BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044872
(604 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/604 (59%), Positives = 462/604 (76%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I GFV+N F ++ + S+R G FTFP VLKAC R +LG+ HSL+VK G
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG 141
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D TSLL++Y G L DA K+FD+IPD++VV+WTA+ SGY G EAI++F+
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFK 201
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+++ G+KPDS+ IV+VL+AC +GDL + +WI Y+ E +N FV T+LV+LYAKCG
Sbjct: 202 KMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCG 261
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
MEKAR VFD M EKDIV+WS+MIQGYASN FPKE +++F M +ENLKP+ +++VG LS
Sbjct: 262 KMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLS 321
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
+CASLGAL+LG W S ++R+EFL+N + LIDMYAKCG MA+ +VF+EMK+KD V+
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVI 381
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
NA +SGL+ NG+VK++F VFGQ EK GI P+G+TF+GLLCGC HAGL+ +G +FFN++S
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAIS 441
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V++L +EHYGCMVDL GR+G LD+A+ LI MPM PNAIVWGALL+GCRL K T LA
Sbjct: 442 CVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLA 501
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E VL +LIALEPWN+GNYV LSNIYS +W++AA++R MM KG++KI G SW+E++G
Sbjct: 502 ETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGK 561
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VHEFL D SHPLS+KIY+KL++L +++ GFVPTT+ V FD+EEEEK+ L HSEKL
Sbjct: 562 VHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKL 621
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A+A GLI+T VIR+ KNLRVCGDCHE +KLISKIT REI+VRDNNRFHCF GSCSC
Sbjct: 622 AVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSC 681
Query: 601 KDFW 604
D+W
Sbjct: 682 NDYW 685
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 194/388 (50%), Gaps = 6/388 (1%)
Query: 39 ACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS 98
AC H Q+ H ++ L D F+ LL + + +F N+
Sbjct: 23 ACTVNHLKQI----HVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFL 78
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
+ ++I+G++N E +++F + GL F+ VL ACT+ +H V
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 159 EAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALD 218
+ G +V TSL+ +Y+ G + A ++FD++P++ +V+W+++ GY ++G +EA+D
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
+F M +KP+ Y +V VLSAC +G L+ G W +ME E N + TTL+++YA
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 279 KCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVG 338
KCG+M +A VF M +KD V W+ ++ G + N + K +F Q+ + ++P+ + VG
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 339 LLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPME 398
L C G +D G + + R LT + ++D+ + G + E+ K M E
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLF-MANALIDMYAKCGAMARGFEVFKEMK-E 376
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
+ ++ A ++G + L+ V Q
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust.
Identities = 279/637 (43%), Positives = 407/637 (63%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M RG + A++ Y M + G LP ++TFPFVLK+CA+ F+ G + H ++K G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD------------------------------- 89
D D +V TSL+++YV G L DA KVFD
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+IP K+VVSW A+ISGY GN +EA+ +F+ ++ ++PD ++V V++AC Q G +
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 284
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
+ +H ++++ G G N+ + +L+DLY+KCG +E A +F+++P KD++SW+++I GY
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME-RNEFLSNPV 268
KEAL +F M R P TM+ +L ACA LGA+++G W +++ R + ++N
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 269 -LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
L T+LIDMYAKCG + A +VF + K WNA++ G +M+G +F +F ++ K
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 464
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
GIQP+ TFVGLL C+H+G++D GR F +M++ + +TP +EHYGCM+DLLG SG E
Sbjct: 465 GIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKE 524
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A E+I M MEP+ ++W +LL C++H +L E LI +EP N G+YVLLSNIY++
Sbjct: 525 AEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYAS 584
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WN+ AK R+++ DKG++K+ GCS +E+D VVHEF++GD HP + +IY L+E+
Sbjct: 585 AGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 644
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
L+ AGFVP T VL ++EEE K+ L HSEKLA+AFGLI+T P + I KNLRVC +C
Sbjct: 645 LEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 704
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
HEA KLISKI REII RD RFH F +G CSC D+W
Sbjct: 705 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/606 (41%), Positives = 384/606 (63%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ N+ FQ A+ Y++M+ P +FTFP +LKAC+ Q+G H+ + + G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFD--DIPDKNVVSWTAIISGYINEGNLEEAINM 118
D D FV+ L+ LY C L A VF+ +P++ +VSWTAI+S Y G EA+ +
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 119 FRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
F ++ +KPD ++V VL A T L DL + IH V + G + SL +YAK
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAK 269
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG + A+ +FD+M +++ W++MI GYA NG+ +EA+DMF+ M ++++P+ ++
Sbjct: 270 CGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSA 329
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+SACA +G+LE ++ R+++ + + + LIDM+AKCG + A VF D+D
Sbjct: 330 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV 389
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
VVW+A++ G ++G + A ++ +E+ G+ PN TF+GLL C H+G+V EG FFN
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNR 449
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M+ + P +HY C++DLLGR+G LD+A+E+IK MP++P VWGALL+ C+ H+ +
Sbjct: 450 MAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L E+ QL +++P N+G+YV LSN+Y+A+ W+ A++R M +KG+ K GCSWVEV
Sbjct: 509 LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
G + F VGD SHP E+I +++ + ++LK GFV D L D+ +EE + L HSE
Sbjct: 569 GRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSE 628
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
++A+A+GLI+T +RI KNLR C +CH A KLISK+ REI+VRD NRFH F +G C
Sbjct: 629 RIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVC 688
Query: 599 SCKDFW 604
SC D+W
Sbjct: 689 SCGDYW 694
Score = 206 bits (523), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 197/367 (53%), Gaps = 4/367 (1%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+ ++ GL F+ T L++ G + A +VFDD+P + W AII GY +
Sbjct: 41 HARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHF 100
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
++A+ M+ + + PDSF+ +L AC+ L L +++H V G +VFV L
Sbjct: 101 QDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGL 160
Query: 173 VDLYAKCGNMEKARRVFD--QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+ LYAKC + AR VF+ +PE+ IVSW++++ YA NG P EAL++F M++ ++KP
Sbjct: 161 IALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 220
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
++ +V VL+A L L+ G + + + P L +L MYAKCG++A A +F
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILF 280
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
+MK + ++WNA++SG + NGY + A +F ++ ++P+ + + C G ++
Sbjct: 281 DKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLE 340
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ R + + R + ++D+ + G ++ A L+ ++ + +VW A++ G
Sbjct: 341 QARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVG 398
Query: 411 CRLHKKT 417
LH +
Sbjct: 399 YGLHGRA 405
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 145/290 (50%), Gaps = 14/290 (4%)
Query: 126 GLKPDSF--SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNME 183
G+ DSF S++ T QL K IH + G + F+ T L+ + G++
Sbjct: 17 GIHSDSFYASLIDSATHKAQL------KQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 70
Query: 184 KARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
AR+VFD +P I W+++I+GY+ N ++AL M+ NMQ + P+ +T +L AC+
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR--EMKDKDQVVW 301
L L++G + + + R F ++ + LI +YAKC R+ A VF + ++ V W
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
A+VS + NG A +F Q+ K ++P+ V +L T + +GR S+ +
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 362 V-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + P + + + + GQ+ A L M PN I+W A+++G
Sbjct: 251 MGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISG 297
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 526 bits (1356), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/638 (40%), Positives = 393/638 (61%), Gaps = 34/638 (5%)
Query: 1 MIRGFVSN-DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IR + S D F + + P +TFPF++KA A LG H + VK+
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ D FV SL++ Y CG L A KVF I +K+VVSW ++I+G++ +G+ ++A+ +F
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+++ +K ++V VL+AC ++ +L + + Y+ E N+ +A +++D+Y KC
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKC 280
Query: 180 GNMEKARRVFD-------------------------------QMPEKDIVSWSSMIQGYA 208
G++E A+R+FD MP+KDIV+W+++I Y
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE 340
Query: 209 SNGFPKEALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
NG P EAL +F+ +Q ++N+K T+V LSACA +GALELG W S+++++ N
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
+ + LI MY+KCG + ++ +VF ++ +D VW+A++ GL+M+G A +F ++++
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
++PNG TF + C C+H GLVDE F+ M + + P +HY C+VD+LGRSG L++
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A + I++MP+ P+ VWGALL C++H +LAE +L+ LEP N G +VLLSNIY+
Sbjct: 521 AVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAK 580
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
KW + +++R M G++K GCS +E+DG++HEFL GDN+HP+SEK+Y KL E+ K
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEK 640
Query: 508 LKAAGFVPTTDHVLFDIEEEE-KQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGD 566
LK+ G+ P VL IEEEE K+ L HSEKLA+ +GLI+T VIR+ KNLRVCGD
Sbjct: 641 LKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGD 700
Query: 567 CHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
CH KLIS++ REIIVRD RFH F G CSC DFW
Sbjct: 701 CHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 195/399 (48%), Gaps = 37/399 (9%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGY--LADALKVFDDIPDKNVVSWTAIISGYIN 108
++H +++ G D + + L + + L A KVFD+IP N +W +I Y +
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 109 EGNLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVF 167
+ +I F ++ P+ ++ ++ A ++ LS + +HG ++ G +VF
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167
Query: 168 VATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN 227
VA SL+ Y CG+++ A +VF + EKD+VSW+SMI G+ G P +AL++F M+ E+
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
+K + TMVGVLSACA + LE G S++E N N L ++DMY KCG + A
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 288 KVFREMKDKDQVV-------------------------------WNAVVSGLSMNGYVKV 316
++F M++KD V WNA++S NG
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347
Query: 317 AFGVFGQLE-KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A VF +L+ + ++ N T V L C G ++ GR + +S + + +
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSAL 406
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + + G L+++ E+ S+ + + VW A++ G +H
Sbjct: 407 IHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 161/328 (49%), Gaps = 21/328 (6%)
Query: 135 VRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA--KCGNMEKARRVFDQM 192
+ ++ C L L K HG++ G + + A+ L + A ++E AR+VFD++
Sbjct: 34 ISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALELG 251
P+ + +W+++I+ YAS P ++ F +M E+ P YT ++ A A + +L LG
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
++ S+ + +LI Y CG + ACKVF +K+KD V WN++++G
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF--FNSMSRV-FSLTPM 368
G A +F ++E ++ + T VG+L C ++ GRQ + +RV +LT
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
M+D+ + G +++A L +M E + + W +L G + + + A VLN +
Sbjct: 271 ----NAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 429 A--LEPWNSGNYVLLSNIYSASHKWNDA 454
+ WN+ L + Y + K N+A
Sbjct: 326 QKDIVAWNA-----LISAYEQNGKPNEA 348
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 509 bits (1312), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/605 (40%), Positives = 377/605 (62%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+VSN + + + M G T V CA LG HS+ VKA
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ +LL++Y CG L A VF ++ D++VVS+T++I+GY EG EA+ +F
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G+ PD +++ VL C + L K +H ++ E G ++FV+ +L+D+YAKCG
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMF-YNMQRENLKPEYYTMVGVL 239
+M++A VF +M KDI+SW+++I GY+ N + EAL +F ++ + P+ T+ VL
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACASL A + G ++ RN + S+ + +L+DMYAKCG + A +F ++ KD V
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W +++G M+G+ K A +F Q+ + GI+ + +FV LL C+H+GLVDEG +FFN M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ P +EHY C+VD+L R+G L +A+ I++MP+ P+A +WGALL GCR+H L
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE V ++ LEP N+G YVL++NIY+ + KW ++R +G +G++K GCSW+E+ G
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 746
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
V+ F+ GD+S+P +E I + L ++ ++ G+ P T + L D EE EK+ L HSEK
Sbjct: 747 RVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEK 806
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A G+I++ +IR+ KNLRVCGDCHE K +SK+T REI++RD+NRFH F +G CS
Sbjct: 807 LAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 866
Query: 600 CKDFW 604
C+ FW
Sbjct: 867 CRGFW 871
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 215/419 (51%), Gaps = 5/419 (1%)
Query: 11 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
F +I + M + G ++TF V K+ + G + H I+K+G V S
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L+ Y+ + A KVFD++ +++V+SW +II+GY++ G E+ +++F ++L G++ D
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
+IV V C +S + +H +A R +L+D+Y+KCG+++ A+ VF
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M ++ +VS++SMI GYA G EA+ +F M+ E + P+ YT+ VL+ CA L+
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G +++ N+ + + L+DMYAKCG M +A VF EM+ KD + WN ++ G S
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 311 NGYVKVAFGVFG-QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMI 369
N Y A +F LE+ P+ T +L C D+GR+ + R +
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD-- 533
Query: 370 EHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
H +VD+ + G L AH L + + + W ++AG +H A + NQ+
Sbjct: 534 RHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 194/379 (51%), Gaps = 2/379 (0%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
T VL+ CA + G + I G D + + L +Y +CG L +A +VFD++
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
+ + W +++ G+ +I +F++++ G++ DS++ V + + L + +
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
+HG++ ++G G V SLV Y K ++ AR+VFD+M E+D++SW+S+I GY SNG
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 212 FPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGT 271
++ L +F M ++ + T+V V + CA + LG S + F
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 272 TLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP 331
TL+DMY+KCG + A VFREM D+ V + ++++G + G A +F ++E+ GI P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHEL 391
+ T +L C L+DEG++ + + L I ++D+ + G + EA EL
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQEA-EL 453
Query: 392 IKSMPMEPNAIVWGALLAG 410
+ S + I W ++ G
Sbjct: 454 VFSEMRVKDIISWNTIIGG 472
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 149/318 (46%), Gaps = 4/318 (1%)
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
D++V + + GNLE A+ + + D ++ VL C L K
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
+ ++ G + + + L +Y CG++++A RVFD++ + + W+ ++ A +G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
++ +F M ++ + YT V + +SL ++ G F+ ++ F +G +
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
L+ Y K R+ A KVF EM ++D + WN++++G NG + VF Q+ GI+ +
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
T V + GC + L+ GR +S+ + ++D+ + G LD A +
Sbjct: 296 LATIVSVFAGCADSRLISLGRA-VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 393 KSMPMEPNAIVWGALLAG 410
+ M + + + + +++AG
Sbjct: 355 REMS-DRSVVSYTSMIAG 371
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/640 (39%), Positives = 369/640 (57%), Gaps = 36/640 (5%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR F F A+ + MR G P + FP VLK+C D + G H IV+ G
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 61 LDCDEFVKTSLLNLY---------VHCGYLADAL-------------------------- 85
+DCD + +L+N+Y + G + D +
Sbjct: 136 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV 195
Query: 86 -KVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
+VF+ +P K+VVS+ II+GY G E+A+ M R + LKPDSF++ VL ++
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
D+ K IHGYV G +V++ +SLVD+YAK +E + RVF ++ +D +SW+S++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GY NG EAL +F M +KP V+ ACA L L LG ++ R F
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
SN + + L+DMY+KCG + A K+F M D+V W A++ G +++G+ A +F ++
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
++ G++PN FV +L C+H GLVDE +FNSM++V+ L +EHY + DLLGR+G+
Sbjct: 436 KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 495
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
L+EA+ I M +EP VW LL+ C +HK +LAE V ++ ++ N G YVL+ N+
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y+++ +W + AK+R M KG++K CSW+E+ H F+ GD SHP +KI L +
Sbjct: 556 YASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAV 615
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
+++ G+V T VL D++EE K+ L HSE+LA+AFG+I T P IR+ KN+R+C
Sbjct: 616 MEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRIC 675
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH AIK ISKIT REIIVRDN+RFH F G+CSC D+W
Sbjct: 676 TDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 179/381 (46%), Gaps = 40/381 (10%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
++++Y + L +AL +F + V++W ++I + ++ +A+ F + G PD
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK---------CGN 181
VL +CT + DL + +HG++ G +++ +L+++YAK GN
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 182 ---------------------------MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPK 214
++ RRVF+ MP KD+VS++++I GYA +G +
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 215 EALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI 274
+AL M M +LKP+ +T+ VL + + G ++ R S+ +G++L+
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
DMYAK R+ + +VF + +D + WN++V+G NG A +F Q+ ++P
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSR-VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIK 393
F ++ C H + G+Q + R F I +VD+ + G + A ++
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA--SALVDMYSKCGNIKAARKIFD 402
Query: 394 SMPMEPNAIVWGALLAGCRLH 414
M + + + W A++ G LH
Sbjct: 403 RMNV-LDEVSWTAIIMGHALH 422
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/297 (18%), Positives = 120/297 (40%), Gaps = 38/297 (12%)
Query: 169 ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 228
A+ ++ +Y + +A +F + +++W S+I+ + +AL F M+
Sbjct: 42 ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM----- 283
P++ VL +C + L G F+ R + G L++MYAK M
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161
Query: 284 ---------------------AQAC----------KVFREMKDKDQVVWNAVVSGLSMNG 312
A+ C +VF M KD V +N +++G + +G
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221
Query: 313 YVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHY 372
+ A + ++ ++P+ T +L + V +G++ + R + +
Sbjct: 222 MYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK-GIDSDVYIG 280
Query: 373 GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+VD+ +S +++++ + + + I W +L+AG + + + A + Q++
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCR-DGISWNSLVAGYVQNGRYNEALRLFRQMVT 336
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/527 (45%), Positives = 348/527 (66%), Gaps = 3/527 (0%)
Query: 81 LADALKVFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGL-KPDSFSIVRVL 138
++ A KVF I NV W +I GY GN A +++R + GL +PD+ + ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
A T + D+ + IH V +G G ++V SL+ LYA CG++ A +VFD+MPEKD+V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
+W+S+I G+A NG P+EAL ++ M + +KP+ +T+V +LSACA +GAL LG +M
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ N L+D+YA+CGR+ +A +F EM DK+ V W +++ GL++NG+ K A
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 319 GVFGQLEKC-GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
+F +E G+ P TFVG+L C+H G+V EG ++F M + + P IEH+GCMVD
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGN 437
LL R+GQ+ +A+E IKSMPM+PN ++W LL C +H +DLAE Q++ LEP +SG+
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 428
Query: 438 YVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKI 497
YVLLSN+Y++ +W+D KIR M G++K+ G S VEV VHEFL+GD SHP S+ I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 498 YSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRI 557
Y+KL E+ +L++ G+VP +V D+EEEEK+ + HSEK+A+AF LI+T + I +
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 558 AKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
KNLRVC DCH AIKL+SK+ REI+VRD +RFH F GSCSC+D+W
Sbjct: 549 VKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 203/337 (60%), Gaps = 8/337 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+IRG+ A Y MR G + P T+PF++KA D +LG HS+++++
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G +V+ SLL+LY +CG +A A KVFD +P+K++V+W ++I+G+ G EEA+ ++
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G+KPD F+IV +L+AC ++G L+ K +H Y+ + G RN+ + L+DLYA+C
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQR-ENLKPEYYTMVGV 238
G +E+A+ +FD+M +K+ VSW+S+I G A NGF KEA+++F M+ E L P T VG+
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-D 295
L AC+ G ++ G M R E+ P + ++D+ A+ G++ +A + + M
Sbjct: 331 LYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 389
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
+ V+W ++ +++G +A F +++ ++PN
Sbjct: 390 PNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPN 424
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 493 bits (1270), Expect = e-138, Method: Compositional matrix adjust.
Identities = 245/628 (39%), Positives = 378/628 (60%), Gaps = 37/628 (5%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
I FY +R+ G F+F +LKA ++ G+ H + K CD FV+T ++
Sbjct: 95 TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMD 154
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFS 133
+Y CG + A VFD++ ++VV+W +I Y G ++EA +F + + PD
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 134 IVRVLTACTQLGDLSTAKWIHGYVNE-----------------AGKG------------- 163
+ +++AC + G++ + I+ ++ E AG G
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 164 -RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
RN+FV+T++V Y+KCG ++ A+ +FDQ +KD+V W++MI Y + +P+EAL +F
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 223 MQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR 282
M +KP+ +M V+SACA+LG L+ W S + N S + LI+MYAKCG
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 283 MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCG 342
+ VF +M ++ V W+++++ LSM+G A +F ++++ ++PN TFVG+L G
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 343 CTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
C+H+GLV+EG++ F SM+ +++TP +EHYGCMVDL GR+ L EA E+I+SMP+ N +
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514
Query: 403 VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMG 462
+WG+L++ CR+H + +L + +++ LEP + G VL+SNIY+ +W D IR +M
Sbjct: 515 IWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVME 574
Query: 463 DKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLF 522
+K + K +G S ++ +G HEFL+GD H S +IY+KLDE+ +KLK AG+VP VL
Sbjct: 575 EKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLV 634
Query: 523 DIEEEEKQYFLACHSEKLALAFGLITTAPKD------VIRIAKNLRVCGDCHEAIKLISK 576
D+EEEEK+ + HSEKLAL FGL+ ++ VIRI KNLRVC DCH KL+SK
Sbjct: 635 DVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSK 694
Query: 577 ITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ REIIVRD RFHC+ G CSC+D+W
Sbjct: 695 VYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 110/244 (45%), Gaps = 5/244 (2%)
Query: 185 ARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACA 243
A VF +P + + ++ ++ + + P+ + + ++ + + ++ + +L A +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
+ AL G+ + L +P + T +DMYA CGR+ A VF EM +D V WN
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 304 VVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
++ G V AF +F +++ + P+ ++ C G + R + + +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL--IE 240
Query: 364 SLTPMIEH-YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
+ M H +V + +G +D A E + M + N V A+++G + D A+
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVSGYSKCGRLDDAQV 299
Query: 423 VLNQ 426
+ +Q
Sbjct: 300 IFDQ 303
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/600 (42%), Positives = 372/600 (62%), Gaps = 9/600 (1%)
Query: 14 AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLN 73
A+ ++SMR PT +FP +KAC+ D G ++H G D FV ++L+
Sbjct: 60 ALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIV 119
Query: 74 LYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL------HRGL 127
+Y CG L DA KVFD+IP +N+VSWT++I GY GN +A+++F+ LL +
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN--MEKA 185
DS +V V++AC+++ + IH +V + G R V V +L+D YAK G + A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP-EYYTMVGVLSACAS 244
R++FDQ+ +KD VS++S++ YA +G EA ++F + + + T+ VL A +
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
GAL +G + R + ++GT++IDMY KCGR+ A K F MK+K+ W A+
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM 359
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFS 364
++G M+G+ A +F + G++PN TFV +L C+HAGL EG ++FN+M F
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 365 LTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVL 424
+ P +EHYGCMVDLLGR+G L +A++LI+ M M+P++I+W +LLA CR+HK +LAE +
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISV 479
Query: 425 NQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEF 484
+L L+ N G Y+LLS+IY+ + +W D ++R +M ++G+ K G S +E++G VH F
Sbjct: 480 ARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVF 539
Query: 485 LVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAF 544
L+GD HP EKIY L EL KL AG+V T V D++EEEK+ L HSEKLA+AF
Sbjct: 540 LIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAF 599
Query: 545 GLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
G++ T P + + KNLRVC DCH IKLISKI RE +VRD RFH F +G CSC D+W
Sbjct: 600 GIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 200/393 (50%), Gaps = 27/393 (6%)
Query: 87 VFDDIPDK-NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
+F+ DK +V SW ++I+ G+ EA+ F + L P S + AC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D+ + K H G ++FV+++L+ +Y+ CG +E AR+VFD++P+++IVSW+SMI+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 206 GYASNGFPKEALDMFYNM------QRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
GY NG +A+ +F ++ + + + +V V+SAC+ + A L SF+
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 260 RNEFLSNPVLGTTLIDMYAKCGR--MAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
+ F +G TL+D YAK G +A A K+F ++ DKD+V +N+++S + +G A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 318 FGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
F VF +L K + N T +L +H+G + G+ + + R+ L + ++
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSII 329
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI--ALEPWN 434
D+ + G+++ A + M N W A++AG +H A + +I + P
Sbjct: 330 DMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP-- 386
Query: 435 SGNYVLLSNIYSA-SH--------KWNDAAKIR 458
NY+ ++ +A SH +W +A K R
Sbjct: 387 --NYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 487 bits (1254), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/605 (40%), Positives = 362/605 (59%), Gaps = 4/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPF-VLKACAREHDFQLGVRSHSLIVKA 59
MI G+ N+ + +I+ + + NE + T +L A A + +LG++ HSL K
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G ++V T ++LY CG + +F + ++V++ A+I GY + G E ++++F
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ L+ G + S ++V ++ G L IHGY ++ + V+T+L +Y+K
Sbjct: 311 KELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKL 367
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+E AR++FD+ PEK + SW++MI GY NG ++A+ +F MQ+ P T+ +L
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCIL 427
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SACA LGAL LG W + +F S+ + T LI MYAKCG +A+A ++F M K++V
Sbjct: 428 SACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV 487
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN ++SG ++G + A +F ++ GI P TF+ +L C+HAGLV EG + FNSM
Sbjct: 488 TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ P ++HY CMVD+LGR+G L A + I++M +EP + VW LL CR+HK T+L
Sbjct: 548 IHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNL 607
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A V +L L+P N G +VLLSNI+SA + AA +R + + K G + +E+
Sbjct: 608 ARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGE 667
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
H F GD SHP ++IY KL++L K++ AG+ P T+ L D+EEEE++ + HSE+
Sbjct: 668 TPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSER 727
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGLI T P IRI KNLRVC DCH KLISKIT R I+VRD NRFH F +G CS
Sbjct: 728 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCS 787
Query: 600 CKDFW 604
C D+W
Sbjct: 788 CGDYW 792
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 217/455 (47%), Gaps = 16/455 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++RGF N+ ++ + +R L P + T+ F + A + D + G H V
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G D + + ++++ +Y + DA KVFD +P+K+ + W +ISGY E+I +F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 120 RRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
R L++ + D+ +++ +L A +L +L IH + G + +V T + LY+K
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSK 268
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGV 238
CG ++ +F + + DIV++++MI GY SNG + +L +F + + T+V +
Sbjct: 269 CGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+ G L L + ++ FLS+ + T L +Y+K + A K+F E +K
Sbjct: 329 VPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
WNA++SG + NG + A +F +++K PN T +L C G + G+ + +
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK-WVHD 444
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
+ R I ++ + + G + EA L M + N + W +++G LH +
Sbjct: 445 LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISGYGLHGQ-- 501
Query: 419 LAEHVLNQLIALEPWNSG----NYVLLSNIYSASH 449
+ LN I E NSG L +Y+ SH
Sbjct: 502 -GQEALN--IFYEMLNSGITPTPVTFLCVLYACSH 533
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 174/365 (47%), Gaps = 13/365 (3%)
Query: 51 RSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEG 110
++H+ I+ G D + T L G + A +F + +V + ++ G+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 111 NLEEAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
+ ++++F L LKP+S + ++A + D + IHG G + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-L 228
+++V +Y K +E AR+VFD+MPEKD + W++MI GY N E++ +F ++ E+
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 229 KPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 288
+ + T++ +L A A L L LG+ S + S+ + T I +Y+KCG++
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
+FRE + D V +NA++ G + NG +++ +F +L G + +T V L+ H L
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 349 VDEGRQF---FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWG 405
+ + N +S T + Y + ++ DE+ E KS+P W
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE--KSLPS------WN 389
Query: 406 ALLAG 410
A+++G
Sbjct: 390 AMISG 394
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/674 (37%), Positives = 370/674 (54%), Gaps = 70/674 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I F +I ++ M + G +P + P + K CA F++G + H + +G
Sbjct: 87 LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG 146
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDK-------------------------- 94
LD D FV+ S+ ++Y+ CG + DA KVFD + DK
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 95 ---------NVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
N+VSW I+SG+ G +EA+ MF+++ H G PD ++ VL +
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSE 266
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNM----------------------- 182
L+ + IHGYV + G ++ V ++++D+Y K G++
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326
Query: 183 --------EKARRVFD----QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+KA +F+ Q E ++VSW+S+I G A NG EAL++F MQ +KP
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ T+ +L AC ++ AL G F R L N +G+ LIDMYAKCGR+ + VF
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
M K+ V WN++++G SM+G K +F L + ++P+ +F LL C GL D
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
EG ++F MS + + P +EHY CMV+LLGR+G+L EA++LIK MP EP++ VWGALL
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CRL DLAE +L LEP N G YVLLSNIY+A W + IR+ M G++K
Sbjct: 567 CRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP 626
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
GCSW++V V+ L GD SHP ++I K+DE++ +++ +G P D L D+EE+E++
Sbjct: 627 GCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQE 686
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L HSEKLA+ FGL+ T +++ KNLR+CGDCH IK IS GREI +RD NRF
Sbjct: 687 QMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRF 746
Query: 591 HCFIEGSCSCKDFW 604
H F +G CSC DFW
Sbjct: 747 HHFKDGICSCGDFW 760
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 185/450 (41%), Gaps = 74/450 (16%)
Query: 50 VRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINE 109
++H+ I+K+G D ++ L+ Y + DA V IPD + S++++I
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 110 GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA 169
++I +F R+ GL PDS + + C +L K IH +G + FV
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 170 TSLVDLYAKCGNMEKARRVFDQMPEKD--------------------------------- 196
S+ +Y +CG M AR+VFD+M +KD
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 197 --IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWA 254
IVSW+ ++ G+ +G+ KEA+ MF + P+ T+ VL + L +G
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 255 SSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYV 314
++ + L + + + +IDMY K G + +F + + + V NA ++GLS NG V
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 315 KV-----------------------------------AFGVFGQLEKCGIQPNGNTFVGL 339
A +F +++ G++PN T +
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 340 LCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPME 398
L C + + GR RV L + H G ++D+ + G+++ + + MP +
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 399 PNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
N + W +L+ G +H K + L+
Sbjct: 453 -NLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/607 (40%), Positives = 377/607 (62%), Gaps = 7/607 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ +N A+ + SMR + +F V+K CA + + + H +VK G
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLEEAINMF 119
D+ ++T+L+ Y C + DAL++F +I NVVSWTA+ISG++ EEA+++F
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLF 385
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G++P+ F+ +LTA + + +H V + R+ V T+L+D Y K
Sbjct: 386 SEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAYVKL 441
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E+A +VF + +KDIV+WS+M+ GYA G + A+ MF + + +KP +T +L
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Query: 240 SACASLGA-LELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
+ CA+ A + G F ++ S+ + + L+ MYAK G + A +VF+ ++KD
Sbjct: 502 NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V WN+++SG + +G A VF +++K ++ +G TF+G+ CTHAGLV+EG ++F+
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI 621
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M R + P EH CMVDL R+GQL++A ++I++MP + +W +LA CR+HKKT+
Sbjct: 622 MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTE 681
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L ++IA++P +S YVLLSN+Y+ S W + AK+R +M ++ ++K G SW+EV
Sbjct: 682 LGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVK 741
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
+ FL GD SHPL ++IY KL++L+T+LK G+ P T +VL DI++E K+ LA HSE
Sbjct: 742 NKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSE 801
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF-IEGS 597
+LA+AFGLI T + I KNLRVCGDCH IKLI+KI REI+VRD+NRFH F +G
Sbjct: 802 RLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGV 861
Query: 598 CSCKDFW 604
CSC DFW
Sbjct: 862 CSCGDFW 868
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 215/435 (49%), Gaps = 21/435 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ GF + Q A + ++ G F VLK A D G + H +K G
Sbjct: 64 LLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFG 123
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V TSL++ Y+ D KVFD++ ++NVV+WT +ISGY +E + +F
Sbjct: 124 FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFM 183
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ + G +P+SF+ L + G +H V + G + + V+ SL++LY KCG
Sbjct: 184 RMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCG 243
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ KAR +FD+ K +V+W+SMI GYA+NG EAL MFY+M+ ++ + V+
Sbjct: 244 NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIK 303
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CA+L L + + FL + + T L+ Y+KC M A ++F+E+ VV
Sbjct: 304 LCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVV 363
Query: 301 -WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGC-------THAGLVDEG 352
W A++SG N + A +F ++++ G++PN T+ +L HA +V
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTN 423
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
+ +++ ++D + G+++EA ++ + + + + W A+LAG
Sbjct: 424 YERSSTVGT------------ALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYA 470
Query: 413 LHKKTDLAEHVLNQL 427
+T+ A + +L
Sbjct: 471 QTGETEAAIKMFGEL 485
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 159/335 (47%), Gaps = 1/335 (0%)
Query: 76 VHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIV 135
V L +A +FD P ++ S+ +++ G+ +G +EA +F + G++ D
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 136 RVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
VL L D + +H + G +V V TSLVD Y K N + R+VFD+M E+
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
++V+W+++I GYA N E L +F MQ E +P +T L A G G+
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
+ + +N + +LI++Y KCG + +A +F + + K V WN+++SG + NG
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A G+F + ++ + ++F ++ C + + Q S+ + L M
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
V + LD A L K + N + W A+++G
Sbjct: 338 VAYSKCTAMLD-ALRLFKEIGCVGNVVSWTAMISG 371
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/604 (39%), Positives = 362/604 (59%), Gaps = 1/604 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ G+ N + A+E SM E P+ T VL A + +G H +++G
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + T+L+++Y CG L A ++FD + ++NVVSW ++I Y+ N +EA+ +F+
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L G+KP S++ L AC LGDL ++IH E G RNV V SL+ +Y KC
Sbjct: 327 KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK 386
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A +F ++ + +VSW++MI G+A NG P +AL+ F M+ +KP+ +T V V++
Sbjct: 387 EVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A A L W + R+ N + T L+DMYAKCG + A +F M ++
Sbjct: 447 AIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTT 506
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G +G+ K A +F +++K I+PNG TF+ ++ C+H+GLV+ G + F M
Sbjct: 507 WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK 566
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+S+ ++HYG MVDLLGR+G+L+EA + I MP++P V+GA+L C++HK + A
Sbjct: 567 ENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA 626
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +L L P + G +VLL+NIY A+ W ++R M +G++K GCS VE+
Sbjct: 627 EKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNE 686
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
VH F G +HP S+KIY+ L++L +K AG+VP T+ VL +E + K+ L+ HSEKL
Sbjct: 687 VHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKL 745
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A++FGL+ T I + KNLRVC DCH A K IS +TGREI+VRD RFH F G+CSC
Sbjct: 746 AISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSC 805
Query: 601 KDFW 604
D+W
Sbjct: 806 GDYW 809
Score = 249 bits (635), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 217/421 (51%), Gaps = 16/421 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
M++GF A++F+ MR + P + F ++LK C E + ++G H L+VK+G
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D F T L N+Y C + +A KVFD +P++++VSW I++GY G A+ M +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ LKP +IV VL A + L +S K IHGY +G V ++T+LVD+YAKCG
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E AR++FD M E+++VSW+SMI Y N PKEA+ +F M E +KP +++G L
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA LG LE G + N + +LI MY KC + A +F +++ + V
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS 405
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++ G + NG A F Q+ ++P+ T+V ++ + + +
Sbjct: 406 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 465
Query: 361 R------VFSLTPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
R VF T +++ Y C ++ R LI M E + W A++ G
Sbjct: 466 RSCLDKNVFVTTALVDMYAKCGAIMIAR---------LIFDMMSERHVTTWNAMIDGYGT 516
Query: 414 H 414
H
Sbjct: 517 H 517
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 195/356 (54%), Gaps = 2/356 (0%)
Query: 55 LIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEE 114
L+ K GL + F +T L++L+ G + +A +VF+ I K V + ++ G+ +L++
Sbjct: 59 LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDK 118
Query: 115 AINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVD 174
A+ F R+ + ++P ++ +L C +L K IHG + ++G ++F T L +
Sbjct: 119 ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 175 LYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYT 234
+YAKC + +AR+VFD+MPE+D+VSW++++ GY+ NG + AL+M +M ENLKP + T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 235 MVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK 294
+V VL A ++L + +G + R+ F S + T L+DMYAKCG + A ++F M
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+++ V WN+++ N K A +F ++ G++P + +G L C G ++ GR
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR- 357
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F + +S L + ++ + + ++D A + + + W A++ G
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL-QSRTLVSWNAMILG 412
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/605 (40%), Positives = 357/605 (59%), Gaps = 8/605 (1%)
Query: 2 IRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGL 61
+R F +I Y SM G P F+FPF+LK+CA G + H + K G
Sbjct: 25 LRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGC 84
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVS--WTAIISGYINEGNLEEAINMF 119
+ + FV T+L+++Y CG +ADA KVF++ P + +S + A+ISGY + +A MF
Sbjct: 85 ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMF 144
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
RR+ G+ DS +++ ++ CT L + +HG + G V V S + +Y KC
Sbjct: 145 RRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKC 204
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G++E RR+FD+MP K +++W+++I GY+ NG + L+++ M+ + P+ +T+V VL
Sbjct: 205 GSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVL 264
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
S+CA LGA ++G +E N F+ N + I MYA+CG +A+A VF M K V
Sbjct: 265 SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV 324
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
W A++ M+G ++ +F + K GI+P+G FV +L C+H+GL D+G + F +M
Sbjct: 325 SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 384
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R + L P EHY C+VDLLGR+G+LDEA E I+SMP+EP+ VWGALL C++HK D+
Sbjct: 385 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDM 444
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
AE ++I EP N G YVL+SNIYS S +IR MM ++ +K G S+VE G
Sbjct: 445 AELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG 504
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH FL GD SH +E+++ LDEL T + D EE HSE+
Sbjct: 505 RVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDR------GEEVSSTTREHSER 558
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFG++ + P I + KNLRVC DCH +K +SKI R+ +VRD +RFH F +G CS
Sbjct: 559 LAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCS 618
Query: 600 CKDFW 604
CKD+W
Sbjct: 619 CKDYW 623
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 195/405 (48%), Gaps = 12/405 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ +N A + M+ G + T ++ C LG H VK G
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
LD + V S + +Y+ CG + ++FD++P K +++W A+ISGY G + + ++
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G+ PD F++V VL++C LG + V G NVFV+ + + +YA+CG
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCG 306
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ KAR VFD MP K +VSW++MI Y +G + L +F +M + ++P+ V VLS
Sbjct: 307 NLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLS 366
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
AC+ G + G+ M+R L P + L+D+ + GR+ +A + M + D
Sbjct: 367 ACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG 426
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
VW A++ ++ V +A F ++ + +PN + L+ EG
Sbjct: 427 AVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRV 484
Query: 359 M--SRVFSLTP---MIEHYGCMVDLLG--RS-GQLDEAHELIKSM 395
M R F P +EH G + L RS Q +E H ++ +
Sbjct: 485 MMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 156/332 (46%), Gaps = 4/332 (1%)
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
W + + E+I+++R +L G PD+FS +L +C L + + +H +V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 159 EAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS--WSSMIQGYASNGFPKEA 216
+ G FV T+L+ +Y KCG + AR+VF++ P+ +S ++++I GY +N +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDM 276
MF M+ + + TM+G++ C L LG + S + + I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 277 YAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF 336
Y KCG + ++F EM K + WNAV+SG S NG ++ Q++ G+ P+ T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 337 VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMP 396
V +L C H G G + + P + + + R G L +A + MP
Sbjct: 261 VSVLSSCAHLGAKKIGHE-VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 397 MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
++ + + W A++ +H ++ + + +I
Sbjct: 320 VK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMI 350
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/574 (40%), Positives = 356/574 (62%), Gaps = 2/574 (0%)
Query: 33 FPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIP 92
+ +L AC + + G R H+ ++K +++T LL Y C L DA KV D++P
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
+KNVVSWTA+IS Y G+ EA+ +F ++ KP+ F+ VLT+C + L K
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IHG + + ++FV +SL+D+YAK G +++AR +F+ +PE+D+VS +++I GYA G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
+EAL+MF+ + E + P Y T +L+A + L L+ G A + R E VL +
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL-EKCGIQP 331
LIDMY+KCG ++ A ++F M ++ + WNA++ G S +G + +F + ++ ++P
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 332 NGNTFVGLLCGCTHAGLVDEGRQFFNSM-SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
+ T + +L GC+H + D G F+ M + + P EHYGC+VD+LGR+G++DEA E
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 391 LIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
IK MP +P A V G+LL CR+H D+ E V +LI +EP N+GNYV+LSN+Y+++ +
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474
Query: 451 WNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKA 510
W D +R+MM K + K G SW++ + +H F D +HP E++ +K+ E++ K+K
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Query: 511 AGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEA 570
AG+VP VL+D++EE+K+ L HSEKLAL FGLI T IR+ KNLR+C DCH
Sbjct: 535 AGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNF 594
Query: 571 IKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
K+ SK+ RE+ +RD NRFH ++G CSC D+W
Sbjct: 595 AKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 161/285 (56%), Gaps = 8/285 (2%)
Query: 17 FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYV 76
F MR++G P FTF VL +C R LG + H LIVK D FV +SLL++Y
Sbjct: 141 FAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYA 199
Query: 77 HCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVR 136
G + +A ++F+ +P+++VVS TAII+GY G EEA+ MF RL G+ P+ +
Sbjct: 200 KAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYAS 259
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKD 196
+LTA + L L K H +V + SL+D+Y+KCGN+ ARR+FD MPE+
Sbjct: 260 LLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERT 319
Query: 197 IVSWSSMIQGYASNGFPKEALDMFYNMQREN-LKPEYYTMVGVLSACASLGALELGVWAS 255
+SW++M+ GY+ +G +E L++F M+ E +KP+ T++ VLS C+ + G+
Sbjct: 320 AISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIF 379
Query: 256 SFMERNEFLSNPVLGTT----LIDMYAKCGRMAQACKVFREMKDK 296
M E+ + P GT ++DM + GR+ +A + + M K
Sbjct: 380 DGMVAGEYGTKP--GTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + A+E ++ + +EG P T+ +L A + G ++H +++
Sbjct: 225 IIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L ++ SL+++Y CG L+ A ++FD++P++ +SW A++ GY G E + +FR
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 121 RLL-HRGLKPDSFSIVRVLTACT--QLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+ + +KPD+ +++ VL+ C+ ++ D + E G +VD+
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLG 404
Query: 178 KCGNMEKARRVFDQMPEK 195
+ G +++A +MP K
Sbjct: 405 RAGRIDEAFEFIKRMPSK 422
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/603 (38%), Positives = 357/603 (59%), Gaps = 38/603 (6%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHC---GYLADALKVFDDIPD 93
L+ C+++ + + + H+ ++K GL D + T L+ + +L A VFD
Sbjct: 21 LQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 94 KNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWI 153
+ W +I G+ E ++ +++R+L ++++ +L AC+ L I
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 154 HGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG-- 211
H + + G +V+ SL++ YA GN + A +FD++PE D VSW+S+I+GY G
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 212 -----------------------------FPKEALDMFYNMQRENLKPEYYTMVGVLSAC 242
KEAL +F+ MQ +++P+ ++ LSAC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 243 ASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWN 302
A LGALE G W S++ + + VLG LIDMYAKCG M +A +VF+ +K K W
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 303 AVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV 362
A++SG + +G+ + A F +++K GI+PN TF +L C++ GLV+EG+ F SM R
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 363 FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEH 422
++L P IEHYGC+VDLLGR+G LDEA I+ MP++PNA++WGALL CR+HK +L E
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Query: 423 VLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVH 482
+ LIA++P++ G YV +NI++ KW+ AA+ R +M ++G+ K+ GCS + ++G H
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497
Query: 483 EFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFD-IEEEEKQYFLACHSEKLA 541
EFL GD SHP EKI SK + KL+ G+VP + +L D ++++E++ + HSEKLA
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLA 557
Query: 542 LAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCK 601
+ +GLI T P +IRI KNLRVC DCH+ KLISKI R+I++RD RFH F +G CSC
Sbjct: 558 ITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCG 617
Query: 602 DFW 604
D+W
Sbjct: 618 DYW 620
Score = 185 bits (469), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 176/349 (50%), Gaps = 33/349 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRGF +D + ++ Y M +TFP +LKAC+ F+ + H+ I K G
Sbjct: 86 MIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D + SL+N Y G A +FD IP+ + VSW ++I GY+ G ++ A+ +FR
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 121 RLLHRG-------------------------------LKPDSFSIVRVLTACTQLGDLST 149
++ + ++PD+ S+ L+AC QLG L
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
KWIH Y+N+ + + L+D+YAKCG ME+A VF + +K + +W+++I GYA
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
+G +EA+ F MQ+ +KP T VL+AC+ G +E G MER+ L +
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 270 GT-TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSMNGYVKV 316
++D+ + G + +A + +EM K + V+W A++ ++ +++
Sbjct: 386 HYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 434
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/599 (39%), Positives = 369/599 (61%), Gaps = 9/599 (1%)
Query: 10 CFQH----AIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
C+Q A++ +S+++ G + T+ ++K C G + G
Sbjct: 37 CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96
Query: 66 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
F+ L+N+YV L DA ++FD +P +NV+SWT +IS Y ++A+ + +L
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
++P+ ++ VL +C + D+ + +H + + G +VFV ++L+D++AK G E A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
VFD+M D + W+S+I G+A N AL++F M+R E T+ VL AC L
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
LELG+ A + + + + +L L+DMY KCG + A +VF +MK++D + W+ ++
Sbjct: 274 ALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMI 331
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
SGL+ NGY + A +F +++ G +PN T VG+L C+HAGL+++G +F SM +++ +
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLN 425
P+ EHYGCM+DLLG++G+LD+A +L+ M EP+A+ W LL CR+ + LAE+
Sbjct: 392 DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAK 451
Query: 426 QLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFL 485
++IAL+P ++G Y LLSNIY+ S KW+ +IR+ M D+GI+K GCSW+EV+ +H F+
Sbjct: 452 KVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFI 511
Query: 486 VGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFG 545
+GDNSHP ++ KL++L +L G+VP T+ VL D+E E+ + L HSEKLALAFG
Sbjct: 512 IGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFG 571
Query: 546 LITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
L+T + VIRI KNLR+CGDCH KL SK+ R I++RD R+H F +G CSC D+W
Sbjct: 572 LMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 168/310 (54%), Gaps = 9/310 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + Q A+E M + P +T+ VL++C D ++ H I+K G
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEG 189
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+++L++++ G DAL VFD++ + + W +II G+ + A+ +F+
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G + ++ VL ACT L L + +V+ +++ + +LVD+Y KCG
Sbjct: 250 RMKRAGFIAEQATLTSVLRACTGLALLELG--MQAHVHIVKYDQDLILNNALVDMYCKCG 307
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A RVF+QM E+D+++WS+MI G A NG+ +EAL +F M+ KP Y T+VGVL
Sbjct: 308 SLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMK-DKD 297
AC+ G LE G W + + +PV +ID+ K G++ A K+ EM+ + D
Sbjct: 368 ACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 426
Query: 298 QVVWNAVVSG 307
V W ++
Sbjct: 427 AVTWRTLLGA 436
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/607 (40%), Positives = 369/607 (60%), Gaps = 8/607 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + A+ N +R + T +L AC DF GV HS +K G
Sbjct: 222 MISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGY-INEGNLEEAINMF 119
L+ + FV L++LY G L D KVFD + ++++SW +II Y +NE L AI++F
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR-AISLF 336
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKG-RNVFVATSLVDLYAK 178
+ + ++PD +++ + + +QLGD+ + + G+ G ++ + ++V +YAK
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVG 237
G ++ AR VF+ +P D++SW+++I GYA NGF EA++M+ M+ E + T V
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 238 VLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKD 297
VL AC+ GAL G+ + +N + + T+L DMY KCGR+ A +F ++ +
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFN 357
V WN +++ +G+ + A +F ++ G++P+ TFV LL C+H+GLVDEG+ F
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 358 SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
M + +TP ++HYGCMVD+ GR+GQL+ A + IKSM ++P+A +WGALL+ CR+H
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636
Query: 418 DLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEV 477
DL + L +EP + G +VLLSN+Y+++ KW +IRS+ KG++K G S +EV
Sbjct: 637 DLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEV 696
Query: 478 DGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHS 537
D V F G+ +HP+ E++Y +L L KLK G+VP VL D+E++EK++ L HS
Sbjct: 697 DNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHS 756
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
E+LA+AF LI T K IRI KNLRVCGDCH K ISKIT REIIVRD+NRFH F G
Sbjct: 757 ERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGV 816
Query: 598 CSCKDFW 604
CSC D+W
Sbjct: 817 CSCGDYW 823
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 221/417 (52%), Gaps = 25/417 (5%)
Query: 21 MRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY 80
M + G P TFP VLKAC D G + H L +K G D +V SL++LY
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 81 LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP-DSFSIVRVLT 139
+ +A +FD++P +++ SW A+ISGY GN +EA+ L GL+ DS ++V +L+
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLS 255
Query: 140 ACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 199
ACT+ GD + IH Y + G +FV+ L+DLYA+ G + ++VFD+M +D++S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSF-M 258
W+S+I+ Y N P A+ +F M+ ++P+ T++ + S + LG + F +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 259 ERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ FL + +G ++ MYAK G + A VF + + D + WN ++SG + NG+ A
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 319 GVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR------VFSLTPMIEH 371
++ +E+ G I N T+V +L C+ AG + +G + + + VF +T
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS---- 491
Query: 372 YGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+ D+ G+ G+L++A L +P N++ W L+A H + A + +++
Sbjct: 492 ---LADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 166/345 (48%), Gaps = 9/345 (2%)
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR-LLHR 125
+ L+NLY + G +A A FD I +++V +W +ISGY GN E I F +L
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
GL PD + VL AC + D IH + G +V+VA SL+ LY++ + A
Sbjct: 148 GLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
R +FD+MP +D+ SW++MI GY +G KEAL + ++ + T+V +LSAC
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEA 260
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
G GV S+ ++ S + LID+YA+ GR+ KVF M +D + WN+++
Sbjct: 261 GDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSII 320
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
+N A +F ++ IQP+ T + L + G + R R
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380
Query: 366 TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
I +V + + G +D A + +P + I W +++G
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIISG 424
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 12/273 (4%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
+L +AK +H + + + +NV ++ LV+LY GN+ AR FD + +D+ +W+ MI
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 206 GYASNGFPKEALDMF-YNMQRENLKPEYYTMVGVLSACAS-LGALELGVWASSFMERNEF 263
GY G E + F M L P+Y T VL AC + + ++ A F F
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKF----GF 181
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ + + +LI +Y++ + A +F EM +D WNA++SG +G K A +
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG 241
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
L + T V LL CT AG + G +S S L + ++DL G
Sbjct: 242 LRAM----DSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKK 416
+L + ++ M + + I W +++ L+++
Sbjct: 297 RLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQ 328
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/639 (38%), Positives = 373/639 (58%), Gaps = 48/639 (7%)
Query: 14 AIEFYNSMRNE-GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+E ++ M NE G P N T VL CA LG + H V + + + FV L+
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF------------- 119
++Y CG + +A VF ++ K+VVSW A+++GY G E+A+ +F
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 120 ----------------------RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY- 156
R++L G+KP+ +++ VL+ C +G L K IH Y
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 157 ------VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMP--EKDIVSWSSMIQGYA 208
+ + G G V L+D+YAKC ++ AR +FD + E+D+V+W+ MI GY+
Sbjct: 392 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 209 SNGFPKEALDMFYNMQREN--LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
+G +AL++ M E+ +P +T+ L ACASL AL +G ++ RN+ +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 267 PV-LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
P+ + LIDMYAKCG ++ A VF M K++V W ++++G M+GY + A G+F ++
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
+ G + +G T + +L C+H+G++D+G ++FN M VF ++P EHY C+VDLLGR+G+L
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 386 DEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIY 445
+ A LI+ MPMEP +VW A L+ CR+H K +L E+ ++ L + G+Y LLSN+Y
Sbjct: 632 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Query: 446 SASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELA 505
+ + +W D +IRS+M KG++K GCSWVE F VGD +HP +++IY L +
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 751
Query: 506 TKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCG 565
++K G+VP T L D+++EEK L HSEKLALA+G++TT IRI KNLRVCG
Sbjct: 752 QRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCG 811
Query: 566 DCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
DCH A +S+I +II+RD++RFH F GSCSCK +W
Sbjct: 812 DCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 238/496 (47%), Gaps = 49/496 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR + N C + + M + + P N+TFPFV KAC + G +H+L + G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +L+ +Y C L+DA KVFD++ +VVSW +II Y G + A+ MF
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 121 RLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ + G +PD+ ++V VL C LG S K +H + + +N+FV LVD+YAKC
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN------------ 227
G M++A VF M KD+VSW++M+ GY+ G ++A+ +F MQ E
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 228 -----------------------LKPEYYTMVGVLSACASLGAL----ELGVWASSF--- 257
+KP T++ VLS CAS+GAL E+ +A +
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 258 MERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREM--KDKDQVVWNAVVSGLSMNGYVK 315
+ +N ++ LIDMYAKC ++ A +F + K++D V W ++ G S +G
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 316 VAFGVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
A + ++ E C +PN T L C + G+Q R +
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPW 433
C++D+ + G + +A + +M M N + W +L+ G +H + A + +++ + +
Sbjct: 518 CLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG-F 575
Query: 434 NSGNYVLLSNIYSASH 449
LL +Y+ SH
Sbjct: 576 KLDGVTLLVVLYACSH 591
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 194/407 (47%), Gaps = 47/407 (11%)
Query: 67 VKTSLLNLYVHCGYLADALKVFDDIP--DKNVVSWTAIISGYINEGNLEEAINMFRRLLH 124
+ + L++ Y+ G L+ A+ + P D V W ++I Y + G + + +F +
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 125 RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEK 184
PD+++ V AC ++ + + H G NVFV +LV +Y++C ++
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACA 243
AR+VFD+M D+VSW+S+I+ YA G PK AL+MF M E +P+ T+V VL CA
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 244 SLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNA 303
SLG LG F +E + N +G L+DMYAKCG M +A VF M KD V WNA
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 304 VVSGLS------------------------------MNGYVKV-----AFGVFGQLEKCG 328
+V+G S ++GY + A GV Q+ G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 329 IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG-------CMVDLLGR 381
I+PN T + +L GC G + G++ + + + + +G ++D+ +
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKE-IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAK 419
Query: 382 SGQLDEAHELIKSM-PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL 427
++D A + S+ P E + + W ++ G H + A +L+++
Sbjct: 420 CKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 132/307 (42%), Gaps = 53/307 (17%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MI G+ + A+E + M E P FT L ACA ++G + H+ ++
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 59 AGLDCDE-FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
+ FV L+++Y CG ++DA VFD++ KN V+WT++++GY G EEA+
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS------ 171
+F + G K D +++ VL AC+ G + Y N + + VF +
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM---EYFN---RMKTVFGVSPGPEHYA 619
Query: 172 -LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
LVDL + G + A R+ ++MP ++P
Sbjct: 620 CLVDLLGRAGRLNAALRLIEEMP----------------------------------MEP 645
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLI-DMYAKCGRMAQACKV 289
V LS C G +ELG +A+ + E SN TL+ ++YA GR ++
Sbjct: 646 PPVVWVAFLSCCRIHGKVELGEYAAE--KITELASNHDGSYTLLSNLYANAGRWKDVTRI 703
Query: 290 FREMKDK 296
M+ K
Sbjct: 704 RSLMRHK 710
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/637 (37%), Positives = 381/637 (59%), Gaps = 33/637 (5%)
Query: 1 MIRGFVSNDCFQHAIE-FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+ D + A++ F+ +R+E P + T V+ ACA+ D + G + ++ I +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
G++ ++ + ++L+++Y+ C + A ++FD+ N+ A+ S Y+ +G EA+ +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++ G++PD S++ +++C+QL ++ K HGYV G + +L+D+Y KC
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNG-----------FPK-------------- 214
+ A R+FD+M K +V+W+S++ GY NG P+
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 215 ------EALDMFYNMQ-RENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
EA+++F +MQ +E + + TM+ + SAC LGAL+L W ++E+N +
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 505
Query: 268 VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKC 327
LGTTL+DM+++CG A +F + ++D W A + ++M G + A +F + +
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
Query: 328 GIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDE 387
G++P+G FVG L C+H GLV +G++ F SM ++ ++P HYGCMVDLLGR+G L+E
Sbjct: 566 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 625
Query: 388 AHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
A +LI+ MPMEPN ++W +LLA CR+ ++A + ++ L P +G+YVLLSN+Y++
Sbjct: 626 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 685
Query: 448 SHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATK 507
+ +WND AK+R M +KG++K G S +++ G HEF GD SHP I + LDE++ +
Sbjct: 686 AGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745
Query: 508 LKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDC 567
G VP +VL D++E+EK + L+ HSEKLA+A+GLI++ IRI KNLRVC DC
Sbjct: 746 ASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDC 805
Query: 568 HEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
H K SK+ REII+RDNNRFH +G CSC DFW
Sbjct: 806 HSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 199/360 (55%), Gaps = 5/360 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ S+ AI + M N G P +TFPF L ACA+ G++ H LIVK G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV+ SL++ Y CG L A KVFD++ ++NVVSWT++I GY ++A+++F
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 121 RLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R++ + P+S ++V V++AC +L DL T + ++ ++ +G N + ++LVD+Y KC
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
++ A+R+FD+ ++ ++M Y G +EAL +F M ++P+ +M+ +
Sbjct: 285 NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI 344
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
S+C+ L + G ++ RN F S + LIDMY KC R A ++F M +K V
Sbjct: 345 SSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVV 404
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WN++V+G NG V A+ F + + N ++ ++ G L +E + F SM
Sbjct: 405 TWNSIVAGYVENGEVDAAWETFETMP----EKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 204/412 (49%), Gaps = 39/412 (9%)
Query: 34 PFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGY---LADALKVFDD 90
P LK C + ++ RS + K GLD D T L+ G L+ A +VF++
Sbjct: 36 PSSLKNCKTIDELKMFHRS---LTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 91 IPDKNV-VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
+ ++I GY + G EAI +F R+++ G+ PD ++ L+AC +
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
IHG + + G +++FV SLV YA+CG ++ AR+VFD+M E+++VSW+SMI GYA
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 210 NGFPKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPV 268
F K+A+D+F+ M R E + P TMV V+SACA L LE G +F+ + N +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 269 LGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG 328
+ + L+DMY KC + A ++F E + + NA+ S G + A GVF + G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 329 IQPNGNTFVGLLCGCT-----------HAGLVDEGRQFFNSMS----------------- 360
++P+ + + + C+ H ++ G + ++++
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 361 RVFSL--TPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
R+F + + +V +G++D A E ++MP E N + W +++G
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNIVSWNTIISG 443
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/604 (39%), Positives = 364/604 (60%), Gaps = 52/604 (8%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLY----VHCGYLADALKVFDDIPDKNVVSWTAIISGYI- 107
H++ +K+G D +L +H L A K+F+ +P +N SW II G+
Sbjct: 43 HAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSE 102
Query: 108 -NEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRN 165
+E AI +F ++ ++P+ F+ VL AC + G + K IHG + G G +
Sbjct: 103 SDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGD 162
Query: 166 VFVATSLVDLYAKCGNMEKAR--------------------------------------- 186
FV ++LV +Y CG M+ AR
Sbjct: 163 EFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLG 222
Query: 187 ------RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+FD+M ++ +VSW++MI GY+ NGF K+A+++F M++ +++P Y T+V VL
Sbjct: 223 DCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLP 282
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A + LG+LELG W + E + + VLG+ LIDMY+KCG + +A VF + ++ +
Sbjct: 283 AISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVIT 342
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W+A+++G +++G A F ++ + G++P+ ++ LL C+H GLV+EGR++F+ M
Sbjct: 343 WSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMV 402
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V L P IEHYGCMVDLLGRSG LDEA E I +MP++P+ ++W ALL CR+ ++
Sbjct: 403 SVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMG 462
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
+ V N L+ + P +SG YV LSN+Y++ W++ +++R M +K I+K GCS +++DGV
Sbjct: 463 KRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGV 522
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+HEF+V D+SHP +++I S L E++ KL+ AG+ P T VL ++EEE+K+ L HSEK+
Sbjct: 523 LHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKI 582
Query: 541 ALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSC 600
A AFGLI+T+P IRI KNLR+C DCH +IKLISK+ R+I VRD RFH F +GSCSC
Sbjct: 583 ATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSC 642
Query: 601 KDFW 604
D+W
Sbjct: 643 MDYW 646
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 187/367 (50%), Gaps = 50/367 (13%)
Query: 1 MIRGFVSNDCFQHAIE---FYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIV 57
+IRGF +D + I FY M +E P FTFP VLKACA+ Q G + H L +
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLAD---------------------------------- 83
K G DEFV ++L+ +YV CG++ D
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 84 -----------ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 132
A +FD + ++VVSW +ISGY G ++A+ +FR + ++P+
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275
Query: 133 SIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
++V VL A ++LG L +W+H Y ++G + + ++L+D+Y+KCG +EKA VF+++
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGV 252
P +++++WS+MI G+A +G +A+D F M++ ++P + +L+AC+ G +E G
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 253 WASSFMERNEFLSNPVLGT-TLIDMYAKCGRMAQACKVFREMKDK-DQVVWNAVVSGLSM 310
S M + L + ++D+ + G + +A + M K D V+W A++ M
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRM 455
Query: 311 NGYVKVA 317
G V++
Sbjct: 456 QGNVEMG 462
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 136/302 (45%), Gaps = 44/302 (14%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ N F+ A+E + M+ P T VL A +R +LG H +G
Sbjct: 245 MISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSG 304
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D+ + ++L+++Y CG + A+ VF+ +P +NV++W+A+I+G+ G +AI+ F
Sbjct: 305 IRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G++P + + +LTAC+ HG G
Sbjct: 365 KMRQAGVRPSDVAYINLLTACS-----------HG------------------------G 389
Query: 181 NMEKARRVFDQMPEKD-----IVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
+E+ RR F QM D I + M+ +G EA + NM +KP+
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP---IKPDDVIW 446
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
+L AC G +E+G ++ + + + L +MYA G ++ ++ MK+
Sbjct: 447 KALLGACRMQGNVEMGKRVANIL-MDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKE 505
Query: 296 KD 297
KD
Sbjct: 506 KD 507
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 65/333 (19%)
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG----NMEKARRVFDQMP 193
+ C + DLS IH ++G+ R+ A ++ A +++ A ++F+QMP
Sbjct: 30 INNCRTIRDLSQ---IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 194 EKDIVSWSSMIQGYASNGFPKE--ALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALEL 250
+++ SW+++I+G++ + K A+ +FY M E ++P +T VL ACA G ++
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA------------------------ 286
G + F + + + L+ MY CG M A
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 287 -----------------CK----VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
CK +F +M+ + V WN ++SG S+NG+ K A VF +++
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF----NSMSRVFSLTPMIEHYGCMVDLLGR 381
K I+PN T V +L + G ++ G +S R+ + ++D+ +
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG-----SALIDMYSK 321
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
G +++A + + +P E N I W A++ G +H
Sbjct: 322 CGIIEKAIHVFERLPRE-NVITWSAMINGFAIH 353
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/609 (38%), Positives = 351/609 (57%), Gaps = 38/609 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIR +V+N + ++ + +M P ++TFP VLKAC+ +G + H K G
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L FV L+++Y CG+L++A V D++ ++VVSW +++ GY ++A+ + R
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ + D+ ++ +L A +
Sbjct: 231 EMESVKISHDAGTMASLLPAVSN---------------------------------TTTE 257
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N+ + +F +M +K +VSW+ MI Y N P EA++++ M+ + +P+ ++ VL
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC AL LG ++ER + + N +L LIDMYAKCG + +A VF MK +D V
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W A++S +G A +F +L+ G+ P+ FV L C+HAGL++EGR F M+
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ +TP +EH CMVDLLGR+G++ EA+ I+ M MEPN VWGALL CR+H TD+
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIG 497
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
++L L P SG YVLLSNIY+ + +W + IR++M KG++K G S VEV+ +
Sbjct: 498 LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRI 557
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKL 540
+H FLVGD SHP S++IY +LD L K+K G+VP ++ L D+EEE+K+ LA HSEKL
Sbjct: 558 IHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKL 617
Query: 541 ALAFGLITTAPKD-----VIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
A+ F L+ T ++ IRI KNLR+CGDCH A KLIS+IT REII+RD NRFH F
Sbjct: 618 AIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRF 677
Query: 596 GSCSCKDFW 604
G CSC D+W
Sbjct: 678 GVCSCGDYW 686
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 6/269 (2%)
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D+ T + +H + N + L+ YA ++ AR+VFD++PE++++ + MI+
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
Y +NGF E + +F M N++P++YT VL AC+ G + +G + S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
+G L+ MY KCG +++A V EM +D V WN++V G + N A V ++E
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 326 KCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQL 385
I + T LL ++ E + M ++ + M+ + ++
Sbjct: 234 SVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS-WNVMIGVYMKNAMP 290
Query: 386 DEAHELIKSMP---MEPNAIVWGALLAGC 411
EA EL M EP+A+ ++L C
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPAC 319
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/605 (38%), Positives = 352/605 (58%), Gaps = 1/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ + + +I + MR G P++FTF VLKA HDF LG + H+L V G
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG 280
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V +L+ Y + + +FD++P+ + VS+ +IS Y E +++ FR
Sbjct: 281 FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ G +F +L+ L L + +H A + V SLVD+YAKC
Sbjct: 341 EMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCE 400
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
E+A +F +P++ VSW+++I GY G L +F M+ NL+ + T VL
Sbjct: 401 MFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLK 460
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
A AS +L LG +F+ R+ L N G+ L+DMYAKCG + A +VF EM D++ V
Sbjct: 461 ASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
WNA++S + NG + A G F ++ + G+QP+ + +G+L C+H G V++G ++F +MS
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS 580
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
++ +TP +HY CM+DLLGR+G+ EA +L+ MP EP+ I+W ++L CR+HK LA
Sbjct: 581 PIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLA 640
Query: 421 EHVLNQLIALEPW-NSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
E +L ++E ++ YV +SNIY+A+ +W ++ M ++GI+K+ SWVEV+
Sbjct: 641 ERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNH 700
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F D +HP ++I K++EL +++ G+ P T V+ D++E+ K L HSE+
Sbjct: 701 KIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSER 760
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AF LI+T I + KNLR C DCH AIKLISKI REI VRD +RFH F EG CS
Sbjct: 761 LAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCS 820
Query: 600 CKDFW 604
C D+W
Sbjct: 821 CGDYW 825
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 197/412 (47%), Gaps = 10/412 (2%)
Query: 5 FVSNDCFQHAIEFYNSM--RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLD 62
+ N F A + + M + LP + TF +L C + H+ VK G D
Sbjct: 120 YARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179
Query: 63 CDEFVKTS--LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ F+ S LL Y L A +F++IP+K+ V++ +I+GY +G E+I++F
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ G +P F+ VL A L D + + +H G R+ V ++D Y+K
Sbjct: 240 KMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHD 299
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + R +FD+MPE D VS++ +I Y+ + +L F MQ + +LS
Sbjct: 300 RVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLS 359
Query: 241 ACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
A+L +L++G + + + + + + +G +L+DMYAKC +A +F+ + +
Sbjct: 360 IAANLSSLQMGRQLHCQALLATADSILH--VGNSLVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 299 VVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W A++SG G +F ++ ++ + +TF +L + G+Q
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF 477
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ R +L + G +VD+ + G + +A ++ + MP + NA+ W AL++
Sbjct: 478 IIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 164/346 (47%), Gaps = 8/346 (2%)
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG--L 127
++++ +V G ++ A +FD +PD+ VV+WT ++ Y + +EA +FR++
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCT 143
Query: 128 KPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS--LVDLYAKCGNMEKA 185
PD + +L C + +H + + G N F+ S L+ Y + ++ A
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+F+++PEKD V+++++I GY +G E++ +F M++ +P +T GVL A L
Sbjct: 204 CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGL 263
Query: 246 GALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVV 305
LG + F + +G ++D Y+K R+ + +F EM + D V +N V+
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 306 SGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSL 365
S S + + F +++ G F +L + + GRQ + +
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLAT 381
Query: 366 TPMIEHYG-CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
I H G +VD+ + +EA + KS+P + + W AL++G
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISG 426
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 8/224 (3%)
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R++ G D+ ++ + G +S A+ ++ + +N +++ + K G
Sbjct: 38 RIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPH----KNTVSTNTMISGHVKTG 93
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN--LKPEYYTMVGV 238
++ AR +FD MP++ +V+W+ ++ YA N EA +F M R + P++ T +
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 239 LSACASLGALELGVWASSFMERNEFLSNPVLGTT--LIDMYAKCGRMAQACKVFREMKDK 296
L C +F + F +NP L + L+ Y + R+ AC +F E+ +K
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLL 340
D V +N +++G +G + +F ++ + G QP+ TF G+L
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/536 (41%), Positives = 345/536 (64%), Gaps = 8/536 (1%)
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+++ Y G + +A ++FD+ P ++V +WTA++SGYI +EEA +F ++ R
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER--- 310
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
+ S +L Q + AK + + RNV +++ YA+CG + +A+ +
Sbjct: 311 -NEVSWNAMLAGYVQGERMEMAKELFDVM----PCRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
FD+MP++D VSW++MI GY+ +G EAL +F M+RE + + LS CA + AL
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL 425
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
ELG + + + + +G L+ MY KCG + +A +F+EM KD V WN +++G
Sbjct: 426 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
S +G+ +VA F +++ G++P+ T V +L C+H GLVD+GRQ+F +M++ + + P
Sbjct: 486 SRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
+HY CMVDLLGR+G L++AH L+K+MP EP+A +WG LL R+H T+LAE +++
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 605
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
A+EP NSG YVLLSN+Y++S +W D K+R M DKG++K+ G SW+E+ H F VGD
Sbjct: 606 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 665
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
HP ++I++ L+EL ++K AG+V T VL D+EEEEK+ + HSE+LA+A+G++
Sbjct: 666 EFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMR 725
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+ IR+ KNLRVC DCH AIK +++ITGR II+RDNNRFH F +GSCSC D+W
Sbjct: 726 VSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 199/428 (46%), Gaps = 54/428 (12%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G++ N F+ A + ++ M + N ++K R + LG +
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNV----MIKGYVRNRN--LGKARELFEIMPE 154
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + ++L+ Y G + DA VFD +P+KN VSW A++S Y+ +EEA +F+
Sbjct: 155 RDVCSW--NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK 212
Query: 121 RLLHRGLKPDSFSIVR---VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+++++V +L + + A+ +N R+V +++ YA
Sbjct: 213 -------SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNV----RDVVSWNTIITGYA 261
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
+ G +++AR++FD+ P +D+ +W++M+ GY N +EA ++F M N
Sbjct: 262 QSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE--------- 312
Query: 238 VLSACASLGALELGVWASSFMERNEFL------SNPVLGTTLIDMYAKCGRMAQACKVFR 291
S A+ G ME + L N T+I YA+CG++++A +F
Sbjct: 313 -----VSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFD 367
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
+M +D V W A+++G S +G+ A +F Q+E+ G + N ++F L C ++
Sbjct: 368 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 427
Query: 352 GRQFFNSMSRVFSLTPMIEHYGCMVD-----LLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
G+Q + + T GC V + + G ++EA++L K M + + + W
Sbjct: 428 GKQLHGRLVKGGYET------GCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNT 480
Query: 407 LLAGCRLH 414
++AG H
Sbjct: 481 MIAGYSRH 488
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 163/344 (47%), Gaps = 36/344 (10%)
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
++ Y+ G +AL+VF +P + VS+ +ISGY+ G E A +F + R D
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DL 126
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
S ++ + +L A+ + + E R+V +++ YA+ G ++ AR VFD+
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPE----RDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
MPEK+ VSW++++ Y N +EA +F + REN ++S LG
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKS--RENW--------ALVSWNCLLGGF--- 229
Query: 252 VWASSFMERNEF-----LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
V +E +F + + V T+I YA+ G++ +A ++F E +D W A+VS
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G N V+ A +F ++ + N ++ +L G ++ ++ F+ M
Sbjct: 290 GYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMP-----C 340
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+ + M+ + G++ EA L MP + + + W A++AG
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 5/232 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A+ + M EG +F L CA +LG + H +VK G
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ FV +LL +Y CG + +A +F ++ K++VSW +I+GY G E A+ F
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAK-WIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ GLKPD ++V VL+AC+ G + + + + + G N +VDL +
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559
Query: 180 GNMEKARRVFDQMP-EKDIVSWSSMIQGYASNG---FPKEALDMFYNMQREN 227
G +E A + MP E D W +++ +G + A D + M+ EN
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN 611
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
+ Y + G +A RVF +MP VS++ MI GY NG + A +F M +L +
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL-VSW 129
Query: 233 YTMVGVLSACASLG-ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFR 291
M+ +LG A EL M + S T++ YA+ G + A VF
Sbjct: 130 NVMIKGYVRNRNLGKAREL----FEIMPERDVCS----WNTMLSGYAQNGCVDDARSVFD 181
Query: 292 EMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDE 351
M +K+ V WNA++S N ++ A +F E + ++ LL G + E
Sbjct: 182 RMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVE 237
Query: 352 GRQFFNSMS--RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
RQFF+SM+ V S +I Y +SG++DEA +L P++ + W A+++
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGY-------AQSGKIDEARQLFDESPVQ-DVFTWTAMVS 289
Query: 410 GCRLHKKTDLAEHVLNQL 427
G ++ + A + +++
Sbjct: 290 GYIQNRMVEEARELFDKM 307
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/580 (38%), Positives = 352/580 (60%), Gaps = 2/580 (0%)
Query: 26 FLPTNFTF-PFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA 84
++P + F +LK C G H+ I+++ D + +LLN+Y CG L +A
Sbjct: 55 YIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEA 114
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQL 144
KVF+ +P ++ V+WT +ISGY +A+ F ++L G P+ F++ V+ A
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 145 GDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMI 204
+HG+ + G NV V ++L+DLY + G M+ A+ VFD + ++ VSW+++I
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 205 QGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
G+A ++AL++F M R+ +P +++ + AC+S G LE G W ++M ++
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 324
G TL+DMYAK G + A K+F + +D V WN++++ + +G+ K A F ++
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 325 EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQ 384
+ GI+PN +F+ +L C+H+GL+DEG ++ M + + P HY +VDLLGR+G
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGD 413
Query: 385 LDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNI 444
L+ A I+ MP+EP A +W ALL CR+HK T+L + + L+P + G +V+L NI
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 473
Query: 445 YSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDEL 504
Y++ +WNDAA++R M + G++K CSWVE++ +H F+ D HP E+I K +E+
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEV 533
Query: 505 ATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVC 564
K+K G+VP T HV+ ++++E++ L HSEK+ALAF L+ T P I I KN+RVC
Sbjct: 534 LAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVC 593
Query: 565 GDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
GDCH AIKL SK+ GREIIVRD NRFH F +G+CSCKD+W
Sbjct: 594 GDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 174/312 (55%), Gaps = 1/312 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G+ +D A+ F+N M G+ P FT V+KA A E G + H VK G
Sbjct: 132 LISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 191
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + V ++LL+LY G + DA VFD + +N VSW A+I+G+ E+A+ +F+
Sbjct: 192 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQ 251
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+L G +P FS + AC+ G L KW+H Y+ ++G+ F +L+D+YAK G
Sbjct: 252 GMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG 311
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ AR++FD++ ++D+VSW+S++ YA +GF KEA+ F M+R ++P + + VL+
Sbjct: 312 SIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLT 371
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQV 299
AC+ G L+ G M+++ + T++D+ + G + +A + EM +
Sbjct: 372 ACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA 431
Query: 300 VWNAVVSGLSMN 311
+W A+++ M+
Sbjct: 432 IWKALLNACRMH 443
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/569 (40%), Positives = 351/569 (61%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+ CAR H I++ L+ D + L+N Y CG++ A +VFD + +++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+VSW +I Y EA+++F + + G K F+I VL+AC D K +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ N++V T+L+DLYAKCG ++ A +VF+ M +K V+WSSM+ GY N +E
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
AL ++ QR +L+ +T+ V+ AC++L AL G + + ++ F SN + ++ +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
MYAKCG + ++ +F E+++K+ +WN ++SG + + K +F ++++ G+ PN T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSM 395
F LL C H GLV+EGR+FF M + L+P + HY CMVD+LGR+G L EA+ELIKS+
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 396 PMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAA 455
P +P A +WG+LLA CR++K +LAE +L LEP N+GN+VLLSNIY+A+ +W + A
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 456 KIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVP 515
K R ++ D ++K+RG SW+++ VH F VG++ HP +I S LD L K + G+ P
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546
Query: 516 TTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLIS 575
+ +H L D+E +K+ L HSEKLAL FGL+ +RI KNLR+C DCHE +K S
Sbjct: 547 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 606
Query: 576 KITGREIIVRDNNRFHCFIEGSCSCKDFW 604
T R IIVRD NRFH F +G CSC DFW
Sbjct: 607 MATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 178/309 (57%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + N A++ + MRNEGF + FT VL AC D + H L VK
Sbjct: 133 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 192
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+D + +V T+LL+LY CG + DA++VF+ + DK+ V+W+++++GY+ N EEA+ ++R
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R L+ + F++ V+ AC+ L L K +H + ++G G NVFVA+S VD+YAKCG
Sbjct: 253 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 312
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ ++ +F ++ EK++ W+++I G+A + PKE + +F MQ++ + P T +LS
Sbjct: 313 SLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 372
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMK-DKDQ 298
C G +E G M LS N V + ++D+ + G +++A ++ + + D
Sbjct: 373 VCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTA 432
Query: 299 VVWNAVVSG 307
+W ++++
Sbjct: 433 SIWGSLLAS 441
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/618 (37%), Positives = 374/618 (60%), Gaps = 14/618 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ N+ A+E+ M EG P FT VL AC+ + G H+ +K G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 61 -LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
LD + FV ++L+++Y +C + +VFD + D+ + W A+I+GY + +EA+ +F
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 120 RRLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK 178
+ GL +S ++ V+ AC + G S + IHG+V + G R+ FV +L+D+Y++
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 179 CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ-----------REN 227
G ++ A R+F +M ++D+V+W++MI GY + ++AL + + MQ R +
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 228 LKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
LKP T++ +L +CA+L AL G ++ +N ++ +G+ L+DMYAKCG + +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
KVF ++ K+ + WN ++ M+G + A + + G++PN TF+ + C+H+G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 348 LVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN-AIVWGA 406
+VDEG + F M + + P +HY C+VDLLGR+G++ EA++L+ MP + N A W +
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
LL R+H ++ E LI LEP + +YVLL+NIYS++ W+ A ++R M ++G+
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
+K GCSW+E VH+F+ GD+SHP SEK+ L+ L +++ G+VP T VL ++EE
Sbjct: 753 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 812
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
+EK+ L HSEKLA+AFG++ T+P +IR+AKNLRVC DCH A K ISKI REII+RD
Sbjct: 813 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872
Query: 587 NNRFHCFIEGSCSCKDFW 604
RFH F G+CSC D+W
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 217/438 (49%), Gaps = 11/438 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++R V ++ + A+ Y M G P N+ FP +LKA A D +LG + H+ + K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 61 LDCDEF-VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D V +L+NLY CG KVFD I ++N VSW ++IS + E A+ F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLG---DLSTAKWIHGYVNEAGKGRNVFVATSLVDLY 176
R +L ++P SF++V V+TAC+ L L K +H Y G+ N F+ +LV +Y
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-LNSFIINTLVAMY 246
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
K G + ++ + +D+V+W++++ N EAL+ M E ++P+ +T+
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 237 GVLSACASLGALELGVWASSFMERNEFL-SNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
VL AC+ L L G ++ +N L N +G+ L+DMY C ++ +VF M D
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVF-GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
+ +WNA+++G S N + K A +F G E G+ N T G++ C +G
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426
Query: 355 FFN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+ R +++ ++D+ R G++D A + M + + + W ++ G
Sbjct: 427 IHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVF 483
Query: 414 HKKTDLAEHVLNQLIALE 431
+ + A +L+++ LE
Sbjct: 484 SEHHEDALLLLHKMQNLE 501
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 157/316 (49%), Gaps = 6/316 (1%)
Query: 99 WTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVN 158
W ++ + L EA+ + ++ G+KPD+++ +L A L D+ K IH +V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 159 EAGKG-RNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G G +V VA +LV+LY KCG+ +VFD++ E++ VSW+S+I S + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLG---ALELGVWASSFMERNEFLSNPVLGTTLI 274
+ F M EN++P +T+V V++AC++L L +G ++ R L N + TL+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLV 243
Query: 275 DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 334
MY K G++A + + +D V WN V+S L N + A ++ G++P+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 335 TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
T +L C+H ++ G++ + SL +VD+ Q+ +
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 395 MPMEPNAIVWGALLAG 410
M + +W A++AG
Sbjct: 364 M-FDRKIGLWNAMIAG 378
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/583 (40%), Positives = 345/583 (59%), Gaps = 6/583 (1%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P+ T+ ++ C +R H I+ G D D F+ T L+ +Y G + A KV
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACT----Q 143
FD + + W A+ G+ EE + ++ ++ G++ D F+ VL AC
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+ L K IH ++ G +V++ T+LVD+YA+ G ++ A VF MP +++VSWS+M
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 204 IQGYASNGFPKEALDMFYNMQRE--NLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
I YA NG EAL F M RE + P TMV VL ACASL ALE G ++ R
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 262 EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVF 321
S + + L+ MY +CG++ +VF M D+D V WN+++S ++GY K A +F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 322 GQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGR 381
++ G P TFV +L C+H GLV+EG++ F +M R + P IEHY CMVDLLGR
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
Query: 382 SGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLL 441
+ +LDEA ++++ M EP VWG+LL CR+H +LAE +L ALEP N+GNYVLL
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLL 494
Query: 442 SNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKL 501
++IY+ + W++ +++ ++ +G+QK+ G W+EV ++ F+ D +PL E+I++ L
Sbjct: 495 ADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFL 554
Query: 502 DELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNL 561
+LA +K G++P T VL+++E EEK+ + HSEKLALAFGLI T+ + IRI KNL
Sbjct: 555 VKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNL 614
Query: 562 RVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
R+C DCH K ISK +EI+VRD NRFH F G CSC D+W
Sbjct: 615 RLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 164/314 (52%), Gaps = 8/314 (2%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACARE----HDFQLGVRSHSLIVKAGLDCDEFV 67
+ + Y M G FT+ +VLKAC + G H+ + + G ++
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 68 KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLH--R 125
T+L+++Y G + A VF +P +NVVSW+A+I+ Y G EA+ FR ++ +
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
P+S ++V VL AC L L K IHGY+ G + V ++LV +Y +CG +E
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVG 339
Query: 186 RRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASL 245
+RVFD+M ++D+VSW+S+I Y +G+ K+A+ +F M P T V VL AC+
Sbjct: 340 QRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHE 399
Query: 246 GALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNA 303
G +E G M R+ + + ++D+ + R+ +A K+ ++M+ + VW +
Sbjct: 400 GLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGS 459
Query: 304 VVSGLSMNGYVKVA 317
++ ++G V++A
Sbjct: 460 LLGSCRIHGNVELA 473
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 167/341 (48%), Gaps = 16/341 (4%)
Query: 97 VSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGY 156
+S +I EG L++AI R+L + P + ++ C LS A +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 157 VNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEA 216
+ + G ++ F+AT L+ +Y+ G+++ AR+VFD+ ++ I W+++ + G +E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 217 LDMFYNMQRENLKPEYYTMVGVLSACA----SLGALELGVWASSFMERNEFLSNPVLGTT 272
L +++ M R ++ + +T VL AC ++ L G + + R + S+ + TT
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQL--EKCGIQ 330
L+DMYA+ G + A VF M ++ V W+A+++ + NG A F ++ E
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEA 388
PN T V +L C +++G+ + R + S+ P+I +V + GR G+L+
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYGRCGKLEVG 339
Query: 389 HELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
+ M + + + W +L++ +H A + +++A
Sbjct: 340 QRVFDRM-HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/673 (37%), Positives = 374/673 (55%), Gaps = 70/673 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKA 59
MI GF N+ AI + M++EGF P NFTF VL A D + V+ H+ +K+
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKS 178
Query: 60 GLDCDEFVKTSLLNLYVHCG----YLADALKVFDDIPDKNVVSWT--------------- 100
G V +L+++Y C L A KVFD+I +K+ SWT
Sbjct: 179 GAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLG 238
Query: 101 -----------------AIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A+ISGY+N G +EA+ M RR++ G++ D F+ V+ AC
Sbjct: 239 EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT 298
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
G L K +H YV + + SLV LY KCG ++AR +F++MP KD+VSW+++
Sbjct: 299 AGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNAL 357
Query: 204 IQGY-------------------------------ASNGFPKEALDMFYNMQRENLKPEY 232
+ GY A NGF +E L +F M+RE +P
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD 417
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
Y G + +CA LGA G + + + F S+ G LI MYAKCG + +A +VFR
Sbjct: 418 YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRT 477
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
M D V WNA+++ L +G+ A V+ ++ K GI+P+ T + +L C+HAGLVD+G
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQG 537
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
R++F+SM V+ + P +HY ++DLL RSG+ +A +I+S+P +P A +W ALL+GCR
Sbjct: 538 RKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCR 597
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGC 472
+H +L ++L L P + G Y+LLSN+++A+ +W + A++R +M D+G++K C
Sbjct: 598 VHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVAC 657
Query: 473 SWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEE-EKQY 531
SW+E++ VH FLV D SHP +E +Y L +L +++ G+VP T VL D+E + K+
Sbjct: 658 SWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKED 717
Query: 532 FLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFH 591
L HSEK+A+AFGL+ P IRI KNLR CGDCH + +S + R+II+RD RFH
Sbjct: 718 MLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFH 777
Query: 592 CFIEGSCSCKDFW 604
F G CSC +FW
Sbjct: 778 HFRNGECSCGNFW 790
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 199/439 (45%), Gaps = 77/439 (17%)
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPD--KNVVSWTAIISGYINEGNLEEAINMFRR 121
D+ +T++++ Y G + A VF+ P ++ V + A+I+G+ + + AIN+F +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 122 LLHRGLKPDSFSIVRVLTACTQLG-DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
+ H G KPD+F+ VL + D H ++G G V+ +LV +Y+KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 181 N----MEKARRVFDQMPEKDIVSWSSMIQGYASN-------------------------- 210
+ + AR+VFD++ EKD SW++M+ GY N
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 211 ------GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFL 264
GF +EAL+M M ++ + +T V+ ACA+ G L+LG +++ R E
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 265 SNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV-------------------- 304
S +L+ +Y KCG+ +A +F +M KD V WNA+
Sbjct: 319 SFH-FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 305 -----------VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGR 353
+SGL+ NG+ + +F +++ G +P F G + C G G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
Q+ + ++ + ++ + + G ++EA ++ ++MP +++ W AL+A
Sbjct: 438 QYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQ 495
Query: 414 H----KKTDLAEHVLNQLI 428
H + D+ E +L + I
Sbjct: 496 HGHGAEAVDVYEEMLKKGI 514
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 142/336 (42%), Gaps = 77/336 (22%)
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
L A+ +HG + G + L+D+Y K + AR++FD++ E D ++ ++M+ G
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 207 YASNG--------FPK-------------------------EALDMFYNMQRENLKPEYY 233
Y ++G F K A+++F M+ E KP+ +
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 234 TMVGVLSACASLGALE---LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGR----MAQA 286
T VL+ A + E + A++ ++++ + L+ +Y+KC + A
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITS--VSNALVSVYSKCASSPSLLHSA 207
Query: 287 CKVFREMKDKDQVVW--------------------------------NAVVSGLSMNGYV 314
KVF E+ +KD+ W NA++SG G+
Sbjct: 208 RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFY 267
Query: 315 KVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGC 374
+ A + ++ GI+ + T+ ++ C AGL+ G+Q + R + ++
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--S 325
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+V L + G+ DEA + + MP + + + W ALL+G
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/572 (41%), Positives = 352/572 (61%), Gaps = 42/572 (7%)
Query: 71 LLNLYVHCGY-----LADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 125
+LNL +H Y + +L +F D ++ +TA I+ G ++A ++ +LL
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSS 124
Query: 126 GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKA 185
+ P+ F+ +L +C+ + K IH +V + G G + +VAT LVD+YAK G++ A
Sbjct: 125 EINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSA 180
Query: 186 RRVFDQMPEK-------------------------------DIVSWSSMIQGYASNGFPK 214
++VFD+MPE+ DIVSW+ MI GYA +GFP
Sbjct: 181 QKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPN 240
Query: 215 EALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTL 273
+AL +F + E KP+ T+V LSAC+ +GALE G W F++ + N + T L
Sbjct: 241 DALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGL 300
Query: 274 IDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK-CGIQPN 332
IDMY+KCG + +A VF + KD V WNA+++G +M+GY + A +F +++ G+QP
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
TF+G L C HAGLV+EG + F SM + + + P IEHYGC+V LLGR+GQL A+E I
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
K+M M+ ++++W ++L C+LH L + + LI L NSG YVLLSNIY++ +
Sbjct: 421 KNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYE 480
Query: 453 DAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAG 512
AK+R++M +KGI K G S +E++ VHEF GD H S++IY+ L +++ ++K+ G
Sbjct: 481 GVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHG 540
Query: 513 FVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIK 572
+VP T+ VL D+EE EK+ L HSE+LA+A+GLI+T P ++I KNLRVC DCH K
Sbjct: 541 YVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTK 600
Query: 573 LISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
LISKITGR+I++RD NRFH F +GSCSC DFW
Sbjct: 601 LISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 184/341 (53%), Gaps = 52/341 (15%)
Query: 19 NSMRNEGFL-----------PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFV 67
N ++++ FL P FTF +LK+C+ + G H+ ++K GL D +V
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYV 163
Query: 68 KTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE-------------- 113
T L+++Y G + A KVFD +P++++VS TA+I+ Y +GN+E
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI 223
Query: 114 -----------------EAINMFRRLLHRG-LKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
+A+ +F++LL G KPD ++V L+AC+Q+G L T +WIH
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHV 283
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+V + NV V T L+D+Y+KCG++E+A VF+ P KDIV+W++MI GYA +G+ ++
Sbjct: 284 FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQD 343
Query: 216 ALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TT 272
AL +F MQ L+P T +G L ACA G + G+ M + E+ P +
Sbjct: 344 ALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ-EYGIKPKIEHYGC 402
Query: 273 LIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNG 312
L+ + + G++ +A + + M D D V+W++V+ ++G
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
MI G+ + A+ + + EG P T L AC++ + G H + +
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS 288
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
+ + V T L+++Y CG L +A+ VF+D P K++V+W A+I+GY G ++A+ +F
Sbjct: 289 RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLF 348
Query: 120 RRLLH-RGLKPDSFSIVRVLTACTQLGDLSTA-KWIHGYVNEAGKGRNVFVATSLVDLYA 177
+ GL+P + + L AC G ++ + E G + LV L
Sbjct: 349 NEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLG 408
Query: 178 KCGNMEKARRVFDQMP-EKDIVSWSSMI 204
+ G +++A M + D V WSS++
Sbjct: 409 RAGQLKRAYETIKNMNMDADSVLWSSVL 436
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 77/190 (40%), Gaps = 29/190 (15%)
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
PVL L YA G++ + +F + D D ++ A ++ S+NG AF ++ QL
Sbjct: 64 PVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS 123
Query: 327 CGIQPNGNTFVGLLCGC---------TH-------------AGLVD---EGRQFFNSMSR 361
I PN TF LL C TH GLVD +G S +
Sbjct: 124 SEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVV-SAQK 182
Query: 362 VFSLTP--MIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
VF P + M+ + G ++ A L SM E + + W ++ G H +
Sbjct: 183 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM-CERDIVSWNVMIDGYAQHGFPND 241
Query: 420 AEHVLNQLIA 429
A + +L+A
Sbjct: 242 ALMLFQKLLA 251
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/670 (37%), Positives = 373/670 (55%), Gaps = 66/670 (9%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + + AI M EG PT FT VL + A + G + HS IVK G
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG 176
Query: 61 LDCDEFVKTSLLNLYVHCG------YLAD-------------------------ALKVFD 89
L + V SLLN+Y CG ++ D A+ F+
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFE 236
Query: 90 DIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGL-KPDSFSIVRVLTACTQLGDLS 148
+ ++++V+W ++ISG+ G A+++F ++L L PD F++ VL+AC L L
Sbjct: 237 QMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLC 296
Query: 149 TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ----------------- 191
K IH ++ G + V +L+ +Y++CG +E ARR+ +Q
Sbjct: 297 IGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG 356
Query: 192 ----------------MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
+ ++D+V+W++MI GY +G EA+++F +M +P YT+
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK- 294
+LS +SL +L G ++ + + + LI MYAK G + A + F ++
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 295 DKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQ 354
++D V W +++ L+ +G+ + A +F + G++P+ T+VG+ CTHAGLV++GRQ
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Query: 355 FFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+F+ M V + P + HY CMVDL GR+G L EA E I+ MP+EP+ + WG+LL+ CR+H
Sbjct: 537 YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Query: 415 KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW 474
K DL + +L+ LEP NSG Y L+N+YSA KW +AAKIR M D ++K +G SW
Sbjct: 597 KNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSW 656
Query: 475 VEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLA 534
+EV VH F V D +HP +IY + ++ ++K G+VP T VL D+EEE K+ L
Sbjct: 657 IEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILR 716
Query: 535 CHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFI 594
HSEKLA+AFGLI+T K +RI KNLRVC DCH AIK ISK+ GREIIVRD RFH F
Sbjct: 717 HHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFK 776
Query: 595 EGSCSCKDFW 604
+G CSC+D+W
Sbjct: 777 DGFCSCRDYW 786
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 201/489 (41%), Gaps = 130/489 (26%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDD---------------------- 90
H ++K+GL ++ +L+N+Y GY A K+FD+
Sbjct: 37 HCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM 96
Query: 91 ---------IPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTAC 141
+P ++ VSWT +I GY N G +AI + ++ G++P F++ VL +
Sbjct: 97 DSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASV 156
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD----------- 190
+ T K +H ++ + G NV V+ SL+++YAKCG+ A+ VFD
Sbjct: 157 AATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWN 216
Query: 191 --------------------QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-LK 229
QM E+DIV+W+SMI G+ G+ ALD+F M R++ L
Sbjct: 217 AMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLS 276
Query: 230 PEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKC--------- 280
P+ +T+ VLSACA+L L +G S + F + ++ LI MY++C
Sbjct: 277 PDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336
Query: 281 ------------------------GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
G M QA +F +KD+D V W A++ G +G
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGE 396
Query: 317 AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF--------------------- 355
A +F + G +PN T +L + + G+Q
Sbjct: 397 AINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALIT 456
Query: 356 -------FNSMSRVFSLTPM---IEHYGCMVDLLGRSGQLDEAHELIKSMPME---PNAI 402
S SR F L + M+ L + G +EA EL ++M ME P+ I
Sbjct: 457 MYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Query: 403 VWGALLAGC 411
+ + + C
Sbjct: 517 TYVGVFSAC 525
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/612 (40%), Positives = 358/612 (58%), Gaps = 10/612 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N CF A+E Y SMR LP +FT L +CA +LG + H +K G
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYI-NEGNLEEAINMF 119
+D + V +L+ LY GYL + K+F +P+ + VSW +II +E +L EA+ F
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 120 RRLLHRGLKPD--SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
G K + +FS V + G+L K IHG + +L+ Y
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEATTENALIACYG 563
Query: 178 KCGNMEKARRVFDQMPEK-DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
KCG M+ ++F +M E+ D V+W+SMI GY N +ALD+ + M + + + +
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
VLSA AS+ LE G+ + R S+ V+G+ L+DMY+KCGR+ A + F M +
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 683
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQF 355
+ WN+++SG + +G + A +F ++ G P+ TFVG+L C+HAGL++EG +
Sbjct: 684 NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 743
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLH 414
F SMS + L P IEH+ CM D+LGR+G+LD+ + I+ MPM+PN ++W +L A CR +
Sbjct: 744 FESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
Query: 415 -KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
+K +L + L LEP N+ NYVLL N+Y+A +W D K R M D ++K G S
Sbjct: 804 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
WV + VH F+ GD SHP ++ IY KL EL K++ AG+VP T L+D+E+E K+ L
Sbjct: 864 WVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEIL 923
Query: 534 ACHSEKLALAFGLITTAPKDV-IRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHC 592
+ HSEKLA+AF L + IRI KNLRVCGDCH A K ISKI GR+II+RD+NRFH
Sbjct: 924 SYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHH 983
Query: 593 FIEGSCSCKDFW 604
F +G+CSC DFW
Sbjct: 984 FQDGACSCSDFW 995
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 205/436 (47%), Gaps = 17/436 (3%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQL--GVRSHSLIVK 58
++ G+ N + A+ F M EG + F VL+AC + G + H L+ K
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 59 AGLDCDEFVKTSLLNLYVHC-GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
D V L+++Y C G + AL F DI KN VSW +IIS Y G+ A
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLG--DLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+F + + G +P ++ ++T L D+ + I + ++G ++FV + LV
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSA 252
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE-NLKPEYYT 234
+AK G++ AR+VF+QM ++ V+ + ++ G + +EA +F +M ++ PE Y
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 235 MVGVLSACASLG-ALELGVWASSFMERNEFLSNPV-----LGTTLIDMYAKCGRMAQACK 288
+ +LS+ A E+G+ + + + V +G L++MYAKCG +A A +
Sbjct: 313 I--LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR 370
Query: 289 VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 348
VF M DKD V WN++++GL NG A + + + I P T + L C
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Query: 349 VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 408
G+Q S + + ++ L +G L+E ++ SMP E + + W +++
Sbjct: 431 AKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSII 488
Query: 409 AGCRLHKKTDLAEHVL 424
G + L E V+
Sbjct: 489 -GALARSERSLPEAVV 503
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 204/407 (50%), Gaps = 9/407 (2%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTF-PFVLKACA-REHDFQLGVRSHSLIVKAGLDCDEFVKT 69
+ A ++SM+ +G PT +TF V AC+ E D +L + I K+GL D FV +
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGS 247
Query: 70 SLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLK 128
L++ + G L+ A KVF+ + +N V+ ++ G + + EEA +F + +
Sbjct: 248 GLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVS 307
Query: 129 PDSFSIVRVLTACTQLGD---LSTAKWIHGYVNEAG-KGRNVFVATSLVDLYAKCGNMEK 184
P+S+ I+ L + L + +HG+V G V + LV++YAKCG++
Sbjct: 308 PESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIAD 367
Query: 185 ARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACAS 244
ARRVF M +KD VSW+SMI G NG EA++ + +M+R ++ P +T++ LS+CAS
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCAS 427
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
L +LG + N + L+ +YA+ G + + K+F M + DQV WN++
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSI 487
Query: 305 VSGLSMNGY-VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVF 363
+ L+ + + A F ++ G + N TF +L + + G+Q + ++
Sbjct: 488 IGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLALKN 546
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
++ ++ G+ G++D ++ M + + W ++++G
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 192/410 (46%), Gaps = 6/410 (1%)
Query: 41 AREHDFQLGVRSHSLIVKAGL-DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSW 99
A E + G H ++ GL D + L+N+Y CG +ADA +VF + DK+ VSW
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSW 383
Query: 100 TAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNE 159
++I+G G EA+ ++ + + P SF+++ L++C L + IHG +
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 443
Query: 160 AGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYA-SNGFPKEALD 218
G NV V+ +L+ LYA+ G + + R++F MPE D VSW+S+I A S EA+
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVV 503
Query: 219 MFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYA 278
F N QR K T VLSA +SL ELG +N LI Y
Sbjct: 504 CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYG 563
Query: 279 KCGRMAQACKVFREMKD-KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFV 337
KCG M K+F M + +D V WN+++SG N + A + + + G + + +
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 338 GLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPM 397
+L ++ G + R L + +VD+ + G+LD A +MP+
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRA-CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 398 EPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
N+ W ++++G H + + A + + + L+ ++V + SA
Sbjct: 683 R-NSYSWNSMISGYARHGQGEEALKLF-ETMKLDGQTPPDHVTFVGVLSA 730
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 206/418 (49%), Gaps = 30/418 (7%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
HS + K LD D ++ +L+N Y+ G A KVFD++P +N VSW I+SGY G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST--AKWIHGYVNEAGKGRNVFVAT 170
+EA+ R ++ G+ + ++ V VL AC ++G + + IHG + + + V+
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 171 SLVDLYAKC-GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK 229
L+ +Y KC G++ A F + K+ VSW+S+I Y+ G + A +F +MQ + +
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 230 PEYYTMVGVLSACASLGALELGVWASSF--MERNEFLSNPVLGTTLIDMYAKCGRMAQAC 287
P YT +++ SL ++ + ++++ L++ +G+ L+ +AK G ++ A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 288 KVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG 347
KVF +M+ ++ V N ++ GL + + A +F + I + ++V LL
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYS 322
Query: 348 LVDE-----GRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAI 402
L +E GR+ + + M+ +V++ + G + +A + M + +++
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DKDSV 381
Query: 403 VWGALLAGCRLHKKTDLAEHVLNQLIALEPWNS--------GNYVLLSNIYS-ASHKW 451
W +++ G L + E A+E + S G++ L+S++ S AS KW
Sbjct: 382 SWNSMITG--LDQNGCFIE-------AVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 150/307 (48%), Gaps = 15/307 (4%)
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
+G A++ H + + ++V++ +L++ Y + G+ AR+VFD+MP ++ VSW+ +
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL--GVWASSFMERN 261
+ GY+ NG KEAL +M +E + Y V VL AC +G++ + G M +
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL 133
Query: 262 EFLSNPVLGTTLIDMYAKC-GRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGV 320
+ + V+ LI MY KC G + A F +++ K+ V WN+++S S G + AF +
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRI 193
Query: 321 FGQLEKCGIQPNGNTFVGLL---CGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVD 377
F ++ G +P TF L+ C T V Q ++ + LT + G +V
Sbjct: 194 FSSMQYDGSRPTEYTFGSLVTTACSLTEPD-VRLLEQIMCTIQKSGLLTDLFVGSG-LVS 251
Query: 378 LLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHV---LNQLIALEPWN 434
+SG L A ++ M NA+ L+ G K + A + +N +I + P
Sbjct: 252 AFAKSGSLSYARKVFNQMETR-NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP-- 308
Query: 435 SGNYVLL 441
+YV+L
Sbjct: 309 -ESYVIL 314
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/491 (46%), Positives = 321/491 (65%), Gaps = 11/491 (2%)
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++L GL D F +L + GDL +A+ + +++G +++ S+V+ YAK G
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRV---FDDSG-SKDLPAWNSVVNAYAKAG 142
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQREN-----LKPEYYTM 235
++ AR++FD+MPE++++SWS +I GY G KEALD+F MQ ++P +TM
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
VLSAC LGALE G W +++++ + VLGT LIDMYAKCG + +A +VF +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 296 KDQV-VWNAVVSGLSMNGYVKVAFGVFGQLEKC-GIQPNGNTFVGLLCGCTHAGLVDEGR 353
K V ++A++ L+M G F +F ++ I PN TFVG+L C H GL++EG+
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 354 QFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRL 413
+F M F +TP I+HYGCMVDL GRSG + EA I SMPMEP+ ++WG+LL+G R+
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 414 HKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCS 473
E L +LI L+P NSG YVLLSN+Y+ + +W + IR M KGI K+ GCS
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
Query: 474 WVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFL 533
+VEV+GVVHEF+VGD S SE+IY+ LDE+ +L+ AG+V T VL D+ E++K+ L
Sbjct: 443 YVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIAL 502
Query: 534 ACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCF 593
+ HSEKLA+AF L+ T P +RI KNLR+CGDCH +K+ISK+ REI+VRD NRFH F
Sbjct: 503 SYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHF 562
Query: 594 IEGSCSCKDFW 604
+GSCSC+DFW
Sbjct: 563 RDGSCSCRDFW 573
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 188/361 (52%), Gaps = 44/361 (12%)
Query: 6 VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 65
VS+ I Y MRN P TFPF+L + LG R+H+ I+ GLD D
Sbjct: 38 VSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDP 97
Query: 66 FVKTSLLNLYVHCGYLA-------------------------------DALKVFDDIPDK 94
FV+TSLLN+Y CG L DA K+FD++P++
Sbjct: 98 FVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER 157
Query: 95 NVVSWTAIISGYINEGNLEEAINMFRRLL-----HRGLKPDSFSIVRVLTACTQLGDLST 149
NV+SW+ +I+GY+ G +EA+++FR + ++P+ F++ VL+AC +LG L
Sbjct: 158 NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQ 217
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM-PEKDIVSWSSMIQGYA 208
KW+H Y+++ ++ + T+L+D+YAKCG++E+A+RVF+ + +KD+ ++S+MI A
Sbjct: 218 GKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLA 277
Query: 209 SNGFPKEALDMFYNM-QRENLKPEYYTMVGVLSACASLGALELGVWASSF-MERNEFLSN 266
G E +F M +N+ P T VG+L AC G + G S F M EF
Sbjct: 278 MYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG--KSYFKMMIEEFGIT 335
Query: 267 PVLGT--TLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
P + ++D+Y + G + +A M + D ++W +++SG M G +K G +
Sbjct: 336 PSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKR 395
Query: 324 L 324
L
Sbjct: 396 L 396
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/596 (36%), Positives = 347/596 (58%)
Query: 9 DCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVK 68
D +++ + M+ E +P +T+P +LK C R D +LG + HS I+K + +V
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 69 TSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLK 128
+ L+++Y G L A + K+VVSWT +I+GY ++A+ FR++L RG++
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 129 PDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRV 188
D + ++AC L L + IH +G ++ +LV LY++CG +E++
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 189 FDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGAL 248
F+Q D ++W++++ G+ +G +EAL +F M RE + +T + A + +
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 249 ELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGL 308
+ G + + + + S + LI MYAKCG ++ A K F E+ K++V WNA+++
Sbjct: 709 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY 768
Query: 309 SMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPM 368
S +G+ A F Q+ ++PN T VG+L C+H GLVD+G +F SM+ + L+P
Sbjct: 769 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828
Query: 369 IEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
EHY C+VD+L R+G L A E I+ MP++P+A+VW LL+ C +HK ++ E + L+
Sbjct: 829 PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 888
Query: 429 ALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
LEP +S YVLLSN+Y+ S KW+ R M +KG++K G SW+EV +H F VGD
Sbjct: 889 ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 948
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLIT 548
+HPL+++I+ +L + G+V +L +++ E+K + HSEKLA++FGL++
Sbjct: 949 QNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1008
Query: 549 TAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I + KNLRVC DCH IK +SK++ REIIVRD RFH F G+CSCKD+W
Sbjct: 1009 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 221/452 (48%), Gaps = 3/452 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G N+C AI + M G +PT + F VL AC + ++G + H L++K G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D +V +L++LY H G L A +F ++ ++ V++ +I+G G E+A+ +F+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ GL+PDS ++ ++ AC+ G L + +H Y + G N + +L++LYAKC
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++E A F + +++V W+ M+ Y + + +F MQ E + P YT +L
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
C LG LELG S + + F N + + LIDMYAK G++ A + KD V
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 558
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W +++G + + A F Q+ GI+ + + C + EG+Q ++ +
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQA 617
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
V + + +V L R G+++E++ + N I W AL++G + + A
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEA 676
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWN 452
V ++ E ++ N+ S + +AS N
Sbjct: 677 LRVFVRM-NREGIDNNNFTFGSAVKAASETAN 707
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 208/422 (49%), Gaps = 18/422 (4%)
Query: 19 NSMRNEGFLPTNFTFPFVLKACAREH-DFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVH 77
+S+ N G P + T ++L+ C + + G + HS I+K GLD + + L + Y+
Sbjct: 73 DSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLF 132
Query: 78 CGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRV 137
G L A KVFD++P++ + +W +I + + E +F R++ + P+ + V
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192
Query: 138 LTACTQLGDLS--TAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEK 195
L AC + G ++ + IH + G + V L+DLY++ G ++ ARRVFD + K
Sbjct: 193 LEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 196 DIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS 255
D SW +MI G + N EA+ +F +M + P Y VLSAC + +LE+G
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 256 SFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVK 315
+ + F S+ + L+ +Y G + A +F M +D V +N +++GLS GY +
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 316 VAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGC 374
A +F ++ G++P+ NT L+ C+ G + G+Q +++ F+ IE G
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GA 429
Query: 375 MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC----------RLHKKTDLAEHVL 424
+++L + ++ A + +E N ++W +L R+ ++ + E V
Sbjct: 430 LLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 425 NQ 426
NQ
Sbjct: 489 NQ 490
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 213/431 (49%), Gaps = 7/431 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKAC-AREHDFQLGVRSHSLIVKA 59
MI+ S + + M +E P TF VL+AC F + + H+ I+
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL V L++LY G++ A +VFD + K+ SW A+ISG EAI +F
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ G+ P ++ VL+AC ++ L + +HG V + G + +V +LV LY
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+ A +F M ++D V+++++I G + G+ ++A+++F M + L+P+ T+ ++
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
AC++ G L G ++ + F SN + L+++YAKC + A F E + ++ V
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+WN ++ + ++ +F +F Q++ I PN T+ +L C G ++ G Q
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH--- 513
Query: 360 SRVFSLTPMIEHYGC--MVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKT 417
S++ + Y C ++D+ + G+LD A +++ + + + W ++AG +
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFD 572
Query: 418 DLAEHVLNQLI 428
D A Q++
Sbjct: 573 DKALTTFRQML 583
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 158/309 (51%), Gaps = 2/309 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G+ + A+ + M + G + ACA + G + H+ +G
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 621
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D + +L+ LY CG + ++ F+ + ++W A++SG+ GN EEA+ +F
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
R+ G+ ++F+ + A ++ ++ K +H + + G V +L+ +YAKCG
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 741
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
++ A + F ++ K+ VSW+++I Y+ +GF EALD F M N++P + T+VGVLS
Sbjct: 742 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 801
Query: 241 ACASLGALELGVWASSFMERNEFLS-NPVLGTTLIDMYAKCGRMAQACKVFREMKDK-DQ 298
AC+ +G ++ G+ M LS P ++DM + G +++A + +EM K D
Sbjct: 802 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 861
Query: 299 VVWNAVVSG 307
+VW ++S
Sbjct: 862 LVWRTLLSA 870
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 159/349 (45%), Gaps = 42/349 (12%)
Query: 101 AIISGYINEGNLEEAINMFR--RLLHRGLKPDSFSIVRVLTACTQL-GDLSTAKWIHGYV 157
A IS YI+E +E+ R + +RG++P+ ++ +L C + G L + +H +
Sbjct: 55 AAISVYISE---DESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQI 111
Query: 158 NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEAL 217
+ G N ++ L D Y G++ A +VFD+MPE+ I +W+ MI+ AS E
Sbjct: 112 LKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVF 171
Query: 218 DMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWAS--SFMERNEFLSNPVLGTTLID 275
+F M EN+ P T GVL AC G++ V + + + V+ LID
Sbjct: 172 GLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLID 230
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y++ G + A +VF ++ KD W A++SGLS N A +F + GI P
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 336 FVGLLCGCTHAGLVDEGRQF--------FNS--------MSRVFSLTPMI--EH------ 371
F +L C ++ G Q F+S +S F L +I EH
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 372 ------YGCMVDLLGRSGQLDEAHELIKSMP---MEPNAIVWGALLAGC 411
Y +++ L + G ++A EL K M +EP++ +L+ C
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/606 (38%), Positives = 342/606 (56%), Gaps = 2/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+I G N F A+ + MR EG +P +FTFP KA A G + H+L VK G
Sbjct: 79 LISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG 138
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D FV S ++Y DA K+FD+IP++N+ +W A IS + +G EAI F
Sbjct: 139 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 198
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
P+S + L AC+ L+ +HG V +G +V V L+D Y KC
Sbjct: 199 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK 258
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + +F +M K+ VSW S++ Y N ++A ++ +++ ++ + + VLS
Sbjct: 259 QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLS 318
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
ACA + LELG + + +G+ L+DMY KCG + + + F EM +K+ V
Sbjct: 319 ACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 378
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEK--CGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
N+++ G + G V +A +F ++ CG PN TFV LL C+ AG V+ G + F+S
Sbjct: 379 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS 438
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M + + P EHY C+VD+LGR+G ++ A+E IK MP++P VWGAL CR+H K
Sbjct: 439 MRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 498
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
L L L+P +SGN+VLLSN ++A+ +W +A +R + GI+K G SW+ V
Sbjct: 499 LGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVK 558
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSE 538
VH F D SH L+++I + L +L +++AAG+ P L+D+EEEEK ++ HSE
Sbjct: 559 NQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSE 618
Query: 539 KLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
KLALAFGL++ IRI KNLR+CGDCH K +S REIIVRDNNRFH F +G C
Sbjct: 619 KLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGIC 678
Query: 599 SCKDFW 604
SCKD+W
Sbjct: 679 SCKDYW 684
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 194/418 (46%), Gaps = 5/418 (1%)
Query: 35 FVLKACAREHDFQLGVRSHSLIVKAGLDCDE--FVKTSLLNLYVHCGYLADALKVFDDIP 92
+LK +LG H+ IVK LD F+ L+N+Y + A V P
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTP 69
Query: 93 DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKW 152
+NVVSWT++ISG G+ A+ F + G+ P+ F+ A L T K
Sbjct: 70 ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 153 IHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF 212
IH + G+ +VFV S D+Y K + AR++FD++PE+++ +W++ I ++G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 213 PKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTT 272
P+EA++ F +R + P T L+AC+ L LG+ + R+ F ++ +
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 249
Query: 273 LIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPN 332
LID Y KC ++ + +F EM K+ V W ++V+ N + A ++ + K ++ +
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 309
Query: 333 GNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELI 392
+L C ++ GR + + I +VD+ G+ G ++++ +
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKA-CVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 393 KSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHK 450
MP E N + +L+ G + D+A + ++ + NY+ ++ SA +
Sbjct: 369 DEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/558 (40%), Positives = 340/558 (60%), Gaps = 33/558 (5%)
Query: 80 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG--LKPDSFSIVRV 137
YL A ++ D + + ++I + E++ + +RR+L G LKPD++++ +
Sbjct: 55 YLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFL 114
Query: 138 LTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA-------------------- 177
+ ACT L T +HG G + V T L+ LYA
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 178 -----------KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRE 226
+CG++ AR++F+ MPE+D ++W++MI GYA G +EAL++F+ MQ E
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 227 NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQA 286
+K M+ VLSAC LGAL+ G WA S++ERN+ L TTL+D+YAKCG M +A
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 287 CKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHA 346
+VF M++K+ W++ ++GL+MNG+ + +F +++ G+ PN TFV +L GC+
Sbjct: 295 MEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVV 354
Query: 347 GLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGA 406
G VDEG++ F+SM F + P +EHYGC+VDL R+G+L++A +I+ MPM+P+A VW +
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 407 LLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGI 466
LL R++K +L +++ LE N G YVLLSNIY+ S+ W++ + +R M KG+
Sbjct: 415 LLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGV 474
Query: 467 QKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEE 526
+K GCS +EV+G VHEF VGD SHP +I + +++ +L+ AG+ T V+FDI+E
Sbjct: 475 RKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDE 534
Query: 527 EEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRD 586
EEK+ L HSEK A+AFG+++ IRI KNLRVCGDCH+ +ISKI REIIVRD
Sbjct: 535 EEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRD 594
Query: 587 NNRFHCFIEGSCSCKDFW 604
NRFH F +G CSC FW
Sbjct: 595 RNRFHHFKDGHCSCNGFW 612
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 186/358 (51%), Gaps = 39/358 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEG--FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVK 58
MIR + + + +FY + + G P N+T F+++AC + G++ H + ++
Sbjct: 77 MIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIR 136
Query: 59 AGLDCDEFVKTSLLNLYV-------------------------------HCGYLADALKV 87
G D D V+T L++LY CG + A K+
Sbjct: 137 RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKL 196
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDL 147
F+ +P+++ ++W A+ISGY G EA+N+F + G+K + +++ VL+ACTQLG L
Sbjct: 197 FEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL 256
Query: 148 STAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
+W H Y+ V +AT+LVDLYAKCG+MEKA VF M EK++ +WSS + G
Sbjct: 257 DQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGL 316
Query: 208 ASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNP 267
A NGF ++ L++F M+++ + P T V VL C+ +G ++ G M RNEF P
Sbjct: 317 AMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM-RNEFGIEP 375
Query: 268 VLG--TTLIDMYAKCGRMAQACKVFREMKDKDQ-VVWNAVVSGLSMNGYVKVAFGVFG 322
L L+D+YA+ GR+ A + ++M K VW++++ M Y + GV
Sbjct: 376 QLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM--YKNLELGVLA 431
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/602 (37%), Positives = 355/602 (58%), Gaps = 11/602 (1%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
+ AI F+ M GF FT V ACA + LG + HS +++GL D V+ SL
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSL 308
Query: 72 LNLYVHC---GYLADALKVFDDIPDKNVVSWTAIISGYINEGNL-EEAINMFRRLLHRG- 126
+++Y C G + D KVFD + D +V+SWTA+I+GY+ NL EAIN+F ++ +G
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
++P+ F+ AC L D K + G + G N VA S++ ++ K ME A+
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 428
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLG 246
R F+ + EK++VS+++ + G N ++A + + L +T +LS A++G
Sbjct: 429 RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG 488
Query: 247 ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVS 306
++ G S + + N + LI MY+KCG + A +VF M++++ + W ++++
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548
Query: 307 GLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLT 366
G + +G+ F Q+ + G++PN T+V +L C+H GLV EG + FNSM +
Sbjct: 549 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608
Query: 367 PMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQ 426
P +EHY CMVDLL R+G L +A E I +MP + + +VW L CR+H T+L + +
Sbjct: 609 PKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARK 668
Query: 427 LIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLV 486
++ L+P Y+ LSNIY+ + KW ++ ++R M ++ + K GCSW+EV +H+F V
Sbjct: 669 ILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYV 728
Query: 487 GDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQY----FLACHSEKLAL 542
GD +HP + +IY +LD L T++K G+VP TD VL +EEE + L HSEK+A+
Sbjct: 729 GDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAV 788
Query: 543 AFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKD 602
AFGLI+T+ +R+ KNLRVCGDCH A+K IS ++GREI++RD NRFH F +G CSC D
Sbjct: 789 AFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCND 848
Query: 603 FW 604
+W
Sbjct: 849 YW 850
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 207/412 (50%), Gaps = 18/412 (4%)
Query: 14 AIEFYNSMRNEGFLPTN-FTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A+ + M +G P + TF +LK+C R DF+LG H+ +++ ++ D + SL+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 73 NLYVHCGYLADALKVFDDIP---DKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKP 129
+LY G A A VF+ + ++VVSW+A+++ Y N G +AI +F L GL P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK-GRNVFVATSLVDLYAKCGN-MEKARR 187
+ + V+ AC+ + + G++ + G +V V SL+D++ K N E A +
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGA 247
VFD+M E ++V+W+ MI GFP+EA+ F +M + + +T+ V SACA L
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 248 LELGVWASSFMERNEFLSNPVLGTTLIDMYAKC---GRMAQACKVFREMKDKDQVVWNAV 304
L LG S+ R+ + + + +L+DMYAKC G + KVF M+D + W A+
Sbjct: 285 LSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 305 VSGLSMN-GYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFF-NSMSR 361
++G N A +F ++ G ++PN TF C + G+Q + R
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG-CR 412
+ + + ++ + +S ++++A +S+ E N + + L G CR
Sbjct: 403 GLASNSSVAN--SVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR 451
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 44/301 (14%)
Query: 4 GFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDC 63
G N F+ A + + + + FTF +L A + G + HS +VK GL C
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 64 DEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLL 123
++ V +L+++Y CG + A +VF+ + ++NV+SWT++I+G+ G + F +++
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 124 HRGLKPDSFSIVRVLTACTQLGDLSTAKWIH---GYVNEAGKGRNVFVATSLVDLYAKCG 180
G+KP+ + V +L+AC+ +G L + W H Y + K + A +VDL + G
Sbjct: 568 EEGVKPNEVTYVAILSACSHVG-LVSEGWRHFNSMYEDHKIKPKMEHYAC-MVDLLCRAG 625
Query: 181 NMEKARRVFDQMP-EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+ A + MP + D++ W + L
Sbjct: 626 LLTDAFEFINTMPFQADVLVWRTF-----------------------------------L 650
Query: 240 SACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQ 298
AC ELG + A +E + + P L ++YA G+ ++ ++ R+MK+++
Sbjct: 651 GACRVHSNTELGKLAARKILELDP--NEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
Query: 299 V 299
V
Sbjct: 709 V 709
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 73/205 (35%), Gaps = 48/205 (23%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI GF + +E +N M EG P T+ +L AC+ G R + + +
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE-- 603
Query: 61 LDCDEFVKTS------LLNLYVHCGYLADALKVFDDIP-DKNVVSWTAIISGYINEGNLE 113
D +K +++L G L DA + + +P +V+ W + N
Sbjct: 604 ---DHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSN-- 658
Query: 114 EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLV 173
T+LG L+ K + NE L
Sbjct: 659 ----------------------------TELGKLAARKILELDPNEPA------AYIQLS 684
Query: 174 DLYAKCGNMEKARRVFDQMPEKDIV 198
++YA G E++ + +M E+++V
Sbjct: 685 NIYACAGKWEESTEMRRKMKERNLV 709
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 339/555 (61%), Gaps = 3/555 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H +VK+ F+ L+ Y+ G+ A K+FD++P++++VSW ++ISGY G L
Sbjct: 54 HCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYL 113
Query: 113 EEAINMFRRLL--HRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+ + R++ G +P+ + + +++AC G + IHG V + G V V
Sbjct: 114 GKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVN 173
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKP 230
+ ++ Y K G++ + ++F+ + K++VSW++MI + NG ++ L F +R +P
Sbjct: 174 AFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEP 233
Query: 231 EYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVF 290
+ T + VL +C +G + L + F N + T L+D+Y+K GR+ + VF
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 291 REMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD 350
E+ D + W A+++ + +G+ + A F + GI P+ TF LL C+H+GLV+
Sbjct: 294 HEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
Query: 351 EGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
EG+ +F +MS+ + + P ++HY CMVDLLGRSG L +A+ LIK MPMEP++ VWGALL
Sbjct: 354 EGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
CR++K T L +L LEP + NYV+LSNIYSAS W DA++IR++M KG+ +
Sbjct: 414 CRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRAS 473
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAA-GFVPTTDHVLFDIEEEEK 529
GCS++E +H+F+VGD SHP SEKI KL E+ K+K+ G+ T+ VL D+ E+ K
Sbjct: 474 GCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVK 533
Query: 530 QYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNR 589
+ + HSEK+A+AFGL+ +P + I I KNLR+CGDCHE K IS I R II+RD+ R
Sbjct: 534 EEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKR 593
Query: 590 FHCFIEGSCSCKDFW 604
FH F++GSCSC D+W
Sbjct: 594 FHHFLDGSCSCSDYW 608
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 171/344 (49%), Gaps = 13/344 (3%)
Query: 25 GFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADA 84
GF P TF ++ AC + G H L++K G+ + V + +N Y G L +
Sbjct: 129 GFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSS 188
Query: 85 LKVFDDIPDKNVVSWTAIISGYINEGNLEEAI---NMFRRLLHRGLKPDSFSIVRVLTAC 141
K+F+D+ KN+VSW +I ++ G E+ + NM RR+ H +PD + + VL +C
Sbjct: 189 CKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGH---EPDQATFLAVLRSC 245
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+G + A+ IHG + G N + T+L+DLY+K G +E + VF ++ D ++W+
Sbjct: 246 EDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWT 305
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
+M+ YA++GF ++A+ F M + P++ T +L+AC+ G +E G M +
Sbjct: 306 AMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365
Query: 262 EFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAF 318
+ +P L + ++D+ + G + A + +EM + VW A++ + Y
Sbjct: 366 -YRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRV--YKDTQL 422
Query: 319 GVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFFNSMSR 361
G ++P +G +V L + +GL + + N M +
Sbjct: 423 GTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQ 466
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 136/295 (46%), Gaps = 17/295 (5%)
Query: 127 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKAR 186
L + S++ + +C + + +H V ++ R+ F+ LV Y + G+ A
Sbjct: 30 LDANVSSLIAAVKSCVSI---ELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAE 86
Query: 187 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM--QRENLKPEYYTMVGVLSACAS 244
++FD+MPE+D+VSW+S+I GY+ G+ + ++ M +P T + ++SAC
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 245 LGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
G+ E G + + L + I+ Y K G + +CK+F ++ K+ V WN +
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTM 206
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVD-----EGRQFFNSM 359
+ NG + F + G +P+ TF+ +L C G+V G F
Sbjct: 207 IVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGF 266
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
S +T ++DL + G+L+++ + + P+++ W A+LA H
Sbjct: 267 SGNKCITT------ALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATH 314
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI + N + + ++N R G P TF VL++C +L H LI+ G
Sbjct: 206 MIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
++ + T+LL+LY G L D+ VF +I + ++WTA+++ Y G +AI F
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFE 325
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGR---NVFVATSLVDLYA 177
++H G+ PD + +L AC+ G + K H + + + R + + +VDL
Sbjct: 326 LMVHYGISPDHVTFTHLLNACSHSGLVEEGK--HYFETMSKRYRIDPRLDHYSCMVDLLG 383
Query: 178 KCGNMEKARRVFDQMP-EKDIVSWSSMIQG---YASNGFPKEALDMFYNMQRENLKPEYY 233
+ G ++ A + +MP E W +++ Y +A + + ++ + + Y
Sbjct: 384 RSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGR-NYV 442
Query: 234 TMVGVLSACASLGALELGVWASSFMERN 261
+ + SA G+W + RN
Sbjct: 443 MLSNIYSAS--------GLWKDASRIRN 462
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/606 (37%), Positives = 353/606 (58%), Gaps = 3/606 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
++ +V N F+ +++ + MR GF+P N+TF LKA F H I+K
Sbjct: 218 IVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC 277
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
D V LL LY G ++DA KVF+++P +VV W+ +I+ + G EA+++F
Sbjct: 278 YVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLS-TAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
R+ + P+ F++ +L C +G S + +HG V + G +++V+ +L+D+YAKC
Sbjct: 338 RMREAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
M+ A ++F ++ K+ VSW+++I GY + G +A MF R + T L
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACASL +++LGV + + +LIDMYAKCG + A VF EM+ D
Sbjct: 457 GACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVA 516
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++SG S +G + A + ++ +PNG TF+G+L GC++AGL+D+G++ F SM
Sbjct: 517 SWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESM 576
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
R + P +EHY CMV LLGRSGQLD+A +LI+ +P EP+ ++W A+L+ +
Sbjct: 577 IRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEF 636
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
A +++ + P + YVL+SN+Y+ + +W + A IR M + G++K G SW+E G
Sbjct: 637 ARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQG 696
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F VG + HP + I L+ L K AG+VP + VL D+++EEK L HSE+
Sbjct: 697 DVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSER 756
Query: 540 LALAFGLI-TTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSC 598
LALA+GL+ + ++ I I KNLR+C DCH A+K+IS I R++++RD NRFH F G C
Sbjct: 757 LALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVC 816
Query: 599 SCKDFW 604
SC D W
Sbjct: 817 SCGDHW 822
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 179/376 (47%), Gaps = 8/376 (2%)
Query: 36 VLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKN 95
+L+ C +++D H I+K G D F LLN YV G+ DAL +FD++P++N
Sbjct: 55 MLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114
Query: 96 VVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHG 155
VS+ + GY ++ I ++ RL G + + L L W+H
Sbjct: 115 NVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHS 170
Query: 156 YVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKE 215
+ + G N FV +L++ Y+ CG+++ AR VF+ + KDIV W+ ++ Y NG+ ++
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFED 230
Query: 216 ALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLID 275
+L + M+ P YT L A LGA + + + ++ +P +G L+
Sbjct: 231 SLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQ 290
Query: 276 MYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNT 335
+Y + G M+ A KVF EM D V W+ +++ NG+ A +F ++ + + PN T
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 336 FVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
+L GC G Q + +V F L + + ++D+ + ++D A +L
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN--ALIDVYAKCEKMDTAVKLFAE 408
Query: 395 MPMEPNAIVWGALLAG 410
+ N + W ++ G
Sbjct: 409 LS-SKNEVSWNTVIVG 423
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 162/375 (43%), Gaps = 50/375 (13%)
Query: 130 DSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVF 189
DS + +L C Q D +AK IH + + G ++F L++ Y K G + A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 190 DQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALE 249
D+MPE++ VS+ ++ QGYA ++ + ++ + RE + + L SL E
Sbjct: 108 DEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 250 LGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLS 309
+ W S + + + SN +G LI+ Y+ CG + A VF + KD VVW +VS
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 310 MNGYVKVAFGVFGQLEKCGIQPNGNTF--------------------------------- 336
NGY + + + + G PN TF
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 337 --VGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 394
VGLL T G + + + FN M + + P + M+ ++G +EA +L
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPK-NDVVP----WSFMIARFCQNGFCNEAVDLFIR 338
Query: 395 MP---MEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV--LLSNIYSASH 449
M + PN ++L GC + K + L E L+ L+ ++ YV L ++Y+
Sbjct: 339 MREAFVVPNEFTLSSILNGCAIGKCSGLGEQ-LHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 450 KWNDAAKIRSMMGDK 464
K + A K+ + + K
Sbjct: 398 KMDTAVKLFAELSSK 412
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/538 (41%), Positives = 333/538 (61%), Gaps = 18/538 (3%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINE-GNLEEAINMFRRLLHRG-LKPDSFSIVRVLTAC 141
A +VFD I + + W +I ++ EEA ++R++L RG PD + VL AC
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 142 TQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWS 201
+ S K +H + + G G +V+V L+ LY CG ++ AR+VFD+MPE+ +VSW+
Sbjct: 162 AYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWN 221
Query: 202 SMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERN 261
SMI G AL +F MQR + +P+ YTM VLSACA LG+L LG WA +F+ R
Sbjct: 222 SMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK 280
Query: 262 ---EFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAF 318
+ + ++ +LI+MY KCG + A +VF+ M+ +D WNA++ G + +G + A
Sbjct: 281 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAM 340
Query: 319 GVFGQL--EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
F ++ ++ ++PN TFVGLL C H G V++GRQ+F+ M R + + P +EHYGC+V
Sbjct: 341 NFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIV 400
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALL-AGCRLHKKTDLAEHVLNQLIALEPWN- 434
DL+ R+G + EA +++ SMPM+P+A++W +LL A C+ +L+E + +I + N
Sbjct: 401 DLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNE 460
Query: 435 ------SGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGD 488
SG YVLLS +Y+++ +WND +R +M + GI+K GCS +E++G+ HEF GD
Sbjct: 461 SSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGD 520
Query: 489 NSHPLSEKIYSKLDELATKLKAAGFVPTTDHV-LFDIEEE-EKQYFLACHSEKLALAFGL 546
SHP +++IY +L + +L++ G++P L D + K+Y L HSE+LA+AFGL
Sbjct: 521 TSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGL 580
Query: 547 ITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I P+ IRI KNLRVC DCHE KLISK+ EIIVRD RFH F +GSCSC D+W
Sbjct: 581 INLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 169/310 (54%), Gaps = 11/310 (3%)
Query: 12 QHAIEFYNSMRNEG-FLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 70
+ A Y M G P TFPFVLKACA F G + H IVK G D +V
Sbjct: 132 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNG 191
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++LY CG L A KVFD++P++++VSW ++I + G + A+ +FR + R +PD
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFRE-MQRSFEPD 250
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARR 187
+++ VL+AC LG LS W H ++ + +V V SL+++Y KCG++ A +
Sbjct: 251 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 310
Query: 188 VFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNM--QRENLKPEYYTMVGVLSACASL 245
VF M ++D+ SW++MI G+A++G +EA++ F M +REN++P T VG+L AC
Sbjct: 311 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 370
Query: 246 GALELGVWASSFMERNEFLSNPVLGT--TLIDMYAKCGRMAQACKVFREMKDK-DQVVWN 302
G + G M R ++ P L ++D+ A+ G + +A + M K D V+W
Sbjct: 371 GFVNKGRQYFDMMVR-DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWR 429
Query: 303 AVVSGLSMNG 312
+++ G
Sbjct: 430 SLLDACCKKG 439
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 132/300 (44%), Gaps = 9/300 (3%)
Query: 136 RVLTACTQLGDLSTAKWIHGYV---NEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQM 192
R+ + D+S K +H + + +F+ ++ L + ++ A RVFD +
Sbjct: 50 RIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 109
Query: 193 PEKDIVSWSSMIQGYASNGFPKEALDMFYN--MQRENLKPEYYTMVGVLSACASLGALEL 250
W+++I+ A + KE M Y ++R P+ +T VL ACA +
Sbjct: 110 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE 169
Query: 251 GVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSM 310
G + ++ F + + LI +Y CG + A KVF EM ++ V WN+++ L
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 229
Query: 311 NGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
G A +F ++++ +P+G T +L C G + G + R + ++
Sbjct: 230 FGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 371 HY--GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLI 428
++++ + G L A ++ + M + + W A++ G H + + A + ++++
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGM-QKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/589 (38%), Positives = 346/589 (58%), Gaps = 37/589 (6%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLAD--ALKVFDDIPDKNVVSWTAIISGYINEG 110
H +++ GLD ++ T L+ G D A +V + + +N WTA+I GY EG
Sbjct: 69 HGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEG 128
Query: 111 NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVAT 170
+EAI M+ + + P SF+ +L AC + DL+ + H V+V
Sbjct: 129 KFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGN 188
Query: 171 SLVDLYAKCGNMEKARRVFDQMPEKDIVS------------------------------- 199
+++D+Y KC +++ AR+VFD+MPE+D++S
Sbjct: 189 TMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVA 248
Query: 200 WSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
W++M+ G+A N P+EAL+ F M++ ++ + T+ G +SACA LGA + A +
Sbjct: 249 WTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQ 308
Query: 260 RNEFLSNP--VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVA 317
++ + + V+G+ LIDMY+KCG + +A VF M +K+ +++++ GL+ +G + A
Sbjct: 309 KSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEA 368
Query: 318 FGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMV 376
+F + + I+PN TFVG L C+H+GLVD+GRQ F+SM + F + P +HY CMV
Sbjct: 369 LHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMV 428
Query: 377 DLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSG 436
DLLGR+G+L EA ELIK+M +EP+ VWGALL CR+H ++AE L LEP G
Sbjct: 429 DLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIG 488
Query: 437 NYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSW-VEVDGVVHEFLVGDNSHPLSE 495
NY+LLSN+Y+++ W ++R ++ +KG++K SW V+ +G +H+F G+ +HP+S
Sbjct: 489 NYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSN 548
Query: 496 KIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVI 555
KI KL+EL +L G+ P V +D+ + K+ L H+EKLALAF L+TT I
Sbjct: 549 KIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTI 608
Query: 556 RIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
I KNLR+C DCH+ ++L S++TG+ II+RDN RFH F G CSC DFW
Sbjct: 609 TIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 177/354 (50%), Gaps = 38/354 (10%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IRG+ F AI Y MR E P +FTF +LKAC D LG + H+ +
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLR 179
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLE------- 113
C +V +++++YV C + A KVFD++P+++V+SWT +I+ Y GN+E
Sbjct: 180 GFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFE 239
Query: 114 ------------------------EAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
EA+ F R+ G++ D ++ ++AC QLG
Sbjct: 240 SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKY 299
Query: 150 AKWIHGYVNEAG--KGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGY 207
A ++G +V + ++L+D+Y+KCGN+E+A VF M K++ ++SSMI G
Sbjct: 300 ADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGL 359
Query: 208 ASNGFPKEALDMF-YNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
A++G +EAL +F Y + + +KP T VG L AC+ G ++ G M + F
Sbjct: 360 ATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQT-FGVQ 418
Query: 267 PVLG--TTLIDMYAKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVA 317
P T ++D+ + GR+ +A ++ + M + VW A++ ++ ++A
Sbjct: 419 PTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIA 472
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 159/397 (40%), Gaps = 70/397 (17%)
Query: 87 VFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD 146
F +I ++ + +++IS + NL + + +L +GL + + +++ T+LG
Sbjct: 37 TFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLG- 95
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQG 206
+D Y ARRV + + ++ W+++I+G
Sbjct: 96 ------------------------VPMDPY--------ARRVIEPVQFRNPFLWTAVIRG 123
Query: 207 YASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSN 266
YA G EA+ M+ M++E + P +T +L AC ++ L LG + R
Sbjct: 124 YAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF 183
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKD------------------------------- 295
+G T+IDMY KC + A KVF EM +
Sbjct: 184 VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT 243
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAG---LVDEG 352
KD V W A+V+G + N + A F ++EK GI+ + T G + C G D
Sbjct: 244 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 303
Query: 353 RQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
Q + +S + + ++D+ + G ++EA + SM N + +++ G
Sbjct: 304 VQI--AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVFTYSSMILGLA 360
Query: 413 LHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
H + A H+ + ++ + + + SH
Sbjct: 361 THGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSH 397
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/522 (40%), Positives = 327/522 (62%), Gaps = 1/522 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A +F I D + +I GY+N + EEA+ + ++ RG +PD+F+ +L ACT+
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L + K IHG V + G +VFV SL+++Y +CG ME + VF+++ K SWSSM
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 204 IQGYASNGFPKEALDMFYNMQRE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNE 262
+ A G E L +F M E NLK E MV L ACA+ GAL LG+ F+ RN
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
N ++ T+L+DMY KCG + +A +F++M+ ++ + ++A++SGL+++G + A +F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 323 QLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRS 382
++ K G++P+ +V +L C+H+GLV EGR+ F M + + P EHYGC+VDLLGR+
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLS 442
G L+EA E I+S+P+E N ++W L+ CR+ + +L + +L+ L N G+Y+L+S
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLIS 444
Query: 443 NIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLD 502
N+YS W+D A+ R+ + KG+++ G S VE+ G H F+ D SHP ++IY L
Sbjct: 445 NLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLH 504
Query: 503 ELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
++ +LK G+ P +L +++EEEK+ L HS+K+A+AFGL+ T P +I+IA+NLR
Sbjct: 505 QMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLR 564
Query: 563 VCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
+C DCH K IS I REI+VRD NRFH F G+CSCKD+W
Sbjct: 565 MCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 171/310 (55%), Gaps = 5/310 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MIRG+V+ F+ A+ FYN M G P NFT+P +LKAC R + G + H + K G
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLG 162
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
L+ D FV+ SL+N+Y CG + + VF+ + K SW++++S G E + +FR
Sbjct: 163 LEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFR 222
Query: 121 RLLHR-GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ LK + +V L AC G L+ IHG++ N+ V TSLVD+Y KC
Sbjct: 223 GMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKC 282
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G ++KA +F +M +++ +++S+MI G A +G + AL MF M +E L+P++ V VL
Sbjct: 283 GCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVL 342
Query: 240 SACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-DK 296
+AC+ G ++ G V+A E + G L+D+ + G + +A + + + +K
Sbjct: 343 NACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYG-CLVDLLGRAGLLEEALETIQSIPIEK 401
Query: 297 DQVVWNAVVS 306
+ V+W +S
Sbjct: 402 NDVIWRTFLS 411
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/605 (36%), Positives = 355/605 (58%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAR-EHDFQLGVRSHSLIVKA 59
+I G N A+ + + G P +T VLKA + L + H +K
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
D FV T+L++ Y + +A +F+ + ++V+W A+++GY + + + +F
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
+ +G + D F++ V C L ++ K +H Y ++G +++V++ ++D+Y KC
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 565
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G+M A+ FD +P D V+W++MI G NG + A +F M+ + P+ +T+ +
Sbjct: 566 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLA 625
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
A + L ALE G + + ++P +GT+L+DMYAKCG + A +F+ ++ +
Sbjct: 626 KASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 685
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
WNA++ GL+ +G K +F Q++ GI+P+ TF+G+L C+H+GLV E + SM
Sbjct: 686 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 745
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDL 419
+ + P IEHY C+ D LGR+G + +A LI+SM ME +A ++ LLA CR+ T+
Sbjct: 746 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 805
Query: 420 AEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDG 479
+ V +L+ LEP +S YVLLSN+Y+A+ KW++ R+MM ++K G SW+EV
Sbjct: 806 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 865
Query: 480 VVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
+H F+V D S+ +E IY K+ ++ +K G+VP TD L D+EEEEK+ L HSEK
Sbjct: 866 KIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEK 925
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL++T P IR+ KNLRVCGDCH A+K I+K+ REI++RD NRFH F +G CS
Sbjct: 926 LAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICS 985
Query: 600 CKDFW 604
C D+W
Sbjct: 986 CGDYW 990
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 227/441 (51%), Gaps = 10/441 (2%)
Query: 32 TFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDI 91
TF +L + LG + H + +K GLD V SL+N+Y A VFD++
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 92 PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGD-LSTA 150
+++++SW ++I+G G EA+ +F +LL GLKPD +++ VL A + L + LS +
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 436
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
K +H + + + FV+T+L+D Y++ M++A +F++ D+V+W++M+ GY +
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQS 495
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
+ L +F M ++ + + +T+ V C L A+ G ++ ++ + + +
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
+ ++DMY KCG M+ A F + D V W ++SG NG + AF VF Q+ G+
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFF-NSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
P+ T L + +++GRQ N++ + P + +VD+ + G +D+A+
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAY 673
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQL--IALEPWNSGNYVLLSNIYSA 447
L K + M N W A+L G H + + Q+ + ++P + ++ + + S
Sbjct: 674 CLFKRIEM-MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP-DKVTFIGVLSACSH 731
Query: 448 SHKWNDAAK-IRSMMGDKGIQ 467
S ++A K +RSM GD GI+
Sbjct: 732 SGLVSEAYKHMRSMHGDYGIK 752
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 159/327 (48%), Gaps = 6/327 (1%)
Query: 103 ISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGK 162
+S Y++ G + F ++ ++ D + + +L ++ L+ + +H + G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 163 GRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYN 222
+ V+ SL+++Y K AR VFD M E+D++SW+S+I G A NG EA+ +F
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 223 MQRENLKPEYYTMVGVLSACASLG-ALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCG 281
+ R LKP+ YTM VL A +SL L L + +S+ + T LID Y++
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR-N 465
Query: 282 RMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLC 341
R + ++ E + D V WNA+++G + + +F + K G + + T +
Sbjct: 466 RCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 342 GCTHAGLVDEGRQFFN-SMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPN 400
C +++G+Q ++ + L + ++D+ + G + A S+P+ P+
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PD 582
Query: 401 AIVWGALLAGCRLHKKTDLAEHVLNQL 427
+ W +++GC + + + A HV +Q+
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQM 609
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 158/346 (45%), Gaps = 36/346 (10%)
Query: 37 LKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNV 96
L+ D LG +H+ I+ + + F+ +L+++Y CG L A +VFD +PD+++
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 97 VSWTAIISGYINEG-----NLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAK 151
VSW +I++ Y N+++A +FR L + ++ +L C G + ++
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 152 WIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNG 211
HGY + G + FVA +LV++Y K G +++ + +F++MP +D+V W+ M++ Y G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 212 FPKEALDMFYNMQRENLKPEYYTM------VGVLSACASLGALELGVWASSFME---RNE 262
F +EA+D+ L P T+ G S + + G ASS E RN+
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNK 285
Query: 263 FLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFG 322
LS Y G+ + K F +M + D V + V L + VKV G
Sbjct: 286 GLSE----------YLHSGQYSALLKCFADMVESD-VECDQVTFILMLATAVKVDSLALG 334
Query: 323 QLEKCGIQPNG--------NTFVGLLCGCTHAGLVDEGRQFFNSMS 360
Q C G N+ + + C G R F++MS
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF---ARTVFDNMS 377
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 54/409 (13%)
Query: 12 QHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSL 71
Q A + +R + + T +LK C H K GLD DEFV +L
Sbjct: 127 QQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGAL 186
Query: 72 LNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDS 131
+N+Y+ G + + +F+++P ++VV W ++ Y+ G EEAI++ GL P+
Sbjct: 187 VNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNE 246
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQ 191
++ R+L + GD S A + + N GN D
Sbjct: 247 ITL-RLLARIS--GDDSDAGQVKSFAN---------------------GN--------DA 274
Query: 192 MPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELG 251
+I+ + + Y +G L F +M +++ + T + +L+ + +L LG
Sbjct: 275 SSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALG 334
Query: 252 VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMN 311
+ + +LI+MY K + A VF M ++D + WN+V++G++ N
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 312 GYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF----------FNSMSR 361
G A +F QL +CG++P+ T +L A + EG N++S
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVL---KAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 362 VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
F T +I+ Y R+ + EA L + + + W A++AG
Sbjct: 452 SFVSTALIDAY-------SRNRCMKEAEILFERHNFD--LVAWNAMMAG 491
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/635 (35%), Positives = 351/635 (55%), Gaps = 31/635 (4%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
+I G+ + A++ YN+M R+ T T +LK + LG + H ++K
Sbjct: 109 LIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKL 168
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVV---------------------- 97
G + V + LL +Y + G ++DA KVF + D+N V
Sbjct: 169 GFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF 228
Query: 98 --------SWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLST 149
SW A+I G G +EAI FR + +GLK D + VL AC LG ++
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 150 AKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYAS 209
K IH + +++V ++L+D+Y KC + A+ VFD+M +K++VSW++M+ GY
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348
Query: 210 NGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVL 269
G +EA+ +F +MQR + P++YT+ +SACA++ +LE G + + +
Sbjct: 349 TGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTV 408
Query: 270 GTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGI 329
+L+ +Y KCG + + ++F EM +D V W A+VS + G +F ++ + G+
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 330 QPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAH 389
+P+G T G++ C+ AGLV++G+++F M+ + + P I HY CM+DL RSG+L+EA
Sbjct: 469 KPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAM 528
Query: 390 ELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASH 449
I MP P+AI W LL+ CR ++ + LI L+P + Y LLS+IY++
Sbjct: 529 RFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKG 588
Query: 450 KWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLK 509
KW+ A++R M +K ++K G SW++ G +H F D S P ++IY+KL+EL K+
Sbjct: 589 KWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKII 648
Query: 510 AAGFVPTTDHVLFDIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHE 569
G+ P T V D+EE K L HSE+LA+AFGLI IR+ KNLRVC DCH
Sbjct: 649 DNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHN 708
Query: 570 AIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
A K IS +TGREI+VRD RFH F +G+CSC DFW
Sbjct: 709 ATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 189/418 (45%), Gaps = 47/418 (11%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P F + ++ A A R I + L F +LL Y G +++
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL----FSWNNLLLAYSKAGLISEMEST 94
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR-GLKPDSFSIVRVLTACTQLGD 146
F+ +PD++ V+W +I GY G + A+ + ++ +++ +L + G
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 147 LSTAKWIHGYVNEAGKGRNVFVATSLVDLYAK---------------------------- 178
+S K IHG V + G + V + L+ +YA
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 179 ---CGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
CG +E A ++F M EKD VSW++MI+G A NG KEA++ F M+ + LK + Y
Sbjct: 215 LLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
VL AC LGA+ G + + R F + +G+ LIDMY KC + A VF MK
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
K+ V W A+V G G + A +F +++ GI P+ T + C + ++EG QF
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 356 FNSMSRVFSLTPMIEHY----GCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLA 409
++T + HY +V L G+ G +D++ L M + +A+ W A+++
Sbjct: 394 HGK-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVS 445
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 36/298 (12%)
Query: 165 NVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQ 224
N+F +L+ Y+K G + + F+++P++D V+W+ +I+GY+ +G A+ + M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 225 RE-NLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRM 283
R+ + T++ +L +S G + LG + + F S ++G+ L+ MYA G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 284 AQACKVFREMKD------------------------------KDQVVWNAVVSGLSMNGY 313
+ A KVF + D KD V W A++ GL+ NG
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 314 VKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYG 373
K A F +++ G++ + F +L C G ++EG+Q + R + I
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGS 309
Query: 374 CMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
++D+ + L A + M + N + W A++ G + +T AE + + ++
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVG---YGQTGRAEEAVKIFLDMQ 363
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/609 (36%), Positives = 333/609 (54%), Gaps = 32/609 (5%)
Query: 28 PTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKV 87
P T+ +++ C++ + G + H I +G + LL +Y CG L DA KV
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 88 FDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR---------------------- 125
FD++P++++ SW +++GY G LEEA +F + +
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 126 ----------GLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDL 175
+P+ F++ + A + + K IHG++ AG + + +SL+D+
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 176 YAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTM 235
Y KCG +++AR +FD++ EKD+VSW+SMI Y + +E +F + +P YT
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 236 VGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKD 295
GVL+ACA L ELG +M R F ++L+DMY KCG + A V
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK 382
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQF 355
D V W +++ G + NG A F L K G +P+ TFV +L CTHAGLV++G +F
Sbjct: 383 PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 442
Query: 356 FNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHK 415
F S++ L+ +HY C+VDLL RSG+ ++ +I MPM+P+ +W ++L GC +
Sbjct: 443 FYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYG 502
Query: 416 KTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWV 475
DLAE +L +EP N YV ++NIY+A+ KW + K+R M + G+ K G SW
Sbjct: 503 NIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWT 562
Query: 476 EVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC 535
E+ H F+ D SHP+ +I L EL K+K G+VP T VL D+E+E+K+ L
Sbjct: 563 EIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVY 622
Query: 536 HSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIE 595
HSEKLA+AF +++T I++ KNLR C DCH AIK IS IT R+I VRD+ RFHCF
Sbjct: 623 HSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFEN 682
Query: 596 GSCSCKDFW 604
G CSC D+W
Sbjct: 683 GQCSCGDYW 691
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 189/366 (51%), Gaps = 6/366 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSM-RNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
M+ G+V D + A+ Y+ M R P FT + A A + G H IV+A
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GLD DE + +SL+++Y CG + +A +FD I +K+VVSWT++I Y E ++F
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
L+ +P+ ++ VL AC L K +HGY+ G F ++SLVD+Y KC
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
GN+E A+ V D P+ D+VSW+S+I G A NG P EAL F + + KP++ T V VL
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 240 SACASLGALELGV-WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK-D 297
SAC G +E G+ + S E++ T L+D+ A+ GR Q V EM K
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 298 QVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQP-NGNTFVGLLCGCTHAGLVDEGRQFF 356
+ +W +V+ G S G + +A +L K I+P N T+V + AG +E +
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEEEGKMR 545
Query: 357 NSMSRV 362
M +
Sbjct: 546 KRMQEI 551
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 175/368 (47%), Gaps = 40/368 (10%)
Query: 112 LEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATS 171
L EA+ +LL R KP + + ++ C+Q L K +H ++ +G + +
Sbjct: 70 LREAV----QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 172 LVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGF------------------- 212
L+ +YAKCG++ AR+VFD+MP +D+ SW+ M+ GYA G
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSW 185
Query: 213 ------------PKEALDMFYNMQR-ENLKPEYYTMVGVLSACASLGALELGVWASSFME 259
P+EAL ++ MQR N +P +T+ ++A A++ + G +
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 260 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 319
R S+ VL ++L+DMY KCG + +A +F ++ +KD V W +++ + + F
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFS 305
Query: 320 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLL 379
+F +L +PN TF G+L C + G+Q M+RV P +VD+
Sbjct: 306 LFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVDMY 364
Query: 380 GRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYV 439
+ G ++ A ++ P +P+ + W +L+ GC + + D A + L L+ ++V
Sbjct: 365 TKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLL--LKSGTKPDHV 421
Query: 440 LLSNIYSA 447
N+ SA
Sbjct: 422 TFVNVLSA 429
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/605 (37%), Positives = 349/605 (57%), Gaps = 2/605 (0%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
MI G++ + + ++ + ++ F P T VL+AC D L ++ ++KAG
Sbjct: 279 MICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ V+ L+++Y CG + A VF+ + K+ VSW +IISGYI G+L EA+ +F+
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFK 397
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ + D + + +++ T+L DL K +H ++G ++ V+ +L+D+YAKCG
Sbjct: 398 MMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCG 457
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
+ + ++F M D V+W+++I G L + M++ + P+ T + L
Sbjct: 458 EVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLP 517
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
CASL A LG + R + S +G LI+MY+KCG + + +VF M +D V
Sbjct: 518 MCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
W ++ M G + A F +EK GI P+ F+ ++ C+H+GLVDEG F M
Sbjct: 578 WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
+ + PMIEHY C+VDLL RS ++ +A E I++MP++P+A +W ++L CR + A
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETA 697
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E V ++I L P + G +L SN Y+A KW+ + IR + DK I K G SW+EV
Sbjct: 698 ERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKN 757
Query: 481 VHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLAC-HSEK 539
VH F GD+S P SE IY L+ L + + G++P V ++EEEE++ L C HSE+
Sbjct: 758 VHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSER 817
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+AFGL+ T P +++ KNLRVCGDCHE KLISKI GREI+VRD NRFH F +G+CS
Sbjct: 818 LAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCS 877
Query: 600 CKDFW 604
CKD W
Sbjct: 878 CKDRW 882
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 216/412 (52%), Gaps = 5/412 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+IR F N F A+EFY +R P +TFP V+KACA D ++G + I+ G
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
+ D FV +L+++Y G L A +VFD++P +++VSW ++ISGY + G EEA+ ++
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
L + + PDSF++ VL A L + + +HG+ ++G V V LV +Y K
Sbjct: 197 ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
ARRVFD+M +D VS+++MI GY +E++ MF + KP+ T+ VL
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLR 315
Query: 241 ACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVV 300
AC L L L + ++M + F+ + LID+YAKCG M A VF M+ KD V
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 301 WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFF-NSM 359
WN+++SG +G + A +F + Q + T++ L+ T + G+ N +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGC 411
+ + + ++D+ + G++ ++ ++ SM + + W +++ C
Sbjct: 436 KSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISAC 484
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 201/387 (51%), Gaps = 8/387 (2%)
Query: 27 LPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALK 86
+ T + PF+ +A + + R H+L++ GLD +F L++ Y H A +L
Sbjct: 1 MQTRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLS 60
Query: 87 VFDDI-PDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLG 145
VF + P KNV W +II + G EA+ + +L + PD ++ V+ AC L
Sbjct: 61 VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 146 DLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQ 205
D ++ + + G ++FV +LVD+Y++ G + +AR+VFD+MP +D+VSW+S+I
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 206 GYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLS 265
GY+S+G+ +EAL++++ ++ + P+ +T+ VL A +L ++ G F ++ S
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 266 NPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLE 325
V+ L+ MY K R A +VF EM +D V +N ++ G V+ + +F LE
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LE 298
Query: 326 KCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-FSLTPMIEHYGCMVDLLGRSG 383
+P+ T +L C H + + +N M + F L + + ++D+ + G
Sbjct: 299 NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCG 356
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAG 410
+ A ++ SM + + + W ++++G
Sbjct: 357 DMITARDVFNSMECK-DTVSWNSIISG 382
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/545 (39%), Positives = 333/545 (61%), Gaps = 10/545 (1%)
Query: 62 DCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRR 121
D D +TS+++ G + +A ++FD++ +++V++WT +++GY +++A +F
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 122 LLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGN 181
+ + S +L Q G + A+ + E + V +++ + G
Sbjct: 229 MPEK----TEVSWTSMLMGYVQNGRIEDAEELF----EVMPVKPVIACNAMISGLGQKGE 280
Query: 182 MEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSA 241
+ KARRVFD M E++ SW ++I+ + NGF EALD+F MQ++ ++P + T++ +LS
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 242 CASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVW 301
CASL +L G + + R +F + + + L+ MY KCG + ++ +F KD ++W
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400
Query: 302 NAVVSGLSMNGYVKVAFGVFGQLEKCG-IQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMS 360
N+++SG + +G + A VF ++ G +PN TFV L C++AG+V+EG + + SM
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460
Query: 361 RVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLA 420
VF + P+ HY CMVD+LGR+G+ +EA E+I SM +EP+A VWG+LL CR H + D+A
Sbjct: 461 SVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA 520
Query: 421 EHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGV 480
E +LI +EP NSG Y+LLSN+Y++ +W D A++R +M + ++K GCSW EV+
Sbjct: 521 EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENK 580
Query: 481 VHEFLVGD-NSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQYFLACHSEK 539
VH F G NSHP E I LDEL L+ AG+ P + L D++EEEK L HSE+
Sbjct: 581 VHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSER 640
Query: 540 LALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCS 599
LA+A+ L+ + IR+ KNLRVC DCH AIK+ISK+ REII+RD NRFH F G CS
Sbjct: 641 LAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECS 700
Query: 600 CKDFW 604
CKD+W
Sbjct: 701 CKDYW 705
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 173/351 (49%), Gaps = 32/351 (9%)
Query: 71 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 130
L++ Y+ G + +A KVFD +P++NVVSWTA++ GY++ G ++ A ++F ++ + +
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----N 140
Query: 131 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFD 190
S +L Q G + A ++ + + ++ TS++ K G +++AR +FD
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPD----KDNIARTSMIHGLCKEGRVDEAREIFD 196
Query: 191 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALEL 250
+M E+ +++W++M+ GY N +A +F ++ PE + S ++ +
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEV--------SWTSMLM 242
Query: 251 GVWASSFMERNEFL-----SNPVLG-TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAV 304
G + +E E L PV+ +I + G +A+A +VF MK+++ W V
Sbjct: 243 GYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTV 302
Query: 305 VSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRV-F 363
+ NG+ A +F ++K G++P T + +L C + G+Q + R F
Sbjct: 303 IKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF 362
Query: 364 SLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLH 414
+ + ++ + + G+L ++ + P + + I+W ++++G H
Sbjct: 363 DVDVYVA--SVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASH 410
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 155/356 (43%), Gaps = 66/356 (18%)
Query: 79 GYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVL 138
G + +A K+FD K++ SW ++++GY +A +F + PD
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PD-------- 76
Query: 139 TACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIV 198
RN+ LV Y K G +++AR+VFD MPE+++V
Sbjct: 77 -------------------------RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 199 SWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFM 258
SW+++++GY NG A +F+ M +N ++G L A +L
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL-------- 163
Query: 259 ERNEFLSNP--VLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKV 316
E + + + T++I K GR+ +A ++F EM ++ + W +V+G N V
Sbjct: 164 --YEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDD 221
Query: 317 AFGVFGQL-EKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCM 375
A +F + EK + ++ +L G G +++ + F V + P+I M
Sbjct: 222 ARKIFDVMPEKTEV-----SWTSMLMGYVQNGRIEDAEELFE----VMPVKPVIA-CNAM 271
Query: 376 VDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALE 431
+ LG+ G++ +A + SM E N W ++ ++H++ L+ I ++
Sbjct: 272 ISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI---KIHERNGFELEALDLFILMQ 323
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Query: 13 HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 72
A++ + M+ +G PT T +L CA G + H+ +V+ D D +V + L+
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLM 373
Query: 73 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRL-LHRGLKPDS 131
+Y+ CG L + +FD P K+++ W +IISGY + G EEA+ +F + L KP+
Sbjct: 374 TMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNE 433
Query: 132 FSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVA--TSLVDLYAKCGNMEKARRVF 189
+ V L+AC+ G + I+ + E+ G A +VD+ + G +A +
Sbjct: 434 VTFVATLSACSYAGMVEEGLKIYESM-ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI 492
Query: 190 DQMP-EKDIVSWSSMI 204
D M E D W S++
Sbjct: 493 DSMTVEPDAAVWGSLL 508
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 124/260 (47%), Gaps = 27/260 (10%)
Query: 177 AKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMV 236
++ G + +AR++FD K I SW+SM+ GY +N P++A +F M N+ +
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI----ISWN 83
Query: 237 GVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDK 296
G++S G ++ M N V T L+ Y G++ A +F +M +K
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 297 DQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTF--VGLLCGCTHAGLVDEGRQ 354
++V W ++ G +G + A ++ + P+ + ++ G G VDE R+
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKLYEMI------PDKDNIARTSMIHGLCKEGRVDEARE 193
Query: 355 FFNSMSR--VFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCR 412
F+ MS V + T M+ Y G++ ++D+A ++ MP E + W ++L G
Sbjct: 194 IFDEMSERSVITWTTMVTGY-------GQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYV 245
Query: 413 LHKKTDLAEHVLNQLIALEP 432
+ + + AE + +++ ++P
Sbjct: 246 QNGRIEDAEELF-EVMPVKP 264
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 267 PVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEK 326
P I ++ G++ +A K+F K WN++V+G N + A +F ++
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM-- 74
Query: 327 CGIQPNGN--TFVGLLCGCTHAGLVDEGRQFFNSMSR--VFSLTPMIEHYGCMVDLLGRS 382
P+ N ++ GL+ G G +DE R+ F+ M V S T +++ Y +
Sbjct: 75 ----PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGY-------VHN 123
Query: 383 GQLDEAHELIKSMPMEPNAIVWGALLAG 410
G++D A L MP E N + W +L G
Sbjct: 124 GKVDVAESLFWKMP-EKNKVSWTVMLIG 150
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 322/522 (61%), Gaps = 1/522 (0%)
Query: 84 ALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQ 143
A +F+ + + ++V + ++ GY N E ++F +L G+ PD+++ +L AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 144 LGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSM 203
L + +H + G NV+V +L+++Y +C +++ AR VFD++ E +V +++M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 204 IQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEF 263
I GYA P EAL +F MQ + LKP T++ VLS+CA LG+L+LG W + +++ F
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 264 LSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQ 323
+ T LIDM+AKCG + A +F +M+ KD W+A++ + +G + + +F +
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 324 LEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSG 383
+ +QP+ TF+GLL C+H G V+EGR++F+ M F + P I+HYG MVDLL R+G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 384 QLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSN 443
L++A+E I +P+ P ++W LLA C H DLAE V ++ L+ + G+YV+LSN
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 444 IYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDE 503
+Y+ + KW +R +M D+ K+ GCS +EV+ VVHEF GD + K++ LDE
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 501
Query: 504 LATKLKAAGFVPTTDHVLF-DIEEEEKQYFLACHSEKLALAFGLITTAPKDVIRIAKNLR 562
+ +LK +G+VP T V+ ++ ++EK+ L HSEKLA+ FGL+ T P IR+ KNLR
Sbjct: 502 MVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLR 561
Query: 563 VCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGSCSCKDFW 604
VC DCH A KLIS I GR++++RD RFH F +G CSC DFW
Sbjct: 562 VCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 186/325 (57%), Gaps = 8/325 (2%)
Query: 1 MIRGFVSNDCFQHAIEFYN---SMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIV 57
M RG+ F + +E ++ + +G LP N+TFP +LKACA + G + H L +
Sbjct: 100 MARGYSR---FTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSM 156
Query: 58 KAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAIN 117
K GLD + +V +L+N+Y C + A VFD I + VV + A+I+GY EA++
Sbjct: 157 KLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALS 216
Query: 118 MFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYA 177
+FR + + LKP+ +++ VL++C LG L KWIH Y + + V V T+L+D++A
Sbjct: 217 LFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFA 276
Query: 178 KCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVG 237
KCG+++ A +F++M KD +WS+MI YA++G ++++ MF M+ EN++P+ T +G
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 238 VLSACASLGALELG-VWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMK-D 295
+L+AC+ G +E G + S + + + + +++D+ ++ G + A + ++
Sbjct: 337 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS 396
Query: 296 KDQVVWNAVVSGLSMNGYVKVAFGV 320
++W +++ S + + +A V
Sbjct: 397 PTPMLWRILLAACSSHNNLDLAEKV 421
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
+M AR +F+ M E DIV ++SM +GY+ P E +F + + + P+ YT +L
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
ACA ALE G + N + TLI+MY +C + A VF + + V
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 300 VWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSM 359
+NA+++G + A +F +++ ++PN T + +L C G +D G+ + +
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK-WIHKY 255
Query: 360 SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
++ S ++ ++D+ + G LD+A + + M + + W A++ H K +
Sbjct: 256 AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAE 313
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/554 (40%), Positives = 330/554 (59%), Gaps = 2/554 (0%)
Query: 53 HSLIVKAGLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNL 112
H+++++ G + T LL V G + A +VFD++ + W + GY+
Sbjct: 31 HAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLP 90
Query: 113 EEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSL 172
E++ +++++ G++PD F+ V+ A +QLGD S +H +V + G G VAT L
Sbjct: 91 FESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATEL 150
Query: 173 VDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEY 232
V +Y K G + A +F+ M KD+V+W++ + G AL+ F M + ++ +
Sbjct: 151 VMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDS 210
Query: 233 YTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFRE 292
+T+V +LSAC LG+LE+G + E N ++ +DM+ KCG A +F E
Sbjct: 211 FTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEE 270
Query: 293 MKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEG 352
MK ++ V W+ ++ G +MNG + A +F ++ G++PN TF+G+L C+HAGLV+EG
Sbjct: 271 MKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEG 330
Query: 353 RQFFNSM--SRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAG 410
+++F+ M S +L P EHY CMVDLLGRSG L+EA+E IK MP+EP+ +WGALL
Sbjct: 331 KRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGA 390
Query: 411 CRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIR 470
C +H+ L + V + L+ P +VLLSNIY+A+ KW+ K+RS M G +K+
Sbjct: 391 CAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVA 450
Query: 471 GCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIEEEEKQ 530
S VE +G +H F GD SHP S+ IY KLDE+ K++ G+VP T V D+E EEK+
Sbjct: 451 AYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKE 510
Query: 531 YFLACHSEKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRF 590
L+ HSEKLA+AFGLI P IR+ KNLR C DCH K +S +T EII+RD NRF
Sbjct: 511 CSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRF 570
Query: 591 HCFIEGSCSCKDFW 604
H F G CSCK+FW
Sbjct: 571 HHFRNGVCSCKEFW 584
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 178/315 (56%), Gaps = 4/315 (1%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAG 60
+ +G+V N ++ Y MR+ G P FT+PFV+KA ++ DF G H+ +VK G
Sbjct: 80 LFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG 139
Query: 61 LDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFR 120
C V T L+ +Y+ G L+ A +F+ + K++V+W A ++ + GN A+ F
Sbjct: 140 FGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFN 199
Query: 121 RLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG 180
++ ++ DSF++V +L+AC QLG L + I+ + N+ V + +D++ KCG
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCG 259
Query: 181 NMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVLS 240
N E AR +F++M ++++VSWS+MI GYA NG +EAL +F MQ E L+P Y T +GVLS
Sbjct: 260 NTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 319
Query: 241 ACASLGALELGVWASSFM-ERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFREMK-DK 296
AC+ G + G S M + N+ P ++D+ + G + +A + ++M +
Sbjct: 320 ACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEP 379
Query: 297 DQVVWNAVVSGLSMN 311
D +W A++ +++
Sbjct: 380 DTGIWGALLGACAVH 394
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 135/299 (45%), Gaps = 8/299 (2%)
Query: 151 KWIHGYVNEAGKGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASN 210
K IH V G + T L++ G+M AR+VFD+M + I W+++ +GY N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 211 GFPKEALDMFYNMQRENLKPEYYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG 270
P E+L ++ M+ ++P+ +T V+ A + LG G + + + F ++
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 271 TTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQ 330
T L+ MY K G ++ A +F M+ KD V WNA ++ G +A F ++ +Q
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 331 PNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHE 390
+ T V +L C G ++ G + ++ +R + I +D+ + G + A
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDR-ARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 391 LIKSMPMEPNAIVWGALLAGCRLH--KKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSA 447
L + M + N + W ++ G ++ + L Q L P NYV + SA
Sbjct: 267 LFEEMK-QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRP----NYVTFLGVLSA 320
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/607 (38%), Positives = 348/607 (57%), Gaps = 42/607 (6%)
Query: 1 MIRGFVSNDCFQHAIEFYNSMRNEGFL-PTNFTFPFVLKACAREHDFQLGVRSHSLIVKA 59
++RG+ +D +++ + M +GF+ P +F+F FV+KA + G + H +K
Sbjct: 76 LVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKH 135
Query: 60 GLDCDEFVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMF 119
GL+ FV T+L+ +Y CG + A KVFD++ N+V+W A+I+ ++ A +F
Sbjct: 136 GLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIF 195
Query: 120 RRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKC 179
++L R + W NV +A Y K
Sbjct: 196 DKMLVR----------------------NHTSW------------NVMLAG-----YIKA 216
Query: 180 GNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPEYYTMVGVL 239
G +E A+R+F +MP +D VSWS+MI G A NG E+ F +QR + P ++ GVL
Sbjct: 217 GELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVL 276
Query: 240 SACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQV 299
SAC+ G+ E G F+E+ + + LIDMY++CG + A VF M++K +
Sbjct: 277 SACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCI 336
Query: 300 V-WNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNS 358
V W ++++GL+M+G + A +F ++ G+ P+G +F+ LL C+HAGL++EG +F+
Sbjct: 337 VSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSE 396
Query: 359 MSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTD 418
M RV+ + P IEHYGCMVDL GRSG+L +A++ I MP+ P AIVW LL C H +
Sbjct: 397 MKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIE 456
Query: 419 LAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQKIRGCSWVEVD 478
LAE V +L L+P NSG+ VLLSN Y+ + KW D A IR M + I+K S VEV
Sbjct: 457 LAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVG 516
Query: 479 GVVHEFLVGDNSHPLSEKIYSKLDELATKLK-AAGFVPTTDHVLFDIEEEEKQYFLACHS 537
+++F G+ + + + KL E+ +LK AG+ P L+D+EEEEK+ ++ HS
Sbjct: 517 KTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHS 576
Query: 538 EKLALAFGLITTAPKDVIRIAKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIEGS 597
EKLALAF L + IRI KNLR+C DCH +KL SK+ G EI+VRD NRFH F +GS
Sbjct: 577 EKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGS 636
Query: 598 CSCKDFW 604
CSC+D+W
Sbjct: 637 CSCRDYW 643
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 146/359 (40%), Gaps = 71/359 (19%)
Query: 137 VLTACTQLGDLSTAKWIHGYVNEAGKGRNVFVATSLVDLYAKCG---NMEKARRVFDQMP 193
+L +C L L+ IHG + G + + L+ L+ + ARR+ P
Sbjct: 11 LLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLCFP 66
Query: 194 EKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLK-PEYYTMVGVLSACASLGALELGV 252
E D ++++++GY+ + P ++ +F M R+ P+ ++ V+ A + +L G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 253 WASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSG----- 307
++ S+ +GTTLI MY CG + A KVF EM + V WNAV++
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 308 ---------------------LSMNGYVKV------------------------------ 316
+ + GY+K
Sbjct: 187 DVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAH 246
Query: 317 ------AFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIE 370
+F F +L++ G+ PN + G+L C+ +G + G+ + + + ++
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA-GYSWIVS 305
Query: 371 HYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIA 429
++D+ R G + A + + M + + W +++AG +H + + A + N++ A
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 364
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,880,315
Number of Sequences: 539616
Number of extensions: 9736764
Number of successful extensions: 28884
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 21419
Number of HSP's gapped (non-prelim): 2075
length of query: 604
length of database: 191,569,459
effective HSP length: 123
effective length of query: 481
effective length of database: 125,196,691
effective search space: 60219608371
effective search space used: 60219608371
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)