DMYAKCG + + ++F M K+ +
Sbjct: 242 ACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLT 301
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA+++GL+M+G+ +F ++ + G++PN TF+ +L C H GLV+EGRQ+FN M
Sbjct: 302 WNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMK 361
Query: 361 -RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ ++L P +EHYGCMVDLL R+ LDEA EL K+MPM P+ + GALL+ C+ + T+L
Sbjct: 362 GQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTEL 421
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ +L++ + L+ +SG YVLLSNI++ + +W+D +IR +M +KGI+K G + +E+DG
Sbjct: 422 PQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVIELDG 481
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKL 508
HEF+VGD HP ++I L L+ ++
Sbjct: 482 KAHEFIVGDTRHPQDKRIRLLLKILSDQI 510
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 161/316 (50%), Gaps = 5/316 (1%)
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
+ A++SGY + A ++RR++ G PD F+ VL +C + + + +HG +
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 159 EAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALD 218
+ G N++V SLV Y+ C A RVFD+M +D+VSW+ +I GY G EA+
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
+F M +++P T V VL AC G L +G ++ F + L+DMY
Sbjct: 122 LFLRM---DVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYV 178
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
KCG + A +VF E+ +KD V W +++SGL K A +F ++ GI+P+G
Sbjct: 179 KCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTS 238
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
+L C G +D GR + R ++ I+ MVD+ + G ++ + ++ MP +
Sbjct: 239 VLSACARLGALDYGRWVHEHIDRK-AIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK 297
Query: 399 PNAIVWGALLAGCRLH 414
N + W ALL G +H
Sbjct: 298 -NVLTWNALLNGLAMH 312
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/604 (36%), Positives = 345/604 (57%), Gaps = 19/604 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + NDC ++A S + +CAR+ G+ H +K
Sbjct: 234 MVSCYSENDCPENAFRCAQSC------------SLLAISCARQ-----GI--HGCAIKTL 274
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V +LL++Y CG + DA F+ IP +V+ + +IS Y E+A +F
Sbjct: 275 NDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFL 334
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
RL+ + P+ +S+ VL ACT + L K IH + + G ++FV +L+D YAKC
Sbjct: 335 RLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN 394
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+M+ + ++F + + + VSW++++ G++ +G +EAL +F MQ + T VL
Sbjct: 395 DMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLR 454
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACAS ++ +E++ F ++ V+G +LID YAKCG + A KVF+ + ++D +
Sbjct: 455 ACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIIS 514
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++SG +++G A +F ++ K ++ N TFV LL C GLV+ G F+SM
Sbjct: 515 WNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMR 574
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P +EHY C+V LLGR+G+L++A + I +P P+A+VW ALL+ C +HK L
Sbjct: 575 IDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALG 634
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+++ +EP + YVLLSN+Y+A+ + A +R M + G++K+ G SWVE+ G
Sbjct: 635 RFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGE 694
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H F VG HP I + L+ L K G++P + VL D+++E+K L HSE+L
Sbjct: 695 IHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERL 754
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
ALA+GL+ T P IRI KNLR C DCH A +ISKI REIIVRD NRFH F +G CSC
Sbjct: 755 ALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSC 814
Query: 601 KDFW 604
D+W
Sbjct: 815 GDYW 818
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 198/418 (47%), Gaps = 23/418 (5%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
F+ A + +R EG F +LK L HS K G D + FV +
Sbjct: 143 FEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSG 202
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++ Y C ++DA VF+ I K+ V WTA++S Y +E + E N F
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCY-SENDCPE--NAF----------- 248
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
R +C+ L + IHG + V +L+D+YAKCG+++ AR F+
Sbjct: 249 -----RCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFE 303
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+P D++ S MI YA + ++A ++F + R ++ P Y++ VL AC ++ L+
Sbjct: 304 MIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDF 363
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + + S+ +G L+D YAKC M + K+F ++D ++V WN +V G S
Sbjct: 364 GKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQ 423
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-VFSLTPMI 369
+G + A VF +++ + T+ +L C + Q S+ + F+ +I
Sbjct: 424 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 483
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ ++D + G + +A ++ + + ME + I W A+++G LH + A + +++
Sbjct: 484 GN--SLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALHGQAADALELFDRM 538
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 190/416 (45%), Gaps = 32/416 (7%)
Query: 3 RGFVSNDCFQHAIEFY-NSMRNEGFLPT-----NFTFPFVLKACAREHDFQLGVRSHSLI 56
RGF + + A+++ + + + LP+ +F L+ C D + G H +
Sbjct: 29 RGFAA---YAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHV 85
Query: 57 VKAGL--DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEE 114
V+ G D F LLN+Y G LA A ++FD +P++N+VS+ ++ + G+ E
Sbjct: 86 VRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEA 145
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A +FRRL G + + F + +L + A +H + G N FV + L+D
Sbjct: 146 AAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLID 205
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
Y+ C + A VF+ + KD V W++M+ Y+ N P+ A F Q +L
Sbjct: 206 AYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA---FRCAQSCSL------ 256
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+ +CA G+ + N+ + P +G L+DMYAKCG + A F +
Sbjct: 257 ---LAISCA-----RQGIHGCAIKTLND--TEPHVGGALLDMYAKCGDIKDARLAFEMIP 306
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
D ++ + ++S + + + AF +F +L + + PN + +L CT+ +D G+Q
Sbjct: 307 YDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQ 366
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
N ++ + + M D + +D + ++ S+ + N + W ++ G
Sbjct: 367 IHNHAIKIGHESDLFVGNALM-DFYAKCNDMDSSLKIFSSL-RDANEVSWNTIVVG 420
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 148/328 (45%), Gaps = 38/328 (11%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGY-VNEAGKGR-NVFVATSLVDLYAKCGNMEKARR 187
DSF+ R L C GD + +HG+ V G GR ++F A L+++Y K G + ARR
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
+FD+MPE+++VS+ +++Q +A G + A +F ++ E + + + +L ++ A
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
L S + N +G+ LID Y+ C ++ A VF + KD VVW A+VS
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237
Query: 308 LSMNGYVKVAF----------------GVFGQLEKCGIQPNGNT--FVG--LLCGCTHAG 347
S N + AF G+ G C I+ +T VG LL G
Sbjct: 238 YSENDCPENAFRCAQSCSLLAISCARQGIHG----CAIKTLNDTEPHVGGALLDMYAKCG 293
Query: 348 LVDEGRQFFNSM--SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM---PMEPNAI 402
+ + R F + V L+ MI Y +S Q ++A EL + + PN
Sbjct: 294 DIKDARLAFEMIPYDDVILLSFMISRY-------AQSNQNEQAFELFLRLMRSSVLPNEY 346
Query: 403 VWGALLAGCRLHKKTDLAEHVLNQLIAL 430
++L C + D + + N I +
Sbjct: 347 SLSSVLQACTNMVQLDFGKQIHNHAIKI 374
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/606 (37%), Positives = 349/606 (57%), Gaps = 42/606 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++RG+ +D +++ + M +GF+ P +F+F FV+KA A + G + H +K
Sbjct: 243 LVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKH 302
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD FV T+L+ +Y CG + A KVFD++P N+V+W A+++ ++ A +F
Sbjct: 303 GLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREIF 362
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++L R + W NV +A Y K
Sbjct: 363 DKMLVR----------------------NHTSW------------NVMLAG-----YIKA 383
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E A+R+F +MP +D VSWS+MI G++ NG E+ F + R ++P ++ GVL
Sbjct: 384 GELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVL 443
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SAC+ GA E G F+E++ + + LIDMY++CG + A VF M++K +
Sbjct: 444 SACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSI 503
Query: 300 V-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W ++++GL+M+G+ + A +F ++ + G+ P+ +F+ LL C+HAGL+ EG +F+
Sbjct: 504 VSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSK 563
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M RV+ + P +EHYGCMVDL GRSG+L +A+ I MP+ P AIVW LL C H +
Sbjct: 564 MKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIE 623
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
LAE V +L L+P NSG+ VLLSN+Y+ + KW D A IR M + I+KI S VEV
Sbjct: 624 LAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIKKITAWSLVEVG 683
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEEKQYFLACHS 537
+++F + + + + KL E+ +L+ AG+ P L+D+EEEEK+ ++ HS
Sbjct: 684 KTMYKFTACEKKKEIDIEAHEKLKEIILRLRDEAGYAPEVASALYDVEEEEKEDQVSKHS 743
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EKLALAF L IRI KNLR+C DCH +KL S++ G EI++RD NRFH F +GS
Sbjct: 744 EKLALAFALARLPKGANIRIVKNLRICRDCHAVMKLTSRVYGVEIVIRDRNRFHSFKDGS 803
Query: 598 CSCKDF 603
CSC D+
Sbjct: 804 CSCGDY 809
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 148/362 (40%), Gaps = 69/362 (19%)
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD--LYAKCGNMEKARRV 188
++ I R C L L+ IHG+ ++G + + L+ + + ARR+
Sbjct: 172 AWKITRKDQYCKNLRALTQ---IHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRL 228
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGA 247
PE D ++++++GY+ + P ++ +F M R+ + P+ ++ V+ A A+ +
Sbjct: 229 LLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRS 288
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
L G ++ S+ + TTLI MY +CG + A KVF EM + V WNAVV+
Sbjct: 289 LRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTA 348
Query: 308 --------------------------LSMNGYVKV------------------------- 316
+ + GY+K
Sbjct: 349 CFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMI 408
Query: 317 -----------AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
+F F +L + ++PN + G+L C+ +G + G+ + +
Sbjct: 409 VGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKS-GY 467
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
+ ++ ++D+ R G + A + + M + + + W +++AG +H + A + N
Sbjct: 468 SWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFN 527
Query: 426 QL 427
++
Sbjct: 528 EM 529
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/637 (34%), Positives = 358/637 (56%), Gaps = 51/637 (8%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
+ M+ +G P +T VLK C+RE++ Q G H+ I++ G+ D ++ S+L+LY+
Sbjct: 121 LFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYL 180
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL--------- 127
C A F+ + +K+VVSW +I Y+ EG++E+++ MFR ++ +
Sbjct: 181 KCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDG 240
Query: 128 ------------------------KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG 163
P +FSI +L + L + + +HG V G
Sbjct: 241 LIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSL--VEVGRQLHGRVLTFGLN 298
Query: 164 RNVFVATSLVDLYAKCGNMEKARRVFDQMP----------------EKDIVSWSSMIQGY 207
+ ++ +SLV++Y KCG M+KA + +P + +VSWSSM+ GY
Sbjct: 299 SDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGY 358
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
NG ++ + F +M E + + T+ ++SACA+ G LE G +++++ +
Sbjct: 359 VWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDA 418
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+G++LIDMY+K G + A +F ++K+ + V+W +++SG +++G K A +F +
Sbjct: 419 YVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNL 478
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GI PN TFVG+L C+H GL++EG ++F M + + P +EHY MV+L GR+G L E
Sbjct: 479 GIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIE 538
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A I + VW + L+ CRLHK ++ + V L+ P + Y+LLSN+ S+
Sbjct: 539 AKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSS 598
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+H+W++AA +RS+M +G++K G SWV++ +H F VGD SHP ++IYS LD L +
Sbjct: 599 NHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGR 658
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
LK G+ V+ D+EEE+ + ++ HSEKLAL F +I T+P+ IRI KNLR+C DC
Sbjct: 659 LKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNLRICNDC 718
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H K S++ REIIVRD +RFH F + SCSC ++W
Sbjct: 719 HNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 186/394 (47%), Gaps = 54/394 (13%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINE-GNLEEAINMFRRLLHRGLKP 129
LL LYV L A K+FD+I KN +WT +ISG+ G+ E ++FR + G P
Sbjct: 73 LLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACP 132
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
+ +++ VL C++ ++ K IH ++ G G +V + S++DLY KC E A F
Sbjct: 133 NQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFF 192
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP------------------- 230
+ M EKD+VSW+ MI Y G +++L+MF N +++
Sbjct: 193 ELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALE 252
Query: 231 EYYTMVG------------VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
+ Y MV L +SL +E+G + S+ + ++L++MY
Sbjct: 253 QLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYG 312
Query: 279 KCGRMAQACKVFREM----------------KDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
KCGRM +A + +++ V W+++VSG NG + F
Sbjct: 313 KCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFR 372
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY--GCMVDLLG 380
+ I + T ++ C +AG+++ G+Q + ++ I+ Y ++D+
Sbjct: 373 SMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKI---GLRIDAYVGSSLIDMYS 429
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+SG LD+A + + + EPN ++W ++++GC LH
Sbjct: 430 KSGSLDDALMIFEQIK-EPNVVLWTSMISGCALH 462
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 146/335 (43%), Gaps = 57/335 (17%)
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
R +P SF L + T +G + + +HG+ + G + + A L+ LY K N++
Sbjct: 31 RSRQPCSF-----LHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDH 85
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYA-SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
A ++FD++ K+ +W+ +I G+A + G + +F MQ + P YT+ VL C+
Sbjct: 86 AHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCS 145
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV--- 300
++ G +++ RN + VL +++D+Y KC A F M +KD V
Sbjct: 146 RENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNI 205
Query: 301 ----------------------------WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
WN ++ GL GY ++A + G + +
Sbjct: 206 MIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFS 265
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY--GCMVDLLGRSGQLDEAHE 390
TF L + LV+ GRQ RV + + Y +V++ G+ G++D+A
Sbjct: 266 PVTFSIALILVSSLSLVEVGRQLHG---RVLTFGLNSDGYIRSSLVEMYGKCGRMDKAST 322
Query: 391 LIKSMPM-------------EPNA--IVWGALLAG 410
++K +P+ EP A + W ++++G
Sbjct: 323 ILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSG 357
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G+V N ++ ++ + SM E + T ++ ACA + G + H+ I K G
Sbjct: 354 MVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIG 413
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L D +V +SL+++Y G L DAL +F+ I + NVV WT++ISG G +EAI++F
Sbjct: 414 LRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFE 473
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+L+ G+ P+ + V VL AC+ +G + ++ + V TS+V+LY +
Sbjct: 474 GMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRA 533
Query: 180 GNMEKARR-VFDQMPEKDIVSWSSMI 204
G++ +A+ +F+ W S +
Sbjct: 534 GHLIEAKNFIFENSISHFTSVWRSFL 559
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/517 (43%), Positives = 322/517 (62%), Gaps = 4/517 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ S AI Y GF+P +TFP VLK+CA+ + HS+ VK G
Sbjct: 80 LISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQFHSVSVKTG 139
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L CD +V+ +L+++Y CG A KVF+D+ ++VVSWT +ISGY+ G EAI++F
Sbjct: 140 LWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEAISLFL 199
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ ++P+ + V +L AC +LG L+ K IHG V + G + V +++D+Y KC
Sbjct: 200 RM---NVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVLDMYMKCD 256
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR++FD+MPEKDI+SW+SMI G P+E+LD+F MQ +P+ + VLS
Sbjct: 257 SVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSVLS 316
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASLG L+ G W +++ + + +GTTL+DMYAKCG + A ++F M K+
Sbjct: 317 ACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNIRT 376
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM- 359
WNA + GL++NGY K A F L + G +PN TF+ + C H GLVDEGR++FN M
Sbjct: 377 WNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNGLVDEGRKYFNEMT 436
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
S +++L+P +EHYGCMVDLL R+G + EA ELIK+MPM P+ + GALL+ +
Sbjct: 437 SPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQILGALLSSRNTYGNVGF 496
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ +L L +E +SG YVLLSN+Y+ + KW + +R +M KGI K G S + VDG
Sbjct: 497 TQEMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEVRSVRRLMKQKGISKAPGSSIIRVDG 556
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPT 516
+ HEFLVGDNSHP SE+IY L+ LA ++ G + T
Sbjct: 557 MSHEFLVGDNSHPQSEEIYVLLNILANQIYLEGHINT 593
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/612 (35%), Positives = 355/612 (58%), Gaps = 15/612 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS--HSLIVK 58
++ G+V + + + MR G +F V+K C+ D + + H ++K
Sbjct: 181 LVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIK 240
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY------INEGNL 112
AGLD D F+ ++++++Y G L +A +F + + NVV + +I+G+ I +
Sbjct: 241 AGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVA 300
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
EA+ ++ + RG++P F+ VL AC G L K IHG V + + F+ ++L
Sbjct: 301 SEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSAL 360
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+DLY G ME R F P+ DIV+W++M+ G N ++AL +F+ LKP+
Sbjct: 361 IDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDL 420
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+T+ V++ACASL G F ++ F V+G + + MYA+ G + A + F+E
Sbjct: 421 FTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQE 480
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M+ D V W+AV+S + +G + A F ++ + PN TF+G+L C+H GLVDEG
Sbjct: 481 MESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEG 540
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+++ +M++ + L+P I+H C+VDLLGR+G+L +A I + + ++W +LLA CR
Sbjct: 541 LRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCR 600
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
+H+ + + V N+++ LEP +S +YV+L N+Y + + + A+K R +M +G++K G
Sbjct: 601 IHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGL 660
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF 532
SW+E+ VH F+ GD SHP S IY+KL+E+ ++++ + TTD +I + E Q
Sbjct: 661 SWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEK---LATTDT---EISKRE-QNL 713
Query: 533 LACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
+ CHSEKLA+A G+I IR+ KNLRVC DCH +KLISK REII+RD RFH
Sbjct: 714 MNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHH 773
Query: 593 FIEGSCSCKDFW 604
F +GSCSC D+W
Sbjct: 774 FRDGSCSCADYW 785
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 205/427 (48%), Gaps = 18/427 (4%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
++E R G F++ L AC+R + G H+L + GL FV SL++
Sbjct: 93 SLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVS 152
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG + +A +VFD +++ VSW +++SGY+ G EE + +F + G+ +SF+
Sbjct: 153 MYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFA 212
Query: 134 IVRVLTACTQLGD--LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+ V+ C+ GD + A+ +HG V +AG +VF+ ++++D+YAK G + +A +F
Sbjct: 213 LGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRS 272
Query: 192 MPEKDIVSWSSMIQGYASN------GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+ E ++V +++MI G+ EAL ++ +Q ++P +T VL AC
Sbjct: 273 VQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLA 332
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
G LE G + + F + +G+ LID+Y G M + FR D V W A+V
Sbjct: 333 GYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMV 392
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
SG N + A +F + G++P+ T ++ C + G Q + F+
Sbjct: 393 SGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI-----QCFAT 447
Query: 366 TPMIEHYGCM----VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+ + M V + RSG +D A + M + + W A+++ H A
Sbjct: 448 KSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESH-DVVSWSAVISCHAQHGCARDAL 506
Query: 422 HVLNQLI 428
H ++++
Sbjct: 507 HFFDEMV 513
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 183/365 (50%), Gaps = 17/365 (4%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F++ +LL Y G A ++ D++P +N VS+ +I Y EG ++ R
Sbjct: 44 FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G+ D FS L AC++ G L + +H G VFV+ SLV +Y+KCG M +A
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
RRVFD E+D VSW+S++ GY G +E + +F M+R + + + V+ C+
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223
Query: 246 --GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
G +++ + + S+ L + +IDMYAK G + +A +FR +++ + V++N
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283
Query: 304 VVSGLSMNGYV------KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+++G V A ++ +++ G+QP TF +L C AG ++ G+Q
Sbjct: 284 MIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHG 343
Query: 358 SMSRVFSLTPMIEHY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC---R 412
+V T + + ++DL SG +++ +S P + + + W A+++GC
Sbjct: 344 ---QVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGCVQNE 399
Query: 413 LHKKT 417
LH+K
Sbjct: 400 LHEKA 404
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/554 (40%), Positives = 330/554 (59%), Gaps = 2/554 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+++++ G + T LL V G + A +VFD++ + W + GY+
Sbjct: 31 HAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLP 90
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
E++ +++++ G++PD F+ V+ A +QLGD S +H +V + G G VAT L
Sbjct: 91 FESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATEL 150
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
V +Y K G + A +F+ M KD+V+W++ + G AL+ F M + ++ +
Sbjct: 151 VMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDS 210
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+T+V +LSAC LG+LE+G + E N ++ +DM+ KCG A +F E
Sbjct: 211 FTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEE 270
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
MK ++ V W+ ++ G +MNG + A +F ++ G++PN TF+G+L C+HAGLV+EG
Sbjct: 271 MKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEG 330
Query: 353 RQFFNSM--SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+++F+ M S +L P EHY CMVDLLGRSG L+EA+E IK MP+EP+ +WGALL
Sbjct: 331 KRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGA 390
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
C +H+ L + V + L+ P +VLLSNIY+A+ KW+ K+RS M G +K+
Sbjct: 391 CAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVA 450
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
S VE +G +H F GD SHP S+ IY KLDE+ K++ G+VP T V D+E EEK+
Sbjct: 451 AYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKE 510
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L+ HSEKLA+AFGLI P IR+ KNLR C DCH K +S +T EII+RD NRF
Sbjct: 511 CSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRF 570
Query: 591 HCFIEGSCSCKDFW 604
H F G CSCK+FW
Sbjct: 571 HHFRNGVCSCKEFW 584
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 178/315 (56%), Gaps = 4/315 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+ +G+V N ++ Y MR+ G P FT+PFV+KA ++ DF G H+ +VK G
Sbjct: 80 LFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG 139
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
C V T L+ +Y+ G L+ A +F+ + K++V+W A ++ + GN A+ F
Sbjct: 140 FGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFN 199
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ ++ DSF++V +L+AC QLG L + I+ + N+ V + +D++ KCG
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCG 259
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N E AR +F++M ++++VSWS+MI GYA NG +EAL +F MQ E L+P Y T +GVLS
Sbjct: 260 NTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 319
Query: 241 ACASLGALELGVWASSFM-ERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DK 296
AC+ G + G S M + N+ P ++D+ + G + +A + ++M +
Sbjct: 320 ACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEP 379
Query: 297 DQVVWNAVVSGLSMN 311
D +W A++ +++
Sbjct: 380 DTGIWGALLGACAVH 394
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 135/299 (45%), Gaps = 8/299 (2%)
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
K IH V G + T L++ G+M AR+VFD+M + I W+++ +GY N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
P E+L ++ M+ ++P+ +T V+ A + LG G + + + F ++
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
T L+ MY K G ++ A +F M+ KD V WNA ++ G +A F ++ +Q
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
+ T V +L C G ++ G + ++ +R + I +D+ + G + A
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDR-ARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 391 LIKSMPMEPNAIVWGALLAGCRLH--KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
L + M + N + W ++ G ++ + L Q L P NYV + SA
Sbjct: 267 LFEEMK-QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRP----NYVTFLGVLSA 320
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/606 (37%), Positives = 342/606 (56%), Gaps = 5/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N +E ++ MR P T V AC + +LG H +VK+
Sbjct: 270 MISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSE 329
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + SL+ +Y G L +A VF + K+VVSWTA+I+ ++ +A+ ++
Sbjct: 330 FGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYK 389
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ PD ++V VL+AC +G L +H + G +V V+ SL+D+Y+KC
Sbjct: 390 MMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCK 449
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A VF + K++VSW+S+I G N EAL +F+ +E++KP T++ VLS
Sbjct: 450 CVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL-LFFRQMKESMKPNSVTLISVLS 508
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA +GAL G + R + L ++DMY +CGR A F K KD
Sbjct: 509 ACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTA 567
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++G + G K+A +F ++ + I P+ TF+ LLC C+ +G+V EG ++FN M
Sbjct: 568 WNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMK 627
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++LTP ++HY C+VD+LGR+GQLD+A++ I+ MP+ P+A +WGALL CR+H+ +L
Sbjct: 628 NKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELG 687
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E ++ + + G Y+LL N+Y+ W+ +K+RS+M ++G+ GCSWVE+ G
Sbjct: 688 EIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGK 747
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL GDNSH S++I LD +K+K GF +IE F HSE+
Sbjct: 748 VHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIFCG-HSERQ 806
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI TAP I + KNL +C CH +K IS I REI VRD +H F +G CSC
Sbjct: 807 AIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSC 866
Query: 601 KD--FW 604
D +W
Sbjct: 867 GDEGYW 872
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 224/435 (51%), Gaps = 12/435 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ CF A+ Y+ M P +TFP VLK CA D G H+ +++ G
Sbjct: 169 LVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFG 228
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D V +L+ +YV CG +++A +FD +P ++ +SW A+ISGY G E + +F
Sbjct: 229 FESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFS 288
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + PD ++ V +AC L + + +HGYV ++ G ++ + SL+ +Y+ G
Sbjct: 289 MMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLG 348
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E+A VF +M KD+VSW++MI S+ P +A++ + M+ E + P+ T+V VLS
Sbjct: 349 RLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLS 408
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA +G L+LG+ + +S+ ++ +LIDMY+KC + A +VFR + K+ V
Sbjct: 409 ACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS 468
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++ GL +N A F Q+++ ++PN T + +L C G + G++
Sbjct: 469 WTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHAL 527
Query: 361 RVF----SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
R P ++D+ R G+ A S + A W LL G +
Sbjct: 528 RTGVGFDGFLP-----NAILDMYVRCGRKVPALNQFNSQKKDVTA--WNILLTGYAQQGQ 580
Query: 417 TDLAEHVLNQLIALE 431
LA + ++++ LE
Sbjct: 581 AKLAVELFDKMLELE 595
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 214/402 (53%), Gaps = 19/402 (4%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
+LL+++V G L DA VF + +++V SW ++ GY G +EA+N++ R+L ++P
Sbjct: 137 ALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRP 196
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
+ ++ VL C + D++ K IH +V G +V V +L+ +Y KCG++ AR +F
Sbjct: 197 NVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLF 256
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D+MP++D +SW++MI GY NG E L++F M+ ++ P+ TM V SAC L
Sbjct: 257 DKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNER 316
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
LG ++ ++EF + + +LI MY+ GR+ +A VF M+ KD V W A+++ L
Sbjct: 317 LGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLV 376
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+ A + +E GI P+ T V +L C G +D G + + + T ++
Sbjct: 377 SHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIR----LHEIAIKTGLV 432
Query: 370 EHY---GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
H ++D+ + +D A E+ +++ + N + W +L+ G R++ ++ A Q
Sbjct: 433 SHVIVSNSLIDMYSKCKCVDNALEVFRNISGK-NVVSWTSLILGLRINNRSFEALLFFRQ 491
Query: 427 LI-ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
+ +++P N V L ++ SA A+I ++M K I
Sbjct: 492 MKESMKP----NSVTLISVLSA------CARIGALMRGKEIH 523
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 2/307 (0%)
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
+GNLE+A+ +L ++ + + + +L C ++ V+ + V +
Sbjct: 75 QGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRL 134
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
+L+ ++ + GN+ A VF +M E+D+ SW+ ++ GYA G EAL++++ M +
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+P YT VL CA + + G + + R F S+ +G LI MY KCG ++ A
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+F +M +D++ WNA++SG NG +F + + + P+ T + C
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
GR + + I ++ + G+L+EA + M + + W A++
Sbjct: 315 ERLGRGVHGYVVKS-EFGGDISMNNSLIQMYSSLGRLEEAETVFSRME-SKDVVSWTAMI 372
Query: 409 AGCRLHK 415
A HK
Sbjct: 373 ASLVSHK 379
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/606 (37%), Positives = 342/606 (56%), Gaps = 5/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N +E ++ MR P T V AC + +LG H +VK+
Sbjct: 270 MISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSE 329
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + SL+ +Y G L +A VF + K+VVSWTA+I+ ++ +A+ ++
Sbjct: 330 FGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYK 389
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ PD ++V VL+AC +G L +H + G +V V+ SL+D+Y+KC
Sbjct: 390 MMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCK 449
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A VF + K++VSW+S+I G N EAL +F+ +E++KP T++ VLS
Sbjct: 450 CVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL-LFFRQMKESMKPNSVTLISVLS 508
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA +GAL G + R + L ++DMY +CGR A F K KD
Sbjct: 509 ACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTA 567
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++G + G K+A +F ++ + I P+ TF+ LLC C+ +G+V EG ++FN M
Sbjct: 568 WNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMK 627
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++LTP ++HY C+VD+LGR+GQLD+A++ I+ MP+ P+A +WGALL CR+H+ +L
Sbjct: 628 NKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELG 687
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E ++ + + G Y+LL N+Y+ W+ +K+RS+M ++G+ GCSWVE+ G
Sbjct: 688 EIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGK 747
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL GDNSH S++I LD +K+K GF +IE F HSE+
Sbjct: 748 VHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIFCG-HSERQ 806
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+AFGLI TAP I + KNL +C CH +K IS I REI VRD +H F +G CSC
Sbjct: 807 AIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSC 866
Query: 601 KD--FW 604
D +W
Sbjct: 867 GDEGYW 872
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 224/435 (51%), Gaps = 12/435 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ CF A+ Y+ M P +TFP VLK CA D G H+ +++ G
Sbjct: 169 LVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFG 228
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D V +L+ +YV CG +++A +FD +P ++ +SW A+ISGY G E + +F
Sbjct: 229 FESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFS 288
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + PD ++ V +AC L + + +HGYV ++ G ++ + SL+ +Y+ G
Sbjct: 289 MMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLG 348
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+E+A VF +M KD+VSW++MI S+ P +A++ + M+ E + P+ T+V VLS
Sbjct: 349 RLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLS 408
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA +G L+LG+ + +S+ ++ +LIDMY+KC + A +VFR + K+ V
Sbjct: 409 ACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS 468
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++ GL +N A F Q+++ ++PN T + +L C G + G++
Sbjct: 469 WTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHAL 527
Query: 361 RVF----SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
R P ++D+ R G+ A S + A W LL G +
Sbjct: 528 RTGVGFDGFLP-----NAILDMYVRCGRKVPALNQFNSQKKDVTA--WNILLTGYAQQGQ 580
Query: 417 TDLAEHVLNQLIALE 431
LA + ++++ LE
Sbjct: 581 AKLAVELFDKMLELE 595
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 214/403 (53%), Gaps = 19/403 (4%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+LL+++V G L DA VF + +++V SW ++ GY G +EA+N++ R+L ++
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
P+ ++ VL C + D++ K IH +V G +V V +L+ +Y KCG++ AR +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD+MP++D +SW++MI GY NG E L++F M+ ++ P+ TM V SAC L
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
LG ++ ++EF + + +LI MY+ GR+ +A VF M+ KD V W A+++ L
Sbjct: 316 RLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASL 375
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
+ A + +E GI P+ T V +L C G +D G + + + T +
Sbjct: 376 VSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIR----LHEIAIKTGL 431
Query: 369 IEHY---GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
+ H ++D+ + +D A E+ +++ + N + W +L+ G R++ ++ A
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGK-NVVSWTSLILGLRINNRSFEALLFFR 490
Query: 426 QLI-ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
Q+ +++P N V L ++ SA A+I ++M K I
Sbjct: 491 QMKESMKP----NSVTLISVLSA------CARIGALMRGKEIH 523
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 2/307 (0%)
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
+GNLE+A+ +L ++ + + + +L C ++ V+ + V +
Sbjct: 75 QGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRL 134
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
+L+ ++ + GN+ A VF +M E+D+ SW+ ++ GYA G EAL++++ M +
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+P YT VL CA + + G + + R F S+ +G LI MY KCG ++ A
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+F +M +D++ WNA++SG NG +F + + + P+ T + C
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
GR + + I ++ + G+L+EA + M + + W A++
Sbjct: 315 ERLGRGVHGYVVKS-EFGGDISMNNSLIQMYSSLGRLEEAETVFSRME-SKDVVSWTAMI 372
Query: 409 AGCRLHK 415
A HK
Sbjct: 373 ASLVSHK 379
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/612 (34%), Positives = 351/612 (57%), Gaps = 13/612 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + + A + M +EG P+ T C+ + G H+ ++ G
Sbjct: 297 MLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS---SLRFGRMIHACALEKG 353
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D + +LL++Y CG +A +F+ IP N VSW +I+G +G ++ A+ +F+
Sbjct: 354 LDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQ 412
Query: 121 RLLHRGLKPDSFSIVRVLTACT----QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
R+ G+ P + + +L A + ++ + +H + G + T++V +Y
Sbjct: 413 RMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMY 472
Query: 177 AKCGNMEKARRVFDQ--MPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
A CG +++A F + M ++ D+VSW+++I + +G K AL F M + P
Sbjct: 473 ASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQI 532
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T V VL ACA AL GV + + SN + T L MY +CG + A ++F ++
Sbjct: 533 TCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKV 592
Query: 294 K-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
++D V++NA+++ S NG A +F ++++ G +P+ +FV +L C+H GL DEG
Sbjct: 593 AVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEG 652
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+ F SM + + + P +HY C VD+LGR+G L +A ELI+ M ++P +VW LL CR
Sbjct: 653 WEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACR 712
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
++ D + + L+P + YV+LSNI + + KW++AA++R+ M +G++K G
Sbjct: 713 KYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGK 772
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF 532
SW+E+ VHEF+ GD SHP SE+IY +L+ L +++ G+VP T VL ++E EK+
Sbjct: 773 SWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERL 832
Query: 533 LACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
L HSE+LA+A G+++++ D +R+ KNLRVC DCH A K ISKI +EI+VRD +RFH
Sbjct: 833 LCQHSERLAIALGVMSSST-DTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHH 891
Query: 593 FIEGSCSCKDFW 604
F++GSCSC D+W
Sbjct: 892 FVDGSCSCGDYW 903
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 219/421 (52%), Gaps = 17/421 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I + + + AI ++ M+ EG TF VLKACAR D G H+ IV++G
Sbjct: 99 IITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESG 158
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + LL++Y CG +A A+ +F+ + ++++VSW A I+ G+L+ A+ +F+
Sbjct: 159 LEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQ 217
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G++P ++V L+ C + + A+ IH V E+G + + V+T+L YA+ G
Sbjct: 218 RMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLG 274
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++++A+ VFD+ E+D+VSW++M+ YA +G EA +F M E + P T+V +
Sbjct: 275 HLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNAST 334
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C+S L G + + VLG L+DMY +CG +A +F E + V
Sbjct: 335 GCSS---LRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF-EGIPGNAVS 390
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT----HAGLVDEGRQFF 356
WN +++G S G +K A +F +++ G+ P T++ LL A + EGR+
Sbjct: 391 WNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLH 450
Query: 357 NSM-SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEP--NAIVWGALLAGCRL 413
+ + S ++ P I +V + G +DEA + ME + + W A+++
Sbjct: 451 SRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQ 508
Query: 414 H 414
H
Sbjct: 509 H 509
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 191/383 (49%), Gaps = 28/383 (7%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+A + G R H+ IV GL+ E + LL LY+ C L D +VF + ++
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLE--EELGNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
SWT II+ Y G + AI MF R+ G++ D+ + + VL AC +LGDLS + IH
Sbjct: 93 EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
++ E+G +A L+ +Y CG + A +F++M E+D+VSW++ I A +G
Sbjct: 153 WIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDM 211
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL++F MQ E ++P T+V LS CA + S + + V+ T L
Sbjct: 212 ALELFQRMQLEGVRPARITLVITLSVCAKIRQARA---IHSIVRESGLEQTLVVSTALAS 268
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
YA+ G + QA +VF ++D V WNA++ + +G++ A +F ++ GI P+ T
Sbjct: 269 AYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVT 328
Query: 336 FVGLLCGCT--------HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
V GC+ HA +++G L I ++D+ R G +E
Sbjct: 329 LVNASTGCSSLRFGRMIHACALEKG------------LDRDIVLGNALLDMYTRCGSPEE 376
Query: 388 AHELIKSMPMEPNAIVWGALLAG 410
A L + +P NA+ W ++AG
Sbjct: 377 ARHLFEGIP--GNAVSWNTMIAG 397
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/596 (39%), Positives = 355/596 (59%), Gaps = 6/596 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ Y MR P+NF L +CA G + H VK GLD D V +L+
Sbjct: 460 AMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVK 519
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN-EGNLEEAINMFRRLLHRGLKPDSF 132
+Y CG +++ ++F+ + + ++VSW +I+ ++ E++ +F ++ GL P+
Sbjct: 520 MYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKV 579
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ V +L+A + L L K +H V + G + V +L+ YAK G+M+ ++F M
Sbjct: 580 TFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSM 639
Query: 193 P-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+D VSW+SMI GY NG +E +D + M N + T VL+ACAS+ ALE G
Sbjct: 640 SGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERG 699
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ +F R++ S+ V+ + L+DMY+KCGR+ A KVF M K++ WN+++SG + +
Sbjct: 700 MEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARH 759
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEH 371
G + A +F ++++ G P+ TFV +L C+HAGLVD G +F M + P IEH
Sbjct: 760 GLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMED-HGILPHIEH 818
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK---KTDLAEHVLNQLI 428
Y C++DLLGR+G+L + E I MPM+PN ++W +L CR K + DL + L+
Sbjct: 819 YSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLL 878
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
LEP N NYVL SN Y+A+ +W D AK R+ MG ++K G SWV + VH F+ GD
Sbjct: 879 ELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGD 938
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
SHP +++IY KL+ L K+K AG+VP T+ L+D+EEE K+ L+ HSEKLA+AF L
Sbjct: 939 RSHPNTKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTR 998
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
++ IRI KNLRVCGDCH A + IS+I R+II+RD+ RFH F +G CSC D+W
Sbjct: 999 SSSDVPIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 177/360 (49%), Gaps = 19/360 (5%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
R H +VK GL D F+ L+NLY LA A +VFD + ++N VSWT ++SGY+ G
Sbjct: 77 RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136
Query: 111 NLEEAINMFRRLLHRG---LKPDSFSIVRVLTACTQLGD--LSTAKWIHGYVNEAGKGRN 165
+EA +F+ +L G +P F+ VL AC G L+ A +HG V++ N
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196
Query: 166 VFVATSLVDLYAKC--GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM 223
V +L+ +Y C G +A++VFD P +D+++W++++ YA G+ +F M
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256
Query: 224 QREN----LKPEYYTMVGVLSACASLGALELGVWASSFME--RNEFLSNPVLGTTLIDMY 277
++ L+P +T G L SL + GV F ++ S+ +G+ L+ +
Sbjct: 257 LHDDSAIELRPNEHTF-GSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAF 315
Query: 278 AKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
A+ G + +A +F +K+++ V N ++ GL + A G+F + N +TFV
Sbjct: 316 ARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVV-NTDTFV 374
Query: 338 GLLCGCTHAGLVDE----GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
LL + ++ GR+ + R + I +V++ + G +D+A + +
Sbjct: 375 VLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFR 434
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 208/447 (46%), Gaps = 35/447 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGF---LPTNFTFPFVLKAC--AREHDFQLGVRSHSL 55
++ G+V + A + +M EG PT FTF VL+AC A V+ H L
Sbjct: 128 LVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGL 187
Query: 56 IVKAGLDCDEFVKTSLLNLYVHC--GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE 113
+ K + V +L+++Y +C G A +VFD P +++++W A++S Y +G +
Sbjct: 188 VSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVV 247
Query: 114 EAINMFRRLLHRG----LKPDSFSIVRVLTACTQLGDLSTA--KWIHGYVNEAGKGRNVF 167
+F +LH L+P+ + ++TA T L S+ + V ++G +++
Sbjct: 248 STFTLFMAMLHDDSAIELRPNEHTFGSLITA-TSLSSCSSGVLDQVFARVLKSGSSSDLY 306
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
V ++LV +A+ G +++A+ +F + E++ V+ + +I G +EA+ +F R++
Sbjct: 307 VGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMG-TRDS 365
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID-----------M 276
T V +LSA A E G + R + +L T LID M
Sbjct: 366 FVVNTDTFVVLLSAVAEFSIPEDG------LMRGREVHGHILRTGLIDLKIALSNGLVNM 419
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
YAKCG + +A +VFR + +D+V WN ++S L NG+ + A + + + I P+
Sbjct: 420 YAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAA 479
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
+ L C L+ G+Q + + L +V + G G E+ E+ SM
Sbjct: 480 ISGLSSCASLRLLTAGQQVHCDAVK-WGLDLDTSVSNALVKMYGDCGARSESWEIFNSMA 538
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHV 423
E + + W +++ G + AE V
Sbjct: 539 -EHDIVSWNSIM-GVMVSSHAPTAESV 563
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 134/283 (47%), Gaps = 24/283 (8%)
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
G+ + + +H + + G ++F++ LV+LYAK + AR+VFD M E++ VSW+ ++
Sbjct: 70 GEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLV 129
Query: 205 QGYASNGFPKEALDMFYNMQREN---LKPEYYTMVGVLSACASLGA--LELGVWASSFME 259
GY +G EA +F M E +P +T VL AC G L V +
Sbjct: 130 SGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVS 189
Query: 260 RNEFLSNPVLGTTLIDMYAKC--GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ + SN + LI MY C G QA +VF +D + WNA++S + GYV
Sbjct: 190 KTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVST 249
Query: 318 FGVFGQL----EKCGIQPNGNTFVGLLCGCT----HAGLVDEGRQFFNSMSRVFSLTPMI 369
F +F + ++PN +TF L+ + +G++D Q F +RV
Sbjct: 250 FTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLD---QVF---ARVLKSGSSS 303
Query: 370 EHY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ Y +V R G LDEA ++ ++ E NA+ L+ G
Sbjct: 304 DLYVGSALVSAFARHGMLDEAKDIFINLK-ERNAVTLNGLIVG 345
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 120/249 (48%), Gaps = 12/249 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G++ N Q ++ M + + TF VL ACA + G+ H+ +++
Sbjct: 651 MISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQ 710
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D V+++LL++Y CG + A KVF+ + KN SW ++ISGY G E+A+ +F
Sbjct: 711 LESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFE 770
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G PD + V VL+AC+ G + + + G ++ + ++DL + G
Sbjct: 771 EMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAG 830
Query: 181 NMEKARRVFDQMPEK-DIVSWSSMIQG--YASNG----FPKEALDMFYNMQREN-----L 228
+ K + ++MP K + + W +++ + +G KEA M ++ +N L
Sbjct: 831 KLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVL 890
Query: 229 KPEYYTMVG 237
+Y G
Sbjct: 891 ASNFYAATG 899
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/527 (41%), Positives = 312/527 (59%), Gaps = 3/527 (0%)
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR--GLKPDS-FSIVRV 137
LA A +FD +P ++ SW+AI+S ++ G A+ ++RR+L G D+ F+
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSA 168
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDI 197
L A T + +H +V G + V ++L D+YAK G ++ AR VFD+MP +D+
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDV 228
Query: 198 VSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF 257
VSW++M+ Y G E +F M R + P +T GVL ACA + +LG
Sbjct: 229 VSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGR 288
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
M ++ + G+ L+ MY+K G M A +VFR M D V W A++SG + NG A
Sbjct: 289 MAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEA 348
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
F L G +P+ TFVG+L C HAGLVD+G F+S+ + + +HY C++D
Sbjct: 349 LHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVID 408
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGN 437
LL RSG + A ++I +MP++PN +W +LL GCR+HK LA L +EP N
Sbjct: 409 LLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPAT 468
Query: 438 YVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKI 497
YV L+NIY++ +++ +R M +GI K+ SW+EV VH FLVGD SHP +E+I
Sbjct: 469 YVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEI 528
Query: 498 YSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRI 557
Y+ L +L K++ G+V T VL D+E+E+KQ + HSE+LA+AFG+I T I++
Sbjct: 529 YALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKV 588
Query: 558 AKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLR+CGDCH IKLISKI REIIVRD+NRFH F GSCSC+D+W
Sbjct: 589 FKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 169/315 (53%), Gaps = 7/315 (2%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G H +V+ G+D D V ++L ++Y G L DA VFD +P ++VVSWTA++ Y +
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFD 240
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
G E +F R++ G+ P+ F+ VL AC + K +HG + ++ G + F
Sbjct: 241 AGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFA 300
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
++LV +Y+K G+M A RVF MP+ D+VSW++MI GYA NG P EAL F +
Sbjct: 301 GSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGF 360
Query: 229 KPEYYTMVGVLSACASLGALE--LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+P++ T VGVLSACA G ++ LG++ S ++ +ID+ ++ G +A
Sbjct: 361 RPDHVTFVGVLSACAHAGLVDKGLGIF-HSIKDKYGIEHTADHYACVIDLLSRSGLFERA 419
Query: 287 CKVFREMKDK-DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCT 344
+ M K ++ +W +++ G ++ V++A+ L + I+P N T+V L
Sbjct: 420 EDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFE--IEPENPATYVTLANIYA 477
Query: 345 HAGLVDEGRQFFNSM 359
GL DE +M
Sbjct: 478 SVGLFDEVENMRRTM 492
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 36/280 (12%)
Query: 16 EFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLY 75
+ M G LP FT+ VL+ACA +LG + H + K+ F ++L+++Y
Sbjct: 249 RLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMY 308
Query: 76 VHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIV 135
G + A++VF +P ++VSWTA+ISGY G +EA++ F LL G +PD + V
Sbjct: 309 SKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFV 368
Query: 136 RVLTACTQLGDLSTAKWI-HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
VL+AC G + I H ++ G ++DL ++ G E+A + + MP
Sbjct: 369 GVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMP- 427
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
+KP + +L C + L WA
Sbjct: 428 ---------------------------------VKPNKFLWASLLGGCRIHKNVRLAWWA 454
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+ + E NP TL ++YA G + + R M+
Sbjct: 455 AEALFEIE-PENPATYVTLANIYASVGLFDEVENMRRTME 493
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 70/198 (35%), Gaps = 47/198 (23%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N A+ ++ + + GF P + TF VL ACA
Sbjct: 335 MISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACA------------------- 375
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTA-----IISGYINEGNLEEA 115
H G + L +F I DK + TA +I G E A
Sbjct: 376 ----------------HAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERA 419
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+M + +KP+ F +L C ++ A W + E + N +L ++
Sbjct: 420 EDMINTM---PVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEI-EPENPATYVTLANI 475
Query: 176 YAKCG---NMEKARRVFD 190
YA G +E RR +
Sbjct: 476 YASVGLFDEVENMRRTME 493
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/536 (41%), Positives = 329/536 (61%), Gaps = 25/536 (4%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINE-GNLEEAINMFRRLLHRGLK-PDSFSIVRVLTAC 141
A +VFD I + + W +I ++ EEA ++R++L RG PD + VL AC
Sbjct: 83 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESAPDKHTFPFVLKAC 142
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+ LS K +H + + G +V+V L+ Y CG ++ AR+VFD+MPE+ +VSW+
Sbjct: 143 AYIFGLSEGKQVHCQIVKHGFSGDVYVNNGLIHFYGSCGCLDLARKVFDEMPERSLVSWN 202
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
SMI G AL +F +MQ+ + +P+ YTM VLSACA LG+L LG W+ F+ RN
Sbjct: 203 SMIDALVRVGEYDSALQLFRDMQK-SFEPDGYTMQSVLSACAGLGSLSLGTWSHVFLLRN 261
Query: 262 ---EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ + ++ +LI+MY KCG + A +VF+ M+ D WNA++ G + +G + A
Sbjct: 262 CDVDVAMDVLIKNSLIEMYCKCGSLRMAEQVFQGMRKHDLASWNAMILGFATHGKAEEAM 321
Query: 319 GVFGQLEKCG--IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
F + K G ++PN TFV LL C H G+V++GRQ+F+ M R + + P +EHYGC++
Sbjct: 322 NCFDCMVKEGKNVKPNSVTFVALLIACNHRGMVNKGRQYFDMMVREYGIEPALEHYGCII 381
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLHKKTDLAEHVLNQLIALEPWN- 434
DLL R+G + EA +++ SMPM+P+A++W +LL A C+ +L+E + +I N
Sbjct: 382 DLLARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTMEDNQ 441
Query: 435 ------SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
SG YVLLS +Y+++++WND +R +M D GI+K GCS +E++G+ +EF GD
Sbjct: 442 SSNSNCSGAYVLLSRVYASANRWNDVGIVRKLMSDHGIRKEPGCSSIEINGISNEFFAGD 501
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
SHP +++IY +L + +L++ V T+ + K+Y L HSE+LA+AFGLI+
Sbjct: 502 TSHPQTKQIYQQLKVIDDRLRS--IVDATN-------DSSKEYSLRLHSERLAIAFGLIS 552
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
P+ IRI KNLRVC DCHE KLISK+ EIIVRD RFH F +GSCSC D+W
Sbjct: 553 LPPQTPIRIFKNLRVCSDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 608
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 173/328 (52%), Gaps = 16/328 (4%)
Query: 12 QHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
+ A Y M G P TFPFVLKACA G + H IVK G D +V
Sbjct: 113 EEAFMLYRKMLERGESAPDKHTFPFVLKACAYIFGLSEGKQVHCQIVKHGFSGDVYVNNG 172
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++ Y CG L A KVFD++P++++VSW ++I + G + A+ +FR + + +PD
Sbjct: 173 LIHFYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRVGEYDSALQLFRD-MQKSFEPD 231
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
+++ VL+AC LG LS W H ++ + +V + SL+++Y KCG++ A +
Sbjct: 232 GYTMQSVLSACAGLGSLSLGTWSHVFLLRNCDVDVAMDVLIKNSLIEMYCKCGSLRMAEQ 291
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVLSACASL 245
VF M + D+ SW++MI G+A++G +EA++ F M +E N+KP T V +L AC
Sbjct: 292 VFQGMRKHDLASWNAMILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVTFVALLIACNHR 351
Query: 246 GALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK-DQVVWN 302
G + G M R E+ P L +ID+ A+ G + +A + M K D V+W
Sbjct: 352 GMVNKGRQYFDMMVR-EYGIEPALEHYGCIIDLLARAGYITEAIDMVMSMPMKPDAVIWR 410
Query: 303 AVV-----SGLSMNGYVKVAFGVFGQLE 325
+++ G S+ ++A + G +E
Sbjct: 411 SLLDACCKKGASVELSEEIARNIIGTME 438
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 137/307 (44%), Gaps = 23/307 (7%)
Query: 136 RVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
R+L+ D+S K +H + + +F+ ++ L + ++ A RVFD +
Sbjct: 31 RILSLAETCSDMSQLKQLHAFTLRTTYPDEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 90
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYN--MQRENLKPEYYTMVGVLSACASLGALEL 250
W+++I+ A + KE M Y ++R P+ +T VL ACA + L
Sbjct: 91 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESAPDKHTFPFVLKACAYIFGLSE 150
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + ++ F + + LI Y CG + A KVF EM ++ V WN+++ L
Sbjct: 151 GKQVHCQIVKHGFSGDVYVNNGLIHFYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 210
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF------- 363
G A +F ++K +P+G T +L C AGL G + S VF
Sbjct: 211 VGEYDSALQLFRDMQK-SFEPDGYTMQSVLSAC--AGL---GSLSLGTWSHVFLLRNCDV 264
Query: 364 --SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
++ +I++ ++++ + G L A ++ + M + + W A++ G H K + A
Sbjct: 265 DVAMDVLIKN--SLIEMYCKCGSLRMAEQVFQGM-RKHDLASWNAMILGFATHGKAEEAM 321
Query: 422 HVLNQLI 428
+ + ++
Sbjct: 322 NCFDCMV 328
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/598 (37%), Positives = 353/598 (59%), Gaps = 13/598 (2%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
QH + ++ N T F L+ C D +HS +VK+GL D F L
Sbjct: 14 QHKLSLFHFHTN-----TKAHFVAKLQTCK---DLTSATSTHSNVVKSGLSNDTFATNHL 65
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+N Y+ + A K+FD++P +NVVSWT++++GY+++G A+ +F ++ + P+
Sbjct: 66 INCYLRLFTIDHAQKLFDEMPHRNVVSWTSLMAGYVSQGQPNMALCLFHQMQGTLVLPNE 125
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
F+ ++ AC+ L +L + IH V +G G N+ +SL+D+Y KC ++++AR +FD
Sbjct: 126 FTFATLINACSILANLEIGRRIHALVEVSGLGSNLVACSSLIDMYGKCNHVDEARLIFDS 185
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL-KPEYYTMVGVLSACASLGALEL 250
M +++VSW+SMI Y+ N AL +F L KP ++ + +SACASLG+L
Sbjct: 186 MCTRNVVSWTSMITTYSQNAQGHHALQLFKEFNHSRLDKPNHFMLCSAVSACASLGSLGS 245
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + R ++ V+ + L+DMYAKCG + + K+FR +++ + + +++ G +
Sbjct: 246 GKITHGVVIRLGHEASDVIASALVDMYAKCGCVNYSAKIFRRIQNPSVIPYTSMIVGAAK 305
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
G ++ +F ++ I+PN TFVG+L C+H+GLVD+G + +SM + +TP +
Sbjct: 306 YGLGILSLQLFQEMVVRRIKPNDITFVGVLHACSHSGLVDKGLELLDSMDGKYGVTPDAK 365
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPN--AIVWGALLAGCRLHKKTDLAEHVLNQLI 428
HY C+ D+LGR G+++EA++L KS+ +E + A++WG LL+ RL+ + D+A N+LI
Sbjct: 366 HYTCIADMLGRVGRIEEAYQLAKSVQVEGDGYAMLWGTLLSASRLYGRVDIALEASNRLI 425
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
+G YV LSN Y+ + W +A +RS M G+ K G SW+E+ + F GD
Sbjct: 426 ESNQQVAGAYVTLSNAYALAGDWENAHNLRSEMKHTGVYKEPGSSWIEIKESTYLFHAGD 485
Query: 489 NS-HPLSEKIYSKLDELATKLKAAGFVPTTDHVLF-DIEEEEKQYFLACHSEKLALAFGL 546
S + +I S L EL ++K G+V T ++F D+EEE K+ ++ HSEKLALAFGL
Sbjct: 486 ISKYTQGREILSLLRELEERMKGRGYVGGTKGLVFVDVEEEAKEEIVSMHSEKLALAFGL 545
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I T IRI KNLR+C DCH A KLIS I RE++VRD NRFH F G C+C DFW
Sbjct: 546 INTPKGVTIRIMKNLRMCRDCHGAFKLISDIVERELVVRDVNRFHHFKNGLCTCGDFW 603
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 176/338 (52%), Gaps = 5/338 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+VS A+ ++ M+ LP FTF ++ AC+ + ++G R H+L+ +G
Sbjct: 96 LMAGYVSQGQPNMALCLFHQMQGTLVLPNEFTFATLINACSILANLEIGRRIHALVEVSG 155
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + +SL+++Y C ++ +A +FD + +NVVSWT++I+ Y A+ +F+
Sbjct: 156 LGSNLVACSSLIDMYGKCNHVDEARLIFDSMCTRNVVSWTSMITTYSQNAQGHHALQLFK 215
Query: 121 RLLHRGL-KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
H L KP+ F + ++AC LG L + K HG V G + +A++LVD+YAKC
Sbjct: 216 EFNHSRLDKPNHFMLCSAVSACASLGSLGSGKITHGVVIRLGHEASDVIASALVDMYAKC 275
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + + ++F ++ ++ ++SMI G A G +L +F M +KP T VGVL
Sbjct: 276 GCVNYSAKIFRRIQNPSVIPYTSMIVGAAKYGLGILSLQLFQEMVVRRIKPNDITFVGVL 335
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLI-DMYAKCGRMAQACKVFREMK---D 295
AC+ G ++ G+ M+ ++ T I DM + GR+ +A ++ + ++ D
Sbjct: 336 HACSHSGLVDKGLELLDSMDGKYGVTPDAKHYTCIADMLGRVGRIEEAYQLAKSVQVEGD 395
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
++W ++S + G V +A +L + Q G
Sbjct: 396 GYAMLWGTLLSASRLYGRVDIALEASNRLIESNQQVAG 433
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/606 (37%), Positives = 354/606 (58%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI ++ N + AI+ Y M +G LP FTF V KA + G R+H V G
Sbjct: 147 MIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLG 206
Query: 61 LDCDE-FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ FV ++L+++Y G + DA V D + K+VV +TA+I GY + G E++ +F
Sbjct: 207 VGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVF 266
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R + +G++ + +++ VL C L DL++ + IHG + +AG V TSL+ +Y +C
Sbjct: 267 RNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRC 326
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++ + +VF Q + V+W+S+I G NG + AL F M R ++ P +T+ VL
Sbjct: 327 GLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVL 386
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+SL LE G + + + + +G LID Y KCG A VF + + D V
Sbjct: 387 RACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVV 446
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
N+++ + NG+ A +F ++ G++PN T++G+L C +AGL++EG F+S
Sbjct: 447 SVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSA 506
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
++ +HY CMVDLLGR+G+L EA LI + + + ++W LL+ CR+H ++
Sbjct: 507 RNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEM 565
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A+ V+N++I L P + G +VLLSN+Y+++ W+ +++S M + ++K SWV+V+
Sbjct: 566 AKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVER 625
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F+ GD SHP I KL+EL K+K G+VP T VL D++EE+K L HSEK
Sbjct: 626 EIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEK 685
Query: 540 LALAFGLITTAPKD-VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
LA+AF L + K+ IRI KNLRVCGDCH +K +SKI GR+II RD RFH F G C
Sbjct: 686 LAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLC 745
Query: 599 SCKDFW 604
SC D+W
Sbjct: 746 SCGDYW 751
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 208/411 (50%), Gaps = 41/411 (9%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++ Y+ CG + A KVFD++P +++V+W ++I+ YI G +EAI++++R++ G+ PD
Sbjct: 116 LIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPD 175
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG-RNVFVATSLVDLYAKCGNMEKARRVF 189
F+ V A + LG + + HG G G NVFV ++LVD+YAK G M AR V
Sbjct: 176 EFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVS 235
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
DQ+ KD+V ++++I GY+ +G E+L +F NM ++ ++ YT+ VL C +L L
Sbjct: 236 DQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLT 295
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + + S T+L+ MY +CG + + KVF++ + +QV W +V+ GL
Sbjct: 296 SGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLV 355
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL---- 365
NG ++A F Q+ + I PN T +L C+ ++++G+Q +++ F L
Sbjct: 356 QNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQ-IHAIVMKFGLDIDK 414
Query: 366 ---TPMIEHYG------------------------CMVDLLGRSGQLDEAHELIKSMP-- 396
+I+ YG M+ ++G EA +L M
Sbjct: 415 YVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDT 474
Query: 397 -MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYS 446
+EPN + W +L+ C + H+ + NSGN L + Y+
Sbjct: 475 GLEPNNVTWLGVLSACNNAGLLEEGCHIFSS-----ARNSGNIELTKDHYA 520
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 136/262 (51%), Gaps = 3/262 (1%)
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
+ L+D Y KCG++ AR+VFD++P + IV+W+SMI Y NG KEA+D++ M +
Sbjct: 112 LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDG 171
Query: 228 LKPEYYTMVGVLSACASLGALELGVWA-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+ P+ +T V A + LG + G A + +SN +G+ L+DMYAK G+M A
Sbjct: 172 ILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA 231
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
V ++ KD V++ A++ G S +G + VF + K GI+ N T +L C +
Sbjct: 232 RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNL 291
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
+ GR + + L + ++ + R G +D++ ++ K + PN + W +
Sbjct: 292 EDLTSGRLIHGLIVKA-GLESAVASQTSLLTMYYRCGLVDDSLKVFKQF-INPNQVTWTS 349
Query: 407 LLAGCRLHKKTDLAEHVLNQLI 428
++ G + + ++A Q++
Sbjct: 350 VIVGLVQNGREEIALLKFRQML 371
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/545 (40%), Positives = 333/545 (61%), Gaps = 1/545 (0%)
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D D ++++ Y G + DAL++F +P ++V+SW+++I+G + G E+A+ +FR
Sbjct: 177 MDRDVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFR 236
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR-NVFVATSLVDLYAKC 179
++ G+ S +V L+A ++ IH V + G + FV+ SLV YA C
Sbjct: 237 DMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGC 296
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
ME A RVF ++ K +V W++++ GY N +EAL++F M R ++ P + L
Sbjct: 297 KQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSAL 356
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
++C L +E G + + S +G +L+ MY+KCG ++ A VF+ + +K+ V
Sbjct: 357 NSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVV 416
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN+V+ G + +G A +F Q+ + G+ P+G T GLL C+H+G++ + R FF
Sbjct: 417 SWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYF 476
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ S+T IEHY MVD+LGR G+L+EA ++ SMPM+ N++VW ALL+ CR H DL
Sbjct: 477 GQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDL 536
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A+ NQ+ +EP S YVLLSN+Y++S +W + A IR M G+ K G SW+ + G
Sbjct: 537 AKRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKG 596
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
H+FL D SHPL+EKIY KL+ L KLK G+VP L D+E E+K+ L+ HSE+
Sbjct: 597 QKHKFLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSER 656
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL++T I + KNLRVCGDCH AIKL++KI REI+VRD++RFH F G CS
Sbjct: 657 LAIAFGLLSTVEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICS 716
Query: 600 CKDFW 604
C D+W
Sbjct: 717 CGDYW 721
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 179/361 (49%), Gaps = 9/361 (2%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T +L+ Y L +A+ +F IP K+VVSW +II G ++ G++ A +F + R +
Sbjct: 90 TIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTV- 148
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
S ++ +LG + A+ + + R+V +++ Y G ++ A ++
Sbjct: 149 ---VSWTTLVDGLLRLGIVQEAETLFWAMEPM--DRDVAAWNAMIHGYCSNGRVDDALQL 203
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F QMP +D++SWSSMI G NG ++AL +F +M + +V LSA A + A
Sbjct: 204 FCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAW 263
Query: 249 ELGVWAS-SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
+G+ S + ++ + + +L+ YA C +M AC+VF E+ K V+W A+++G
Sbjct: 264 RVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTG 323
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
+N + A VFG++ + + PN ++F L C ++ G+ + ++ L
Sbjct: 324 YGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKM-GLES 382
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
G +V + + G + +A + K + E N + W +++ GC H A + NQ+
Sbjct: 383 GGYVGGSLVVMYSKCGYVSDAVYVFKGIN-EKNVVSWNSVIVGCAQHGCGMWALALFNQM 441
Query: 428 I 428
+
Sbjct: 442 L 442
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 7/199 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ ND + A+E + M +P +F L +C D + G H+ VK G
Sbjct: 320 LLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMG 379
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ +V SL+ +Y CGY++DA+ VF I +KNVVSW ++I G G A+ +F
Sbjct: 380 LESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFN 439
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA----TSLVDLY 176
++L G+ PD ++ +L+AC+ G L A+ Y G+ R+V + TS+VD+
Sbjct: 440 QMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYF---GQKRSVTLTIEHYTSMVDVL 496
Query: 177 AKCGNMEKARRVFDQMPEK 195
+CG +E+A V MP K
Sbjct: 497 GRCGELEEAEAVVMSMPMK 515
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 17/272 (6%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+V + T ++ YA+ + +A +F ++P KD+VSW+S+I+G G A +F M
Sbjct: 85 HVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMP 144
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
R + + T+V L + E WA M+R+ N +I Y GR+
Sbjct: 145 RRTV-VSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWN-----AMIHGYCSNGRVD 198
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A ++F +M +D + W+++++GL NG + A +F + G+ + L+CG +
Sbjct: 199 DALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGV---LVCGLS 255
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHY-----GCMVDLLGRSGQLDEAHELIKSMPMEP 399
A + R VF L H+ +V Q++ A + + +
Sbjct: 256 AAAKIPAWRVGIQIHCSVFKLGDW--HFDEFVSASLVTFYAGCKQMEAACRVFGEV-VYK 312
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
+ ++W ALL G L+ K A V +++ ++
Sbjct: 313 SVVIWTALLTGYGLNDKHREALEVFGEMMRID 344
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/612 (35%), Positives = 355/612 (58%), Gaps = 15/612 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS--HSLIVK 58
++ G+V + + + MR G +F V+K C+ D + + H ++K
Sbjct: 181 LVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIK 240
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY------INEGNL 112
AGLD D F+ ++++++Y G L +A +F + + NVV + +I+G+ I +
Sbjct: 241 AGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVA 300
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
EA+ ++ + RG++P F+ VL AC G L K IHG V + + F+ ++L
Sbjct: 301 SEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSAL 360
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+DLY G ME R F P+ DIV+W++M+ G N ++AL +F+ LKP+
Sbjct: 361 IDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDL 420
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+T+ V++ACASL G F ++ F V+G + + MYA+ G + A + F+E
Sbjct: 421 FTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQE 480
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M+ D V W+AV+S + +G + A F ++ + PN TF+G+L C+H GLVDEG
Sbjct: 481 MESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEG 540
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+++ +M++ + L+P I+H C+VDLLGR+G+L +A I + + ++W +LLA CR
Sbjct: 541 LRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCR 600
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
+H+ + + V N+++ LEP +S +YV+L N+Y + + + A+K R +M +G++K G
Sbjct: 601 IHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGL 660
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYF 532
SW+E+ VH F+ GD SHP S IY+KL+E+ ++++ + TTD +I + E Q
Sbjct: 661 SWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEK---LATTDT---EISKRE-QNL 713
Query: 533 LACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
+ CHSEKLA+A G+I IR+ KNLRVC DCH +KLISK REII+RD RFH
Sbjct: 714 MNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHH 773
Query: 593 FIEGSCSCKDFW 604
F +GSCSC D+W
Sbjct: 774 FRDGSCSCADYW 785
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 205/427 (48%), Gaps = 18/427 (4%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
++E R G F++ L AC+R + G H+L + GL FV SL++
Sbjct: 93 SLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVS 152
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG + +A +VFD +++ VSW +++SGY+ G EE + +F + G+ +SF+
Sbjct: 153 MYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFA 212
Query: 134 IVRVLTACTQLGD--LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+ V+ C+ GD + A+ +HG V +AG +VF+ ++++D+YAK G + +A +F
Sbjct: 213 LGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRS 272
Query: 192 MPEKDIVSWSSMIQGYASN------GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+ E ++V +++MI G+ EAL ++ +Q ++P +T VL AC
Sbjct: 273 VQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLA 332
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
G LE G + + F + +G+ LID+Y G M + FR D V W A+V
Sbjct: 333 GYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMV 392
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
SG N + A +F + G++P+ T ++ C + G Q + F+
Sbjct: 393 SGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI-----QCFAT 447
Query: 366 TPMIEHYGCM----VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
+ + M V + RSG +D A + M + + W A+++ H A
Sbjct: 448 KSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESH-DVVSWSAVISCHAQHGCARDAL 506
Query: 422 HVLNQLI 428
H ++++
Sbjct: 507 HFFDEMV 513
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 183/365 (50%), Gaps = 17/365 (4%)
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F++ +LL Y G A ++ D++P +N VS+ +I Y EG ++ R
Sbjct: 44 FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G+ D FS L AC++ G L + +H G VFV+ SLV +Y+KCG M +A
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
RRVFD E+D VSW+S++ GY G +E + +F M+R + + + V+ C+
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223
Query: 246 --GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
G +++ + + S+ L + +IDMYAK G + +A +FR +++ + V++N
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283
Query: 304 VVSGLSMNGYV------KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
+++G V A ++ +++ G+QP TF +L C AG ++ G+Q
Sbjct: 284 MIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHG 343
Query: 358 SMSRVFSLTPMIEHY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC---R 412
+V T + + ++DL SG +++ +S P + + + W A+++GC
Sbjct: 344 ---QVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGCVQNE 399
Query: 413 LHKKT 417
LH+K
Sbjct: 400 LHEKA 404
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/493 (40%), Positives = 308/493 (62%), Gaps = 5/493 (1%)
Query: 116 INMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+ +RR+L + P +++ V+ +C L L K +H + +G G + +V +LV
Sbjct: 92 VAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTF 151
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y+KCG+ME AR+VFD+MPEK +V+W+S++ G+ NG ++A+ +FY M+ +P+ T
Sbjct: 152 YSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATF 211
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
V +LSACA GA+ LG W ++ N LGT LI++Y++CG + +A +VF +MK+
Sbjct: 212 VSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKE 271
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+ W A++S +GY K A +F ++E CG PN TFV +L C HAGLV++GR
Sbjct: 272 TNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRS 331
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI---VWGALLAGC 411
+ M+ + L P +EH+ C+VD+LGR+G LDEA+ I+ + NA +W A+L C
Sbjct: 332 VYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAMLGAC 391
Query: 412 RLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRG 471
++H+ DL + +LIALEP N G++V+LSNIY+ S K ++ + IR M ++K G
Sbjct: 392 KMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYALSGKTDEVSHIRDRMMRNNLRKQVG 451
Query: 472 CSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY 531
S +EV+ + F +GD SH + +IY L+ L ++ K G+ P ++ V+ +EEEEK++
Sbjct: 452 YSIIEVENKTYLFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEF 511
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L HSEKLA+AFGL+ T I + KNLR+C DCH A K IS ++ R+IIVRD RFH
Sbjct: 512 ALRYHSEKLAVAFGLLKTV-DSAITVVKNLRICEDCHSAFKYISIVSNRQIIVRDKLRFH 570
Query: 592 CFIEGSCSCKDFW 604
F GSCSC D+W
Sbjct: 571 HFQNGSCSCLDYW 583
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 171/305 (56%), Gaps = 6/305 (1%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
H + +Y M + P+N+TF V+K+CA ++G H V +G D +V+ +L+
Sbjct: 90 HCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALV 149
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
Y CG + A +VFD +P+K+VV+W +++SG+ G E+AI +F ++ G +PDS
Sbjct: 150 TFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPDSA 209
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ V +L+AC Q G +S W+H Y+ G NV + T+L++LY++CG++ KAR VFD+M
Sbjct: 210 TFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKM 269
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELG 251
E ++ +W++MI Y ++G+ K+A+D+F M+ + P T V VLSACA G +E G
Sbjct: 270 KETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAGLVEDG 329
Query: 252 VWASSFM-ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ----VVWNAVVS 306
M E + ++DM + G + +A + +++ +W A++
Sbjct: 330 RSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAMLG 389
Query: 307 GLSMN 311
M+
Sbjct: 390 ACKMH 394
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 2/194 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GF N + AI + MR GF P + TF +L ACA+ LG H IV G
Sbjct: 179 LVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEG 238
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + + T+L+NLY CG + A +VFD + + NV +WTA+IS Y G ++A+++F
Sbjct: 239 LDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFN 298
Query: 121 RLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAK 178
++ G P++ + V VL+AC G + + ++ + E+ + V +VD+ +
Sbjct: 299 KMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGR 358
Query: 179 CGNMEKARRVFDQM 192
G +++A R Q+
Sbjct: 359 AGFLDEAYRFIQQL 372
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/602 (37%), Positives = 339/602 (56%), Gaps = 3/602 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ ND +E + MR P T V+ AC D +LG + HS +V+
Sbjct: 207 MISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTA 266
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V SL+ +Y+ G+ +A VF + ++VVSWT IISG ++ ++A+ ++
Sbjct: 267 YDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYK 326
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G PD +I VL+AC LG L +H G V VA SL+D+Y+KC
Sbjct: 327 TMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCK 386
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+EKA +F Q+P+KD++SW+S+I G N EAL F M ++ KP T++ LS
Sbjct: 387 RIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALS 445
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA +GAL G + + + L ++D+Y +CGRM A F + +KD
Sbjct: 446 ACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NLNEKDVGA 504
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WN +++G + G + +F ++ + I P+ TF+ LLC C+ +G+V EG ++F M
Sbjct: 505 WNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMK 564
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ +TP ++HY C+VDLLGR+G+L+EAHE I+ MP++P+ +WGALL CR+H+ L
Sbjct: 565 VNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLG 624
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E + + + G Y+LL N+Y+ S KW++ AK+R M ++G+ GCSWVEV G
Sbjct: 625 ELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGK 684
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH FL GDN HP ++I L+ K+K +GF + I+ + F HSE+
Sbjct: 685 VHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQECSSMDGIQTSKADIFCG-HSERQ 743
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A+ LI +AP I + KNL +C CH +K ISKI REI VRD +FH F +G CSC
Sbjct: 744 AIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISVRDTEQFHHFKDGLCSC 803
Query: 601 KD 602
D
Sbjct: 804 GD 805
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 187/355 (52%), Gaps = 1/355 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ F A+ Y+ + G P +TFP VL++CA D G H+ +V+
Sbjct: 106 LVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFD 165
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D V +L+ +YV CG + A +FD +P ++ +SW A+ISGY E + +F
Sbjct: 166 FDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFF 225
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ + PD ++ V++AC LGD +H YV N+ V SL+ +Y G
Sbjct: 226 RMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVG 285
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ ++A VF M +D+VSW+++I G N P +AL+ + M+ P+ T+ VLS
Sbjct: 286 HWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLS 345
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACASLG L++G+ ER + V+ +LIDMY+KC R+ +A ++F ++ DKD +
Sbjct: 346 ACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVIS 405
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
W +V++GL +N A F ++ +PN T + L C G + G++
Sbjct: 406 WTSVINGLRINNRCFEALIFFRKM-ILKSKPNSVTLISALSACARVGALMCGKEI 459
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 199/411 (48%), Gaps = 23/411 (5%)
Query: 6 VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
V DCF I + R G+ + + VL + +LG
Sbjct: 31 VEEDCFVALIRLCENKR--GYSEGEYVWKAVLSSLVTLLSVRLG---------------- 72
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
+LL+++V G + +A VF + ++++ SW ++ GY G +EA+ ++ R+L
Sbjct: 73 ---NALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWA 129
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G++PD ++ VL +C DL + +H +V +V V +L+ +Y KCG++ A
Sbjct: 130 GIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSA 189
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
R +FD+MP +D +SW++MI GY N E L++F+ M+ ++ P+ TM V+SAC L
Sbjct: 190 RMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELL 249
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
G LG S++ R + N + +LI MY G +A VF M+ +D V W ++
Sbjct: 250 GDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTII 309
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
SG N A + +E G P+ T +L C G +D G + R +
Sbjct: 310 SGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHI 369
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
++ ++D+ + ++++A E+ +P + + I W +++ G R++ +
Sbjct: 370 LYVVVA-NSLIDMYSKCKRIEKALEIFHQIP-DKDVISWTSVINGLRINNR 418
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 139/303 (45%), Gaps = 3/303 (0%)
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI-HGYVNEAGKGRNVFV 168
GNLE+A+ + + + V ++ C S +++ ++ +V +
Sbjct: 12 GNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRL 71
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
+L+ ++ + G++ A VF +M E+D+ SW+ ++ GY GF EAL +++ + +
Sbjct: 72 GNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGI 131
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+P+ YT VL +CA L G + + R +F + + LI MY KCG + A
Sbjct: 132 RPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARM 191
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+F +M +D++ WNA++SG N +F ++ + I P+ T ++ C G
Sbjct: 192 LFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGD 251
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
G Q + + R + I Y ++ + G EA + M + + W ++
Sbjct: 252 ERLGTQLHSYVVRT-AYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECR-DVVSWTTII 309
Query: 409 AGC 411
+GC
Sbjct: 310 SGC 312
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/535 (39%), Positives = 324/535 (60%), Gaps = 2/535 (0%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L Y+ G L A K+FD++P++NV +W A+++G N G EE++ F + G+ PD
Sbjct: 175 LFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPD 234
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
F + V C L D+ T + +H YV +G R++ V +SL +Y +CG +++ V
Sbjct: 235 EFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLR 294
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+P IVS +++I G NG + AL+ F M+ + + T V +S+C+ L AL
Sbjct: 295 MLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQ 354
Query: 251 GVWA-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G M+ PV+ T L+ MY++CG + + +VF D + +A++S
Sbjct: 355 GQQIHGQVMKAGVDKVVPVM-TCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYG 413
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G+ + A +F Q+ G +P+ TF+ LL C+H+GL +EG F M++ + + P +
Sbjct: 414 FHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSV 473
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+HY C+VDLLGRSG LDEA LI SMP+ P+ ++W LL+ C+ K D+AE + ++I
Sbjct: 474 KHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIE 533
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
L+P +S +YVLLSNI + S +W D +++R M D ++K G SWVE+ G +H+F GD
Sbjct: 534 LDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDE 593
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
SHP ++I L+E+ K++ G+ P VL D+E+EEK+ L+ HSEKLA+AF ++
Sbjct: 594 SHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSL 653
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IR+ KNLRVC DCH AIKL+S++TGREI+VRD +RFH F +G CSC+D+W
Sbjct: 654 PEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 152/309 (49%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G + + ++ F+ MR EG P F V + CA D G + H+ +V++G
Sbjct: 206 MVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSG 265
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D V +SL ++Y+ CG L + V +P ++VS II+G G+ E A+ F
Sbjct: 266 LDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFC 325
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ D + V +++C+ L L+ + IHG V +AG + V V T LV +Y++CG
Sbjct: 326 MMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCG 385
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + RVF D S+MI Y +G ++A+++F M +P T + +L
Sbjct: 386 CLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLY 445
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G E G+ M + + V T ++D+ + G + +A + M D
Sbjct: 446 ACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDG 505
Query: 299 VVWNAVVSG 307
V+W ++S
Sbjct: 506 VIWKTLLSA 514
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 188/414 (45%), Gaps = 34/414 (8%)
Query: 48 LGVRSHSLIVKAGLDC----DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAII 103
L +RS +V LD DEFV+ G L DAL+ P + V+ W+
Sbjct: 58 LSLRSMVGLVALSLDTVATKDEFVR------LCATGRLRDALRR----PFRGVL-WSDAA 106
Query: 104 SGYINEGNLEEAINMFRRL----LHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE 159
+ + A+ R+L G D F+ ++ A LGDL+ A+ + +
Sbjct: 107 RLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPR 166
Query: 160 AGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDM 219
RNV L Y K G++ AR++FD+MPE+++ +W++M+ G + GF +E+L
Sbjct: 167 ----RNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGF 222
Query: 220 FYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK 279
F +M+RE + P+ + + V CA L + G +++ R+ + +G++L MY +
Sbjct: 223 FLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMR 282
Query: 280 CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
CG + + V R + V N +++G + NG + A F + G+ + TFV
Sbjct: 283 CGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSA 342
Query: 340 LCGCTHAGLVDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
+ C+ + +G+Q + + V + P++ C+V + R G L ++ +
Sbjct: 343 ISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMT---CLVHMYSRCGCLGDSERVFFGY-C 398
Query: 398 EPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWNSGNYVLLSNIYSASH 449
+ + A+++ H A + Q++ EP + L+ +Y+ SH
Sbjct: 399 GSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEP---SDVTFLALLYACSH 449
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/535 (39%), Positives = 324/535 (60%), Gaps = 2/535 (0%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L Y+ G L A K+FD++P++NV +W A+++G N G EE++ F + G+ PD
Sbjct: 113 LFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPD 172
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
F + V C L D+ T + +H YV +G R++ V +SL +Y +CG +++ V
Sbjct: 173 EFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLR 232
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+P IVS +++I G NG + AL+ F M+ + + T V +S+C+ L AL
Sbjct: 233 MLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQ 292
Query: 251 GVWA-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G M+ PV+ T L+ MY++CG + + +VF D + +A++S
Sbjct: 293 GQQIHGQVMKAGVDKVVPVM-TCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYG 351
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+G+ + A +F Q+ G +P+ TF+ LL C+H+GL +EG F M++ + + P +
Sbjct: 352 FHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSV 411
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+HY C+VDLLGRSG LDEA LI SMP+ P+ ++W LL+ C+ K D+AE + ++I
Sbjct: 412 KHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIE 471
Query: 430 LEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDN 489
L+P +S +YVLLSNI + S +W D +++R M D ++K G SWVE+ G +H+F GD
Sbjct: 472 LDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDE 531
Query: 490 SHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITT 549
SHP ++I L+E+ K++ G+ P VL D+E+EEK+ L+ HSEKLA+AF ++
Sbjct: 532 SHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSL 591
Query: 550 APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
IR+ KNLRVC DCH AIKL+S++TGREI+VRD +RFH F +G CSC+D+W
Sbjct: 592 PEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 152/309 (49%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G + + ++ F+ MR EG P F V + CA D G + H+ +V++G
Sbjct: 144 MVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSG 203
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD D V +SL ++Y+ CG L + V +P ++VS II+G G+ E A+ F
Sbjct: 204 LDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFC 263
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ D + V +++C+ L L+ + IHG V +AG + V V T LV +Y++CG
Sbjct: 264 MMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCG 323
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + RVF D S+MI Y +G ++A+++F M +P T + +L
Sbjct: 324 CLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLY 383
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G E G+ M + + V T ++D+ + G + +A + M D
Sbjct: 384 ACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDG 443
Query: 299 VVWNAVVSG 307
V+W ++S
Sbjct: 444 VIWKTLLSA 452
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 156/328 (47%), Gaps = 15/328 (4%)
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
G D F+ ++ A LGDL+ A+ + + RNV L Y K G++ A
Sbjct: 71 GAATDRFTANHLMLAYADLGDLTAARELFERIPR----RNVMSWNILFGGYIKNGDLGGA 126
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
R++FD+MPE+++ +W++M+ G + GF +E+L F +M+RE + P+ + + V CA L
Sbjct: 127 RKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGL 186
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
+ G +++ R+ + +G++L MY +CG + + V R + V N ++
Sbjct: 187 RDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTII 246
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR--VF 363
+G + NG + A F + G+ + TFV + C+ + +G+Q + + V
Sbjct: 247 AGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVD 306
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV 423
+ P++ C+V + R G L ++ + + + A+++ H A +
Sbjct: 307 KVVPVMT---CLVHMYSRCGCLGDSERVFFGY-CGSDTFLLSAMISAYGFHGHGQKAIEL 362
Query: 424 LNQLI--ALEPWNSGNYVLLSNIYSASH 449
Q++ EP + L+ +Y+ SH
Sbjct: 363 FKQMMNGGAEP---SDVTFLALLYACSH 387
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/605 (34%), Positives = 349/605 (57%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMR-NEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G++ N E + M + P + + +C + + G + H +K+
Sbjct: 94 LMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-GKQCHGYALKS 152
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL+ ++VK +L+ LY C + A+++ +P ++ + +++G + ++ EA+++
Sbjct: 153 GLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVL 212
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ ++ G++ ++ + V + C L D++ K +H + ++ +V++ +S++D+Y KC
Sbjct: 213 KLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKC 272
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+ R FD++ +++VSW+S+I Y N F +EAL++F M+ + + P YTM +
Sbjct: 273 GNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLF 332
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
++ A L AL LG + E++ N ++G LI MY K G + A VF M + +
Sbjct: 333 NSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNII 392
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA+++G S +G K A +F + G +PN TF+G++ C H LVDEG +FN +
Sbjct: 393 TWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHL 452
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ F + P +EHY C+V LL RSG+LDEA ++S + + + W LL C +HK D
Sbjct: 453 MKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDK 512
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ L+ LEP + G Y+LLSN+++ +W+ +IR +M ++ ++K G SW+E+
Sbjct: 513 GRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRN 572
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V H F D HP + IY + +L +K++ G+VP D+VL DIE+E+K L+ HSEK
Sbjct: 573 VAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEK 632
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+GL+ T I + KNLR+C DCH AIKLISK+ R I+VRD NRFH F G CS
Sbjct: 633 LAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCS 692
Query: 600 CKDFW 604
C D+W
Sbjct: 693 CGDYW 697
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 196/406 (48%), Gaps = 10/406 (2%)
Query: 15 IEFYNSMRNEGFLPTNFTFPF-VLKACAREHDFQLG--VRSHSLIVKAGL-DCDEFVKTS 70
++F + FL + P +LK A + + G + +H I D S
Sbjct: 3 VKFTPFLSRSNFLASPHQDPIKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNS 62
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLKP 129
L+NLYV C ++ A K+FD +P +NVVSW+A+++GY+ GN E +F++++ + + P
Sbjct: 63 LINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFP 122
Query: 130 DSFSIVRVLTAC-TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
+ + I +++C +Q+ K HGY ++G + +V +L+ LY+KC ++ A ++
Sbjct: 123 NEYVIATAISSCDSQM--YVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQI 180
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
+P DI ++ ++ G + EA+D+ + E ++ T V + CASL +
Sbjct: 181 LYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDI 240
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
LG + M +++ + +G+++IDMY KCG + F ++ ++ V W ++++
Sbjct: 241 TLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAY 300
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
N + + A +F ++E I PN T L + G Q ++ + L
Sbjct: 301 FQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQ-LHARAEKSGLKGN 359
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ ++ + +SG + A + +M N I W A++ G H
Sbjct: 360 VMVGNALIIMYFKSGDILAAQSVFSNMTC-CNIITWNAIITGHSHH 404
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 157/339 (46%), Gaps = 24/339 (7%)
Query: 135 VRVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
+++L +L + IH ++ N + V SL++LY KC + AR++FD
Sbjct: 23 IKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDS 82
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALE- 249
MP +++VSWS+++ GY NG P E ++F M ++N+ P Y + +S+C S +E
Sbjct: 83 MPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVEG 142
Query: 250 ---LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
G S +E ++++ N LI +Y+KC + A ++ + D +N VV+
Sbjct: 143 KQCHGYALKSGLEFHQYVKN-----ALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVN 197
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
GL + ++ A V + GI+ N T+V + C + G+Q M + +
Sbjct: 198 GLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKS-DID 256
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
+ ++D+ G+ G + + N + W +++A + + + E LN
Sbjct: 257 CDVYIGSSIIDMYGKCGNVLSGRTFFDRL-QSRNVVSWTSIIAA---YFQNEFFEEALNL 312
Query: 427 LIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSM-MGDK 464
+E + N Y+ + +N AA + ++ +GD+
Sbjct: 313 FSKMEI-----DCIPPNEYTMAVLFNSAAGLSALCLGDQ 346
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/561 (41%), Positives = 331/561 (59%), Gaps = 40/561 (7%)
Query: 81 LADALKVFDDIPDKNVVSWTAIISGY-INEGNLEEAINMFRRLLH-RGLKPDSFSIVRVL 138
L A K+FD IP ++ + +I + ++ + ++I +FR L+ G P+ +S V
Sbjct: 226 LTYAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAF 285
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD-------- 190
AC + + + + + G NVFV +L+ ++ K G +E AR VFD
Sbjct: 286 GACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFY 345
Query: 191 -----------------------QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
+M E+D+VSWS++I GY G EALD F+ M +
Sbjct: 346 SWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSE 405
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+KP YTMV L+AC++L AL+ G W ++ R+ N L +LIDMYAKCG + A
Sbjct: 406 VKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSAS 465
Query: 288 KVFREMKDKDQV-VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
VF E K K +V WNA++ G +M+G + A VF +++ + PN TF+ LL C+H
Sbjct: 466 SVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHG 525
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
+V EG+ +F M+ + + P IEHYGCMVDLL RSG L ++ E+I SMPM P+ +WGA
Sbjct: 526 YMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGA 585
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIR---SMMGD 463
LL CR++K + + + ++P + G VLL NIYS S +WN+A +R + D
Sbjct: 586 LLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSD 645
Query: 464 KGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD 523
+ +KI G S +E++GV HEFLVGD SHP S +IYS LDE+ +KLK AG+VP VL D
Sbjct: 646 R--KKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYVPELGEVLLD 703
Query: 524 I-EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREI 582
+EE+K+ L+ HSEKLA+AFGL+ TAP IRI KNLRVCGDCH+A K ISK+ R I
Sbjct: 704 FDDEEDKETALSVHSEKLAIAFGLMNTAPGTPIRIVKNLRVCGDCHQATKFISKVYDRVI 763
Query: 583 IVRDNNRFHCFIEGSCSCKDF 603
IVRD R+H F +G CSCKD+
Sbjct: 764 IVRDRMRYHHFKDGICSCKDY 784
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 166/328 (50%), Gaps = 40/328 (12%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
F + +R+ G+ P ++F F AC + G + + VK GLD + FV +L+ ++
Sbjct: 265 FRSLIRDSGYFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFG 324
Query: 77 HCGYLADALKVFD-------------------------------DIPDKNVVSWTAIISG 105
G + DA VFD ++ +++VVSW+ II+G
Sbjct: 325 KWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAG 384
Query: 106 YINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
Y+ G EA++ F ++L +KP+ +++V L AC+ L L KWIH Y+ N
Sbjct: 385 YVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMN 444
Query: 166 VFVATSLVDLYAKCGNMEKARRVF-DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+ SL+D+YAKCG ++ A VF + ++ + W++MI G+A +G P+EA+++F M+
Sbjct: 445 DRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMK 504
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFME--RNEFLSNPVLGT--TLIDMYAKC 280
E + P T + +L+AC+ ++ G S+ E +++ NP + ++D+ ++
Sbjct: 505 VEKVSPNKVTFIALLNACSHGYMVKEG---KSYFELMASDYGINPEIEHYGCMVDLLSRS 561
Query: 281 GRMAQACKVFREMK-DKDQVVWNAVVSG 307
G + + ++ M D +W A+++
Sbjct: 562 GHLKDSEEMILSMPMAPDVAIWGALLNA 589
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+V CF A++F++ M P +T L AC+ G H I +
Sbjct: 381 IIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDN 440
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
+ ++ + SL+++Y CG + A VF + + V W A+I G+ G EEAIN+F
Sbjct: 441 IKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVF 500
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS-------- 171
++ + P+ + + +L AC+ HGY+ + GK +A+
Sbjct: 501 EKMKVEKVSPNKVTFIALLNACS-----------HGYMVKEGKSYFELMASDYGINPEIE 549
Query: 172 ----LVDLYAKCGNMEKARRVFDQMP-EKDIVSWSSMIQG 206
+VDL ++ G+++ + + MP D+ W +++
Sbjct: 550 HYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNA 589
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/567 (38%), Positives = 326/567 (57%), Gaps = 40/567 (7%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
+++ Y+ + +A +F+ +P +N +SW +I+GY G E+A+ + L +G+ P
Sbjct: 357 AMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLP 416
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
S+ AC+ + L T K +H +AG N +V +L+ LY K ++ R++F
Sbjct: 417 SLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIF 476
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA------ 243
D+M KD VS++S + N EA D+F NM P+ + ++SACA
Sbjct: 477 DRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP----SPDVVSWTTIISACAQADQGN 532
Query: 244 -----------------------------SLGALELGVWASSFMERNEFLSNPVLGTTLI 274
+LGA +LG + + S V+ L+
Sbjct: 533 EAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALV 592
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
MY KC A + KVF M+++D WN +++G + +G + A ++ + G+ PN
Sbjct: 593 SMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEV 651
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
TFVGLL C+H+GLVDEG QFF SMS + LTP++EHY CMVDLLGR+G + A I
Sbjct: 652 TFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYD 711
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDA 454
MP+EP++++W ALL C++HK ++ +L ++EP N+GNYV+LSNIYS+ W++
Sbjct: 712 MPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEV 771
Query: 455 AKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFV 514
AK+R +M ++G+ K GCSW+++ +H F+ GD H + IY+ L EL T LKA G+V
Sbjct: 772 AKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYV 831
Query: 515 PTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLI 574
P TD VL DI+EE+K+ L HSEKLA+A+GL+ T I+I KNLR+CGDCH IK +
Sbjct: 832 PDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFV 891
Query: 575 SKITGREIIVRDNNRFHCFIEGSCSCK 601
S +T REI VRD NRFH F GSCSC+
Sbjct: 892 SSVTKREIDVRDGNRFHHFRNGSCSCE 918
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 160/363 (44%), Gaps = 53/363 (14%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
T LL+ Y G + DA +VFD + +N V+W A+++ Y+ G++ A +F
Sbjct: 99 TILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLF--------- 149
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
+A R+V +++ Y ME+AR +
Sbjct: 150 ------------------------------DAMPSRDVSSWNTMLTGYCHSQLMEEARNL 179
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F++MPE++ VSW+ MI GY A DMF M E + PE +V VLSA LG
Sbjct: 180 FERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKP 239
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAK-CGRMAQACKVFREMKDKDQVVWNAVVSG 307
+ + + F + V+GT +++ Y K + A K F M +++ W+ +++
Sbjct: 240 GILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAA 299
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
LS G + AF V+ Q + P+ + +L G G +D+ + F+ + P
Sbjct: 300 LSQAGRIDDAFAVY-QRDPLKSVPSRTS---MLTGLARYGRIDDAKILFDQIHE-----P 350
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ + M+ ++ +DEA +L MP N I W ++AG + + +E L L
Sbjct: 351 NVVSWNAMITGYMQNEMVDEAEDLFNRMPFR-NTISWAGMIAG---YARNGRSEQALVSL 406
Query: 428 IAL 430
AL
Sbjct: 407 QAL 409
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 188/420 (44%), Gaps = 31/420 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRS--HSLIVK 58
MI G+V + A + + +M EG P VL A H + G+ H L+ K
Sbjct: 194 MISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAV--RHLGKPGILESIHVLVHK 251
Query: 59 AGLDCDEFVKTSLLNLYVH-CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
G + D V T++LN Y L A+K F+ + +N +W+ II+ G +++A
Sbjct: 252 TGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFA 311
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+++R + + S +LT + G + AK + ++E NV +++ Y
Sbjct: 312 VYQRDPLKSVP----SRTSMLTGLARYGRIDDAKILFDQIHEP----NVVSWNAMITGYM 363
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
+ +++A +F++MP ++ +SW+ MI GYA NG ++AL + R+ + P ++
Sbjct: 364 QNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTS 423
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
AC+++ ALE G S + N + LI +Y K + ++F M KD
Sbjct: 424 SFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKD 483
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V +N+ +S L N A VF + P+ ++ ++ C A +E + F
Sbjct: 484 TVSYNSFMSALVQNNLFDEARDVFNNMPS----PDVVSWTTIISACAQADQGNEAVEIFR 539
Query: 358 SM--SRVFSLTPMIEHYGCMVDLLGRSGQL------DEAHELIKSMPMEPNAIVWGALLA 409
SM R P+ + LLG SG L + H + + M+ +V AL++
Sbjct: 540 SMLHERELPNPPI------LTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVS 593
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 172/373 (46%), Gaps = 40/373 (10%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
++L Y H + +A +F+ +P++N VSWT +ISGY+ A +MFR +L G+ P
Sbjct: 162 TMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTP 221
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM-EKARRV 188
+ ++V VL+A LG + IH V++ G R+V V T++++ Y K NM + A +
Sbjct: 222 EQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKF 281
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F+ M ++ +WS++I + G +A ++ QR+ LK + +L+ A G +
Sbjct: 282 FEGMAARNEYTWSTIIAALSQAGRIDDAFAVY---QRDPLK-SVPSRTSMLTGLARYGRI 337
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+ + + N V +I Y + + +A +F M ++ + W +++G
Sbjct: 338 D----DAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGY 393
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF----------FN- 357
+ NG + A L + G+ P+ ++ C++ ++ G+Q FN
Sbjct: 394 ARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNS 453
Query: 358 -----------------SMSRVFSLTPMIE--HYGCMVDLLGRSGQLDEAHELIKSMPME 398
S+ ++F + + Y + L ++ DEA ++ +MP
Sbjct: 454 YVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP-S 512
Query: 399 PNAIVWGALLAGC 411
P+ + W +++ C
Sbjct: 513 PDVVSWTTIISAC 525
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 51/252 (20%)
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
+ G + +AR VFD MP +DI++W+SMI Y +NG P + + NL+
Sbjct: 44 GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLR------- 96
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
GT L+ YA+ GR+ A +VF M +
Sbjct: 97 --------------------------------TGTILLSGYARAGRVRDARRVFDGMGVR 124
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF 356
+ V WNA+V+ NG + +A +F + + +++ +L G H+ L++E R F
Sbjct: 125 NTVAWNAMVTCYVQNGDITLARKLFDAMPSRDV----SSWNTMLTGYCHSQLMEEARNLF 180
Query: 357 NSMSRV--FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
M S T MI Y +++ GR+ + P +PN + ++L+ R
Sbjct: 181 ERMPERNGVSWTVMISGY-VLIEQHGRAWDMFRTMLCEGMTPEQPNLV---SVLSAVRHL 236
Query: 415 KKTDLAE--HVL 424
K + E HVL
Sbjct: 237 GKPGILESIHVL 248
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/521 (40%), Positives = 326/521 (62%), Gaps = 8/521 (1%)
Query: 92 PDKNVVSWTAIISGYINEGNLE---EAINMFRRLL--HRGL-KPDSFSIVRVLTACTQLG 145
P N + II Y + N +A+++F +L H + KPD+F+ L +C +L
Sbjct: 46 PSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKSCGRLK 105
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
AK +HG++N+ G G ++++ +L+ +Y++ G + AR+VFD+M +D+VSW+SMI
Sbjct: 106 LTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIA 165
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
G+ ++ EA+ +F M + T++ VL CA GAL +G ++
Sbjct: 166 GFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDF 225
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+ T LI MY+KCG + A +VF ++ D+D VW A++ GL+ +G K A +F ++E
Sbjct: 226 KANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEME 285
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
C ++P+ T + +L +AGLV EG FFN + + +S+ P I+H+GCMVDLL + G L
Sbjct: 286 TCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCL 345
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN--QLIALEPWNSGNYVLLSN 443
+EA + I +MPM+P+A++W L+ C++H T+ AE ++ +L + +SG+Y+L SN
Sbjct: 346 EEAEDFINAMPMKPDAVIWRTLIWACKVHADTERAERLMKHLELQGMSAHDSGSYILASN 405
Query: 444 IYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDE 503
+Y+++ KW D A++R +M KG+ K G S +EVDGVVHEF++GD HP +EKI+ KLD+
Sbjct: 406 VYASTGKWCDKAEVRELMNKKGLVKPPGSSRIEVDGVVHEFVMGDYDHPDTEKIFIKLDQ 465
Query: 504 LATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRV 563
+ KL+ G+ P V+ ++++EEK L HSEKLALA+GLI T P IRI KNLR
Sbjct: 466 MVDKLRKEGYNPKVSEVMLEMDDEEKAIQLLHHSEKLALAYGLIRTCPGSKIRIVKNLRS 525
Query: 564 CGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
C DCHE +KLISK+ R+IIVRD RFH F G CSCKD+W
Sbjct: 526 CEDCHEFMKLISKVYQRDIIVRDRIRFHHFKNGDCSCKDYW 566
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 167/304 (54%), Gaps = 2/304 (0%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P FT+ F LK+C R Q + H I K G D +++ +L+++Y G L A +V
Sbjct: 89 PDTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQV 148
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
FD + ++VVSWT++I+G++N EAI +F+R+L G+ + +++ VL C G L
Sbjct: 149 FDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGAL 208
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
S + +HG V E G V T+L+ +Y+KCG +E AR VFD + ++D+ W++MI G
Sbjct: 209 SVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGL 268
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG-VWASSFMERNEFLSN 266
A +G KEA+++F M+ N+KP+ T++ VLSA + G + G ++ + +R N
Sbjct: 269 ACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPN 328
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
++D+ AK G + +A M K D V+W ++ ++ + A + LE
Sbjct: 329 IKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHADTERAERLMKHLE 388
Query: 326 KCGI 329
G+
Sbjct: 389 LQGM 392
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GFV++ AI+ + M G T VL+ CA +G + H ++ + G
Sbjct: 163 MIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKG 222
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D V T+L+++Y CG L A +VFDD+ D++V WTA+I G G +EAI +F
Sbjct: 223 IDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFL 282
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR-NVFVATSLVDLYAKC 179
+ +KPD +I+ VL+A G + V + + N+ +VDL AK
Sbjct: 283 EMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKG 342
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMI 204
G +E+A + MP K D V W ++I
Sbjct: 343 GCLEEAEDFINAMPMKPDAVIWRTLI 368
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/501 (40%), Positives = 314/501 (62%), Gaps = 1/501 (0%)
Query: 105 GYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR 164
GY G L EA+ ++ +L ++P +F+ L AC L +L + +H V ++ +G
Sbjct: 4 GYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGP 63
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
+ V L+ LY +C + +VFDQMPE+++ SW+S+I G+ EALD+F MQ
Sbjct: 64 DQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQ 123
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
RE + + T+ +L CA + AL G + + ++ + ++ +L+DMY KCG +
Sbjct: 124 REGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVD 183
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
++F M+ KD WN +++G ++NGY++VA +F ++ CGI+P+ TF+ LL GC+
Sbjct: 184 YGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCS 243
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
HAGL ++G++ F+ M F ++P +EHY C+VD+LGR+G++D A ++K+MPM+ + +W
Sbjct: 244 HAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIW 303
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
G+LL CRLH + LAE + N+L LEP+N GNYV+LSNIY+ + W+ +R MM +
Sbjct: 304 GSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREMMQTR 363
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL-DELATKLKAAGFVPTTDHVLFD 523
I+K GCSW++V +H F+ G + Y K+ ++L ++ G++P TD VL D
Sbjct: 364 RIRKEAGCSWIQVKNKIHSFVAGGGFEFRNSDEYKKIWNKLREAMEEFGYIPNTDVVLHD 423
Query: 524 IEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREII 583
+ EE K ++ HSE+LA F LI TA IRI KNLRVC DCH IK++S++TGR I+
Sbjct: 424 VNEETKAMWVCGHSERLATVFSLIHTAAGMPIRITKNLRVCVDCHSWIKIVSRVTGRVIV 483
Query: 584 VRDNNRFHCFIEGSCSCKDFW 604
+RD NRFH F EG+CSC D+W
Sbjct: 484 LRDTNRFHHFKEGACSCNDYW 504
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 188/354 (53%), Gaps = 7/354 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M G+ N + A+ Y M P NF F LKACA + +G H+ +VK+
Sbjct: 1 MAIGYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSS 60
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D+ V LL LY C + LKVFD +P++NV SW ++ISG++ E L EA+++FR
Sbjct: 61 EGPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFR 120
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+ ++ +L C ++ L + K IH + ++ + +V V SLVD+Y KCG
Sbjct: 121 RMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCG 180
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ RR+FD M KD+ SW++M+ GYA NG+ + A+D+F M ++P+ T + +LS
Sbjct: 181 VVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLS 240
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDKDQ 298
C+ G E G ME +F +P L L+DM + GR+ A V + M K
Sbjct: 241 GCSHAGLTEDGQKLFHRMEM-DFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTS 299
Query: 299 -VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVD 350
+W ++++ ++ V +A + +L + ++P N +V L +AG+ D
Sbjct: 300 GSIWGSLLNSCRLHNEVPLAEAIANRLFE--LEPYNPGNYVMLSNIYANAGMWD 351
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 2/225 (0%)
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
M GY+ NGF +EAL ++ M ++P + L ACA L L +G + + ++
Sbjct: 1 MAIGYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSS 60
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
+ V+ L+ +Y +C + KVF +M +++ WN+++SG + A VF
Sbjct: 61 EGPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFR 120
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
++++ G+ + T +L C + G++ + + + P + +VD+ +
Sbjct: 121 RMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKS-ARRPDVLVLNSLVDMYVKC 179
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
G +D L M + W +L G ++ +A + N++
Sbjct: 180 GVVDYGRRLFDGM-RSKDLTSWNTMLTGYAINGYMRVAMDLFNEM 223
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/612 (35%), Positives = 352/612 (57%), Gaps = 8/612 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHD--FQLGVRSHSLIVK 58
+I G+ ++ ++ M + G FT LK+C + G H VK
Sbjct: 182 LITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVK 241
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE----- 113
GLD D V T+LL++Y GYL DA+++F P++NVV + A+I+G+I +++
Sbjct: 242 QGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAY 301
Query: 114 EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLV 173
EA+ +F ++ +G+KP F+ ++ C + K IH ++ + + F+ ++L+
Sbjct: 302 EALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLI 361
Query: 174 DLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
+LY+ G+ E + F+ P+ DIVSW++MI GYA NG + AL +FY + KP+ +
Sbjct: 362 ELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEF 421
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
+ +LSACA + A G + + + ++ + I MYAK G + A F E+
Sbjct: 422 IITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEI 481
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
K+ D V W+ ++ + +G+ K A +F ++ GI PN TF+G+L C+H GLV+EG
Sbjct: 482 KNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGL 541
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+++ SM + + + ++H C+VDLL R+G+L +A I + + ++W LL+GCR+
Sbjct: 542 RYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRI 601
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
+K +HV +LI L+P S +YVLL NIY+ + A KIR +M D+GI+K G S
Sbjct: 602 YKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQS 661
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFV-PTTDHVLFDIEEEEKQYF 532
W+EV VH F+VGD SHP+S+ IY KL+ + K + G++ +V +E +
Sbjct: 662 WIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEVKGTLG 721
Query: 533 LACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
+ HSEKLA++FG+++ P +++ KNLRVC DCH +KLIS + REII+RD+ RFH
Sbjct: 722 VNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHH 781
Query: 593 FIEGSCSCKDFW 604
F EGSCSC D+W
Sbjct: 782 FKEGSCSCNDYW 793
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 198/421 (47%), Gaps = 9/421 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + AI ++ R F++ VL AC + DF LG H L + G
Sbjct: 81 LISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCG 140
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L F+ L+++Y C + A +F+ + + VSW ++I+GY G EE + +
Sbjct: 141 LGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLV 200
Query: 121 RLLHRGLKPDSFSIVRVLTAC-TQLGDL-STAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
++ H GL+ ++F++ L +C L ++ S K +HGY + G ++ V T+L+D+YAK
Sbjct: 201 KMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAK 260
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGY-ASNGFPK----EALDMFYNMQRENLKPEYY 233
G + A ++F P +++V +++MI G+ + K EAL +F MQR+ +KP +
Sbjct: 261 TGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDF 320
Query: 234 TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM 293
T ++ C + A E G + + ++ S+ +G+TLI++Y+ G K F
Sbjct: 321 TFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNST 380
Query: 294 KDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
D V W +++G + NG + A +F +L G +P+ +L C G
Sbjct: 381 PKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGE 440
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
Q + T I + + +SG LD A + + P+ + W ++
Sbjct: 441 QVHGYAVKTGIGTLAIVQ-NSQISMYAKSGNLDSAKITFEEIK-NPDVVSWSVMICSNAQ 498
Query: 414 H 414
H
Sbjct: 499 H 499
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 198/394 (50%), Gaps = 21/394 (5%)
Query: 49 GVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN 108
G +H+ ++K + F+ + LNLY G + +A K+FD + +++V+S+ +ISGY
Sbjct: 28 GKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYGG 87
Query: 109 EGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
G +AI +F LK D FS VL+AC Q+ D + K IHG G G+ VF+
Sbjct: 88 MGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFL 147
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
L+D+Y KC ++ AR +F+ E D VSW+S+I GYA G +E L + M L
Sbjct: 148 TNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGL 207
Query: 229 KPEYYTMVGVLSAC-ASLGAL-ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+ +T+ L +C +L + G + + + V+GT L+DMYAK G + A
Sbjct: 208 RLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDA 267
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKV-----AFGVFGQLEKCGIQPNGNTFVGLLC 341
++FR +++ V++NA+++G + A +F Q+++ GI+P+ TF ++
Sbjct: 268 IQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIK 327
Query: 342 GCTHAGLVDEGRQF------FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
C H + G+Q N S F + +IE Y + G ++ + S
Sbjct: 328 ICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLL-------GSTEDQLKCFNST 380
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
P + + + W ++AG + + + A + +L+A
Sbjct: 381 P-KLDIVSWTTMIAGYAQNGQFESALALFYELLA 413
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 146/289 (50%), Gaps = 16/289 (5%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
DS + +++ ++ G K H ++ + +F+ + ++LY+K G M A+++F
Sbjct: 8 DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA-----S 244
D+M E+ ++S++ +I GY GF +A+ +F + LK + ++ GVLSAC +
Sbjct: 68 DRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFA 127
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
LG + G+ + + FL+N LIDMY KC R+ A +F + D V WN++
Sbjct: 128 LGKVIHGLAIVCGLGQQVFLTN-----LLIDMYCKCERIDHARLLFESSDELDNVSWNSL 182
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC--THAGLVDEGRQFFN-SMSR 361
++G + G + + ++ G++ N T L C +V G+ ++ +
Sbjct: 183 ITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQ 242
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
L ++ ++D+ ++G L +A +L ++ P + N +++ A++AG
Sbjct: 243 GLDLDIVVG--TALLDMYAKTGYLGDAIQLFRTSPNQ-NVVMYNAMIAG 288
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/500 (40%), Positives = 320/500 (64%)
Query: 105 GYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR 164
GYI + ++A+ +F + G K D ++ AC L L K IH + +AG
Sbjct: 4 GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDS 63
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
++ V + ++D+Y KCG+M A VF+ + D V+W+SMI G NG +AL +++ M+
Sbjct: 64 DLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMR 123
Query: 225 RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMA 284
+ + P+ YT ++ A + + ALE G + + + + +S+P +GT+L+DMYAKCG +
Sbjct: 124 QSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIE 183
Query: 285 QACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCT 344
A ++F++M ++ +WNA++ GL+ +G + A +F ++ GI+P+ +F+G+L C+
Sbjct: 184 DAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 243
Query: 345 HAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVW 404
HAGL E ++ +SM + + P IEHY C+VD LGR+G + EA ++I++MP + +A +
Sbjct: 244 HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 303
Query: 405 GALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDK 464
ALL CR+ + + V +L ALEP++S YVLLSNIY+A+++W+D R MM K
Sbjct: 304 RALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRK 363
Query: 465 GIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDI 524
++K G SW++V ++H F+V D SHP ++ IY K++E+ ++ G+VP T+ VL D+
Sbjct: 364 NVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDV 423
Query: 525 EEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIV 584
E+EEK+ L HSEKLA+A+GLI+T IR+ KNLRVCGDCH AIK ISK+ REI++
Sbjct: 424 EDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVL 483
Query: 585 RDNNRFHCFIEGSCSCKDFW 604
RD NRFH F +G CSC D+W
Sbjct: 484 RDANRFHHFRDGVCSCGDYW 503
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 175/329 (53%), Gaps = 8/329 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ G++ + + A+E ++ + G T KAC G + H+ +KAG
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D D V + +L++Y+ CG + +A VF+ I + V+WT++ISG ++ GN ++A+ ++
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ + PD ++ ++ A + + L + +H V + + FV TSLVD+YAKCG
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+E A R+F +M ++I W++M+ G A +G +EA+++F +M+ ++P+ + +G+LS
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240
Query: 241 ACASLGALELGVWASSFMER--NEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK 296
AC+ G L A ++ N++ P + + L+D + G + +A KV M K
Sbjct: 241 ACSHAG---LTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFK 297
Query: 297 DQVVWN-AVVSGLSMNGYVKVAFGVFGQL 324
N A++ + G V+ V +L
Sbjct: 298 ASASINRALLGACRIQGDVEXGKRVAARL 326
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 6/268 (2%)
Query: 203 MIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
M+ GY K+AL++F + + K + T+ AC L L+ G + +
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
F S+ + + ++DMY KCG M A VF + D V W +++SG NG A ++
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT-PMIEHYGCMVDLLGR 381
++ + + P+ TF L+ + +++GRQ ++ ++ ++ P + +VD+ +
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAK 178
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEPWNSGNYV 439
G +++A+ L K M + N +W A+L G H + A ++ + + +EP
Sbjct: 179 CGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIG 237
Query: 440 LLSNIYSASHKWNDAAKIRSMMGDKGIQ 467
+LS A + SM D GI+
Sbjct: 238 ILSACSHAGLTSEAYEYLHSMPNDYGIE 265
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/614 (37%), Positives = 349/614 (56%), Gaps = 50/614 (8%)
Query: 34 PFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY---LADALKVFDD 90
PF + C + + HS I++ GL + L+N L ALK+FD
Sbjct: 26 PFHFEKCQSMSQLR---QYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDS 82
Query: 91 IPDKNVVSWTAIISGYINEGNL--EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLS 148
IP + + II G+++ L + ++ +L + P++F+ +L AC ++
Sbjct: 83 IPQPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKI---Q 139
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA 208
IH ++ + G G + SL+ +Y +E+ARRVF +P D VSW+S+I GY+
Sbjct: 140 HGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYS 199
Query: 209 SNGFPKEALDMFYNMQREN--------------------------LKPE------YYTMV 236
G EA +F M ++N +K E +
Sbjct: 200 KWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVAT 259
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
+LSAC LGAL+ G W +++RN + L T ++DMY KCG + +A +VF +
Sbjct: 260 TMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLP 319
Query: 297 DQVV--WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+ + WN ++ GL+M+G + A +F ++E+ + P+ TF+ LL C H+GLV+EGR
Sbjct: 320 CRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRN 379
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+F+ M RV+ + P +EH+GCMVDLLGR+G + EA +LI MP+ P+ V G LL C+ H
Sbjct: 380 YFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKH 439
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
+ +L E + ++I LEP NSG YVLL+N+Y+ + KW DAAK+R +M D+G++K G S
Sbjct: 440 RNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSM 499
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVL----FDIEEEEKQ 530
+E+ G VHEF+ G+ +HP ++++++K+ E+ LK+ G+V T+ VL FD EEE+ +
Sbjct: 500 IELQGTVHEFIAGERNHPQAKELHAKVYEMLEHLKSVGYVADTNGVLHGHDFD-EEEDGE 558
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L HSEKLA+AFGL T P + +RI KNLR+C DCH A KLIS + REIIVRD RF
Sbjct: 559 NPLYYHSEKLAIAFGLSRTKPGETLRILKNLRICEDCHHACKLISTVFDREIIVRDRTRF 618
Query: 591 HCFIEGSCSCKDFW 604
H F G CSC+D+W
Sbjct: 619 HRFKMGQCSCQDYW 632
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 162/331 (48%), Gaps = 42/331 (12%)
Query: 1 MIRGFVSNDCF--QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
+I+GF+ + + Y+ M LP NFTFP +L AC + Q G++ H+ + K
Sbjct: 94 IIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRK---IQHGMQIHAHLFK 150
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
G SL+++YV L +A +VF IP + VSWT++ISGY G ++EA +
Sbjct: 151 FGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTI 210
Query: 119 FRRLLHRGLKP--------------------------------DSFSIVRVLTACTQLGD 146
F+ + + D F +L+ACT LG
Sbjct: 211 FQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGA 270
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE--KDIVSWSSMI 204
L KWIH Y+ G + + T++VD+Y KCG +EKA +VF +P + I SW+ MI
Sbjct: 271 LDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMI 330
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G A +G + A+ +F M+R+ + P+ T + +L+ACA G +E G S+M R +
Sbjct: 331 GGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIR-VYG 389
Query: 265 SNPVLGT--TLIDMYAKCGRMAQACKVFREM 293
P + ++D+ + G + +A K+ EM
Sbjct: 390 IEPRMEHFGCMVDLLGRAGMVPEARKLIDEM 420
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/557 (39%), Positives = 329/557 (59%), Gaps = 31/557 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ ++D A+ + M G P FT PFVLKAC + + V H L +K G
Sbjct: 59 LIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLG 118
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV+ +L+ +YV CG + A K+FDDI DK +VSW ++I GY + GN +EA +FR
Sbjct: 119 IGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFR 178
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++PD F+ V +L+ C+Q DL +++H + G ++ V +LVD+YAKCG
Sbjct: 179 KMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCG 238
Query: 181 NM-------------------------------EKARRVFDQMPEKDIVSWSSMIQGYAS 209
N+ E AR++FDQMP K++VSW+SMI Y
Sbjct: 239 NLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLR 298
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
G +EALD+F M+ + P+ T+V +L+AC+ LG L +G +++ N+ L
Sbjct: 299 EGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTL 358
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
+LIDMYAKCG + A +F EM K+ V WN ++ L+++G A +F +++ G
Sbjct: 359 YNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGT 418
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
P+ T GLL C+H+GLVD G +F+ M ++ + IEHY CMVDLLGR G L EA
Sbjct: 419 LPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAI 478
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
ELI MPM+P+ +VWGALL CR+H ++ + +L QL+ LEP + G YVL+SNIY +
Sbjct: 479 ELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQ 538
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
+W D KIR +M D+GI+K R S +E+DG ++EF+V D H +S IY+ LD+L L+
Sbjct: 539 RWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLR 598
Query: 510 AAGFVPTTDHVLFDIEE 526
+AG++ V F+ EE
Sbjct: 599 SAGYLCNISSVFFEAEE 615
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 190/398 (47%), Gaps = 41/398 (10%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYV--HCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
H+ I+ GL + L++ G L A ++FD IP N + ++I GY N
Sbjct: 8 HAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSD 67
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+ +A+ +FRR++ GL P+ F++ VL AC A +HG + G G VFV
Sbjct: 68 DPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQN 127
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+L+ +Y CG + AR++FD + +K +VSW+SMI GYA G KEA +F M+ ++P
Sbjct: 128 ALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEP 187
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ +T V +LS C+ L+LG + +E + ++ L+DMYAKCG + A +F
Sbjct: 188 DGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIF 247
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ--------------------------- 323
++K+ V W +++S + +G ++VA +F Q
Sbjct: 248 DRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALD 307
Query: 324 ----LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN---SMSRVFSLTPMIEHYGCMV 376
+ + P+ T V +L C+ G + G++ N S + +T Y ++
Sbjct: 308 LFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTL----YNSLI 363
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
D+ + G + A ++ MP + N + W ++ LH
Sbjct: 364 DMYAKCGPVVTALDIFLEMPGK-NLVSWNVIIGALALH 400
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 142/288 (49%), Gaps = 14/288 (4%)
Query: 153 IHGYVNEA---GKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+HG NE GK ++ VD G+++ A+R+FDQ+P+ + ++S+I+GY++
Sbjct: 13 LHGLTNETLTLGK----LISFCAVD---DAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSN 65
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+ P +A+ +F M L P +T+ VL AC A V + S +
Sbjct: 66 SDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFV 125
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
LI +Y CG + A K+F ++ DK V WN+++ G + G K AF +F ++ + G+
Sbjct: 126 QNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGM 185
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+P+G TFV LL C+ + +D GR + + + + I +VD+ + G L A
Sbjct: 186 EPDGFTFVNLLSVCSQSRDLDLGR-YVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQ 244
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA--LEPWNS 435
+ E N + W ++++ H ++A + +Q+ + WNS
Sbjct: 245 AIFDR-TQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNS 291
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/607 (38%), Positives = 348/607 (57%), Gaps = 42/607 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++RG+ +D +++ + M +GF+ P +F+F FV+KA + G + H +K
Sbjct: 68 LVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKH 127
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL+ FV T+L+ +Y CG + A KVFD++ N+V+W A+I+ ++ A +F
Sbjct: 128 GLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIF 187
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++L R + W NV +A Y K
Sbjct: 188 DKMLVR----------------------NHTSW------------NVMLAG-----YIKA 208
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E A+R+F +MP +D VSWS+MI G A NG E+ F +QR + P ++ GVL
Sbjct: 209 GELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVL 268
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SAC+ G+ E G F+E+ + + LIDMY++CG + A VF M++K +
Sbjct: 269 SACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCI 328
Query: 300 V-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W ++++GL+M+G + A +F ++ G+ P+G +F+ LL C+HAGL++EG +F+
Sbjct: 329 VSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSE 388
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M RV+ + P IEHYGCMVDL GRSG+L +A++ I MP+ P AIVW LL C H +
Sbjct: 389 MKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIE 448
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
LAE V +L L+P NSG+ VLLSN Y+ + KW D A IR M + I+K S VEV
Sbjct: 449 LAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVG 508
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEEKQYFLACHS 537
+++F G+ + + + KL E+ +LK AG+ P L+D+EEEEK+ ++ HS
Sbjct: 509 KTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHS 568
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EKLALAF L + IRI KNLR+C DCH +KL SK+ G EI+VRD NRFH F +GS
Sbjct: 569 EKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGS 628
Query: 598 CSCKDFW 604
CSC+D+W
Sbjct: 629 CSCRDYW 635
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 146/360 (40%), Gaps = 69/360 (19%)
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD--LYAKCGNMEKARRVFDQM 192
+ +L +C L L+ IHG + G + + L+ + + ARR+
Sbjct: 1 LSLLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCF 57
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK-PEYYTMVGVLSACASLGALELG 251
PE D ++++++GY+ + P ++ +F M R+ P+ ++ V+ A + +L G
Sbjct: 58 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 117
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG---- 307
++ S+ +GTTLI MY CG + A KVF EM + V WNAV++
Sbjct: 118 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 177
Query: 308 ----------------------LSMNGYVKV----------------------------- 316
+ + GY+K
Sbjct: 178 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 237
Query: 317 -------AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
+F F +L++ G+ PN + G+L C+ +G + G+ + + + ++
Sbjct: 238 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA-GYSWIV 296
Query: 370 EHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
++D+ R G + A + + M + + W +++AG +H + + A + N++ A
Sbjct: 297 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 356
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/543 (41%), Positives = 331/543 (60%), Gaps = 10/543 (1%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D +LL+ + G A ++F +P ++VVSW ++SG G +EEA +F +
Sbjct: 128 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 187
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
R S++ + AC++ D+S A+ W + N KG + + T++V Y GN+
Sbjct: 188 VR--NSVSWNAMVSGFACSR--DMSAAEEW---FRNAPEKG-DAVLWTAMVSGYMDIGNV 239
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSA 241
KA F+ MP +++VSW++++ GY N +AL +F M RE N++P T+ VL
Sbjct: 240 VKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLG 299
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C++L AL G + + N +GT+L+ MY KCG ++ ACK+F EM +D V W
Sbjct: 300 CSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAW 359
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA++SG + +G K A +F +++ G++PN TFV +L C H GL D G + F M
Sbjct: 360 NAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQE 419
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
++ + P ++HY CMVDLL R+G+L+ A +LI+SMP EP+ +G LLA CR++K + AE
Sbjct: 420 LYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAE 479
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
+LI +P ++G YV L+NIY+ +++W+D +++R M D + K G SW+E+ GV+
Sbjct: 480 LAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVM 539
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
HEF D HP I+ KL +LA ++KA G+VP D VL D++E K L HSEKLA
Sbjct: 540 HEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLA 599
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
++FGLI+TAP +RI KNLRVCGDCH A K+ISKI REII+RD RFH F G CSC
Sbjct: 600 ISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCG 659
Query: 602 DFW 604
D+W
Sbjct: 660 DYW 662
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+V N A+ + +M R P T VL C+ G + H +K
Sbjct: 260 VVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKL 319
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L + V TSL+++Y CG L+ A K+F ++ ++VV+W A+ISGY G+ +EAIN+F
Sbjct: 320 PLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLF 379
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLG--DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
R+ G++P+ + V VLTAC G D + G G V + +VDL
Sbjct: 380 ERMKDEGVEPNWITFVAVLTACIHTGLCDFGI-RCFEGMQELYGIEPRVDHYSCMVDLLC 438
Query: 178 KCGNMEKARRVFDQMP 193
+ G +E+A + MP
Sbjct: 439 RAGKLERAVDLIRSMP 454
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 118/313 (37%), Gaps = 61/313 (19%)
Query: 160 AGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA----------- 208
+ + ++T V + G++ A F P K +++ ++ GYA
Sbjct: 60 SARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARH 119
Query: 209 ---------------------SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA---- 243
++G A +F +M ++ + TMV LS
Sbjct: 120 LFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVV-SWNTMVSGLSKSGAVEE 178
Query: 244 --------------SLGALELGVWASSFMERNE--FLSNP-----VLGTTLIDMYAKCGR 282
S A+ G S M E F + P VL T ++ Y G
Sbjct: 179 AKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGN 238
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQPNGNTFVGLLC 341
+ +A + F M ++ V WNAVV+G N + A +F + + +QPN +T +L
Sbjct: 239 VVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLL 298
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
GC++ + G+Q ++ L+ + +V + + G L A +L M +
Sbjct: 299 GCSNLSALGFGKQIHQWCMKL-PLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR-DV 356
Query: 402 IVWGALLAGCRLH 414
+ W A+++G H
Sbjct: 357 VAWNAMISGYAQH 369
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/525 (40%), Positives = 317/525 (60%), Gaps = 5/525 (0%)
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTA 140
L+ A +FD I + ++ II + + + + G+ PD F+ VL A
Sbjct: 38 LSYARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLFSKMAM-AGVSPDHFTFPFVLKA 96
Query: 141 CTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSW 200
C +L T +H + + G +V+V L+ Y CG ++ A +VF++MPE+D+VSW
Sbjct: 97 CARL---QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSW 153
Query: 201 SSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
SSMI +A NGF EAL +F MQ +KP+ ++ V+SA + LG LELG W F+
Sbjct: 154 SSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFIS 213
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
RN LGT L+DM+++CG + ++ +VF EM +++ + W A+++GL+++G A
Sbjct: 214 RNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALR 273
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F ++ G QP+ TF G+L C+H GLV EG F S+ + + P+ EHYGCMVDLL
Sbjct: 274 MFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLL 333
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
GR+G L+EA + + MP+ PN+I+W LL C H +LAE V ++ L+ ++ G+YV
Sbjct: 334 GRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYV 393
Query: 440 LLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYS 499
LLSN+Y +W + A +R+ M +K I K GCS + V+ ++HEF+ GDN+HP E I
Sbjct: 394 LLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIRE 453
Query: 500 KLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAK 559
L + LK G+ P +VLFDIEEEEK+ L HSEKLA+AF L+ IR+ K
Sbjct: 454 FLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMK 513
Query: 560 NLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
NLR+C DCH +K S + REII+RD NRFH F +GSCSC+D+W
Sbjct: 514 NLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 185/301 (61%), Gaps = 8/301 (2%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M G P +FTFPFVLKACAR Q G+ HSL+ K G D D +V+ L++ Y CG+
Sbjct: 78 MAMAGVSPDHFTFPFVLKACAR---LQTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGF 134
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG-LKPDSFSIVRVLT 139
L ALKVF+++P++++VSW+++I+ + G EA+ +F+R+ G +KPD ++ V++
Sbjct: 135 LDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVS 194
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
A + LGDL KWI G+++ G V + T+LVD++++CG +E++ RVFD+M E+++++
Sbjct: 195 AISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLT 254
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W+++I G A +G EAL MFY M+ +P++ T GVL AC+ G + G W
Sbjct: 255 WTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEG-WHVFESI 313
Query: 260 RNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKV 316
RNE+ P+ ++D+ + G + +ACK M + + ++W ++ + Y+++
Sbjct: 314 RNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIEL 373
Query: 317 A 317
A
Sbjct: 374 A 374
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 5/208 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI F N A+ + M+ G + P V+ A + D +LG I +
Sbjct: 156 MIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRN 215
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL+ + T+L++++ CG + ++++VFD++ ++NV++WTA+I+G G EA+ MF
Sbjct: 216 GLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMF 275
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW--IHGYVNEAGKGRNVFVATSLVDLYA 177
+ + G +PD + VL AC+ G L + W NE G +VDL
Sbjct: 276 YEMRNHGFQPDHVTFTGVLVACSH-GGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLG 334
Query: 178 KCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ G + +A + D MP + + W +++
Sbjct: 335 RAGLLNEACKFVDGMPIRPNSIIWRTLL 362
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/608 (35%), Positives = 360/608 (59%), Gaps = 8/608 (1%)
Query: 4 GFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC 63
G++ + ++ M G P FTF LKAC + G++ H + VK+G +
Sbjct: 79 GYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEW 138
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
V + +++Y CG + A +VF+ +P +N+VSW A+I+G+ +EGN +++ +F+R+
Sbjct: 139 VSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQ 198
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG---KGRNVFVATSLVDLYAKCG 180
+G PD F+ L AC LG + IH + G RN+ +A+++VDLYAKCG
Sbjct: 199 GQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI-IASAIVDLYAKCG 257
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ +A++VFD++ +K+++SWS++IQG+A G EA+D+F ++ + + + ++
Sbjct: 258 YLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMG 317
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A L +E G ++ + + + ++IDMY KCG +A ++F EM+ ++ V
Sbjct: 318 VFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVS 377
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G +G + A +F +++ GI+ + ++ LL C+H+GL+ E +++F+ +
Sbjct: 378 WTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLC 437
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ P IEHY CMVD+LGR+GQL EA LI++M ++PN +W LL+ CR+H ++
Sbjct: 438 NNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIG 497
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
V L ++ N NYV++SNIY+ + W + ++R ++ KG++K G SWVE++
Sbjct: 498 REVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKE 557
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F GD++HPL+EKI+ L E+ ++K G+ L D+EEE K+ L HSEK
Sbjct: 558 IHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEK 617
Query: 540 LALAFGLITTAPKD---VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
LA+ L+ + VIR+ KNLRVCGDCHE IK +SKI + +VRD NRFH F +G
Sbjct: 618 LAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDG 677
Query: 597 SCSCKDFW 604
CSC D+W
Sbjct: 678 LCSCGDYW 685
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 210/394 (53%), Gaps = 4/394 (1%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+ C++ F G++ H+ V G D + L+++Y C + A VFD + ++N
Sbjct: 10 LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERN 69
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
VVSWTA++ GY+ EGN + ++ + + + G+KP+ F+ L AC LG + IHG
Sbjct: 70 VVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHG 129
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
++G V + +D+Y+KCG + A +VF++MP +++VSW++MI G+ G ++
Sbjct: 130 MCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRK 189
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA-SSFMERNEFLS-NPVLGTTL 273
+L +F MQ + P+ +T L AC +LGA+ G +S + R +S ++ + +
Sbjct: 190 SLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAI 249
Query: 274 IDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNG 333
+D+YAKCG + +A KVF ++ K+ + W+A++ G + G + A +F QL + +G
Sbjct: 250 VDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDG 309
Query: 334 NTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
++ LV++G+Q + +V S I ++D+ + G +EA L
Sbjct: 310 FVLSIMMGVFADLALVEQGKQMHCYILKVPSGLD-ISVANSIIDMYLKCGLTEEAERLFS 368
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
M + N + W ++ G H + A H+ N++
Sbjct: 369 EMQVR-NVVSWTVMITGYGKHGLGEKAIHLFNRM 401
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 175/321 (54%), Gaps = 4/321 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G + ++ + M+ +G +P FTF LKAC + G + H+ ++ G
Sbjct: 177 MIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRG 236
Query: 61 --LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINM 118
+ + +++++LY CGYL +A KVFD I KN++SW+A+I G+ EGNL EA+++
Sbjct: 237 FPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDL 296
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
FR+L D F + ++ L + K +H Y+ + G ++ VA S++D+Y K
Sbjct: 297 FRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLK 356
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG E+A R+F +M +++VSW+ MI GY +G ++A+ +F MQ + ++ + + +
Sbjct: 357 CGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLAL 416
Query: 239 LSACASLGAL-ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK- 296
LSAC+ G + E + S ++ N ++D+ + G++ +A + MK K
Sbjct: 417 LSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKP 476
Query: 297 DQVVWNAVVSGLSMNGYVKVA 317
++ +W ++S ++G +++
Sbjct: 477 NEGIWQTLLSACRVHGNLEIG 497
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 143/278 (51%), Gaps = 2/278 (0%)
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+ ++L C++ G +H G G ++ + L+D+Y KC ++ A VFD+M
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
E+++VSW++++ GY G K +L + M +KP +T L AC +LG +E G+
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
++ F V+G IDMY+KCGR+ A +VF +M ++ V WNA+++G + G
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHY 372
+ + +F +++ G P+ TF L C G + G Q S+ +R F ++
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIA 246
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+VDL + G L EA ++ + + N I W AL+ G
Sbjct: 247 SAIVDLYAKCGYLFEAQKVFDRIE-QKNLISWSALIQG 283
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 129/297 (43%), Gaps = 36/297 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I+GF A++ + +R F ++ A + G + H I+K
Sbjct: 280 LIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVP 339
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V S++++Y+ CG +A ++F ++ +NVVSWT +I+GY G E+AI++F
Sbjct: 340 SGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFN 399
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDL-STAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ G++ D + + +L+AC+ G + + ++ N N+ +VD+ +
Sbjct: 400 RMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRA 459
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +++A+ + + M LKP +L
Sbjct: 460 GQLKEAKNLIENMK----------------------------------LKPNEGIWQTLL 485
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
SAC G LE+G + R + NPV + ++YA+ G + +V + +K K
Sbjct: 486 SACRVHGNLEIGREVGEILFRMD-TDNPVNYVMMSNIYAEAGYWKECERVRKLVKAK 541
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
E + +L C+ G + G+ + F + ++ LIDMY KC R+ AC V
Sbjct: 2 SERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSV 61
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F M +++ V W A++ G G K + + ++ G++PN TF L C G+V
Sbjct: 62 FDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVV 121
Query: 350 DEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
+ G Q + F ++ + +D+ + G++ A ++ MP N + W A++
Sbjct: 122 ENGMQIHGMCVKSGFEWVSVVGN--ATIDMYSKCGRIGMAEQVFNKMPFR-NLVSWNAMI 178
Query: 409 AG 410
AG
Sbjct: 179 AG 180
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/558 (38%), Positives = 333/558 (59%), Gaps = 39/558 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF +D F+ A++++ M + F+ +++F L AC+R D +LG + H LI K+
Sbjct: 127 MIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSK 186
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D F+ + L++ Y CG + A +VFD + +KNVVSW +I+ Y G EA+ F
Sbjct: 187 YSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFG 246
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN-VFVATSLVDLYAKC 179
R+ G KPD ++ V++AC L IH V ++ K RN + + +LVD+YAKC
Sbjct: 247 RMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKC 306
Query: 180 GNMEKARRVFDQMP-------------------------------EKDIVSWSSMIQGYA 208
G + +AR VFD+MP +KDIVSW+++I GY
Sbjct: 307 GRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYT 366
Query: 209 SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL---- 264
NG +EAL +F ++RE++ P +YT +L+A A+L LELG A S + ++ F
Sbjct: 367 QNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSG 426
Query: 265 --SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
+ +G +LIDMY KCG + + +VF M +KD V WN ++ G + NGY A +F
Sbjct: 427 EEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQ 486
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
++ + G +P+ T +G LC C+HAGLV+EGR++F SM++ L P+ +HY CMVDLLGR+
Sbjct: 487 KMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRA 546
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLS 442
G L+EA +LI+SMP +P+A+VW +LL+ C++H+ L ++V ++ ++P +SG YVLL+
Sbjct: 547 GCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLA 606
Query: 443 NIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLD 502
N+YS +W DA +R +M +G+ K GCSW+++ VH F+V D HP ++IYS L
Sbjct: 607 NMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILK 666
Query: 503 ELATKLKAAGFVP-TTDH 519
L ++ AG+VP +DH
Sbjct: 667 LLTKHMRQAGYVPDASDH 684
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 216/454 (47%), Gaps = 71/454 (15%)
Query: 26 FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE-FVKTSLLNLYVHCGYLADA 84
F + F +L C + + H +++ C+E F++ L+++Y CGYL A
Sbjct: 20 FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPF-CEEVFIQNRLIDVYGKCGYLDYA 78
Query: 85 LKVFDD-------------------------------IPDKNVVSWTAIISGYINEGNLE 113
KVFD +P+K+ SW ++I+G+ E
Sbjct: 79 RKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFE 138
Query: 114 EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLV 173
EA++ F R+ + +S L+AC++L DL IHG ++++ +VF+ + L+
Sbjct: 139 EALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLI 198
Query: 174 DLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYY 233
D Y+KCG + ARRVFD M EK++VSW+ +I Y NG EAL+ F M KP+
Sbjct: 199 DFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEV 258
Query: 234 TMVGVLSACASLGALELGVWA-SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
T+ V+SACA+L A + GV + ++ ++F ++ +LG L+DMYAKCGR+ +A VF
Sbjct: 259 TLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDR 318
Query: 293 M-------------------------------KDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
M K KD V WNA+++G + NG + A G+F
Sbjct: 319 MPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLF 378
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR-----VFSLTPMIEHYGCMV 376
L++ + P TF LL + ++ GRQ + + + P I ++
Sbjct: 379 RMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLI 438
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
D+ + G ++E + ++M +E + + W ++ G
Sbjct: 439 DMYMKCGSVEEGLRVFENM-VEKDHVSWNTMIIG 471
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/607 (35%), Positives = 343/607 (56%), Gaps = 12/607 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + A+ ++ M G P + + +LK+ +G + H+ +++AG
Sbjct: 153 MISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAG 212
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + ++T ++N+YV CG+L A +VFD + K V+WT ++ GY G +A+ +F
Sbjct: 213 LCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFV 272
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L+ G++ DSF VL AC L +L K IH V + G V V T LVD Y KC
Sbjct: 273 DLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCS 332
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVL 239
+ E A R F ++ E + VSWS++I GY +EA+ F +++ +N + +T +
Sbjct: 333 SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIF 392
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC+ L +G + + + + + LI MY+KCG + A +VF M + D V
Sbjct: 393 QACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIV 452
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W A +SG + G A +F ++ CG++PN TF+ +L C+HAGLV++G+ + ++M
Sbjct: 453 AWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTM 512
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R +++ P I+HY CM+D+ RSG LDEA +K+MP EP+A+ W L+GC HK +L
Sbjct: 513 LRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLEL 572
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ +L L+P ++ YVL N+Y+ + KW +AA++ +M ++ ++K CSW++ G
Sbjct: 573 GKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKG 632
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F+VGD HP S++IY KL E GF+ +F E++ L HSE+
Sbjct: 633 KIHRFIVGDKHHPQSQEIYEKLKEF------DGFMEGD---MFQCSMTERREQLLDHSER 683
Query: 540 LALAFGLITT--APKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
LA+AFGLI+ + I++ KNLR C DCHE K +S +TG EI++RD+ RFH F EG
Sbjct: 684 LAIAFGLISVNGNARAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGK 743
Query: 598 CSCKDFW 604
CSC D+W
Sbjct: 744 CSCNDYW 750
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 197/400 (49%), Gaps = 7/400 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A EF+ M G + +++ + +AC G H+ + + ++ +L
Sbjct: 65 AFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQ 124
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG L DA K+FD++ D N VS T +IS Y +G L++A+ +F R+L G KP S
Sbjct: 125 MYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSM 184
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP 193
+L + L + IH +V AG N + T +V++Y KCG + A+RVFDQM
Sbjct: 185 YTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMA 244
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVW 253
K V+W+ ++ GY G ++AL +F ++ E ++ + + VL ACASL L G
Sbjct: 245 VKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQ 304
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGY 313
+ + + +GT L+D Y KC AC+ F+E+++ + V W+A++SG
Sbjct: 305 IHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQ 364
Query: 314 VKVAFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ A F L K + N T+ + C+ + G Q + + + Y
Sbjct: 365 FEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVH---ADAIKRSLIGSQY 421
Query: 373 G--CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
G ++ + + G LD+AHE+ +SM P+ + W A ++G
Sbjct: 422 GESALITMYSKCGCLDDAHEVFESMD-NPDIVAWTAFISG 460
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 146/307 (47%), Gaps = 3/307 (0%)
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
G L EA F+ + G+ +S + AC +L LS + +H + + +V +
Sbjct: 60 GKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQ 119
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
++ +Y +CG++E A ++FD+M + + VS ++MI YA G +A+ +F M K
Sbjct: 120 NCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDK 179
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKV 289
P +L + + AL++G + + R SN + T +++MY KCG + A +V
Sbjct: 180 PPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRV 239
Query: 290 FREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLV 349
F +M K V W ++ G + G + A +F L G++ + F +L C +
Sbjct: 240 FDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEEL 299
Query: 350 DEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
G+Q ++++ L + +VD + + A + + EPN + W A+++
Sbjct: 300 RFGKQIHACVAKL-GLECEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWSAIIS 357
Query: 410 G-CRLHK 415
G C++ +
Sbjct: 358 GYCQMSQ 364
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/625 (36%), Positives = 349/625 (55%), Gaps = 46/625 (7%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC-- 78
M+ EG P F L ACA + G + HS +V +GL + + SL+N+Y C
Sbjct: 1 MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQD 60
Query: 79 -----------------------------GYLADALKVFDDIPDKNVVSWTAIISGYINE 109
G + AL VF+ +P K+ VSW A+I+ +
Sbjct: 61 VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGN 120
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN-VFV 168
++A+ +F + GL+ + F+++ +L AC L DL A+ IH G G N V
Sbjct: 121 SKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAV 180
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS--NGFPKEALDMFYNMQRE 226
S+V++YA+CG++ ++ FD + EK +V+WS M+ YA +G + A F M+ E
Sbjct: 181 GNSVVNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAE 240
Query: 227 NLKPEYYTMVGVLSACASLGALELG------VWASSFMERNEFLSNPVLGTTLIDMYAKC 280
+KP T V L ACA++ LE G AS F+E ++ VLG T+I+MY KC
Sbjct: 241 GIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVE-----TSLVLGNTIINMYGKC 295
Query: 281 GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
G + A VF +M +K + WN+++ + NG+ A ++ G P+ T V +L
Sbjct: 296 GSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSIL 355
Query: 341 CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM-EP 399
G +HAGL++ G + F S + L P C+VDLL R G LD A ELI + P +
Sbjct: 356 YGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQA 415
Query: 400 NAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRS 459
+ I W LLA C+ + ++ LEP +SG++V+L+N+Y++ +W+DA++IR
Sbjct: 416 DTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRK 475
Query: 460 MMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDH 519
MM ++K GCSW+E+ G VHEF+ G++ HP +I +L++L +++ AG+VP T +
Sbjct: 476 MMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEELEKLTLRMREAGYVPDTTN 535
Query: 520 VLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITG 579
V+ D+EE +K+ L+ HSE+LA+ FGL++T P + IR+ KNLRVC DCH A K+IS + G
Sbjct: 536 VVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVG 595
Query: 580 REIIVRDNNRFHCFIEGSCSCKDFW 604
REI+VRD++RFH F G CSC DFW
Sbjct: 596 REIVVRDSSRFHHFKHGQCSCGDFW 620
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 144/292 (49%), Gaps = 17/292 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I V N FQ A+E ++ M EG FT +L+AC D +L + H+ G
Sbjct: 113 VINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGG 172
Query: 61 LDCDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYIN--EGNLEEAIN 117
+ V S++N+Y CG L D K FD + +K +V+W+ +++ Y +G+ A
Sbjct: 173 FGGNSTAVGNSVVNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFK 232
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLV---- 173
F+ + G+KP + V L AC + L + +H +G FV TSLV
Sbjct: 233 FFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASG-----FVETSLVLGNT 287
Query: 174 --DLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
++Y KCG+ A+ VFDQMPEK ++SW+S+I YA NG EAL M + P+
Sbjct: 288 IINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPD 347
Query: 232 YYTMVGVLSACASLGALELGV--WASSFMERNEFLSNPVLGTTLIDMYAKCG 281
T V +L + G LE GV + SS + S+ L L+D+ A+ G
Sbjct: 348 SGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQL-KCLVDLLARKG 398
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/543 (41%), Positives = 331/543 (60%), Gaps = 10/543 (1%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
D +LL+ + G A ++F +P ++VVSW ++SG G +EEA +F +
Sbjct: 79 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 138
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKCGNM 182
R S++ + AC++ D+S A+ W + N KG + + T++V Y GN+
Sbjct: 139 VR--NSVSWNAMVSGFACSR--DMSAAEEW---FRNAPEKG-DAVLWTAMVSGYMDIGNV 190
Query: 183 EKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSA 241
KA F+ MP +++VSW++++ GY N +AL +F M RE N++P T+ VL
Sbjct: 191 VKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLG 250
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
C++L AL G + + N +GT+L+ MY KCG ++ ACK+F EM +D V W
Sbjct: 251 CSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAW 310
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
NA++SG + +G K A +F +++ G++PN TFV +L C H GL D G + F M
Sbjct: 311 NAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQE 370
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAE 421
++ + P ++HY CMVDLL R+G+L+ A +LI+SMP EP+ +G LLA CR++K + AE
Sbjct: 371 LYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAE 430
Query: 422 HVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVV 481
+LI +P ++G YV L+NIY+ +++W+D +++R M D + K G SW+E+ GV+
Sbjct: 431 LAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVM 490
Query: 482 HEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLA 541
HEF D HP I+ KL +LA ++KA G+VP D VL D++E K L HSEKLA
Sbjct: 491 HEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLA 550
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
++FGLI+TAP +RI KNLRVCGDCH A K+ISKI REII+RD RFH F G CSC
Sbjct: 551 ISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCG 610
Query: 602 DFW 604
D+W
Sbjct: 611 DYW 613
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+V N A+ + +M R P T VL C+ G + H +K
Sbjct: 211 VVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKL 270
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
L + V TSL+++Y CG L+ A K+F ++ ++VV+W A+ISGY G+ +EAIN+F
Sbjct: 271 PLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLF 330
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLG--DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
R+ G++P+ + V VLTAC G D + G G V + +VDL
Sbjct: 331 ERMKDEGVEPNWITFVAVLTACIHTGLCDFGI-RCFEGMQELYGIEPRVDHYSCMVDLLC 389
Query: 178 KCGNMEKARRVFDQMP 193
+ G +E+A + MP
Sbjct: 390 RAGKLERAVDLIRSMP 405
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 118/313 (37%), Gaps = 61/313 (19%)
Query: 160 AGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA----------- 208
+ + ++T V + G++ A F P K +++ ++ GYA
Sbjct: 11 SARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARH 70
Query: 209 ---------------------SNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA---- 243
++G A +F +M ++ + TMV LS
Sbjct: 71 LFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVV-SWNTMVSGLSKSGAVEE 129
Query: 244 --------------SLGALELGVWASSFMERNE--FLSNP-----VLGTTLIDMYAKCGR 282
S A+ G S M E F + P VL T ++ Y G
Sbjct: 130 AKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGN 189
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQPNGNTFVGLLC 341
+ +A + F M ++ V WNAVV+G N + A +F + + +QPN +T +L
Sbjct: 190 VVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLL 249
Query: 342 GCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNA 401
GC++ + G+Q ++ L+ + +V + + G L A +L M +
Sbjct: 250 GCSNLSALGFGKQIHQWCMKL-PLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR-DV 307
Query: 402 IVWGALLAGCRLH 414
+ W A+++G H
Sbjct: 308 VAWNAMISGYAQH 320
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/607 (38%), Positives = 348/607 (57%), Gaps = 42/607 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++RG+ +D +++ + M +GF+ P +F+F FV+KA + G + H +K
Sbjct: 76 LVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKH 135
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL+ FV T+L+ +Y CG + A KVFD++ N+V+W A+I+ ++ A +F
Sbjct: 136 GLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIF 195
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++L R + W NV +A Y K
Sbjct: 196 DKMLVR----------------------NHTSW------------NVMLAG-----YIKA 216
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E A+R+F +MP +D VSWS+MI G A NG E+ F +QR + P ++ GVL
Sbjct: 217 GELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVL 276
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SAC+ G+ E G F+E+ + + LIDMY++CG + A VF M++K +
Sbjct: 277 SACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCI 336
Query: 300 V-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W ++++GL+M+G + A +F ++ G+ P+G +F+ LL C+HAGL++EG +F+
Sbjct: 337 VSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSE 396
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M RV+ + P IEHYGCMVDL GRSG+L +A++ I MP+ P AIVW LL C H +
Sbjct: 397 MKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIE 456
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
LAE V +L L+P NSG+ VLLSN Y+ + KW D A IR M + I+K S VEV
Sbjct: 457 LAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVG 516
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEEKQYFLACHS 537
+++F G+ + + + KL E+ +LK AG+ P L+D+EEEEK+ ++ HS
Sbjct: 517 KTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHS 576
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EKLALAF L + IRI KNLR+C DCH +KL SK+ G EI+VRD NRFH F +GS
Sbjct: 577 EKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGS 636
Query: 598 CSCKDFW 604
CSC+D+W
Sbjct: 637 CSCRDYW 643
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 146/359 (40%), Gaps = 71/359 (19%)
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG---NMEKARRVFDQMP 193
+L +C L L+ IHG + G + + L+ L+ + ARR+ P
Sbjct: 11 LLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLCFP 66
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK-PEYYTMVGVLSACASLGALELGV 252
E D ++++++GY+ + P ++ +F M R+ P+ ++ V+ A + +L G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG----- 307
++ S+ +GTTLI MY CG + A KVF EM + V WNAV++
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 308 ---------------------LSMNGYVKV------------------------------ 316
+ + GY+K
Sbjct: 187 DVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAH 246
Query: 317 ------AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+F F +L++ G+ PN + G+L C+ +G + G+ + + + ++
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA-GYSWIVS 305
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
++D+ R G + A + + M + + W +++AG +H + + A + N++ A
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 364
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/587 (36%), Positives = 339/587 (57%), Gaps = 33/587 (5%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
R H+ ++K GL L++ Y L DA + FDD P +++ ++A+++ +
Sbjct: 22 RVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHSS 81
Query: 111 NLEEAINMFRRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+ E + + RR+L L+PD F + + +A +L L + +H + + + V
Sbjct: 82 DPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVK 141
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM------ 223
+SL+D+Y KCG + AR+VFD + K+ V W+++I GYASNG EALD+F +M
Sbjct: 142 SSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLF 201
Query: 224 -------------------------QRENLK-PEYYTMVGVLSACASLGALELGVWASSF 257
+R++++ + + + V+ A L AL LG F
Sbjct: 202 TWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGF 261
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ R FLS+ ++G L+DMY+KC + A +VF + +D + W ++ G + +G +
Sbjct: 262 VMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEV 321
Query: 318 FGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
F ++ ++ G++PN TFVGL+ C+HAGLV +GRQ F+SM R + + P ++HY C +D
Sbjct: 322 FALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLD 381
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGN 437
LL RSG L EA +LI +MP EP+ WGALL+ C+ H T + V + L+ L P +
Sbjct: 382 LLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPST 441
Query: 438 YVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKI 497
Y+LLSN+Y+ + KW+ AK+R +M + I+K+ G SWVE F G+ + E+I
Sbjct: 442 YILLSNVYAVNCKWDSVAKVRKIMAEMEIRKVPGYSWVEAGRESRIFHAGEVPLDVGEEI 501
Query: 498 YSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRI 557
L+EL ++++ G+VP T V+ D+EE EK+ L HSE+LA+AFG++ + P VIR+
Sbjct: 502 TCFLEELVSEMRKRGYVPDTSSVMHDLEEHEKEQHLFVHSERLAVAFGILKSPPGSVIRV 561
Query: 558 AKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLRVCGDCH +K IS I R+IIVRD +RFH F +G+CSC +FW
Sbjct: 562 VKNLRVCGDCHTVMKFISAIAQRKIIVRDASRFHHFEDGNCSCSEFW 608
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 36/322 (11%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
+ ++ P +F + A R +LG + H+ + D VK+SL+++Y CG
Sbjct: 94 LSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGV 153
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP----------- 129
DA KVFD I KN V WTA+ISGY + G EA+++F+ + GL
Sbjct: 154 PQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKA 213
Query: 130 ---------------------DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFV 168
D+F + V+ L L + +HG+V G ++ V
Sbjct: 214 GNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIV 273
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
+LVD+Y+KC ++ AR VF+ + +D++SW++++ G A +G +E ++ M +
Sbjct: 274 GNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGM 333
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQA 286
KP T VG++ AC+ G ++ G M+R E+ P + T +D+ ++ G +++A
Sbjct: 334 KPNEVTFVGLIYACSHAGLVQKGRQLFDSMKR-EYGMKPGVQHYTCYLDLLSRSGYLSEA 392
Query: 287 CKVFREMK-DKDQVVWNAVVSG 307
K+ M + D+ W A++S
Sbjct: 393 EKLITTMPYEPDEATWGALLSA 414
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 3/209 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGF-LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I GFV + A+ + MR + + F V+ A LG + H +++
Sbjct: 206 LISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRL 265
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G V +L+++Y C + A +VF+ I ++V+SWT I+ G G EE ++
Sbjct: 266 GFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALY 325
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN-EAGKGRNVFVATSLVDLYAK 178
R+L G+KP+ + V ++ AC+ G + + + + E G V T +DL ++
Sbjct: 326 NRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSR 385
Query: 179 CGNMEKARRVFDQMP-EKDIVSWSSMIQG 206
G + +A ++ MP E D +W +++
Sbjct: 386 SGYLSEAEKLITTMPYEPDEATWGALLSA 414
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/573 (38%), Positives = 331/573 (57%), Gaps = 34/573 (5%)
Query: 20 SMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCG 79
S + G LP P K+CA LG + HS + GLD + FV S +++Y CG
Sbjct: 2 SPQGPGLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCG 61
Query: 80 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVL 138
DA ++F+++ ++VVSW A+ISG+ + G A+++FR L+ + KPD+ ++ +L
Sbjct: 62 RPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASIL 121
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
+ GK R +A + VFD+M K ++
Sbjct: 122 PS-------------------MGKARVEDIAL--------------LKGVFDEMRFKGLI 148
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
SW++M+ Y +N EA+++F MQ++ ++P+ T+ VL +C + AL LG +
Sbjct: 149 SWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVI 208
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+R S+ +L L+DMYA CG + +A VF M +D V W +++S +G+ + A
Sbjct: 209 KRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAI 268
Query: 319 GVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 378
+F ++ G++P+ FV +L C+HAGL+D G+ +F SM+ F + P +EHY CMVDL
Sbjct: 269 DLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDL 328
Query: 379 LGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNY 438
LGR+G + EA++ I MP++PN VWGALL CR+H D+ + L+ L P +G Y
Sbjct: 329 LGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYY 388
Query: 439 VLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIY 498
VLLSNIY+ + +W D + +RS+M KGI+K+ G S E+ VH F +GD SHP S+ IY
Sbjct: 389 VLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIY 448
Query: 499 SKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIA 558
KL EL +++ G+ P + L D+EEE+K+ L+ HSEKLA+AF LI T P IRI
Sbjct: 449 KKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRIT 508
Query: 559 KNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
NLR C DCH A KLIS I GREII++D NR H
Sbjct: 509 MNLRTCSDCHHAAKLISTIAGREIILKDVNRIH 541
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 133/299 (44%), Gaps = 40/299 (13%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ + +N+ A+E + M+ +G P T VL +C LG R H +I +
Sbjct: 153 MLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRR 212
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ ++ +L+++Y +CG L +A VFD + ++VVSWT+IIS Y G+ EAI++F
Sbjct: 213 MCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFE 272
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ +GL+PDS + V +L AC+ G L K + + +E + +VDL +
Sbjct: 273 KMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRA 332
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G + +A MP +KP +L
Sbjct: 333 GCIREAYDFIMVMP----------------------------------IKPNERVWGALL 358
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMKDK 296
AC +++G+ A+ + R L+ G L ++YA+ GR A V M+ K
Sbjct: 359 GACRIHSNMDIGLLAADSLLR---LAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESK 414
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/583 (36%), Positives = 337/583 (57%), Gaps = 8/583 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P+ + L+ C E G R H IV G ++ L+ +Y CG L A V
Sbjct: 55 PSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSV 114
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F P +NV SWT +++ + + G+ +A+N+ + G+ P+S + + +L A L L
Sbjct: 115 FHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWL 174
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+ +H + G ++FVA L+++YAKC ++ A VF+ + + +++W++++ Y
Sbjct: 175 DRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAY 234
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME-RNEFLSN 266
A NGF ++AL +F M + ++P T V V+ CA + +G ++ R+E +N
Sbjct: 235 ALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHGVIDARSE--AN 292
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
+G LI+MY KC +A KVF M+ KD + WN++++ NGY A ++ ++++
Sbjct: 293 VCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQE 352
Query: 327 C-----GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
GI + TF+G+L C+HAGLV + + ++SM + P GC++DLLGR
Sbjct: 353 SRMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGR 412
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+G LDEA E I SMP P+ +W LL C H + A ++++AL P +SG+YV L
Sbjct: 413 AGWLDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARAADRIMALRPTDSGSYVAL 472
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
SN+Y+ + +W+D A++R +M +G+ K+ G S +E+ GV+HEF+ GD SHP +IY +L
Sbjct: 473 SNLYALAERWDDMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEEL 532
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+ ++ G+VP VL + E K+ HSE+LA+AFG+I++ +RI KNL
Sbjct: 533 RRIEGVIRERGYVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNL 592
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
RVC DCH A K+ISK +GR+IIVRD NRFH F GSCSC+D+W
Sbjct: 593 RVCPDCHSATKIISKFSGRKIIVRDANRFHEFRNGSCSCEDYW 635
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 156/324 (48%), Gaps = 8/324 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M+ F N + A+ M EG P + TF +L A A G H I G
Sbjct: 129 MVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCG 188
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV L+N+Y C LADA VF+ + ++V++WTA+++ Y G +A+ +F
Sbjct: 189 FLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFL 248
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G++P + V V+ C + + +HG ++ + NV V +L+++Y KC
Sbjct: 249 LMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHGVIDARSEA-NVCVGNALINMYGKCA 307
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL-----KPEYYTM 235
+ ++AR+VFD M KDI++W+SMI Y NG+ +AL+++ MQ + + T
Sbjct: 308 SPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITF 367
Query: 236 VGVLSACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+GVL AC+ G ++ SS + F + LID+ + G + +A + M
Sbjct: 368 IGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMP 427
Query: 295 -DKDQVVWNAVVSGLSMNGYVKVA 317
D +W ++ + V+ A
Sbjct: 428 YHPDHTIWTILLGACITHADVERA 451
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 148/299 (49%), Gaps = 6/299 (2%)
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+L +A+ + L R + P + + L C ++ K IH ++ G + ++
Sbjct: 40 DLRDAVQL---LEDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCN 96
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
LV++Y KCG+++ A+ VF P +++ SW+ M+ +A NG +AL++ M E + P
Sbjct: 97 LLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISP 156
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
T + +L A A+L L+ G + FL++ + LI+MYAKC +A AC VF
Sbjct: 157 NSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVF 216
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+ + + W A+V+ ++NG+ + A VF + G++P TFV ++ C +
Sbjct: 217 ESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFG 276
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
GR+ + + + ++++ G+ DEA ++ +M + I W +++A
Sbjct: 277 IGREVHGVIDARSEANVCVGN--ALINMYGKCASPDEARKVFDAM-QRKDIITWNSMIA 332
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/608 (38%), Positives = 349/608 (57%), Gaps = 44/608 (7%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F SN A++ M+ +GF PT ++ L+AC++ D + G + H IV A
Sbjct: 126 LIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVAD 185
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L + FV+ ++ ++Y CG + A +FD + DKNVVSW +ISGY+ GN E I++F
Sbjct: 186 LGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFN 245
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ GLKPD ++ VL A Y +CG
Sbjct: 246 EMQLSGLKPDLVTVSNVLNA-----------------------------------YFRCG 270
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR +F ++P+KD + W++MI GYA NG ++A +F +M R N+KP+ YT+ ++S
Sbjct: 271 RVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVS 330
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+CA L +L G + ++ ++ + L+DMY KCG A +F M ++ +
Sbjct: 331 SCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVIT 390
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G + NG V A ++ ++++ +P+ TFVG+L C +A +V EG+++F+S+S
Sbjct: 391 WNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSIS 450
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL- 419
+ P ++HY CM+ LLGRSG +D+A +LI+ MP EPN +W LL+ C K DL
Sbjct: 451 E-HGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVC---AKGDLK 506
Query: 420 -AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
AE + L L+P N+G Y++LSN+Y+A +W D A +RS+M +K +K SWVEV
Sbjct: 507 NAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVG 566
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F+ D+ HP KIY +L+ L + L+ G+ P T+ VL ++ EEEK ++ HSE
Sbjct: 567 NKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSE 626
Query: 539 KLALAFGLITTAPKDV--IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEG 596
KLALAF LI P V IRI KN+RVC DCH +K S R II+RD+NRFH F G
Sbjct: 627 KLALAFALIRK-PNGVAPIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGG 685
Query: 597 SCSCKDFW 604
CSC D W
Sbjct: 686 KCSCNDNW 693
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 185/403 (45%), Gaps = 69/403 (17%)
Query: 40 CAREHDFQLGVRSHS-LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS 98
CAR +DF R S + + D F+ LL+LY G L+DA VFD++ ++V S
Sbjct: 32 CARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYS 91
Query: 99 WTAIISGYINEGNLE-------------------------------EAINMFRRLLHRGL 127
W ++S Y G +E +A+ + R+ G
Sbjct: 92 WNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGF 151
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
+P +S V L AC+QL DL K IHG + A G N FV ++ D+YAKCG+++KAR
Sbjct: 152 QPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARL 211
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
+FD M +K++VSW+ MI GY G P E + +F MQ LKP+ T+ VL+A
Sbjct: 212 LFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA------ 265
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG 307
Y +CGR+ A +F ++ KD++ W ++ G
Sbjct: 266 -----------------------------YFRCGRVDDARNLFIKLPKKDEICWTTMIVG 296
Query: 308 LSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTP 367
+ NG + A+ +FG + + ++P+ T ++ C + G Q + V +
Sbjct: 297 YAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHG-QVVHGKVVVMGIDN 355
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ +VD+ + G +A + ++MP+ N I W A++ G
Sbjct: 356 SMLVSSALVDMYCKCGVTLDARVIFETMPIR-NVITWNAMILG 397
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 141/287 (49%), Gaps = 16/287 (5%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
DSF ++L + G LS A+ + + + R+V+ +L+ YAK G +E VF
Sbjct: 57 DSFIHNQLLHLYAKFGKLSDAQNVFDNMTK----RDVYSWNTLLSAYAKMGMVENLHVVF 112
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
DQMP +D VS++++I +ASNG +AL + MQ + +P Y+ V L AC+ L L
Sbjct: 113 DQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLR 172
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
G + + N + + DMYAKCG + +A +F M DK+ V WN ++SG
Sbjct: 173 HGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYV 232
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL--TP 367
G +F +++ G++P+ T +L G VD+ R F + + + T
Sbjct: 233 KMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTT 292
Query: 368 MIEHYGCMVDLLGRSGQLDEAHELIKSM---PMEPNAIVWGALLAGC 411
MI Y ++G+ ++A L M ++P++ ++++ C
Sbjct: 293 MIVGY-------AQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSC 332
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/632 (37%), Positives = 367/632 (58%), Gaps = 47/632 (7%)
Query: 14 AIEFYNSMRNEG----FLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEF-V 67
A + ++SM+ EG F P + F+ VL+ R+ G H+ +++ GL+ ++ +
Sbjct: 288 AYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRK-----GREVHAHVIRTGLNDNKVAI 342
Query: 68 KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI-------------------- 107
L+N+Y G +ADA VF+ + +K+ VSW ++ISG
Sbjct: 343 GNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQ 402
Query: 108 ------------NEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+E ++ +A+ F +++ G + + +L+A + L + IH
Sbjct: 403 VSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHA 462
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE-KDIVSWSSMIQGYASNGFPK 214
V + + + +L+ Y KCG M + ++F +M E +D VSW+SMI GY N
Sbjct: 463 LVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLH 522
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
+A+D+ + M ++ + + +T +LSACAS+ LE G+ + R S+ V+G+ L+
Sbjct: 523 KAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALV 582
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
DMY+KCGR+ A + F M ++ WN+++SG + +G+ + A +F ++ G P+
Sbjct: 583 DMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHV 642
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
TFVG+L C+H G V+EG + F SMS V+ L+P +EH+ CMVDLLGR+G+LDE + I S
Sbjct: 643 TFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINS 702
Query: 395 MPMEPNAIVWGALL-AGCRLH-KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
MPM+PN ++W +L A CR + + T+L L+ LEP N+ NYVLL+N+Y++ KW
Sbjct: 703 MPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWE 762
Query: 453 DAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAG 512
D AK R+ M + ++K GCSWV + VH F+ GD HP + IY KL EL K++ AG
Sbjct: 763 DVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAG 822
Query: 513 FVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIK 572
++P T + LFD+E E K+ L+ HSEK+A+AF ++T IRI KNLRVCGDCH A
Sbjct: 823 YIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFG 881
Query: 573 LISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
ISKI GR+I++RD+NRFH F +G CSC D+W
Sbjct: 882 YISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 208/476 (43%), Gaps = 61/476 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACARE--HDFQLGVRSHSLIVK 58
+I G+ N A + M GF+P ++ F L+AC +LGV+ H LI K
Sbjct: 171 LISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 230
Query: 59 AGLDCDEFVKTSLLNLYVHCGYLA-DALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
D V L+++Y C A DA VFD I +N +SW +IIS Y G+ A +
Sbjct: 231 TRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYD 290
Query: 118 MFRRLLHRGL----KP-DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN-VFVATS 171
+F + GL KP D+FS VL + G + +H +V G N V +
Sbjct: 291 LFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKG-----REVHAHVIRTGLNDNKVAIGNG 345
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPE 231
LV++YAK G + A VF+ M EKD VSW+S+I G N ++A +MF +L PE
Sbjct: 346 LVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMF------SLMPE 399
Query: 232 Y--------------------------------------YTMVGVLSACASLGALELGVW 253
Y T + +LSA +SL E+
Sbjct: 400 YDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQ 459
Query: 254 ASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD-KDQVVWNAVVSGLSMNG 312
+ + + + +G L+ Y KCG M + K+F M + +D+V WN+++SG N
Sbjct: 460 IHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNE 519
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ A + + + G + + TF +L C ++ G + R L +
Sbjct: 520 LLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRA-CLESDVVVG 578
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+VD+ + G++D A + MP+ N W ++++G H + A + +++
Sbjct: 579 SALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGEKALKLFTRMM 633
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 195/426 (45%), Gaps = 55/426 (12%)
Query: 39 ACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS 98
+C E +L ++S +K G + F+ +L+N+YV G L A K+FD++ ++N+V+
Sbjct: 112 SCCSEEARELHLQS----IKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVT 167
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD--LSTAKWIHGY 156
W +ISGY G +EA FR ++ G P+ ++ L AC + G IHG
Sbjct: 168 WACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGL 227
Query: 157 VNEAGKGRNVFVATSLVDLYAKC-GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+++ G +V V L+ +Y C + AR VFD + ++ +SW+S+I Y+ G
Sbjct: 228 ISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVS 287
Query: 216 ALDMFYNMQRENL----KP-EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV-L 269
A D+F +MQ+E L KP + ++ VL G + + R N V +
Sbjct: 288 AYDLFSSMQKEGLGFSFKPNDAFSEFSVLEE-----GRRKGREVHAHVIRTGLNDNKVAI 342
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN------------------ 311
G L++MYAK G +A AC VF M +KD V WN+++SGL N
Sbjct: 343 GNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQ 402
Query: 312 --------------GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V A F Q+ + G + TF+ +L + L + Q +
Sbjct: 403 VSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQ-IH 461
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC----RL 413
++ + L+ ++ G+ G+++E ++ M + + W ++++G L
Sbjct: 462 ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELL 521
Query: 414 HKKTDL 419
HK DL
Sbjct: 522 HKAMDL 527
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 145/284 (51%), Gaps = 22/284 (7%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
N+F++ +L+++Y + G++ A+++FD+M +++V+W+ +I GY NG P EA F +M
Sbjct: 133 NLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMV 192
Query: 225 RENLKPEYYTMVGVLSACASLG--ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
R P +Y L AC G +LGV + + + S+ V+ LI MY C
Sbjct: 193 RAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLD 252
Query: 283 MAQ-ACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI----QPNGNTFV 337
A A VF + ++ + WN+++S S G A+ +F ++K G+ +PN + F
Sbjct: 253 SANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPN-DAF- 310
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY----GCMVDLLGRSGQLDEAHELIK 393
+ +++EGR+ + T + ++ +V++ +SG + +A + +
Sbjct: 311 ------SEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE 364
Query: 394 SMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE--PWNS 435
M +E +++ W +L++G ++ ++ A + + + + WNS
Sbjct: 365 LM-VEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNS 407
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 123/234 (52%), Gaps = 7/234 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G++ N+ A++ M +G +FTF +L ACA + G+ H+ ++A
Sbjct: 511 MISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRAC 570
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D V ++L+++Y CG + A + F+ +P +NV SW ++ISGY G+ E+A+ +F
Sbjct: 571 LESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFT 630
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAKC 179
R++ G PD + V VL+AC+ +G + ++E + V + +VDL +
Sbjct: 631 RMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRA 690
Query: 180 GNMEKARRVFDQMPEK-DIVSWSSMIQGYA-SNG----FPKEALDMFYNMQREN 227
G +++ + MP K +++ W +++ +NG + A +M ++ +N
Sbjct: 691 GKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQN 744
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/577 (37%), Positives = 337/577 (58%), Gaps = 10/577 (1%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +++A R Q + H+ ++ G + T L+ L +A +F +P
Sbjct: 12 YEAIVRAGPRVKQLQ---QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVP 68
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
+ + ++I + +RR+L + P +++ V+ +C L L K
Sbjct: 69 LPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+H + +G G + +V +LV Y+KCG+ME AR+VFD+MPEK IV+W+S++ G+ NG
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
EA+ +FY M+ +P+ T V +LSACA GA+ LG W ++ N LGT
Sbjct: 189 ADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTA 248
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE-KCGIQP 331
LI++Y++CG + +A +VF +MK+ + W A++S +GY + A +F ++E CG P
Sbjct: 249 LINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIP 308
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
N TFV +L C HAGLV+EGR + M++ + L P +EH+ CMVD+LGR+G LDEA++
Sbjct: 309 NNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKF 368
Query: 392 IKSMPMEPNAI---VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSAS 448
I + A +W A+L C++H+ DL + +LIALEP N G++V+LSNIY+ S
Sbjct: 369 IHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALS 428
Query: 449 HKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKL 508
K ++ + IR M ++K G S +EV+ + F +GD SH + +IY L+ L ++
Sbjct: 429 GKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRC 488
Query: 509 KAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDV-IRIAKNLRVCGDC 567
K G+ P ++ V+ +EEEEK++ L HSEKLA+AFGL+ T DV I I KNLR+C DC
Sbjct: 489 KEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTV--DVAITIVKNLRICEDC 546
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H A K IS ++ R+I VRD RFH F GSCSC D+W
Sbjct: 547 HSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 173/305 (56%), Gaps = 6/305 (1%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
H + +Y M + P+N+TF V+K+CA ++G H V +G D +V+ +L+
Sbjct: 90 HCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALV 149
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
Y CG + A +VFD +P+K++V+W +++SG+ G +EAI +F ++ G +PDS
Sbjct: 150 TFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSA 209
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
+ V +L+AC Q G +S W+H Y+ G NV + T+L++LY++CG++ KAR VFD+M
Sbjct: 210 TFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKM 269
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELG 251
E ++ +W++MI Y ++G+ ++A+++F M+ + P T V VLSACA G +E G
Sbjct: 270 KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEG 329
Query: 252 VWASSFMERNEFLSNPV-LGTTLIDMYAKCGRMAQACKVFREM----KDKDQVVWNAVVS 306
M ++ L V ++DM + G + +A K ++ K +W A++
Sbjct: 330 RSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLG 389
Query: 307 GLSMN 311
M+
Sbjct: 390 ACKMH 394
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 109/210 (51%), Gaps = 6/210 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GF N AI+ + MR GF P + TF +L ACA+ LG H I+ G
Sbjct: 179 LVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG 238
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + + T+L+NLY CG + A +VFD + + NV +WTA+IS Y G ++A+ +F
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN 298
Query: 121 RLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAK 178
++ G P++ + V VL+AC G + + ++ + ++ + V +VD+ +
Sbjct: 299 KMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGR 358
Query: 179 CGNMEKARRVFDQMPEKDIVS----WSSMI 204
G +++A + Q+ + W++M+
Sbjct: 359 AGFLDEAYKFIHQLDATGKATAPALWTAML 388
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/704 (34%), Positives = 359/704 (50%), Gaps = 105/704 (14%)
Query: 6 VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
+ ++ Q +E + M+ T VL+AC + + H + + GLD D
Sbjct: 210 LQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDV 269
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIIS-----GYINE----------- 109
+ L+++Y G L A +VFD + ++N SW ++IS G++N+
Sbjct: 270 SLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESS 329
Query: 110 -------------------GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTA 150
G EE +N+ +R+ G KP+S S+ VL A ++LG L+
Sbjct: 330 DMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMG 389
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKC------------------------------- 179
K HGYV G +V+V TSL+D+Y K
Sbjct: 390 KETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFK 449
Query: 180 GNMEKARRVFDQMPEK----DIVSWSSMIQGYASNGFPKEAL------------------ 217
G E A R+ +QM ++ D+V+W+ MI GYA G KEAL
Sbjct: 450 GMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSW 509
Query: 218 -----------------DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMER 260
F MQ+E + P ++ +L ACASL L+ G R
Sbjct: 510 TALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIR 569
Query: 261 NEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
N F+ + + T LIDMY+K + A KVFR +++K WN ++ G ++ G K A V
Sbjct: 570 NGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISV 629
Query: 321 FGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLG 380
F +++K G+ P+ TF LL C ++GL+ EG ++F+SM + + P +EHY CMVDLLG
Sbjct: 630 FNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLG 689
Query: 381 RSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVL 440
R+G LDEA +LI +MP++P+A +WGALL CR+HK AE L LEP NS NY+L
Sbjct: 690 RAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYIL 749
Query: 441 LSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSK 500
+ N+YS ++W D +R +MG G++ + SW++++ VH F + HP + KIY +
Sbjct: 750 MMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFE 809
Query: 501 LDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKN 560
L +L +++K G+VP + V +++E EKQ L H+EKLA+ +GLI + IR+ KN
Sbjct: 810 LYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKN 869
Query: 561 LRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH A K IS + RE+ +RD RFH F EG CSC DFW
Sbjct: 870 TRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 39/435 (8%)
Query: 15 IEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNL 74
+E + + +G + + + LK C R D LG+ H ++K G D D +++ +L+N
Sbjct: 118 LEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNF 177
Query: 75 YVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSI 134
Y C L A +VF ++P+ + W I + L++ + +FR++ LK ++ +I
Sbjct: 178 YGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATI 237
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPE 194
VRVL AC ++G L+ AK IHGYV G +V + L+ +Y+K G +E ARRVFD M
Sbjct: 238 VRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMEN 297
Query: 195 KDIVSWSSMIQGYASNGFPKEALDMFY--------------------------------- 221
++ SW+SMI YA+ GF +A +FY
Sbjct: 298 RNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNI 357
Query: 222 --NMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAK 279
MQ E KP +M VL A + LG L +G ++ RN F + +GT+LIDMY K
Sbjct: 358 LQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVK 417
Query: 280 CGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGL 339
+ A VF MK+++ WN++VSG S G + A + Q+EK GI+P+ T+ G+
Sbjct: 418 NHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGM 477
Query: 340 LCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME- 398
+ G G E + ++ LTP + + ++ ++G ++ + M E
Sbjct: 478 ISGYAMWGCGKEALAVLHQ-TKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEG 536
Query: 399 --PNAIVWGALLAGC 411
PN+ LL C
Sbjct: 537 VMPNSASITCLLRAC 551
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 180/393 (45%), Gaps = 36/393 (9%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINE-GNLEEAINMFRRLLHRGLK 128
+L++ Y+ G A VF +N + W + + + + G+L + +F+ L +G+
Sbjct: 71 NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 130
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
DS L CT++ D+ IHG + + G +V++ +L++ Y +C +EKA +V
Sbjct: 131 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 190
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F +MP + + W+ I + ++ +++F MQ LK E T+V VL AC +GAL
Sbjct: 191 FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 250
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
++ R S+ L LI MY+K G++ A +VF M++++ WN+++S
Sbjct: 251 NAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSY 310
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE---------GRQFFNSM 359
+ G++ A+ +F +LE ++P+ T+ LL G G +E G F +
Sbjct: 311 AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 370
Query: 360 SRVFSLTPMIEHYG-------------------------CMVDLLGRSGQLDEAHELIKS 394
S + S+ I G ++D+ ++ L A + +
Sbjct: 371 SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDN 430
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
M N W +L++G + A +LNQ+
Sbjct: 431 MK-NRNIFAWNSLVSGYSFKGMFEDALRLLNQM 462
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/570 (37%), Positives = 330/570 (57%), Gaps = 2/570 (0%)
Query: 36 VLKACAREHDFQLGVRS-HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
+L AC E + L +R+ H ++ E + + + Y CG L A VF + K
Sbjct: 422 LLPACLEESEL-LSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIH 154
+V SW A+I G+ G+ +A++ + + G+ PD FSIV +L AC +LG L K IH
Sbjct: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540
Query: 155 GYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
G+V G N FVA SL+ LY C R F++M +K+ V W++M+ GY+ N P
Sbjct: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPN 600
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
EAL +F M + L+P+ + +L AC+ L AL LG F +N + + + +L+
Sbjct: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM 660
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
DMYAK G + + ++F + K+ WN +++G ++G A +F +++ QP+
Sbjct: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
TF+G+L C HAGLV EG + M ++ L P +EHY C++D+LGR+G+L+EA I
Sbjct: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE 780
Query: 395 MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDA 454
MP EP+A +W +LL+ + ++ E +L+ALE + +Y+LLSN+Y+ + KW+
Sbjct: 781 MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVV 840
Query: 455 AKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFV 514
+R M D +QK GCSW+E+ G V+ F+ G+NS+P S++I + L ++ G+
Sbjct: 841 RMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYT 900
Query: 515 PTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLI 574
P VL ++EE EK+ L HSEK+A+ FG + T +RI+KNLR+C DCH A K I
Sbjct: 901 PDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYI 960
Query: 575 SKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
SK REI++RDN RFH F +G CSC D+W
Sbjct: 961 SKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 224/446 (50%), Gaps = 23/446 (5%)
Query: 1 MIRGFVSNDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++ G+V N+ + AI F + F P NFTFP ++KAC + D LG H + VK
Sbjct: 180 LVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKM 239
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL D FV +++ LY CG+L +A+++FD +P++N++SW ++I G+ G EA F
Sbjct: 240 GLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAF 299
Query: 120 RRLLHR--GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
R LL GL PD ++V +L C+ G++ IHG + G + V +L+D+Y+
Sbjct: 300 RSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYS 359
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN--MQRENLKPEYYTM 235
KCG + +A +F ++ K +VSW+SMI Y+ GF E D+ M+ E ++ T+
Sbjct: 360 KCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTI 419
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+ +L AC L + R+ F ++ I YAKCG + A VF M
Sbjct: 420 LNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT 479
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
K WNAV+ G + NG A + ++ + GI P+ + V LL C GL+ G++
Sbjct: 480 KSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEI 539
Query: 356 FN-------SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
M+ +++ + ++ C GR+ + M + N++ W A+L
Sbjct: 540 HGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRT--------YFERMG-DKNSVCWNAML 590
Query: 409 AGCRLHKKTDLAEHVLNQLIA--LEP 432
+G ++ + A + Q+++ LEP
Sbjct: 591 SGYSQNELPNEALSLFRQMLSDGLEP 616
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 168/304 (55%), Gaps = 4/304 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G N A++FY M G LP +F+ +L AC R Q G H +++ G
Sbjct: 488 VIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNG 547
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ + FV SLL+LY HC F+ + DKN V W A++SGY EA+++FR
Sbjct: 548 LEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFR 607
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L GL+PD +I +L AC+QL L K +H + + + FVA SL+D+YAK G
Sbjct: 608 QMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSG 667
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ ++R+F+++ K++ SW+ MI G+ +G +A+++F +M+R + +P+ +T +GVL
Sbjct: 668 FLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQ 727
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREM-KDKD 297
AC G + G+ + M+ + P L +IDM + GR+ +A EM ++ D
Sbjct: 728 ACCHAGLVSEGLNYLAQMQ-TLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPD 786
Query: 298 QVVW 301
+W
Sbjct: 787 AKIW 790
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 179/314 (57%), Gaps = 6/314 (1%)
Query: 36 VLKACAREHDFQLGVR-SHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK 94
+L+ C + + ++G + L V + D + T L+ +Y CGY ++ VFD + +K
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
N+ W A++SGY+ +EAI+ F L+ +PD+F+ ++ ACT D+ K +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFP 213
HG + G ++FV +++ LY KCG +++A +FD+MPE++++SW+S+I+G++ NGF
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 214 KEALDMFYNMQR--ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
EA F ++ + L P+ TMV +L C+ G +++G+ + + ++
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ--LEKCGI 329
LIDMY+KCG +++A +FR++++K V WN+++ S G+V F + + +E+ +
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELM 412
Query: 330 QPNGNTFVGLLCGC 343
+ N T + LL C
Sbjct: 413 EVNEVTILNLLPAC 426
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,660,448,627
Number of Sequences: 23463169
Number of extensions: 405292489
Number of successful extensions: 1071712
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9522
Number of HSP's successfully gapped in prelim test: 2526
Number of HSP's that attempted gapping in prelim test: 895620
Number of HSP's gapped (non-prelim): 56074
length of query: 604
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 455
effective length of database: 8,863,183,186
effective search space: 4032748349630
effective search space used: 4032748349630
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)