BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044874
(269 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255554995|ref|XP_002518535.1| ubiquitin, putative [Ricinus communis]
gi|223542380|gb|EEF43922.1| ubiquitin, putative [Ricinus communis]
Length = 269
Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 233/275 (84%), Gaps = 12/275 (4%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDV FE +G+ F+IE+G+FDTVLEIKEKI+KYQ IP+ KQTLVFNGQVLQD+RD+E+CE
Sbjct: 1 MDVFFETPKGRQFSIELGYFDTVLEIKEKIQKYQDIPINKQTLVFNGQVLQDERDIEYCE 60
Query: 61 ILQNSRIQLLVASDN---KPQVKTEQSSP-SKKIHLKINIPSNSKTHHHHHHLPLDMDVN 116
IL NS IQLL+A DN KPQ+KTE+SSP SKKI L I IPS+ H+P++MDVN
Sbjct: 61 ILHNSHIQLLIAPDNDETKPQIKTEESSPPSKKIQLSIKIPSSKL------HVPIEMDVN 114
Query: 117 DTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATST 176
DT+LRLKEKIHE+ES+PV+RL++QSS EL D+RSLR+ EL+DN+EI V++RPSPT T
Sbjct: 115 DTILRLKEKIHEIESVPVSRLVLQSSNGELLDNRSLRESELLDNSEISVNIRPSPTGLGT 174
Query: 177 TSSG--MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFF 234
S G G +KLKL+VLT+CG ++IPVEVNASDNV ELRKELQKLHQR HFHLPQ+GYFF
Sbjct: 175 GSGGPTAGTKKLKLMVLTKCGTQKIPVEVNASDNVGELRKELQKLHQRLHFHLPQEGYFF 234
Query: 235 IYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
IYKQNVMDDDRSFRWHHV QGDTIEIFNGSVTGGS
Sbjct: 235 IYKQNVMDDDRSFRWHHVCQGDTIEIFNGSVTGGS 269
>gi|224078748|ref|XP_002305613.1| predicted protein [Populus trichocarpa]
gi|222848577|gb|EEE86124.1| predicted protein [Populus trichocarpa]
Length = 260
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/265 (65%), Positives = 215/265 (81%), Gaps = 8/265 (3%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDVIFEPQRG F+IEVGFFDTV EIKEK+ KY GIP+ KQTLVF+GQVLQDD+DVE+CE
Sbjct: 1 MDVIFEPQRGGPFSIEVGFFDTVSEIKEKVHKYHGIPINKQTLVFHGQVLQDDKDVEYCE 60
Query: 61 ILQNSRIQLLVA--SDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDT 118
ILQNSRIQLL+ +D PQ K EQ+S SKK+ L+I IPSN +PL+MD++DT
Sbjct: 61 ILQNSRIQLLITPETDQIPQDKVEQTSHSKKVQLRIKIPSNQTL------VPLEMDMSDT 114
Query: 119 VLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTS 178
VL LKEKI E+E +PV RL++QS+GAELQDH+SL +CEL N+EI V+V+PSP+ + +
Sbjct: 115 VLHLKEKIREIEPVPVKRLVLQSNGAELQDHQSLHECELKYNSEISVNVKPSPSGSGSKG 174
Query: 179 SGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQ 238
G +KL+++V+T+CG K+IPVEVN SDNV ELRKELQ L Q+ FHLPQ+GYFFI+KQ
Sbjct: 175 GSTGFKKLRVIVVTKCGTKKIPVEVNPSDNVGELRKELQDLQQKNQFHLPQEGYFFIHKQ 234
Query: 239 NVMDDDRSFRWHHVGQGDTIEIFNG 263
+VMDDDRSFRWH V QGDTI++FNG
Sbjct: 235 DVMDDDRSFRWHRVNQGDTIDVFNG 259
>gi|225444387|ref|XP_002265032.1| PREDICTED: uncharacterized protein LOC100252194 [Vitis vinifera]
Length = 284
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/295 (54%), Positives = 205/295 (69%), Gaps = 37/295 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDVIFEPQ G+ F++E+GFFDTVLEIKEK++KY GIP +QTL FNG +LQD+RD+ +
Sbjct: 1 MDVIFEPQGGEPFSLELGFFDTVLEIKEKVQKYHGIPASRQTLFFNGHLLQDNRDIPSMQ 60
Query: 61 ILQNSRIQLLVASDNKPQ-----VKTEQSSPSK---------------------KIHLKI 94
+ N RIQ++++ D + + E S P KI + +
Sbjct: 61 MFYNCRIQMIISPDPPSEMPPPLINIEDSPPPNNLQEDPSPPPPPPLPPPPPSTKIQILL 120
Query: 95 NIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
IP++ HL ++MD+ TV RLKEKIHEME IPVNR+++ G ELQD RSLRD
Sbjct: 121 RIPTSKI------HLSIEMDLAHTVGRLKEKIHEMEGIPVNRMVLYWRGRELQDSRSLRD 174
Query: 155 CELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRK 214
CEL D +EIDV ++P P A SG G ++LKL+V+++CG K++PVEVN DNV ELRK
Sbjct: 175 CELSDRSEIDVGIKPLPAA-----SGSGSKRLKLMVMSKCGTKKVPVEVNPLDNVGELRK 229
Query: 215 ELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
EL+KL QR+ FHLP +GYFFIYKQNVMDDDRSFRWHHVGQGDT+EIFNG VTGGS
Sbjct: 230 ELEKLDQRFQFHLPPEGYFFIYKQNVMDDDRSFRWHHVGQGDTVEIFNGCVTGGS 284
>gi|147781462|emb|CAN76119.1| hypothetical protein VITISV_033883 [Vitis vinifera]
Length = 284
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/295 (54%), Positives = 205/295 (69%), Gaps = 37/295 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDVIFEPQ G+ F++E+GFFDTVLEIKEK++KY GIP +QTL FNG +LQD+RD+ +
Sbjct: 1 MDVIFEPQGGEPFSLELGFFDTVLEIKEKVQKYHGIPASRQTLFFNGHLLQDNRDIPSMQ 60
Query: 61 ILQNSRIQLLVASDNKPQ-----VKTEQSSPSK---------------------KIHLKI 94
+ N RIQ++++ D + + E S P KI + +
Sbjct: 61 MFYNCRIQMIISPDPPSEMPPPLINIEDSPPPNNLQEDPSPPPPPPLPPPPPSTKIQILL 120
Query: 95 NIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
IP++ HL ++MD+ TV RLKEKIHEME IPVNR+++ G ELQD RSLRD
Sbjct: 121 RIPTSKI------HLSIEMDLAHTVGRLKEKIHEMEXIPVNRMVLYWRGRELQDSRSLRD 174
Query: 155 CELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRK 214
CEL D +EIDV ++P P A SG G ++LKL+V+++CG K++PVEVN DNV ELRK
Sbjct: 175 CELSDRSEIDVGIKPLPAA-----SGSGSKRLKLMVMSKCGTKKVPVEVNPLDNVGELRK 229
Query: 215 ELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
EL+KL QR+ FHLP +GYFFIYKQNVMDDDRSFRWHHVGQGDT+EIFNG VTGGS
Sbjct: 230 ELEKLDQRFQFHLPPEGYFFIYKQNVMDDDRSFRWHHVGQGDTVEIFNGCVTGGS 284
>gi|357462215|ref|XP_003601389.1| hypothetical protein MTR_3g080180 [Medicago truncatula]
gi|355490437|gb|AES71640.1| hypothetical protein MTR_3g080180 [Medicago truncatula]
Length = 265
Score = 319 bits (818), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 155/273 (56%), Positives = 206/273 (75%), Gaps = 12/273 (4%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDVIFE QRG+ F+IEVGFFDT+LEIKEKI+KYQGIP+ KQTL+FNGQ+L +D D+ C
Sbjct: 1 MDVIFEVQRGRPFSIEVGFFDTILEIKEKIQKYQGIPISKQTLIFNGQILPEDGDIWKCA 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I QNSRI L+V + K Q K+HL I PS+ + P+++ NDTVL
Sbjct: 61 IFQNSRIHLIVTASESDHHK--QPIEDTKLHLNIKTPSSKP------YFPIEIYKNDTVL 112
Query: 121 RLKEKIHEME--SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRP--SPTATST 176
+LKEKIH+++ ++P+N+L++ ++ EL D++ +RDC++ D +EI+V +P P + T
Sbjct: 113 KLKEKIHDIDQNNVPLNQLMLHAADTELHDNQLIRDCDVSDKSEIEVSFKPPAGPAVSPT 172
Query: 177 TSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIY 236
G G +KLK +VL++ G K+IPVE+NA+DNV ELRKELQK++QR FHLPQ+GYFFI+
Sbjct: 173 MVGGGGSKKLKFMVLSKSGTKKIPVEMNATDNVGELRKELQKMNQRLQFHLPQEGYFFIF 232
Query: 237 KQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
KQNVMDD++SFRWHHV QGDTIEIFNGSVTGGS
Sbjct: 233 KQNVMDDEKSFRWHHVCQGDTIEIFNGSVTGGS 265
>gi|356577793|ref|XP_003557007.1| PREDICTED: uncharacterized protein LOC100790784 [Glycine max]
Length = 267
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 170/274 (62%), Positives = 208/274 (75%), Gaps = 12/274 (4%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++IFE Q G++F++EVG+FDTVLEIKEK++KYQ IPV KQ L+ NGQVL D+ D E
Sbjct: 1 MNIIFELQGGRSFSMEVGYFDTVLEIKEKVQKYQNIPVSKQILILNGQVLHDNDDPWKVE 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVN-DTV 119
IL N+RIQL V + K + S +++N+ + SKTH +PL++DVN DTV
Sbjct: 61 ILHNTRIQLQVTPKKEENSK-DLVVNSTHTKIQLNVKTASKTHV----IPLEVDVNNDTV 115
Query: 120 LRLKEKIHEME--SIPVNRLLV--QSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATS 175
LRLKE+IHEME ++PVNRLL S+G E+ DH+ LRDC + +NAEIDV RPSP A +
Sbjct: 116 LRLKERIHEMETVAVPVNRLLFLHSSNGVEMLDHQLLRDCYVSENAEIDVGFRPSPPAAA 175
Query: 176 TTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFI 235
+ S G ++LKL+VL + G K++PVEVN SDNV ELRKELQKLHQR FHLPQDGYFFI
Sbjct: 176 SASPGS--KRLKLMVLPKSGTKKVPVEVNPSDNVGELRKELQKLHQRVQFHLPQDGYFFI 233
Query: 236 YKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
YKQNVMDDDRSFRWHHV QGDTIEIFNGSVTGGS
Sbjct: 234 YKQNVMDDDRSFRWHHVAQGDTIEIFNGSVTGGS 267
>gi|302144066|emb|CBI23171.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/269 (53%), Positives = 174/269 (64%), Gaps = 65/269 (24%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDVIFEPQ G+ F++E+GFFDTVLEIKEK++KY GIP +QTL FNG +LQD+RD+ +
Sbjct: 1 MDVIFEPQGGEPFSLELGFFDTVLEIKEKVQKYHGIPASRQTLFFNGHLLQDNRDIPSMQ 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I+ P+ KIHL I +MD+ TV
Sbjct: 61 II-----------------------PTSKIHLSI-----------------EMDLAHTVG 80
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
RLKEKIHEME IPVNR+++ G ELQD RSLRDCEL D
Sbjct: 81 RLKEKIHEMEGIPVNRMVLYWRGRELQDSRSLRDCELSD--------------------- 119
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
+LKL+V+++CG K++PVEVN DNV ELRKEL+KL QR+ FHLP +GYFFIYKQNV
Sbjct: 120 ----RLKLMVMSKCGTKKVPVEVNPLDNVGELRKELEKLDQRFQFHLPPEGYFFIYKQNV 175
Query: 241 MDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
MDDDRSFRWHHVGQGDT+EIFNG VTGGS
Sbjct: 176 MDDDRSFRWHHVGQGDTVEIFNGCVTGGS 204
>gi|225439205|ref|XP_002270133.1| PREDICTED: polyubiquitin [Vitis vinifera]
gi|147834449|emb|CAN76405.1| hypothetical protein VITISV_042107 [Vitis vinifera]
Length = 265
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 177/272 (65%), Gaps = 17/272 (6%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MD+ FEP G+ F IEVGFFDTVLEIKEKI+KYQ IPV QTL+FNG+VLQD+ +V +
Sbjct: 1 MDIFFEPFSGEGFCIEVGFFDTVLEIKEKIQKYQNIPVAAQTLIFNGEVLQDESNVHSSD 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSP----SKKIHLKINIPSNSKTHHHHHHLPLDMDVN 116
++ NS IQL+ + KP K E S P + ++ L INIP++ PL M
Sbjct: 61 LVHNSYIQLISSCPEKPATKAESSPPLSPAASRVQLLINIPTSKS-----QQFPLCMHSR 115
Query: 117 DTVLRLKEKIHE-MESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATS 175
T+ LKE IH ME++ V +L++ S G+ELQDH SL L D +EIDV +S
Sbjct: 116 GTIRELKENIHAVMETLCVQQLVLYSDGSELQDHWSLHQSGLSDGSEIDVGFMAGAMGSS 175
Query: 176 TTSSGMGPRKLK-LLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFF 234
+KLK ++VL +CG K+ VEVN SD V LR EL KL + F+LP+DGY+F
Sbjct: 176 CF------KKLKVMVVLPRCGGKKTAVEVNGSDKVRVLRMELDKLQKCLQFYLPKDGYYF 229
Query: 235 IYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVT 266
IYK++VMD+DRSFRWHHVGQGDTI+I S++
Sbjct: 230 IYKEHVMDEDRSFRWHHVGQGDTIDISPTSIS 261
>gi|297809715|ref|XP_002872741.1| hypothetical protein ARALYDRAFT_490171 [Arabidopsis lyrata subsp.
lyrata]
gi|297318578|gb|EFH49000.1| hypothetical protein ARALYDRAFT_490171 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/276 (44%), Positives = 148/276 (53%), Gaps = 78/276 (28%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDV FE + G F IE+G++DTVLEIK+KIEKYQ IPV KQTL F G VLQD D+E C
Sbjct: 1 MDVFFETRSGFTFEIELGYWDTVLEIKQKIEKYQQIPVSKQTLFFQGNVLQDHLDIEQCV 60
Query: 61 ILQNSRIQLLVAS----DNKPQVKTEQSSPSKKIHLKINIPSNSK---THHHHHHLPLDM 113
IL +SRIQL ++S N KTEQS SNSK T++ H P+ M
Sbjct: 61 ILNHSRIQLFISSPDQNRNNQVFKTEQSP-----------QSNSKEQITNNGHQDSPVMM 109
Query: 114 DVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTA 173
+++ +K+ R++V L C
Sbjct: 110 PMSNNNNNNPKKL---------RVMV------------LPKC------------------ 130
Query: 174 TSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYF 233
G RK+ PVEVNA DNV ELRKEL K+ QR LPQ+GYF
Sbjct: 131 --------GTRKI-------------PVEVNAGDNVGELRKELAKIQQRLQLSLPQEGYF 169
Query: 234 FIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
FIYKQNVMD++RSFRWH V GDTIEIFNGSV+GGS
Sbjct: 170 FIYKQNVMDENRSFRWHRVDHGDTIEIFNGSVSGGS 205
>gi|356548435|ref|XP_003542607.1| PREDICTED: uncharacterized protein LOC100794475 [Glycine max]
Length = 196
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 114/176 (64%), Gaps = 23/176 (13%)
Query: 117 DTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATS- 175
DTVL +KEK+ + ++IPV++ + +G L D+ +++ N I + V P
Sbjct: 21 DTVLEIKEKVQKYQNIPVSKQTLILNGQVLHDNDDPWKVKILHNTCIQLQVTPEKEENKE 80
Query: 176 ---------------TTSSGMGP-------RKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
T+ + + P +LKL+VL + G K++PVEVNASDNV ELR
Sbjct: 81 LITSAHTKIQLNVKITSKTHLIPLEVDVNDTRLKLMVLPKSGTKKVPVEVNASDNVGELR 140
Query: 214 KELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
KELQKLHQR FHLPQDGYFFIYKQNVMDDDRSFRWHHV QGDTIEIFNGSVTGGS
Sbjct: 141 KELQKLHQRVQFHLPQDGYFFIYKQNVMDDDRSFRWHHVAQGDTIEIFNGSVTGGS 196
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 7/122 (5%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDVIFE QRG++F++EVG+FDTVLEIKEK++KYQ IPV KQTL+ NGQVL D+ D +
Sbjct: 1 MDVIFELQRGRSFSMEVGYFDTVLEIKEKVQKYQNIPVSKQTLILNGQVLHDNDDPWKVK 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
IL N+ IQL V + K + K +S KI L + I S + H +PL++DVNDT L
Sbjct: 61 ILHNTCIQLQVTPE-KEENKELITSAHTKIQLNVKITSKT------HLIPLEVDVNDTRL 113
Query: 121 RL 122
+L
Sbjct: 114 KL 115
>gi|296085900|emb|CBI31224.3| unnamed protein product [Vitis vinifera]
Length = 210
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 142/270 (52%), Gaps = 68/270 (25%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MD+ FEP G+ F IEVGFFDTVLEIKEKI+KYQ IPV QTL+FNG+VLQD+ +V +
Sbjct: 1 MDIFFEPFSGEGFCIEVGFFDTVLEIKEKIQKYQNIPVAAQTLIFNGEVLQDESNVHSSD 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSP----SKKIHLKINIPSNSKTHHHHHHLPLDMDVN 116
++ NS IQL+ + KP K E S P + ++ L INIP++ PL M
Sbjct: 61 LVHNSYIQLISSCPEKPATKAESSPPLSPAASRVQLLINIPTSKS-----QQFPLCMHSR 115
Query: 117 DTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATST 176
T+ +K+ M +P R + + E+
Sbjct: 116 GTIRDCFKKLKVMVVLP--RCGGKKTAVEVN----------------------------- 144
Query: 177 TSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIY 236
G K+++L + + +L+K LQ F+LP+DGY+FIY
Sbjct: 145 -----GSDKVRVLRM----------------ELDKLQKCLQ-------FYLPKDGYYFIY 176
Query: 237 KQNVMDDDRSFRWHHVGQGDTIEIFNGSVT 266
K++VMD+DRSFRWHHVGQGDTI+I S++
Sbjct: 177 KEHVMDEDRSFRWHHVGQGDTIDISPTSIS 206
>gi|15234664|ref|NP_192432.1| ubiquitin family protein [Arabidopsis thaliana]
gi|7267283|emb|CAB81065.1| putative protein [Arabidopsis thaliana]
gi|332657093|gb|AEE82493.1| ubiquitin family protein [Arabidopsis thaliana]
Length = 206
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 117/192 (60%), Gaps = 33/192 (17%)
Query: 111 LDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR-- 168
+++ DTVL +K+KI + + IPV++ + G LQDH + C +++++ I + +
Sbjct: 15 IELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVILNHSRIQLSISSP 74
Query: 169 ---------------PSPTATSTTSSG----------------MGPRKLKLLVLTQCGNK 197
P +T TS+G P+KL+++VL + G +
Sbjct: 75 DQSRNNIQVFKTEQFPQSNSTEQTSNGHHESTVMIPMSNNNNNNNPKKLRVMVLPKSGTR 134
Query: 198 RIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDT 257
+IPV+VNA DNV ELRKEL K+ QR+ LPQ+GYFFIYKQNVMD++RSFRWH V QGDT
Sbjct: 135 KIPVDVNAGDNVGELRKELAKIQQRFQLSLPQEGYFFIYKQNVMDENRSFRWHRVDQGDT 194
Query: 258 IEIFNGSVTGGS 269
IEIFNGSV+GGS
Sbjct: 195 IEIFNGSVSGGS 206
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 5/88 (5%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDV FE + G F IE+G++DTVLEIK+KIEKYQ IPV KQTL+F G VLQD D+E C
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 61 ILQNSRIQLLVAS-----DNKPQVKTEQ 83
IL +SRIQL ++S +N KTEQ
Sbjct: 61 ILNHSRIQLSISSPDQSRNNIQVFKTEQ 88
>gi|449434372|ref|XP_004134970.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
sativus]
gi|449479667|ref|XP_004155669.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
sativus]
Length = 197
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 112/177 (63%), Gaps = 24/177 (13%)
Query: 117 DTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR-------- 168
DTVL +KEKI + + IP+ + + +G LQD R + CE++ ++ I + V
Sbjct: 21 DTVLEIKEKIEKYQGIPIPKQTLIFNGRILQDDRDVEFCEILQHSRIQLVVANSELSAQS 80
Query: 169 -------------PSPTA---TSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSEL 212
P P++ S T+S KLK++V +CGN +IP+EVN +DNV EL
Sbjct: 81 QIGRLIMKQHNMIPDPSSHHPQSGTTSTKNSNKLKVMVKPKCGNSKIPMEVNPTDNVGEL 140
Query: 213 RKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
+KEL+KL QR FHLP +G+FFIY ++VMD+DRSFRWH V GDTIEIFNG++TGGS
Sbjct: 141 KKELEKLQQRMQFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGTITGGS 197
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 79/104 (75%), Gaps = 4/104 (3%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDVI P++G F IEVG+FDTVLEIKEKIEKYQGIP+PKQTL+FNG++LQDDRDVE CE
Sbjct: 1 MDVILVPEKGDTFGIEVGYFDTVLEIKEKIEKYQGIPIPKQTLIFNGRILQDDRDVEFCE 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHH 104
ILQ+SRIQL+VA+ + QS + I + N+ + +HH
Sbjct: 61 ILQHSRIQLVVANSE----LSAQSQIGRLIMKQHNMIPDPSSHH 100
>gi|222615849|gb|EEE51981.1| hypothetical protein OsJ_33659 [Oryza sativa Japonica Group]
Length = 263
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 141/276 (51%), Gaps = 20/276 (7%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M+V E G+ FT+E+ FF TV IKE + + +GIPV Q L F G L DD D E
Sbjct: 1 MEVTLETVAGRRFTVEIWFFSTVRRIKEYVLRQEGIPVESQRLFFAGAELDDDGDTERYS 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPS---KKIHLKINIPSNSKTHHHHHHLPLDMDVND 117
ILQ S + LL+ D + K +++ + + + + +++D
Sbjct: 61 ILQGSTVLLLLPEDGAAPPSSGGGGGGGGGTKAMVRVVVNAPAALAGKGGAVTVEVDAAA 120
Query: 118 -TVLRLKEKIHEME--SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTAT 174
TV LKE++ E ++P R+ + E++D R++ + +V P A
Sbjct: 121 CTVAGLKERVQEGTDGALPAARVALMFGKVEMEDGRAVAE-----------YVPPGAAAD 169
Query: 175 STTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDG-YF 233
T + + + ++ V + G K VEV+ V +LR EL H LP+DG YF
Sbjct: 170 GTATVVVSAVQPRVTVNVKWGAKAAAVEVSDMLAVKDLRAELGGAAA--HLPLPKDGGYF 227
Query: 234 FIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
FIYKQNVM++DR+ RWH V GDTIEIFNG VTGG+
Sbjct: 228 FIYKQNVMEEDRTLRWHDVKNGDTIEIFNGRVTGGA 263
>gi|226498364|ref|NP_001150859.1| ubiquitin family protein [Zea mays]
gi|195642426|gb|ACG40681.1| ubiquitin family protein [Zea mays]
gi|413934534|gb|AFW69085.1| ubiquitin family protein [Zea mays]
Length = 268
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 148/283 (52%), Gaps = 29/283 (10%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQV-----LQDDRD 55
M+V F G+ FT+EV +F TV E+KE + +GIPV Q GQ L D RD
Sbjct: 1 MEVTFATPGGREFTLEVWYFATVREMKEAVHVREGIPVASQRFFLAGQEDDGLELDDARD 60
Query: 56 VEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDV 115
H I+Q SR+ LL+ D P ++ +H+ ++ P +P
Sbjct: 61 TAHYGIVQGSRVLLLLRDDAPPSASPAPATA---VHVTVSAPEIGLCSVALDDVP----T 113
Query: 116 NDTVLRLKEKIHEME--SIPVNRLLVQSSGAELQDHRSLRDCEL-MDNAEIDVHVRPSPT 172
+DTV RLKE + + ++ + R ++ E++D ++L + + D ++ VR P
Sbjct: 114 SDTVARLKELLQDRTDGALSIARTVLFLGKTEMEDGKTLAEYDPPADGMDLSAVVRQQPL 173
Query: 173 ATSTTSSGMGPR-KLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP--- 228
S G R + ++ V G + +EV A+D V +LRKE+++LH LP
Sbjct: 174 VAS--GGGAEARSQQRIEVSVMFGETVVALEVGATDVVRDLRKEVERLH------LPVRD 225
Query: 229 --QDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
+ YFF+YKQNVMD+DR+ RWH V GDTIEIFNG+VTGG+
Sbjct: 226 SSGNEYFFVYKQNVMDEDRTLRWHEVKNGDTIEIFNGTVTGGA 268
>gi|218196369|gb|EEC78796.1| hypothetical protein OsI_19051 [Oryza sativa Indica Group]
Length = 278
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 140/280 (50%), Gaps = 13/280 (4%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M+V E G+ FT+E+ FF TV IKE + + +GIPV Q L F G L DD D E
Sbjct: 1 MEVTLETVAGRWFTVEIWFFSTVRRIKEYVLRQEGIPVESQRLFFAGAELDDDGDTERYS 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPS---KKIHLKINIPSNSKTHHHHHHLPLDMDVND 117
ILQ S + LL+ D + K +++ + + + + +++D
Sbjct: 61 ILQGSTVLLLLPEDGAAPPSSGGGGGGGGGTKAMVRVVVNAPAALAGKGGAVTVEVDAAA 120
Query: 118 -TVLRLKEKIHEME--SIPVNRLLVQSSGAELQDHRSLRD----CELMDNAEIDVHVRPS 170
TV LKE++ E ++P R+ + E++D R++ + D V
Sbjct: 121 CTVAGLKERVQEGTDGALPAARVALMFGKVEMEDGRAVAEYVPPGAAADGTATVVVSAVV 180
Query: 171 PTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQD 230
T + P++ ++ V + G K VEV+ V +LR EL H LP+D
Sbjct: 181 RPPPPPTPTPQPPQQPRVTVNVKWGAKAAAVEVSDMLAVKDLRAELGGAAA--HLPLPKD 238
Query: 231 G-YFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
G YFFIYKQNVM++DR+ RWH V GDTIEIFNG VTGG+
Sbjct: 239 GGYFFIYKQNVMEEDRTLRWHDVKNGDTIEIFNGRVTGGA 278
>gi|242096750|ref|XP_002438865.1| hypothetical protein SORBIDRAFT_10g027480 [Sorghum bicolor]
gi|241917088|gb|EER90232.1| hypothetical protein SORBIDRAFT_10g027480 [Sorghum bicolor]
Length = 292
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 147/293 (50%), Gaps = 25/293 (8%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNG-----------QV 49
MDV F G+ FT+EV +F TV E+KE + +GIPV Q L G Q
Sbjct: 1 MDVTFATPGGREFTVEVWYFATVREMKEAVHAREGIPVASQRLFLAGREGKAAEEDDQQE 60
Query: 50 LQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHH--- 106
L D RD H I++ SR+ L++ D P + SPS
Sbjct: 61 LDDARDTAHYGIVEGSRVVLVLPDDAPPPSPSPSPSPSPSPANANAAVVRVAVSAPEIIG 120
Query: 107 -HHLPLD-MDVNDTVLRLKEKIHEME--SIPVNRLLVQSSGAELQDHRSLRDCELMDNAE 162
+ LD + +DTV RLKE + + ++P R + AE++D ++L D +
Sbjct: 121 PRGIALDEVPASDTVARLKELLQDRTDGALPAARTALFLDKAEMEDGKTLADYGPPADGG 180
Query: 163 IDVH--VRP-SPTATSTTSSGM---GPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKEL 216
+DV VRP +P A+ G + ++ V + G + +EV A D V +LRKE+
Sbjct: 181 MDVSAVVRPQAPVASGGGGGGNGGGARNQQRIEVSVKFGETAVALEVGAMDVVRDLRKEV 240
Query: 217 QKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
++L + GYFF+YKQNVMDDDR+ RWH V GDTIEIFNG+VTGG+
Sbjct: 241 ERLCLPVR-DVGGGGYFFVYKQNVMDDDRTLRWHEVKNGDTIEIFNGTVTGGA 292
>gi|15236225|ref|NP_192204.1| Ubiquitin family protein [Arabidopsis thaliana]
gi|3924610|gb|AAC79111.1| putative ubiquitin-like protein [Arabidopsis thaliana]
gi|7269780|emb|CAB77780.1| putative protein [Arabidopsis thaliana]
gi|332656854|gb|AEE82254.1| Ubiquitin family protein [Arabidopsis thaliana]
Length = 318
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 143/287 (49%), Gaps = 31/287 (10%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
+ VI E Q G +FTI+V F+DTVL IK KIE QG PV KQ L+F +VLQD ++ C+
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 61 ILQNSRIQLLVASDNK------PQVKTEQSSPSKKIHLKIN------IPSNS-----KTH 103
I NSRI L ++ D+ PQ S+PS IH +N P +S K
Sbjct: 96 IRHNSRILLSISPDDNPTQNQVPQTNQSPSTPSNPIHEFVNNQDSPLSPQSSALTMEKFS 155
Query: 104 HHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLV--QSSGAELQDHRSLRDCELMDNA 161
+ P M V V + + S ++ LL SS + R+ RD E+ +
Sbjct: 156 KNQQDRPPLMRV---VAKRIDNGSSRPSYSLDELLAPRDSSTVAVGSIRN-RDQEVKNRE 211
Query: 162 EIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKR-IPVEVNASDNVSELRKELQKLH 220
PS + + P +++L G R I VEV A DNV ELRKEL K+
Sbjct: 212 S-----SPSDSVEEVINFTDSPAMKMIVMLQPYGYTRMIQVEVTADDNVEELRKELVKMQ 266
Query: 221 QRYHFHLPQDGYFFI--YKQNVMDDDRSFRWHHVGQGDTIEIFNGSV 265
+R +LPQ Y+ I +KQ V+ +D+SF + V GDTI+I G V
Sbjct: 267 ERGELNLPQGMYYLIHKHKQAVLHEDQSFLTNGVAYGDTIQISQGYV 313
>gi|304281943|gb|ADM21181.1| ubiquitin family protein [Arabidopsis thaliana]
Length = 318
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 146/288 (50%), Gaps = 33/288 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
+ VI E Q G +FTI+V F+DTVL IK KIE QG PV KQ L+F +VLQD ++ C+
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 61 ILQNSRIQLLVASDNK------PQVKTEQSSPSKKIHLKIN------IPSNS-----KTH 103
I NSRI L ++ D+ PQ S+PS IH +N P +S K
Sbjct: 96 IRHNSRILLSISPDDNPTQNQVPQTNQSPSTPSNPIHEFVNNQDSPLSPKSSALTMEKFS 155
Query: 104 HHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLV--QSSGAELQDHRSLRDCELMDNA 161
+ P M V V + + S ++ LL SS + R+ RD E+ +
Sbjct: 156 KNQQDRPPLMRV---VAKRIDNGSSRPSYSLDELLAPRDSSTVAVGSIRN-RDQEVKNRE 211
Query: 162 EIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQ-CGNKR-IPVEVNASDNVSELRKELQKL 219
PS + + P +K++V+ Q G R I VEV A DNV ELRKEL K+
Sbjct: 212 S-----SPSDSVEEVINFTDSP-AMKMIVMVQPYGYTRMIQVEVTADDNVEELRKELVKM 265
Query: 220 HQRYHFHLPQDGYFFI--YKQNVMDDDRSFRWHHVGQGDTIEIFNGSV 265
+R +LPQ Y+ I +KQ V+ +D+SF + V GDTI+I G V
Sbjct: 266 QERGELNLPQGMYYLIHKHKQAVLHEDQSFLTNGVAYGDTIQISQGYV 313
>gi|15236292|ref|NP_192246.1| Ubiquitin family protein [Arabidopsis thaliana]
gi|4262164|gb|AAD14464.1| putative ubiquitin-like protein [Arabidopsis thaliana]
gi|7270207|emb|CAB77822.1| putative protein [Arabidopsis thaliana]
gi|67633730|gb|AAY78789.1| ubiquitin family protein [Arabidopsis thaliana]
gi|332656911|gb|AEE82311.1| Ubiquitin family protein [Arabidopsis thaliana]
Length = 295
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 139/283 (49%), Gaps = 20/283 (7%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + E + G F+I++G DTVL K KIE Q IPV +QT+ F G++L+D D+ +
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSK-------THHHHHHLPLDM 113
ILQN + L ++ D+ P SPS IH + +++ H
Sbjct: 61 ILQNPLLHLSISPDDNPTQNQVPQSPSNPIHEFVKNQDSAEDKKNPVLLHQTGKPPLPPK 120
Query: 114 DVNDTVLRLKEKIHEMESIP--VNRLL-VQSSGAELQDHRSLRDCELM-------DNAEI 163
T + H+ I V LL Q + R RD E+ D+ +
Sbjct: 121 SSPLTTENFSKNQHDRPVITKMVPELLGPQGTSPVTVGRRRNRDQEVQNRVSSSSDSVKE 180
Query: 164 DVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRY 223
+++ +P T + P K+ ++V +RI VEVN NV LRKEL K+ +R
Sbjct: 181 VINIPDTPARKKTKNY---PLKITVMVQPFEETRRIQVEVNVLSNVEVLRKELVKMQERG 237
Query: 224 HFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVT 266
+LP +G+FFI+KQ+V+ +D+SF + V GDTIEIF G VT
Sbjct: 238 ELNLPHEGFFFIHKQDVLREDQSFMANRVAPGDTIEIFQGYVT 280
>gi|15236291|ref|NP_192245.1| Ubiquitin family protein [Arabidopsis thaliana]
gi|4262165|gb|AAD14465.1| putative ubiquitin-like protein [Arabidopsis thaliana]
gi|7270206|emb|CAB77821.1| putative protein [Arabidopsis thaliana]
gi|67633728|gb|AAY78788.1| ubiquitin family protein [Arabidopsis thaliana]
gi|332656910|gb|AEE82310.1| Ubiquitin family protein [Arabidopsis thaliana]
Length = 284
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 146/289 (50%), Gaps = 35/289 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
+ VI E Q G +FTI+V F+DTVL IK KIE QG PV KQ L+F +VLQD ++ C+
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 61 ILQNSRIQLLVASDNK------PQVKTEQSSPSKKIHLKIN------IPSNS-----KTH 103
I NSRI L ++ D+ PQ S+PS IH +N P +S K
Sbjct: 62 IRHNSRILLSISPDDNPTQNQVPQTNQSPSTPSNPIHEFVNNQDSPLSPKSSALTMEKFS 121
Query: 104 HHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLV--QSSGAELQDHRSLRDCELMDNA 161
+ P M V V + + S ++ LL SS + R+ RD E+ +
Sbjct: 122 KNQQDRPPLMRV---VAKRIDNGSSRPSYSLDELLAPRDSSTVAVGSIRN-RDQEVKNRV 177
Query: 162 EIDVHVRPSPT-ATSTTSSGMGPRKLKLLVLTQ-CGNKR-IPVEVNASDNVSELRKELQK 218
SP+ + + +K++V+ Q G R I VEV A DNV ELRKEL K
Sbjct: 178 S-------SPSDSVEEVINITDSLAMKMIVMVQPYGYTRMIQVEVTADDNVEELRKELVK 230
Query: 219 LHQRYHFHLPQDGYFFI--YKQNVMDDDRSFRWHHVGQGDTIEIFNGSV 265
+ +R +LPQ Y+ I +KQ V+ +D+SF + V GDTI+I G V
Sbjct: 231 MQERGELNLPQGMYYLIHKHKQAVLHEDQSFLTNGVAYGDTIQISQGYV 279
>gi|357154787|ref|XP_003576901.1| PREDICTED: polyubiquitin-C-like [Brachypodium distachyon]
Length = 226
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 123/270 (45%), Gaps = 45/270 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDV FE +G+ F IE+ F TV +KE + + GIPV Q L FN L+DD D +H
Sbjct: 1 MDVTFETTQGRRFEIEIWFLSTVRRMKEYVREEAGIPVESQRLFFNNSELEDDLDTQHYA 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I S + L+V D+ + ++I+ +MD +D
Sbjct: 61 IAHGSHV-LIVLPDSAAPSPGAAAIDKQQIN----------------QAAAEMDQDDP-- 101
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
P + G E++D +R + V A +
Sbjct: 102 ------------P------EGEGTEVRDRAVIRQPPAANPVAAAAKVVLCGGAGNKQQ-- 141
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDG-YFFIYKQN 239
G + ++ V + G + VEV +D V ELR EL LP+DG YFFIYKQN
Sbjct: 142 -GQQIGRMSVEVKWGGRSATVEVGEADAVKELRAELDG----QLLQLPEDGGYFFIYKQN 196
Query: 240 VMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
VM++DR+ RWH V GDTIEIFNG VTGG+
Sbjct: 197 VMEEDRTLRWHDVRSGDTIEIFNGRVTGGA 226
>gi|225447320|ref|XP_002274095.1| PREDICTED: uncharacterized protein LOC100243083 [Vitis vinifera]
gi|297739303|emb|CBI28954.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 142/263 (53%), Gaps = 27/263 (10%)
Query: 9 RGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEIL-QNSRI 67
R F+I++G + VLEIK KIE+ G+PV QTL +G L D D+E I+ + +RI
Sbjct: 8 RTCEFSIDIGLQEPVLEIKHKIEQLHGVPVALQTLSVSGWELMDGLDMEDYPIVTEGTRI 67
Query: 68 QLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIH 127
L+ ++ + KI + I + + +++D +TV LKEKIH
Sbjct: 68 DLMTK-----HIEHYPLARCSKIQIIIKFSAR--------QISIEVDRTETVGSLKEKIH 114
Query: 128 EMESIPVNRLLVQSSGAELQ-DHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKL 186
+E P+ R+++ SG E++ D R+L + + + +EI V ++ A + T RKL
Sbjct: 115 IIEGTPIKRMILYFSGTEMEEDFRNLSEYGIREFSEIIVFLK----ALNRTRDQPPVRKL 170
Query: 187 KLLVLTQCG---NKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDD 243
++V T + IP+E+ D V ELR+ L L ++ LP+D Y FI+KQ +M D
Sbjct: 171 NVVVQTSSSLLNSACIPLELRDMDTVHELRQLL--LARKI---LPRDDYLFIHKQRIMRD 225
Query: 244 DRSFRWHHVGQGDTIEIFNGSVT 266
+ S RWH V GD++ +F G+V+
Sbjct: 226 NCSLRWHGVEDGDSLYVFRGTVS 248
>gi|356547071|ref|XP_003541941.1| PREDICTED: polyubiquitin-like [Glycine max]
Length = 249
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 138/263 (52%), Gaps = 31/263 (11%)
Query: 9 RGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEIL-QNSRI 67
R F IEVG +TV IK KIE+ GIPVP Q L +G L D D+E I+ + ++I
Sbjct: 8 RTNQFFIEVGTQETVAAIKRKIEQILGIPVPSQILTVSGWELLDGLDMEDYPIVTEGTKI 67
Query: 68 QLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIH 127
L +K + PSK ++I + +++ + +++D DTV LKEKIH
Sbjct: 68 DL--------TIKPVEPHPSK---MQITVKFSARKFN------IEVDRTDTVRSLKEKIH 110
Query: 128 EMESIPVNRLLVQSSGAEL-QDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKL 186
++S P+ R+ + SG EL +D R L + + + +EI V ++P + + RKL
Sbjct: 111 IIDSTPIKRMTLYFSGRELDEDFRILSEYGIREFSEIVVFLKPLNRSREEPPT----RKL 166
Query: 187 KLLVLTQCG---NKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDD 243
L+V T IP+E+ + VS+L+ Q L R LP D Y FI+KQ +M D
Sbjct: 167 SLVVQTSSSLLNGATIPLEMRDASTVSDLK---QLLISRKI--LPVDDYLFIHKQRIMRD 221
Query: 244 DRSFRWHHVGQGDTIEIFNGSVT 266
S RWH V GD + +F G+V+
Sbjct: 222 SCSLRWHGVEDGDCLYVFKGTVS 244
>gi|15234695|ref|NP_192435.1| ubiquitin family protein [Arabidopsis thaliana]
gi|7267286|emb|CAB81068.1| putative protein (ubiquitin like) [Arabidopsis thaliana]
gi|332657096|gb|AEE82496.1| ubiquitin family protein [Arabidopsis thaliana]
Length = 259
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 136/272 (50%), Gaps = 32/272 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDV FE Q G+ F IE+G++DTVLEIK+KIEKYQ IPVP QTL F G L+D D+ C+
Sbjct: 1 MDVYFETQNGRKFCIELGYWDTVLEIKKKIEKYQRIPVPNQTLFF-GNALEDHLDIGQCK 59
Query: 61 ILQNSRIQLLV---ASDNKPQV-KTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVN 116
ILQNS + L V +DN QV +TE+ P + + LPL +V
Sbjct: 60 ILQNSHVVLFVLPDPNDNNDQVLQTEEQPPIIGDLI------------YGEDLPLTTEV- 106
Query: 117 DTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATST 176
VL ++ +S N S A + +D + +N + PS +
Sbjct: 107 --VLNIRPFCPVQDSPVRNNDQSPPSDAAKDIIKGHQDSPVRNNEQ----TPPSDSVKEN 160
Query: 177 TS---SGMGPRKLKLLVLTQCGN----KRIPVEVNASDNVSELRKELQKLHQRYHFHLPQ 229
T+ S +G L L V+ G K + + V LR+EL + R H PQ
Sbjct: 161 TNIQDSPVGKIILTLRVMPYSGKIKAAKNLHFITYKTYRVKMLRQELVQNELRDHLDRPQ 220
Query: 230 DG-YFFIYKQNVMDDDRSFRWHHVGQGDTIEI 260
DG YFF++K V+++D+SF W+ V D +EI
Sbjct: 221 DGDYFFVHKGRVLNEDQSFEWNSVAHTDIVEI 252
>gi|224132636|ref|XP_002327844.1| predicted protein [Populus trichocarpa]
gi|222837253|gb|EEE75632.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 137/262 (52%), Gaps = 27/262 (10%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEI-LQNSRIQ 68
+ F +E+G D VL+IK +I++ G+PV Q L +G L D D+E I + +RI+
Sbjct: 9 AREFLLEIGLQDPVLDIKRRIQQLVGVPVTAQILAVSGWELVDGLDMEDYPIVIDGTRIE 68
Query: 69 LLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHE 128
L + KP + SS I + + + + +++D DTV LKEKIH
Sbjct: 69 LTI----KPMMPAF-SSYCGMIQIIVKFSA--------RQINIEVDRTDTVRSLKEKIHI 115
Query: 129 MESIPVNRLLVQSSGAEL-QDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLK 187
+ P+ R+ + SG EL +D R+L + + + +EI V ++ S RKL
Sbjct: 116 FDGTPIKRMSLFFSGVELDEDFRNLSEYGIHEFSEIVVFLKTMTRIRDDPPS----RKLS 171
Query: 188 LLVLTQ-C--GNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDD 244
++V T C IP+E+ S V+++R+ L L ++ LPQD Y FI+KQ +M D
Sbjct: 172 IVVQTSSCLLNAACIPLEMKDSSTVNDMRQLL--LSRKI---LPQDDYLFIHKQRIMRDS 226
Query: 245 RSFRWHHVGQGDTIEIFNGSVT 266
S RWH V GD++ +F G+V+
Sbjct: 227 CSLRWHGVDNGDSLYVFKGTVS 248
>gi|255577723|ref|XP_002529737.1| protein binding protein, putative [Ricinus communis]
gi|223530778|gb|EEF32644.1| protein binding protein, putative [Ricinus communis]
Length = 255
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 135/262 (51%), Gaps = 24/262 (9%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEIL-QNSRIQ 68
+ F IEVG + VLEIK KIE G+ V QTL G L D D+E I+ + ++I
Sbjct: 9 AREFPIEVGHQEPVLEIKSKIELLLGVSVAAQTLSIFGWELVDGLDMEDYPIVTEGTKID 68
Query: 69 LLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHE 128
L + N + + ++KI + + S + +++D DT+ LKEKIH
Sbjct: 69 LTIEPMNP--LLFNNGNDTRKIQIIVKFSS--------RQINIEVDTTDTIRSLKEKIHI 118
Query: 129 MESIPVNRLLVQSSGAEL-QDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLK 187
++ P+ RL + SG EL +D R+L + + + +EI V ++ S RKL
Sbjct: 119 VDGTPIKRLSLFFSGIELDEDFRNLSEYGIREFSEIIVFLK----TMSRLRDEPCTRKLS 174
Query: 188 LLVLTQCG---NKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDD 244
+ V T IP+E+ S +S+LR+ L L ++ LP D Y FI+KQ +M D+
Sbjct: 175 ITVQTSSSLLNAAAIPLEMKDSSTISDLRRLL--LSRKV---LPLDDYLFIHKQRIMRDN 229
Query: 245 RSFRWHHVGQGDTIEIFNGSVT 266
S RWH V GD++ +F G+V+
Sbjct: 230 CSLRWHGVENGDSLYVFKGTVS 251
>gi|145360542|ref|NP_180794.2| ubiquitin-like domain-containing protein [Arabidopsis thaliana]
gi|330253578|gb|AEC08672.1| ubiquitin-like domain-containing protein [Arabidopsis thaliana]
Length = 242
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 136/258 (52%), Gaps = 38/258 (14%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQ-NSRIQLLVASDNKPQV 79
++VLE+K+++ ++ IP TL + L D D+E I+ +RI L V P
Sbjct: 7 ESVLEVKKRLGQFLQIPTSSITLFVSCWELIDGLDIEDYPIISHGTRIDLTVT----PLF 62
Query: 80 KTEQSSPS------KKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIP 133
++PS +KIH+ + PS T +++D +TV LK+KIH +E+ P
Sbjct: 63 ----TAPSFIHAAVRKIHVTVKFPSKQFT--------VEVDRTETVSSLKDKIHIVENTP 110
Query: 134 VNRLLVQSSGAELQD-HRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGP-RKLKLLVL 191
+ R+ + SG EL D +R+L + + + +EI V ++ A + P RKL LV
Sbjct: 111 IKRMQLYYSGIELADDYRNLNEYGITEFSEIVVFLKSINRA-----KDVAPVRKLCFLVQ 165
Query: 192 TQCG---NKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFR 248
T RIPVE+ + +SE+R+ LQ + LP+D Y F++KQ +M ++ S R
Sbjct: 166 TSSSLFNGARIPVEIKDTCTISEMREGLQA-----NKTLPRDEYIFVHKQRIMRENCSLR 220
Query: 249 WHHVGQGDTIEIFNGSVT 266
WH V GDT+ +F GS++
Sbjct: 221 WHGVENGDTLFVFKGSIS 238
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDD-RDVEHCEILQNSRIQ 68
K FT+EV +TV +K+KI + P+ + L ++G L DD R++ I + S I
Sbjct: 83 SKQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLYYSGIELADDYRNLNEYGITEFSEIV 142
Query: 69 LLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHE 128
+ + S N+ + +P +K+ + S + + +P+++ T+ ++E +
Sbjct: 143 VFLKSINRAK----DVAPVRKLCFLVQ---TSSSLFNGARIPVEIKDTCTISEMREGLQA 195
Query: 129 MESIPVNRLLVQSSGAELQDHRSLR 153
+++P + + ++++ SLR
Sbjct: 196 NKTLPRDEYIFVHKQRIMRENCSLR 220
>gi|297789844|ref|XP_002862849.1| hypothetical protein ARALYDRAFT_359335 [Arabidopsis lyrata subsp.
lyrata]
gi|297308597|gb|EFH39107.1| hypothetical protein ARALYDRAFT_359335 [Arabidopsis lyrata subsp.
lyrata]
Length = 242
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 136/258 (52%), Gaps = 38/258 (14%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQ-NSRIQLLVASDNKPQV 79
++VLE+K+++ ++ IP TL + L D D+E I+ +RI L V P
Sbjct: 7 ESVLEVKKRLGQFLQIPASSLTLFVSCWELIDGLDIEDYPIISHGTRIDLTVT----PLF 62
Query: 80 KTEQSSPS------KKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIP 133
++PS +KIH+ + PS T +++D +TV LK+KIH +E+ P
Sbjct: 63 ----TAPSFINPAIRKIHVTVKFPSKQFT--------VEVDRTETVSSLKDKIHIVENTP 110
Query: 134 VNRLLVQSSGAELQD-HRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGP-RKLKLLVL 191
+ R+ + SG EL D +R+L + + + +EI V ++ + + + P RKL LV
Sbjct: 111 IKRMQLYYSGIELADDYRNLNEYGISEFSEIVVFLK-----SINRAKDVAPVRKLCFLVQ 165
Query: 192 TQCG---NKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFR 248
T RIPVE+ + +SE+R+ LQ + LP+D Y F++KQ +M ++ S R
Sbjct: 166 TSSSLFNGARIPVEIKDTCTISEMREGLQA-----NKTLPRDEYIFVHKQRIMRENCSLR 220
Query: 249 WHHVGQGDTIEIFNGSVT 266
WH V DT+ +F GS++
Sbjct: 221 WHGVENCDTLFVFKGSIS 238
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDD-RDVEHCEILQNSRIQ 68
K FT+EV +TV +K+KI + P+ + L ++G L DD R++ I + S I
Sbjct: 83 SKQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLYYSGIELADDYRNLNEYGISEFSEIV 142
Query: 69 LLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHE 128
+ + S N+ + +P +K+ + S + + +P+++ T+ ++E +
Sbjct: 143 VFLKSINRAK----DVAPVRKLCFLVQ---TSSSLFNGARIPVEIKDTCTISEMREGLQA 195
Query: 129 MESIPVNRLLVQSSGAELQDHRSLR 153
+++P + + ++++ SLR
Sbjct: 196 NKTLPRDEYIFVHKQRIMRENCSLR 220
>gi|356542098|ref|XP_003539508.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
Length = 268
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 130/265 (49%), Gaps = 43/265 (16%)
Query: 13 FTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEIL-QNSRIQLLV 71
F IEVG +TV IK KIEK GIPVP Q L +G L D +E I+ + +++ L +
Sbjct: 31 FFIEVGTQETVAAIKRKIEKIHGIPVPSQILTVSGWELLDGLGMEDYPIVTEGTKVDLTI 90
Query: 72 AS----DNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIH 127
NK Q+ TE+ S K +++D DTV LKEKIH
Sbjct: 91 KPVEPHPNKMQI-TEKFSARK--------------------FDIEVDRTDTVRSLKEKIH 129
Query: 128 EMESIPVNRLLVQSSGAEL-QDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKL 186
++S + R+ + SG EL +D R L + + +EI V +P + + RKL
Sbjct: 130 IIDSTLIKRMTLYFSGRELDEDFRILSEYGIRGFSEIAVFXKPLNRSREEPPT----RKL 185
Query: 187 KLLVLTQCG---NKRIPVEVNASDNVSELRKEL--QKLHQRYHFHLPQDGYFFIYKQNVM 241
L+V T IP+E+ + V +L++ L +K+ LP D Y FI+KQ +M
Sbjct: 186 SLVVQTSSSLLNAATIPLEMRDASTVGDLKQLLISRKI-------LPVDDYLFIHKQRIM 238
Query: 242 DDDRSFRWHHVGQGDTIEIFNGSVT 266
D S RWH + GD + +F G+V+
Sbjct: 239 RDSCSLRWHGIENGDCLYVFKGTVS 263
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 4 IFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDD-RDVEHCEIL 62
I E + F IEV DTV +KEKI + + TL F+G+ L +D R + I
Sbjct: 102 ITEKFSARKFDIEVDRTDTVRSLKEKIHIIDSTLIKRMTLYFSGRELDEDFRILSEYGIR 161
Query: 63 QNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRL 122
S I + KP ++ + P++K+ L + S + + +PL+M TV L
Sbjct: 162 GFSEIAVF----XKPLNRSREEPPTRKLSLVVQ---TSSSLLNAATIPLEMRDASTVGDL 214
Query: 123 KEKIHEMESIPVNRLLVQSSGAELQDHRSLR 153
K+ + + +PV+ L ++D SLR
Sbjct: 215 KQLLISRKILPVDDYLFIHKQRIMRDSCSLR 245
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 99 NSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELM 158
+++ H + +++ +TV +K KI ++ IPV ++ SG EL D + D ++
Sbjct: 21 STRKFHDENQFFIEVGTQETVAAIKRKIEKIHGIPVPSQILTVSGWELLDGLGMEDYPIV 80
Query: 159 -DNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKEL 216
+ ++D+ ++P + P K+ + + ++ +EV+ +D V L++++
Sbjct: 81 TEGTKVDLTIKP-----------VEPHPNKMQITEKFSARKFDIEVDRTDTVRSLKEKI 128
>gi|3831461|gb|AAC69943.1| hypothetical protein [Arabidopsis thaliana]
Length = 233
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 133/256 (51%), Gaps = 43/256 (16%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQ-NSRIQLLVASDNKPQV 79
++VLE+K+++ ++ IP TL + L D D+E I+ +RI L V P
Sbjct: 7 ESVLEVKKRLGQFLQIPTSSITLFVSCWELIDGLDIEDYPIISHGTRIDLTVT----PLF 62
Query: 80 KTEQSSPS------KKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIP 133
++PS +KIH+ + PS T +++D +TV LK+KIH +E+ P
Sbjct: 63 ----TAPSFIHAAVRKIHVTVKFPSKQFT--------VEVDRTETVSSLKDKIHIVENTP 110
Query: 134 VNRLLVQSSGAELQD-HRSLRDCELMDNAEIDVHVRPSPTA--TSTTSSGMGPRKLKLLV 190
+ R+ + SG EL D +R+L + + + +EI V ++ A + TSS +
Sbjct: 111 IKRMQLYYSGIELADDYRNLNEYGITEFSEIVVFLKSINRAKDVAPTSSSL--------- 161
Query: 191 LTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWH 250
RIPVE+ + +SE+R+ LQ + LP+D Y F++KQ +M ++ S RWH
Sbjct: 162 ---FNGARIPVEIKDTCTISEMREGLQA-----NKTLPRDEYIFVHKQRIMRENCSLRWH 213
Query: 251 HVGQGDTIEIFNGSVT 266
V GDT+ +F GS++
Sbjct: 214 GVENGDTLFVFKGSIS 229
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDD-RDVEHCEILQNSRIQ 68
K FT+EV +TV +K+KI + P+ + L ++G L DD R++ I + S I
Sbjct: 83 SKQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLYYSGIELADDYRNLNEYGITEFSEIV 142
Query: 69 LLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHE 128
+ + S N+ + ++ S + + +P+++ T+ ++E +
Sbjct: 143 VFLKSINRAK----------------DVAPTSSSLFNGARIPVEIKDTCTISEMREGLQA 186
Query: 129 MESIPVNRLLVQSSGAELQDHRSLR 153
+++P + + ++++ SLR
Sbjct: 187 NKTLPRDEYIFVHKQRIMRENCSLR 211
>gi|15236289|ref|NP_192244.1| ubiquitin family protein [Arabidopsis thaliana]
gi|4262163|gb|AAD14463.1| putative ubiquitin-like protein [Arabidopsis thaliana]
gi|7270205|emb|CAB77820.1| putative protein [Arabidopsis thaliana]
gi|332656909|gb|AEE82309.1| ubiquitin family protein [Arabidopsis thaliana]
Length = 263
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 128/277 (46%), Gaps = 33/277 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M+V + + G +F+I + F +TVL+IKEKIEK QGIPV KQ L +G+ L+DD
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLK------INIPSNSK---------THHH 105
IL S + L ++ D P EQ+ SK+I K I S SK H+
Sbjct: 61 ILFESLL-LRISPDADPNQSNEQTEQSKQIDDKKQEFCGIQDSSESKKLTRVMARRVHNV 119
Query: 106 HHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDV 165
+ LP L E + P V G Q ++ A+ +
Sbjct: 120 YSSLP--------AYSLDELLG-----PKYSATVTVGGRTNQVVQTTEQASTSGTAKEVL 166
Query: 166 HVRPSPTATSTTSSGMGPRKLKLLVL-TQCGNKRIPVEVNASDNVSELRKELQKLHQRYH 224
SP ++ P K + V Q K I VEVNA DNV ELRKEL K+ +R
Sbjct: 167 RDSDSPVEKKIKTN---PMKFTVHVKPYQEDTKMIQVEVNADDNVEELRKELVKMQERGE 223
Query: 225 FHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIF 261
+LP + + + + + + +SF+W+ V GDTIE+
Sbjct: 224 LNLPHEAFHLVSSELPLIETKSFKWNRVADGDTIELI 260
>gi|304281942|gb|ADM21180.1| ubiquitin family protein [Arabidopsis thaliana]
Length = 262
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 130/277 (46%), Gaps = 34/277 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M+V + + G +F+I + F +TVL+IKEKIEK QGIPV KQ L +G+ L+D +++
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDLHKIDYM- 59
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLK------INIPSNSK---------THHH 105
IL S + L ++ D P EQ+ SK+I K I S SK H+
Sbjct: 60 ILFESHL-LRISPDADPNQSNEQTEQSKQIDDKKQEFCGIQDSSESKKLTRVMARRVHNV 118
Query: 106 HHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDV 165
+ LP L E + P V G Q ++ A+ +
Sbjct: 119 YSSLP--------AYSLDELLG-----PKYSATVAVGGRTNQVVQTTEQASTSGTAKEVL 165
Query: 166 HVRPSPTATSTTSSGMGPRKLKLLVL-TQCGNKRIPVEVNASDNVSELRKELQKLHQRYH 224
SP ++ P K + V Q K I VEVNA DNV ELRKEL K+ +R
Sbjct: 166 RDSDSPVEKKIKTN---PMKFTVHVKPYQEDTKMIQVEVNADDNVEELRKELVKMQERGE 222
Query: 225 FHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIF 261
+LP + + + + + + +SF+W+ V GDTIE+
Sbjct: 223 LNLPHEAFHLVSSELPLIETKSFKWNRVADGDTIELI 259
>gi|357453489|ref|XP_003597022.1| hypothetical protein MTR_2g088760 [Medicago truncatula]
gi|355486070|gb|AES67273.1| hypothetical protein MTR_2g088760 [Medicago truncatula]
Length = 252
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 136/259 (52%), Gaps = 28/259 (10%)
Query: 13 FTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEIL-QNSRIQLLV 71
F IEVG +TVLEIK KIE+ IPV Q L G L D D+E I+ + ++I L +
Sbjct: 12 FFIEVGTLETVLEIKRKIEQIHAIPVAYQILTVCGFELLDGLDMEDYPIVSEGTKIDLTI 71
Query: 72 ASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMES 131
KP P+K ++I + +++ + +++D DTV LKEKIH +++
Sbjct: 72 ----KPMEPHIIHHPNK---MQITVKFSARL------INIEVDKTDTVHSLKEKIHIIDN 118
Query: 132 IPVNRLLVQSSGAEL-QDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLV 190
P+ + + G EL +D R+L + + + +EI V ++ T+ + RKL ++
Sbjct: 119 TPIKSMKLFFLGRELNEDFRNLNEYGIREFSEIIVFLK-----TTNRTKEPPTRKLSFVL 173
Query: 191 LTQCG---NKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSF 247
T IP+E+ + V++L++ L L ++ LP D Y FI++Q +M D S
Sbjct: 174 QTSSSLLNAATIPLEMKDTSTVNDLKQLL--LSRKI---LPVDDYLFIHRQRIMRDSCSL 228
Query: 248 RWHHVGQGDTIEIFNGSVT 266
RWH V GD + +F G+V+
Sbjct: 229 RWHGVENGDQLYVFKGTVS 247
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDD-RDVEHCEILQNSRIQ 68
+ IEV DTV +KEKI P+ L F G+ L +D R++ I + S I
Sbjct: 93 ARLINIEVDKTDTVHSLKEKIHIIDNTPIKSMKLFFLGRELNEDFRNLNEYGIREFSEII 152
Query: 69 LLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHE 128
+ + + N+ + P++K+ + S + + +PL+M TV LK+ +
Sbjct: 153 VFLKTTNRT-----KEPPTRKLSF---VLQTSSSLLNAATIPLEMKDTSTVNDLKQLLLS 204
Query: 129 MESIPVNRLLVQSSGAELQDHRSLR 153
+ +PV+ L ++D SLR
Sbjct: 205 RKILPVDDYLFIHRQRIMRDSCSLR 229
>gi|449453682|ref|XP_004144585.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
Length = 251
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 137/275 (49%), Gaps = 39/275 (14%)
Query: 4 IFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE--I 61
IF G F I++ + ++EIK KIE++ GIP+ QTL G L D +E + I
Sbjct: 3 IFIVTMGHEFPIDIENQEQIIEIKRKIEQFIGIPIESQTLSVYGCELLDGLVMEDYDQFI 62
Query: 62 LQNSRIQL----LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVND 117
+ SRI L ++A N+ + E S +INI ++D +
Sbjct: 63 TEGSRIDLSVDQIIAPSNEFPIAVEFSGQ------RINI---------------NIDKTE 101
Query: 118 TVLRLKEKIHEMESIPVNRLLVQSSGAEL-QDHRSLRDCELMDNAEIDVHVRPSPTATST 176
TV LK+KI + S+P+ + + SG EL +D ++L + + + +E+ V ++ S
Sbjct: 102 TVHSLKQKIQIIYSLPIQTMSLFHSGMELVEDCQNLSEFGIGEFSEVIVFMKTMSRYLSE 161
Query: 177 TSSGMGPRKLKLLV---LTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYF 233
SS RK+ +V + IP+E+ S V+++R+ L L + LP D Y
Sbjct: 162 DSS---RRKVSFVVEMSSSLLNAACIPMEMKDSSTVNDVRELL--LSGKI---LPDDEYL 213
Query: 234 FIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGG 268
FI+KQ +M D RS RWH V GD + +F G+V+ G
Sbjct: 214 FIHKQRIMRDKRSLRWHGVENGDFLYVFKGTVSRG 248
>gi|15234692|ref|NP_192434.1| ubiquitin family protein [Arabidopsis thaliana]
gi|7267285|emb|CAB81067.1| putative protein (ubiquitin like) [Arabidopsis thaliana]
gi|332657095|gb|AEE82495.1| ubiquitin family protein [Arabidopsis thaliana]
Length = 318
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MDV FE Q G F IE+G++DT+LEIKEKIEKYQ IPV KQTL+F G VLQD D++ C
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQDHLDIKQCV 60
Query: 61 ILQNSRIQLLV 71
IL +S IQ+ V
Sbjct: 61 ILNHSHIQIFV 71
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 117 DTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
DT+L +KEKI + + IPV++ + G LQDH ++ C +++++ I + V
Sbjct: 21 DTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQDHLDIKQCVILNHSHIQIFVE 72
>gi|297809723|ref|XP_002872745.1| hypothetical protein ARALYDRAFT_490172 [Arabidopsis lyrata subsp.
lyrata]
gi|297318582|gb|EFH49004.1| hypothetical protein ARALYDRAFT_490172 [Arabidopsis lyrata subsp.
lyrata]
Length = 390
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 25/271 (9%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQ-VLQDDRDVEHC 59
M + E G F IE+ DT+L +K+KIEK Q IPV KQTL+ +G +L++D +++ C
Sbjct: 1 MKFLVEILSGSLFEIELDRKDTLLVVKQKIEKSQRIPVSKQTLIVDGIFILREDLNLDQC 60
Query: 60 EILQNSRIQLLVASD-------NKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLD 112
+I+ +S+IQL V+ D N +TEQS P+ I ++ + PL
Sbjct: 61 QIVHDSQIQLEVSPDVNHNHNGNDQMPETEQS-PAPWISVE--------EYFERKGWPLT 111
Query: 113 MDVNDTVLRLK-EKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSP 171
+ + + E + +++ P + + ++ +QD S++ +N +
Sbjct: 112 AEEIRKIYSYRPETMLDIKQSPPSNSVKET--INIQDS-SVKFANKNNNDIVPPQSNSVK 168
Query: 172 TATSTTSSGMGPRKLKLLVLTQCGNKRIP----VEVNASDNVSELRKELQKLHQRYHFHL 227
T + G RK+ + V G +P + V ++D V LR E+ +R L
Sbjct: 169 NITKSNKRGRKKRKMVVGVSPYSGMNEVPKNILLTVISTDEVKTLRDEMVHRERRGDIEL 228
Query: 228 PQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
PQ+GYFF + V+++D+S+ W+ V DTI
Sbjct: 229 PQEGYFFTHNNQVLNEDQSYEWNGVKPVDTI 259
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 155 CELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQC-GNKR-IPVEVNASDNVSEL 212
C++ D++ + V V P +S + + ++C G KR I VEV+++D V L
Sbjct: 271 CKIQDSS-VTVQV---PQTEQPPASNSKKKVYVMPFSSECKGLKRFIEVEVSSTDQVKIL 326
Query: 213 RKELQKLHQRYHFHLPQDGYFFI--YKQNVMDDDRSFRWHHV-GQGDTI 258
R EL + +R + LP +GYFF K+ ++++D+SF W+ V G +T+
Sbjct: 327 RNELVESIRRGYIKLPHEGYFFADRMKERILNEDQSFEWNGVLGPAETV 375
>gi|86439763|emb|CAJ19359.1| polyubiquitin-like protein [Triticum aestivum]
Length = 200
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 110 PLDMDVN--DTVLRLKEKIHEMESIPVNRLLV----------QSSGAELQDHRSLRDCEL 157
P M+V DTVL +K K+ P L + ++GA + + + + +
Sbjct: 14 PFKMEVGFFDTVLDIKHKLQGRNGWPAAALSLFHDGGALVDDDAAGAGVTERYGVVEGSV 73
Query: 158 ----MDNAEIDVHVRP----SPTATSTTSSGM---GPRKLKLLVLTQCGNKRIPVEVNAS 206
+D A RP T GM P L++ V+++CG R+ V V A
Sbjct: 74 IHVALDGAGDGDDRRPRQKGKKNGTRRPGKGMRAPAPEPLRVTVVSRCGAGRVEVAVRAR 133
Query: 207 DNVSELRKELQK-LHQRYHFHLPQDG-YFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGS 264
VS LR+EL+ F LP DG YFFI+ Q+VMD+ RSF WH V GD + +F GS
Sbjct: 134 GAVSALRRELEGGASSGSGFPLPADGGYFFIHGQSVMDEARSFEWHGVAAGDEVVVFEGS 193
Query: 265 VT 266
VT
Sbjct: 194 VT 195
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 1 MDVIFE-PQRGKA-FTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDV-- 56
MDV F G+A F +EVGFFDTVL+IK K++ G P +L +G L DD
Sbjct: 1 MDVTFVCSSSGEAPFKMEVGFFDTVLDIKHKLQGRNGWPAAALSLFHDGGALVDDDAAGA 60
Query: 57 ---EHCEILQNSRIQLLV-----ASDNKPQVKTEQSS---PSKKIHLKINIP 97
E +++ S I + + D +P+ K +++ P K + P
Sbjct: 61 GVTERYGVVEGSVIHVALDGAGDGDDRRPRQKGKKNGTRRPGKGMRAPAPEP 112
>gi|15236228|ref|NP_192206.1| 7SL RNA1 [Arabidopsis thaliana]
gi|3924608|gb|AAC79109.1| putative ubiquitin-like protein [Arabidopsis thaliana]
gi|7269782|emb|CAB77782.1| putative protein [Arabidopsis thaliana]
gi|332656855|gb|AEE82255.1| 7SL RNA1 [Arabidopsis thaliana]
Length = 270
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 118/262 (45%), Gaps = 54/262 (20%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M+V + + G +F+I + F +TVLEIKEKIEK QGIPV KQ L +G+ L+DD
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLK------INIPSNSK---------THHH 105
IL SR+ L ++ D P EQ+ SK+I K I S SK H+
Sbjct: 61 ILFESRLLLRISPDADPNQSNEQTEQSKQIDDKKQEFCGIQDSSESKKITRVMARRVHNI 120
Query: 106 HHHLP-------LDMDVNDTVL---RLKEKIHEMESIPVNRLLVQSSGAE-LQDHRSLRD 154
+ LP L + TV R + + P + + E L+D S +
Sbjct: 121 YSSLPAYSLDELLGPKYSATVAVGGRTNQVVQ-----PTEQASTSGTAKEVLRDSDSPVE 175
Query: 155 CELMDN-AEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
++ N + VHV+P Q + I VEVNA DNV ELR
Sbjct: 176 KKIKTNPMKFTVHVKP----------------------YQEDTRMIHVEVNADDNVEELR 213
Query: 214 KELQKLHQRYHFHLPQDGYFFI 235
KEL K+ +R +LP + + +
Sbjct: 214 KELVKMQERGELNLPHEAFHLL 235
>gi|414589790|tpg|DAA40361.1| TPA: hypothetical protein ZEAMMB73_124498 [Zea mays]
Length = 185
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 11/167 (6%)
Query: 111 LDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQD-------HRSLRDCELMDNAEI 163
+++ DTV +KEK+ P + +GA L+D + + ++ A +
Sbjct: 15 MEVGYFDTVQDVKEKLQSCRGWPAAATTLLHNGAVLEDVDGGGIERHGIVEGSVIHVALL 74
Query: 164 DV-HVRPSPTATSTTSSGMGPRK-LKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLH- 220
D H++ + G GP L+++V++ C R+ + V A VS LR EL++
Sbjct: 75 DGQHLQQPHDKRTEKRRGEGPVPPLRVIVVSGCAEGRVEMAVGARAAVSVLRAELERARG 134
Query: 221 QRYHFHLPQDG-YFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVT 266
F LP+DG YFFI++Q+VMD+ RSF WH V GD I +FNGSV
Sbjct: 135 AGARFPLPRDGAYFFIHEQSVMDESRSFEWHGVAAGDEIVVFNGSVV 181
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQ--DDRDVEH 58
MDV F +AF +EVG+FDTV ++KEK++ +G P TL+ NG VL+ D +E
Sbjct: 1 MDVTFVCSGEEAFKMEVGYFDTVQDVKEKLQSCRGWPAAATTLLHNGAVLEDVDGGGIER 60
Query: 59 CEILQNSRIQL 69
I++ S I +
Sbjct: 61 HGIVEGSVIHV 71
>gi|115488154|ref|NP_001066564.1| Os12g0276300 [Oryza sativa Japonica Group]
gi|113649071|dbj|BAF29583.1| Os12g0276300, partial [Oryza sativa Japonica Group]
Length = 133
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDG-YFFIYKQNVMDDDRSFR 248
V + G K VEV+ V +LR EL H LP+DG YFFIYKQNVM++DR+ R
Sbjct: 55 VNVKWGAKAAAVEVSDMLAVKDLRAELGGAAA--HLPLPKDGGYFFIYKQNVMEEDRTLR 112
Query: 249 WHHVGQGDTIEIFNGSVTGGS 269
WH V GDTIEIFNG VTGG+
Sbjct: 113 WHDVKNGDTIEIFNGRVTGGA 133
>gi|242045114|ref|XP_002460428.1| hypothetical protein SORBIDRAFT_02g027940 [Sorghum bicolor]
gi|241923805|gb|EER96949.1| hypothetical protein SORBIDRAFT_02g027940 [Sorghum bicolor]
Length = 212
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 183 PRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQ-RYHFHLPQDG-YFFIYKQNV 240
P L++ V+++CG R+ V V A VS LR EL++ F LP+DG YFFI+ Q+V
Sbjct: 123 PLPLRVTVVSRCGEGRMEVAVGARAAVSVLRAELERARGVGAPFPLPRDGAYFFIHGQSV 182
Query: 241 MDDDRSFRWHHVGQGDTIEIFNGSVT 266
MD+ RSF WH V GD + +F+GSVT
Sbjct: 183 MDESRSFEWHGVATGDEVVVFDGSVT 208
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVL 50
MDV F +AF +EVG+FDTV ++KEK++ +G P +L+ NG VL
Sbjct: 23 MDVTFVCSGEEAFKMEVGYFDTVQDVKEKLQSRRGWPAAATSLIHNGAVL 72
>gi|15234665|ref|NP_192433.1| ubiquitin family protein [Arabidopsis thaliana]
gi|7267284|emb|CAB81066.1| putative protein [Arabidopsis thaliana]
gi|332657094|gb|AEE82494.1| ubiquitin family protein [Arabidopsis thaliana]
Length = 197
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Query: 13 FTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVA 72
F IE+G++DTVLEIK+KIEKYQ I V +QTL F G VLQD D+E C IL +S +++ V
Sbjct: 70 FEIELGYWDTVLEIKQKIEKYQRILVYRQTLFFQGNVLQDHLDIEQCVILNHSLLKVFVD 129
Query: 73 S------DNKPQVKTEQSSP 86
DN ++TE+S P
Sbjct: 130 PYRNPNHDNDQMLQTEESPP 149
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 106 HHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDV 165
++ +++ DTVL +K+KI + + I V R + G LQDH + C +++++ + V
Sbjct: 67 NYKFEIELGYWDTVLEIKQKIEKYQRILVYRQTLFFQGNVLQDHLDIEQCVILNHSLLKV 126
Query: 166 HVRP 169
V P
Sbjct: 127 FVDP 130
>gi|77554284|gb|ABA97080.1| Ubiquitin family protein, expressed [Oryza sativa Japonica Group]
Length = 302
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M+V E G+ FT+E+ FF TV IKE + + +GIPV Q L F G L DD D E
Sbjct: 1 MEVTLETVAGRRFTVEIWFFSTVRRIKEYVLRQEGIPVESQRLFFAGAELDDDGDTERYS 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSK---KIHLKINIPSNSKTHHHHHHLPLDMDVND 117
ILQ S + LL+ D + K +++ + + + + +++D
Sbjct: 61 ILQGSTVLLLLPEDGAAPPSSGGGGGGGGGTKAMVRVVVNAPAALAGKGGAVTVEVDAAA 120
Query: 118 -TVLRLKEKIHEME--SIPVNRLLVQSSGAELQDHRSL 152
TV LKE++ E ++P R+ + E++D R++
Sbjct: 121 CTVAGLKERVQEGTDGALPAARVALMFGKVEMEDGRAV 158
>gi|15234730|ref|NP_192440.1| ubiquitin family protein [Arabidopsis thaliana]
gi|7267291|emb|CAB81073.1| putative protein [Arabidopsis thaliana]
gi|332657099|gb|AEE82499.1| ubiquitin family protein [Arabidopsis thaliana]
Length = 415
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 36/280 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQ-VLQDDRDVEHC 59
M + E G +F IEV DT+L +K+KIEK Q +PV KQTL+ +G +L++D +++ C
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDGIFILREDLNLDQC 60
Query: 60 EILQNSRIQLLVASDNKP------QV-KTEQSSPSKKIHLKINIP------SNSKTHHHH 106
+I +S+IQL V+ D P Q+ +TEQS P+ I ++ + + +
Sbjct: 61 QIFHDSQIQLEVSPDVNPIHNNDDQIPQTEQSPPAPWISVEEYFAEQDWPLTEEEIRKIY 120
Query: 107 HHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEI--D 164
+ P + + ++++ ES P N + +QD S++ +N ++
Sbjct: 121 SYRP---ETTQDISKIQDAHQTEESPPSNSV---KETVNIQDS-SVKFASKNNNDQVPPT 173
Query: 165 VHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIP----VEVNASDNVSELRKELQKLH 220
S T+ R++ + V G +P V+V +D V LR ++
Sbjct: 174 KQFPQSNLVKKITNGKKRVRQMLVYVSPYPGMNEVPTNILVQVKVTDEVKTLRGLMK--- 230
Query: 221 QRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEI 260
L Q+GY F + V+++D+S+ + V DTI I
Sbjct: 231 ------LAQEGYIFTHNNQVLNEDQSYECNSVKPLDTIVI 264
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 10/125 (8%)
Query: 149 HRSLRDCELMDNAEIDVHV---RPSPTATSTTSSGMGPRKLKLLVL---TQC-GNKR-IP 200
R +++ + ++ + V V SP + S +K+K+ V+ ++C G KR I
Sbjct: 267 RRVIQETSKIQDSSVTVQVPQMEQSPASNSVKEITDPKKKIKVYVVAASSECKGLKRFIE 326
Query: 201 VEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFI--YKQNVMDDDRSFRWHHVGQGDTI 258
V+VN++D V LR EL + +R H +P +GYFF+ K+ V+++D+SF W+ V +T+
Sbjct: 327 VDVNSTDQVKILRTELVESGRRGHIRMPHEGYFFVDRKKERVLNEDQSFEWNRVLPAETV 386
Query: 259 EIFNG 263
+ +G
Sbjct: 387 YMVSG 391
>gi|27734407|gb|AAM51225.1| polyubiquitin [Bigelowiella natans]
Length = 320
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 133/278 (47%), Gaps = 48/278 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 3 MQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 62
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ S +I +K KT + LD+D +DT+
Sbjct: 63 IQKESTLHLVL----------RLRGGSMQIFVK---TLTGKT------ITLDVDSSDTIN 103
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 104 TVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR------------ 151
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
+ +++ V T G K I ++V++SD ++ +++++Q +P D I+
Sbjct: 152 LRGGSMQIFVKTLTG-KTITLDVDSSDTINTVKQKIQDKE-----GIPPDQQRLIFAGKQ 205
Query: 241 MDDDRSFRWHHVGQ-----------GDTIEIFNGSVTG 267
++D R+ +++ + G +++IF ++TG
Sbjct: 206 LEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTG 243
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 19/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 157 MQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 216
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ S +I +K KT + LD+D +DT+
Sbjct: 217 IQKESTLHLVL----------RLRGGSMQIFVK---TLTGKT------ITLDVDSSDTIN 257
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 258 TVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 305
>gi|27734398|gb|AAM51223.1| polyubiquitin [Bigelowiella natans]
gi|27734402|gb|AAM51224.1| polyubiquitin [Bigelowiella natans]
Length = 306
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 133/278 (47%), Gaps = 48/278 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 3 MQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 62
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ S +I +K KT + LD+D +DT+
Sbjct: 63 IQKESTLHLVL----------RLRGGSMQIFVK---TLTGKT------ITLDVDSSDTIN 103
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 104 TVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR------------ 151
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
+ +++ V T G K I ++V++SD ++ +++++Q +P D I+
Sbjct: 152 LRGGSMQIFVKTLTG-KTITLDVDSSDTINTVKQKIQDKE-----GIPPDQQRLIFAGKQ 205
Query: 241 MDDDRSFRWHHVGQ-----------GDTIEIFNGSVTG 267
++D R+ +++ + G +++IF ++TG
Sbjct: 206 LEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTG 243
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 19/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 157 MQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 216
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ S +I +K KT + LD+D +DT+
Sbjct: 217 IQKESTLHLVL----------RLRGGSMQIFVK---TLTGKT------ITLDVDSSDTIN 257
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 258 TVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 305
>gi|290974051|ref|XP_002669760.1| polyubiquitin [Naegleria gruberi]
gi|284083311|gb|EFC37016.1| polyubiquitin [Naegleria gruberi]
Length = 274
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 128/287 (44%), Gaps = 52/287 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLV----------ASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHH--- 107
I + S + L + ++D VK PS+ + +++ SN K H
Sbjct: 61 IQKESTLHLTLTGKTITLEVESNDTIENVK----YPSRSTKIDLSLVSNWKMESTLHLVL 116
Query: 108 ----------------HLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRS 151
+ L+++ NDT+ +K KI + E IP ++ + +G +L+D R+
Sbjct: 117 RLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 176
Query: 152 LRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSE 211
L D + + + + +R GM ++ V T G K I +EV ++D +
Sbjct: 177 LSDYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESNDTIEN 222
Query: 212 LRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
++ ++Q +P D I+ ++D R+ +++ + T+
Sbjct: 223 VKSKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 264
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 122 MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 181
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ NDT+
Sbjct: 182 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESNDTIE 221
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 222 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 269
>gi|578546|emb|CAA84814.1| ubiquitin [Tetrahymena pyriformis]
Length = 379
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T+EV D + IK KI+ +GIP +Q L+F G+ L+D R++
Sbjct: 153 MQVFVKTLTGKTITLEVNSSDNIESIKSKIQDKEGIPSDQQRLIFAGKQLEDGRNISDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + + LD+D +D +
Sbjct: 213 IQKESTLHLVLRLRGGMQVFVKTLTG--------------------KTITLDVDSSDNIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R++ D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K + +++N++DN+ ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTLTLDINSTDNIENVKAKIQDKE-----GIPTDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTVSDYNISKESTL 371
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D + IK+KI+ +GIP +Q L+F G+ L++ R V
Sbjct: 1 MQIFVKTLTGKTVTLDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRTVSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + + LD+ D +
Sbjct: 61 IQKESTVHLVLRLRGGMQVFVKTLTG--------------------KTITLDVAQTDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R++ D + + + + +R G
Sbjct: 101 NIKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EVN+SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QVFVKTLTG-KTITLEVNSSDNIESIKSKIQDKE-----GIPSDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRNISDYNIQKESTL 219
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T++V D + IK KI+ +GIP +Q L+F G+ L+D R V
Sbjct: 77 MQVFVKTLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV ++ K I L++N +D +
Sbjct: 137 IQKESTLHLVLRLRGGMQVFV-KTLTGKTITLEVN-------------------SSDNIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R++ D + + + + +R G
Sbjct: 177 SIKSKIQDKEGIPSDQQRLIFAGKQLEDGRNISDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V++SDN+ ++ ++Q +P D I+
Sbjct: 229 M-----QVFVKTLTG-KTITLDVDSSDNIENVKAKIQDKE-----GIPSDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+++ D + +K KI+ +GIP +Q L+F G+ L+D R V
Sbjct: 305 MQIFVKTLTGKTLTLDINSTDNIENVKAKIQDKEGIPTDQQRLIFAGKQLEDGRTVSDYN 364
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 365 ISKESTLHLVL 375
>gi|242021992|ref|XP_002431426.1| ubiquitin, putative [Pediculus humanus corporis]
gi|212516707|gb|EEB18688.1| ubiquitin, putative [Pediculus humanus corporis]
Length = 844
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 48/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR------------ 452
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
+ K+++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 453 LRGGKMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 506
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 507 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 543
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 458 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 517
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 518 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 557
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 558 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 609
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 610 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 658
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 659 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 695
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 610 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 669
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 670 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 709
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 710 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 761
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 762 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 810
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 811 LEDGRTLSDYNIQKESTL 828
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 686 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 745
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 746 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 785
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 786 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 833
>gi|290979900|ref|XP_002672671.1| polyubiquitin [Naegleria gruberi]
gi|284086249|gb|EFC39927.1| polyubiquitin [Naegleria gruberi]
Length = 293
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 61/277 (22%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + G +F I+V D++ +IKE + + QGIP P Q L+ NG+ L+D + ++ E
Sbjct: 1 MQLFIKTLSGHSFPIDVECTDSIEKIKELVNEKQGIPPPSQRLILNGKKLEDGKTIQDYE 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
+ Q+S I L ++ + L+++ NDT+
Sbjct: 61 MKQDSTIYLALS--------------------------------WRDTITLEVESNDTIE 88
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 89 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 140
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ++D + ++ ++Q +P D I+
Sbjct: 141 M-----QIFVKTLTG-KTITLEVESNDTIENVKSKIQDKE-----GIPPDQQRLIFAGKQ 189
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 190 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 226
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 114/247 (46%), Gaps = 39/247 (15%)
Query: 12 AFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLV 71
T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++
Sbjct: 76 TITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 135
Query: 72 ASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMES 131
Q+ + + KT + L+++ NDT+ +K KI + E
Sbjct: 136 RLRGGMQIFVKTLT--------------GKT------ITLEVESNDTIENVKSKIQDKEG 175
Query: 132 IPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVL 191
IP ++ + +G +L+D R+L D + + + + +R GM ++ V
Sbjct: 176 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVK 222
Query: 192 TQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHH 251
T G K I +EV ++D + ++ ++Q +P D I+ ++D R+ ++
Sbjct: 223 TLTG-KTITLEVESNDTIENVKSKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYN 276
Query: 252 VGQGDTI 258
+ + T+
Sbjct: 277 IQKESTL 283
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 141 MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 200
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ NDT+
Sbjct: 201 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESNDTIE 240
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 241 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 288
>gi|302393783|sp|P59669.2|UBIQP_GEOCY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|11154|emb|CAA50268.1| ubiquitin [Geodia cydonium]
Length = 457
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + VR G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVVR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+V Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVVRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 430 LEDGRTLSDYNIQKESTL 447
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|578549|emb|CAA80335.1| ubiquitin [Tetrahymena pyriformis]
Length = 303
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T++V D + IK KI+ +GIP +Q L+F G+ L+D+R V
Sbjct: 77 MQVFVKTLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDERTVSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + + LD+D +D +
Sbjct: 137 IQKESTLHLVLRLRGGMQVFVKTLTG--------------------KTITLDIDSSDNIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R++ D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPADQQRLIFAGKQLEDGRTVTDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ + T G K I ++VN++DN+ +++ ++Q +P D I+
Sbjct: 229 M-----QIFMKTLTG-KTITLDVNSADNIEKVKAQIQDKE-----GIPVDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
++D ++ +++ + T+ +
Sbjct: 278 LEDGKTVSDYNISKESTLNL 297
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 121/277 (43%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK ++V D + IK+KI +GIP +Q L+F G+ L+D R V
Sbjct: 1 MQIFVKTLTGKTVALDVSSTDNIDTIKQKIYDKEGIPSDQQRLIFAGKQLEDGRTVSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + + LD+ D +
Sbjct: 61 IQKESTVHLVLRLRGGMQVFVKTLTG--------------------KTITLDVAQTDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R++ D + + + + +R G
Sbjct: 101 NIKAKIQDKEGIPSDQQRLIFAGKQLEDERTVSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +++++SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QVFVKTLTG-KTITLDIDSSDNIENVKAKIQDKE-----GIPADQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTVTDYNIQKESTLHLVLRLRGGMQIFMKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T+++ D + +K KI+ +GIP +Q L+F G+ L+D R V
Sbjct: 153 MQVFVKTLTGKTITLDIDSSDNIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTVTDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q I +K KT + LD++ D +
Sbjct: 213 IQKESTLHLVLRLRGGMQ-----------IFMK---TLTGKT------ITLDVNSADNIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
++K +I + E IPV++ + +G +L+D +++ D + + +++ +R
Sbjct: 253 KVKAQIQDKEGIPVDQQRLIFAGKQLEDGKTVSDYNISKESTLNLVLR 300
>gi|70993888|ref|XP_751791.1| polyubiquitin UbiD/Ubi4 [Aspergillus fumigatus Af293]
gi|66849425|gb|EAL89753.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus Af293]
gi|159125290|gb|EDP50407.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus A1163]
Length = 314
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 128/277 (46%), Gaps = 40/277 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ SP+ + + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQI----WSPADSLITVVKTLTG-------KTITLEVESSDTID 109
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 110 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 161
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 162 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 210
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 211 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 247
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 162 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 221
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 222 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 261
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 262 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 309
>gi|578545|emb|CAA84813.1| ubiquitin [Tetrahymena pyriformis]
Length = 379
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T++V D + +K KI+ +GIP +Q L+F G+ L+D R V
Sbjct: 153 MQVFIKTLTGKTITLDVDSADNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + KT + LD+D +D +
Sbjct: 213 IQKESTLHLVLRLRGGMQVFVKTLT--------------GKT------ITLDVDSSDNIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R++ D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++VN++DN+ ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVNSTDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D RS +++ + T+
Sbjct: 354 LEDGRSIADYNISKESTL 371
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D + IK+KI+ +GIP +Q L+F G+ L+D R V
Sbjct: 1 MQIFVKTLTGKTVTLDVASTDNIENIKQKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + KT + LD+ D +
Sbjct: 61 IQKESTVHLVLRLRGGMQVFVKTLT--------------GKT------ITLDVAQTDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R++ D + + + + +R G
Sbjct: 101 NIKQKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ + T G K I ++V+++DN+ ++ ++Q +P D I+
Sbjct: 153 M-----QVFIKTLTG-KTITLDVDSADNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTVSDYNIQKESTL 219
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLDVNSTDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSIADYN 364
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 365 ISKESTLHLVL 375
>gi|32564339|ref|NP_741158.2| Protein UBQ-1, isoform c [Caenorhabditis elegans]
gi|373219553|emb|CCD68780.1| Protein UBQ-1, isoform c [Caenorhabditis elegans]
Length = 538
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q I +K I + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQ-----------IFVKTLIGKT---------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV ASD + ++ ++Q
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQ 487
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 480
Query: 121 RLKEKIHEMESIP 133
+K KI + E IP
Sbjct: 481 NVKAKIQDKEGIP 493
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNG 47
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>gi|25151716|ref|NP_741157.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
gi|302595957|sp|P0CG71.1|UBIQ1_CAEEL RecName: Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|373219552|emb|CCD68779.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
Length = 838
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q I +K I + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQ-----------IFVKTLIGKT---------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 810 LEDGRTLSDYNIQKESTL 827
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 745 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 784
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 832
>gi|578551|emb|CAA80337.1| ubiquitin [Tetrahymena pyriformis]
Length = 379
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 120/249 (48%), Gaps = 39/249 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V + DT+ ++K KI+ +GIP +Q L+F G+ L+D R V + ++S + L
Sbjct: 162 GKTITLDVEYNDTIEKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNLQKDSTLHL 221
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ QV + + KT + LD+D ++ + +K KI +
Sbjct: 222 VLRLRGGMQVFIKTLT--------------GKT------ITLDVDSSENIENVKAKIQDK 261
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R++ D + + + + +R GM ++
Sbjct: 262 EGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLR--------LRGGM-----QIF 308
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I ++VN++DN+ ++ ++Q +P D I+ ++D RS
Sbjct: 309 VKTLTG-KTITLDVNSTDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRSLSD 362
Query: 250 HHVGQGDTI 258
+++ + T+
Sbjct: 363 YNISKESTL 371
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 142/333 (42%), Gaps = 85/333 (25%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D+V IK+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTVTLDVAQTDSVENIKQKIQDKEGIPPDQQRLIFAGKQLEDARTLSDYN 60
Query: 61 ILQNSRIQLLV-----------------------ASDN----KPQVKTEQSSPSKKIHL- 92
I + S + L++ +SDN K +++ ++ P + L
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVDSSDNIENVKAKIQDKEGIPPDQQRLI 120
Query: 93 -------------KINIPSNSKTH---------------HHHHHLPLDMDVNDTVLRLKE 124
NI S H + LD++ NDT+ ++K
Sbjct: 121 FAGKQLEDGRTISDYNIQKESTLHLVLRLRGGIYLFVKTLTGKTITLDVEYNDTIEKVKA 180
Query: 125 KIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPR 184
KI + E IP ++ + +G +L+D R++ D L ++ + + +R GM
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNLQKDSTLHLVLR--------LRGGM--- 229
Query: 185 KLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDD 244
++ + T G K I ++V++S+N+ ++ ++Q +P D I+ ++D
Sbjct: 230 --QVFIKTLTG-KTITLDVDSSENIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDG 281
Query: 245 RSFRWHHVGQGDTI----------EIFNGSVTG 267
R+ +++ + T+ +IF ++TG
Sbjct: 282 RTVSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T++V + + +K KI+ +GIP +Q L+F G+ L+D R V
Sbjct: 229 MQVFIKTLTGKTITLDVDSSENIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ D +
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVNSTDNIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D RSL D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNISKESTLHLVLR 376
>gi|341879718|gb|EGT35653.1| hypothetical protein CAEBREN_32771 [Caenorhabditis brenneri]
Length = 970
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 57 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 116
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 117 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 156
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 157 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 208
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 209 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 257
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 258 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 294
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 209 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 268
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 269 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 308
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 309 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 360
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 361 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 409
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 410 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 446
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 361 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 420
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 421 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 460
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 461 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 512
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 513 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 561
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 562 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 598
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 513 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 572
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 573 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 612
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 613 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 664
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 665 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 713
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 714 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 750
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 665 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 724
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 725 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 764
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 765 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 816
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 817 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 865
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 866 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 902
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 817 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 876
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 877 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 916
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 917 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 964
>gi|393912430|gb|EJD76734.1| polyubiquitin, variant 2 [Loa loa]
Length = 322
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 18 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 77
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 78 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 117
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 118 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 169
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 170 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 218
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 219 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 255
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 170 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 229
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 230 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 269
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 270 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 317
>gi|297805150|ref|XP_002870459.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|297316295|gb|EFH46718.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
Length = 537
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KIE +GIP +Q L+F G+ L+D R +
Sbjct: 156 MQIFVKTLTGKTITLEVESSDTIDNVKAKIEDKEGIPTDQQRLIFAGKQLEDGRTLADYN 215
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 216 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 255
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
LK KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 256 NLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 307
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G + I +EV +SD + ++ ++Q + +P D I+
Sbjct: 308 M-----QIFVKTLTG-RTITLEVESSDTIDNVKAKIQDKEE-----IPADQQRLIFAGKQ 356
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 357 LEDGRTLADYNIQKESTLHLVLRLCGGMQIFVKTLTG 393
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GI +Q L+F G+ L+D R +
Sbjct: 80 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYN 139
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 140 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 179
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 180 NVKAKIEDKEGIPTDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 231
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + L+ ++Q +P D I+
Sbjct: 232 M-----QIFVKTLTG-KTITLEVESSDTIDNLKAKIQDKE-----GIPPDQQRLIFAGKQ 280
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 281 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 317
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + G+ T+EV DT+ +K KI+ + IP +Q L+F G+ L+D R +
Sbjct: 308 MQIFVKTLTGRTITLEVESSDTIDNVKAKIQDKEEIPADQQRLIFAGKQLEDGRTLADYN 367
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ + +I +K KT + L+++ +DT+
Sbjct: 368 IQKESTLHLVL-----------RLCGGMQIFVK---TLTGKT------ITLEVESSDTID 407
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 408 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 459
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 460 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 384 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 443
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 444 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 483
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E I ++ + +G +L+D R+L D + + + + +R
Sbjct: 484 NVKAKIQDKEGIVPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 531
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 119/267 (44%), Gaps = 49/267 (18%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K T++ T+ +K +I+ +GIP+ +Q L+F G+ L+D R + I + S + L
Sbjct: 14 KTITLDAESSYTINNVKAQIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESILHLA 73
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
+ Q+ + + KT + L+++ +DT+ +K KI + E
Sbjct: 74 LRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDKE 113
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLV 190
I ++ + +G +L+D R+L D + + + + +R GM ++ V
Sbjct: 114 GILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIFV 160
Query: 191 LTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWH 250
T G K I +EV +SD + ++ +++ +P D I+ ++D R+ +
Sbjct: 161 KTLTG-KTITLEVESSDTIDNVKAKIEDKE-----GIPTDQQRLIFAGKQLEDGRTLADY 214
Query: 251 HVGQGDTI----------EIFNGSVTG 267
++ + T+ +IF ++TG
Sbjct: 215 NIQKESTLHLVLRLRGGMQIFVKTLTG 241
>gi|61223100|gb|AAX40652.1| polyubiquitin [Oryza sativa Japonica Group]
Length = 381
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV F DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLVFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q LVF G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLVFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|302596001|sp|Q58G87.2|UBQ3_ORYSJ RecName: Full=Polyubiquitin 3; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
gi|39546234|emb|CAE04243.3| OSJNBa0089N06.4 [Oryza sativa Japonica Group]
gi|125591721|gb|EAZ32071.1| hypothetical protein OsJ_16259 [Oryza sativa Japonica Group]
Length = 381
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV F DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|324509924|gb|ADY44155.1| Polyubiquitin-A, partial [Ascaris suum]
Length = 626
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 18 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 77
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 78 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 117
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 118 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 169
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 170 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 218
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 219 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 255
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 170 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 229
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 230 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 269
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 270 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 321
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 322 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 370
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 371 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 407
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 322 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 382 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 421
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 422 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 473
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 474 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 522
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 523 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 559
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 474 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 533
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 534 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 573
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 574 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 621
>gi|312080345|ref|XP_003142560.1| ubiquitin C II [Loa loa]
gi|393912431|gb|EJD76735.1| polyubiquitin [Loa loa]
Length = 398
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 18 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 77
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 78 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 117
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 118 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 169
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 170 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 218
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 219 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 255
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 170 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 229
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 230 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 269
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 270 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 321
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 322 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 370
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 371 LEDGRTLSDYNIQKESTL 388
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 246 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 305
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 306 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 345
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 346 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 393
>gi|4150898|emb|CAA76577.1| polyubiquitin [Suberites domuncula]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|118370598|ref|XP_001018500.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300267|gb|EAR98255.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 547
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+++ FDTV +K KI+ +GIP +Q L+F G+ L D R V+
Sbjct: 153 MQIFVKTLTGKTVTLDLEPFDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD + +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------VTLDFEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L D R+L D + + + + +R G
Sbjct: 253 NIKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K + ++ ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTVTLDFEASDTIENIKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+DD R+ + +++ + T+ +IF ++TG
Sbjct: 354 LDDGRTVQDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++ DT+ ++K KI+ +GIP +Q L+F G+ L D R +
Sbjct: 1 MQIFVKTLTGKTITLDFEVSDTIEDVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD + +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------VTLDFEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L D R+L+D + + + + +R G
Sbjct: 101 NIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLQDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K + +++ D V ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTVTLDLEPFDTVENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+DD R+ + +++ + T+ +IF ++TG
Sbjct: 202 LDDGRTVQDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++ DT+ IK KI+ +GIP +Q L+F G+ L D R V+
Sbjct: 305 MQIFVKTLTGKTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ DTV
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------VTLDLEPCDTVE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L D R++ D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTISDYNIQKESTLHLVLRLRG--------- 455
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
L++ V T G K I +++ ASD + ++ ++Q +P D I+
Sbjct: 456 ----GLQIFVKTLTG-KTITLDLEASDTIENVKSKIQDKE-----GIPPDQQRLIFSGKC 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDFRTLSDYNIQKESTL 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+++ DTV +K KI+ +GIP +Q L+F G+ L D R +
Sbjct: 381 MQIFVKTLTGKTVTLDLEPCDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTISDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGLQIFVKTLT--------------GKT------ITLDLEASDTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + SG L+D R+L D + + + + +R
Sbjct: 481 NVKSKIQDKEGIPPDQQRLIFSGKCLEDFRTLSDYNIQKESTLHLVLR 528
>gi|350416822|ref|XP_003491120.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Bombus
impatiens]
Length = 611
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 124/277 (44%), Gaps = 47/277 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ K+ + D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKA---KIQDKEGIPRSPDQQRLIFAGKQ 507
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 508 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 544
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVP--KQTLVFNGQVLQDDRDVEH 58
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPRSPDQQRLIFAGKQLEDGRTLSD 516
Query: 59 CEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDT 118
I + S + L++ Q+ + + KT + L+++ +DT
Sbjct: 517 YNIQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDT 556
Query: 119 VLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 606
>gi|19698797|gb|AAL91109.1| ubiquitin [Onchocerca volvulus]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|350420431|ref|XP_003492506.1| PREDICTED: polyubiquitin-like [Bombus impatiens]
Length = 471
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 119/260 (45%), Gaps = 33/260 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEID--VHVRPSPTATSTTS 178
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGSHLVLRLR 388
Query: 179 SGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQ 238
GM ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 389 GGM-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAG 437
Query: 239 NVMDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 438 KQLEDGRTLSDYNIQKESTL 457
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 391 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 450
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 451 IQKESTLHLVL 461
>gi|112983984|ref|NP_001036839.1| polyubiquitin [Bombyx mori]
gi|4587236|dbj|BAA76676.1| polyubiquitin [Bombyx mori]
Length = 913
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 430 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 466
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 810 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 532
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 533 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 581
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 582 LENGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 618
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLENGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 684
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 685 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 733
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 734 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 770
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 821 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 860
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 861 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
>gi|393912432|gb|EJD76736.1| polyubiquitin, variant 1 [Loa loa]
Length = 381
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|229577230|ref|NP_001153331.1| ubiquitin C-like [Nasonia vitripennis]
Length = 610
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|307206691|gb|EFN84646.1| Ubiquitin [Harpegnathos saltator]
Length = 686
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|4150912|emb|CAA72799.1| polyubiquitin precursor [Suberites domuncula]
Length = 381
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|268571891|ref|XP_002641176.1| C. briggsae CBR-UBQ-1 protein [Caenorhabditis briggsae]
Length = 762
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
>gi|328792775|ref|XP_395993.4| PREDICTED: polyubiquitin-A-like isoform 1 [Apis mellifera]
Length = 795
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLR 756
>gi|328780728|ref|XP_003249850.1| PREDICTED: polyubiquitin-A-like [Apis mellifera]
Length = 685
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|66510555|ref|XP_393173.2| PREDICTED: polyubiquitin-A-like isoform 1 [Apis mellifera]
gi|328780726|ref|XP_003249849.1| PREDICTED: polyubiquitin-A-like [Apis mellifera]
Length = 761
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
>gi|308497342|ref|XP_003110858.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
gi|308242738|gb|EFO86690.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
Length = 920
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 615 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 674
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 675 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 714
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 715 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 766
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 767 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 815
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 816 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 852
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 55/283 (19%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSG------AELQDHRSLRDCELMDNAEIDVHVRPSPTAT 174
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKNNCERKQLEDGRTLSDYNIQKESTLHLVLR------ 610
Query: 175 STTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFF 234
GM ++ V T G K I +EV ASD + ++ ++Q +P D
Sbjct: 611 --LRGGM-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRL 657
Query: 235 IYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
I+ ++D R+ +++ + T+ +IF ++TG
Sbjct: 658 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 700
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 767 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 826
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 827 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 866
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 867 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 914
>gi|156552611|ref|XP_001599434.1| PREDICTED: polyubiquitin-A-like isoform 1 [Nasonia vitripennis]
gi|345487600|ref|XP_003425726.1| PREDICTED: polyubiquitin-A-like isoform 2 [Nasonia vitripennis]
Length = 913
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 810 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 821 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 860
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 861 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
>gi|115460714|ref|NP_001053957.1| Os04g0628100 [Oryza sativa Japonica Group]
gi|113565528|dbj|BAF15871.1| Os04g0628100 [Oryza sativa Japonica Group]
Length = 392
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV F DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 12 MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 71
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 72 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 111
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 112 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 163
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 164 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 212
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 213 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 249
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 164 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 223
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 224 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 263
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 264 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 315
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 316 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 364
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 365 LEDGRTLADYNIQKESTL 382
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 240 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 299
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 300 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 339
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 340 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 387
>gi|156482|gb|AAA28154.1| polyubiquitin [Caenorhabditis elegans]
Length = 838
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 810 LEDGRTLSDYNIQKQSTL 827
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 745 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 784
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVLR 832
>gi|332023427|gb|EGI63670.1| Ubiquitin [Acromyrmex echinatior]
Length = 534
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|307172602|gb|EFN63961.1| Ubiquitin [Camponotus floridanus]
Length = 459
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|195435796|ref|XP_002065865.1| GK20481 [Drosophila willistoni]
gi|194161950|gb|EDW76851.1| GK20481 [Drosophila willistoni]
Length = 611
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|62083359|gb|AAX62404.1| polyubiquitin [Lysiphlebus testaceipes]
Length = 538
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 430 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 466
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFVGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|332021030|gb|EGI61419.1| Ubiquitin [Acromyrmex echinatior]
Length = 459
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|290750644|gb|ADD52202.1| ubiquitin [Catharanthus roseus]
gi|341869050|gb|AEK98798.1| ubiquitin [Carthamus tinctorius]
Length = 381
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT +K KI+ +GIP +Q L+F G+ L+D R + C
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADCN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K K + +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKTQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTTD 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L DC + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADCNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLILAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|324514657|gb|ADY45941.1| Polyubiquitin-A, partial [Ascaris suum]
Length = 474
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 41/209 (19%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAG-------TLSDYNIQKESTLHLVLR--------LRGG 449
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNV 209
M ++ V T G K I +EV ASD +
Sbjct: 450 M-----QIFVKTLTG-KTITLEVEASDTI 472
>gi|324520160|gb|ADY47572.1| Polyubiquitin-A, partial [Ascaris suum]
Length = 354
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 46/266 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQR-------YHF---HLPQD 230
M ++ V T G K I +EV ASD + ++ ++Q R Y F +P D
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGRGELRTMIYGFGDDKVPYD 282
Query: 231 GYFFIYKQNVMDDDRSF--RWHHVGQ 254
+ + V+D R R HVG+
Sbjct: 283 KTLELLENIVVDYIRELCQRALHVGK 308
>gi|358336555|dbj|GAA55031.1| ubiquitin C [Clonorchis sinensis]
Length = 228
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|340727978|ref|XP_003402310.1| PREDICTED: polyubiquitin-B-like isoform 1 [Bombus terrestris]
gi|340727980|ref|XP_003402311.1| PREDICTED: polyubiquitin-B-like isoform 2 [Bombus terrestris]
gi|340727982|ref|XP_003402312.1| PREDICTED: polyubiquitin-B-like isoform 3 [Bombus terrestris]
Length = 229
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|19698785|gb|AAL91103.1| ubiquitin [Acanthocheilonema viteae]
Length = 258
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 30 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 89
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 90 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 129
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 130 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 181
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 182 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 230
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 231 LEDGRTLSDYNIQKESTL 248
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 106 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 165
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 166 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 205
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 206 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 253
>gi|170584490|ref|XP_001897032.1| polyubiquitin precursor [Brugia malayi]
gi|158595567|gb|EDP34110.1| polyubiquitin precursor, putative [Brugia malayi]
Length = 391
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 87 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 146
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 147 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 186
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 187 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 238
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 239 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 287
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 288 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 324
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 239 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 298
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 299 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 338
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 339 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 386
>gi|773586|emb|CAA35579.1| ubiquitin [Tetrahymena pyriformis]
Length = 264
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D + IK+KI+ +GIP +Q L+F G+ L++ R V
Sbjct: 1 MQIFVKTLTGKTVTLDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRTVSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + + LD+ D +
Sbjct: 61 IQKESTVHLVLRLRGGMQVFVKTLTG--------------------KTITLDVAQTDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R++ D + + + + +R G
Sbjct: 101 NIKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EVN+SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QVFVKTLTG-KTITLEVNSSDNIESIKSKIQDKE-----GIPSDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRNISDYNIQKESTL 219
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T++V D + IK KI+ +GIP +Q L+F G+ L+D R V
Sbjct: 77 MQVFVKTLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV ++ K I L++N +D +
Sbjct: 137 IQKESTLHLVLRLRGGMQVFV-KTLTGKTITLEVN-------------------SSDNIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R++ D + + + + +R G
Sbjct: 177 SIKSKIQDKEGIPSDQQRLIFAGKQLEDGRNISDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I ++V++SDN+ ++ ++Q
Sbjct: 229 M-----QVFVKTLTG-KTITLDVDSSDNIENVKAKIQ 259
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T+EV D + IK KI+ +GIP +Q L+F G+ L+D R++
Sbjct: 153 MQVFVKTLTGKTITLEVNSSDNIESIKSKIQDKEGIPSDQQRLIFAGKQLEDGRNISDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + + LD+D +D +
Sbjct: 213 IQKESTLHLVLRLRGGMQVFVKTLTG--------------------KTITLDVDSSDNIE 252
Query: 121 RLKEKIHEMESI 132
+K KI + E I
Sbjct: 253 NVKAKIQDKEGI 264
>gi|356565543|ref|XP_003550999.1| PREDICTED: polyubiquitin-C-like [Glycine max]
Length = 533
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI E E IP ++ + +G +L+D R+L D E+ + + + +R G
Sbjct: 405 NVKAKIEEKEGIPPDQQRLIFAGKQLEDGRTLEDYEIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q+ +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEGSDTIENVKAKIQEKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D+R+ + + + T+
Sbjct: 506 LEDERTLEDYDIQKESTL 523
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KIE+ +GIP +Q L+F G+ L+D R +E E
Sbjct: 381 MQIFVKTLTGKTITLEVESSDSIENVKAKIEEKEGIPPDQQRLIFAGKQLEDGRTLEDYE 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI E E IP ++ + +G +L+D R+L D ++ + + + +R
Sbjct: 481 NVKAKIQEKEGIPPDQQRLIFAGKQLEDERTLEDYDIQKESTLHLVLR 528
>gi|302595947|sp|P0CG73.1|UBI1P_CANAL RecName: Full=Polyubiquitin; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
gi|1143188|gb|AAA84868.1| ubiquitin precursor [Candida albicans]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ S Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRSRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|307193107|gb|EFN76024.1| Ubiquitin [Harpegnathos saltator]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVRTLAGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|356548015|ref|XP_003542399.1| PREDICTED: polyubiquitin-A-like [Glycine max]
Length = 614
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 127/277 (45%), Gaps = 44/277 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITL--------------ETITLEVESSDTID 257
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 258 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 309
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 310 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 358
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 359 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 395
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 310 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 369
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 370 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 409
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 410 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 461
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 462 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 510
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 511 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 547
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 462 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 521
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 522 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------VTLEVESSDTID 561
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 562 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 609
>gi|358332080|dbj|GAA27344.2| polyubiquitin-A [Clonorchis sinensis]
Length = 288
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 61 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 120
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 121 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 160
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 161 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 212
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 213 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 261
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 262 LEDGRTLSDYNIQKESTL 279
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 137 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 196
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 197 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 236
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 237 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 284
>gi|2894308|emb|CAA11269.1| polyubiquitin [Nicotiana tabacum]
Length = 381
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 129/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIENVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + +++++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIENVKQKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|302393778|sp|P42739.2|UBIQP_ACECL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related 1; Contains:
RecName: Full=Ubiquitin-related 2; Flags: Precursor
gi|433970|emb|CAA82268.1| polyubiquitin [Acetabularia peniculus]
Length = 423
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DTV +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 118 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 177
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DTV
Sbjct: 178 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTVE 217
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 218 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 269
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD V ++ ++Q +P D I+
Sbjct: 270 M-----QIFVKTLTG-KTITLEVESSDTVENVKSKIQDKE-----GIPPDQQRLIFAGKQ 318
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 319 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 355
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DTV +K KI+ +GIP +Q L+F G+ L+D +
Sbjct: 42 MQIFVKTLTGKTITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYN 101
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DTV
Sbjct: 102 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTVE 141
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 142 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 193
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD V ++ ++Q +P D I+
Sbjct: 194 M-----QIFVKTLTG-KTITLEVESSDTVENVKSKIQDKE-----GIPPDQQRLIFAGKQ 242
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 243 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 279
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DTV +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 270 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 329
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DTV
Sbjct: 330 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTVE 369
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 370 NVKSKIQDKEGIPPDQQRIIFAGKQLEDGRTLADYNIQKESTLHLVLR 417
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 105/242 (43%), Gaps = 49/242 (20%)
Query: 36 IPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKIN 95
IP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 1 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT---------- 50
Query: 96 IPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDC 155
KT + L++ +DTV +K KI + E IP ++ + +G +L+D +L D
Sbjct: 51 ----GKT------ITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADY 100
Query: 156 ELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
+ + + + +R GM ++ V T G K I +EV +SD V ++ +
Sbjct: 101 NIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTVENVKSK 146
Query: 216 LQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSV 265
+Q +P D I+ ++D R+ +++ + T+ +IF ++
Sbjct: 147 IQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 201
Query: 266 TG 267
TG
Sbjct: 202 TG 203
>gi|3047318|gb|AAC13691.1| poly-ubiquitin [Magnaporthe grisea]
Length = 379
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 41/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ + VKT KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRGGMQIFVKT----------------LTGKT------ITLEVESSDTID 250
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 251 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 302
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 303 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 351
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 352 LEDGRTLSDYNIQKESTL 369
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 123/275 (44%), Gaps = 47/275 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI--------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRGGMQIFVKTLTG 236
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 227 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 286
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 287 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 326
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 327 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 374
>gi|440798058|gb|ELR19129.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIENVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|27734375|gb|AAM51216.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 255
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 128/270 (47%), Gaps = 47/270 (17%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD++ +DT+ +K+KI +
Sbjct: 63 VLRL---------RGGSGMQIFVK---TLTGKT------ITLDVESSDTIETVKQKIQDK 104
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R SGM ++
Sbjct: 105 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG------GSGM-----QIF 153
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I ++V +SD + +++++Q +P D I+ ++D R+
Sbjct: 154 VKTLTG-KTITLDVESSDTIETVKQKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLAD 207
Query: 250 HHVGQ------------GDTIEIFNGSVTG 267
+++ + G ++IF ++TG
Sbjct: 208 YNIQKESTLHLVLRLRGGSGMQIFVKTLTG 237
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 30/214 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 72 MQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 131
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ + +I +K KT + LD++ +DT+
Sbjct: 132 IQKESTLHLVLRL---------RGGSGMQIFVK---TLTGKT------ITLDVESSDTIE 173
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R SG
Sbjct: 174 TVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG------GSG 227
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRK 214
M ++ V T G K I ++V +SD + +++
Sbjct: 228 M-----QIFVKTLTG-KTITLDVESSDTIETVKQ 255
>gi|164510214|emb|CAJ41447.1| polyubiquitin [Paralvinella grasslei]
Length = 304
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQRRLIFAGKQLEDGRTLSDYNIQKKSTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 125/268 (46%), Gaps = 40/268 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP ++ L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQRRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKKSTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD++ ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEASDSIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTIEIFNGSVTGG 268
++D R+ +++ + T+ + S+ GG
Sbjct: 278 LEDGRTLSDYNIQKESTLHLVL-SLRGG 304
>gi|118370594|ref|XP_001018498.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300265|gb|EAR98253.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 304
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +D++
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDSIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|85091236|ref|XP_958803.1| polyubiquitin [Neurospora crassa OR74A]
gi|302595953|sp|P0CG70.1|UBI4P_NEUCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|295930|emb|CAA31530.1| ubiquitin [Neurospora crassa]
gi|28920189|gb|EAA29567.1| polyubiquitin [Neurospora crassa OR74A]
gi|336466506|gb|EGO54671.1| polyubiquitin [Neurospora tetrasperma FGSC 2508]
gi|350286609|gb|EGZ67856.1| polyubiquitin [Neurospora tetrasperma FGSC 2509]
Length = 305
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 129/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|302595967|sp|P0CG82.1|UBIQP_TETPY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|578547|emb|CAA43387.1| ubiquitin [Tetrahymena pyriformis]
Length = 381
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|294891345|ref|XP_002773533.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
gi|239878705|gb|EER05349.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
Length = 458
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|118358270|ref|XP_001012381.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|118364888|ref|XP_001015665.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|1778712|gb|AAC47430.1| polyubiquitin [Tetrahymena thermophila]
gi|89294148|gb|EAR92136.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
gi|89297432|gb|EAR95420.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 381
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|294885539|ref|XP_002771351.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
gi|239874907|gb|EER03167.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
Length = 458
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------DKTITLDVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|118370590|ref|XP_001018496.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|118370606|ref|XP_001018504.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300263|gb|EAR98251.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
gi|89300271|gb|EAR98259.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 304
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|226499354|ref|NP_001147027.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
gi|195606596|gb|ACG25128.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
Length = 311
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 128/277 (46%), Gaps = 43/277 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R++
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRNLIFSP 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
+N+ SD + SP + K+ I + T + L+++ +DT+
Sbjct: 61 FARNAHTARSPISDPR--------SPRRS---KMQIFVKTLT---GKTITLEVESSDTID 106
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 107 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 158
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 159 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 207
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 208 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 244
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 83 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 142
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 143 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 182
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 183 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 234
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 235 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 283
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 284 LEDGRTLADYNIQKESTL 301
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 159 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 218
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 219 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 258
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 259 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 306
>gi|294887015|ref|XP_002771956.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
gi|239875778|gb|EER03772.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
Length = 230
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|343485975|dbj|BAK61744.1| ubiquitin [Collozoum amoeboides]
Length = 228
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 120/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIS 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V +SD +S ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVESSDTISNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIS 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|118370600|ref|XP_001018501.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300268|gb|EAR98256.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 228
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|302655191|ref|XP_003019389.1| hypothetical protein TRV_06592 [Trichophyton verrucosum HKI 0517]
gi|291183107|gb|EFE38744.1| hypothetical protein TRV_06592 [Trichophyton verrucosum HKI 0517]
Length = 438
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 34/252 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 5 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 64
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ + T K + K + L+++ +DT+
Sbjct: 65 IQKESTLHLVLRLRGETTTNTISQPVVKTLTGKT--------------ITLEVESSDTID 110
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 111 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 162
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 163 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 211
Query: 241 MDDDRSFRWHHV 252
++D R+ W V
Sbjct: 212 LEDGRTL-WMGV 222
>gi|336271700|ref|XP_003350608.1| hypothetical protein SMAC_07925 [Sordaria macrospora k-hell]
gi|380089527|emb|CCC12626.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 229
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|28436479|gb|AAO43306.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + F+ GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 21 MQIFFKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 80
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q I LK KT + L+++ +DT+
Sbjct: 81 IQKESTLHLVLRLRGGMQ-----------IFLK---TLTGKT------ITLEVESSDTID 120
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 121 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 172
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +S+ + ++ ++Q +P D I+
Sbjct: 173 M-----QIFVKTLTG-KTITLEVESSNTIDNVKAKIQDKE-----WIPPDQQRLIFAGKQ 221
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 222 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 258
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 25/170 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV +T+ +K KI+ + IP +Q L+F G+ L+D R +
Sbjct: 173 MQIFVKTLTGKTITLEVESSNTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 232
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ + T+
Sbjct: 233 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSGTID 272
Query: 121 RLKEKIHEMESIPVN--RLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP + RL+ G +L+D R+L D + + + + +R
Sbjct: 273 NVKAKIQDKEGIPPDQQRLIF---GKQLEDGRTLADYNIQKESTLHLVLR 319
>gi|576773|gb|AAA82978.1| polyubiquitin [Cryptococcus neoformans var. grubii]
Length = 381
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+DD R+ +++ + T+ +IF ++TG
Sbjct: 202 LDDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|307108562|gb|EFN56802.1| hypothetical protein CHLNCDRAFT_51574 [Chlorella variabilis]
Length = 979
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 751 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 810
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 811 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 850
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 851 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 902
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 903 M-----QIFVKTLTG-KTITLEVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 951
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
++D R+ +++ + T+ +
Sbjct: 952 LEDGRTLADYNIQKESTLHL 971
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 39/251 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 80 GKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 139
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 140 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIENVKAKIQDK 179
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 180 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 226
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 227 VKTLTG-KTITLEVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLAD 280
Query: 250 HHVGQGDTIEI 260
+++ + T+ +
Sbjct: 281 YNIQKESTLHL 291
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 827 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 886
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 887 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 926
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 927 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 974
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 22/168 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 147 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 206
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 207 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 246
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAE--IDVH 166
+K KI + E IP ++ + +G +L+D R+L D + + +D+H
Sbjct: 247 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLDLH 294
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 126/308 (40%), Gaps = 80/308 (25%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQ-------------------------- 34
M + + GK T+EV DT+ +K KI+ +
Sbjct: 644 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEDQTCLPVRIKLVWSLCRWYVLSTLPN 703
Query: 35 -----GIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKK 89
GIP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 704 PAAAAGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT---- 759
Query: 90 IHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDH 149
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D
Sbjct: 760 ----------GKT------ITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 803
Query: 150 RSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNV 209
R+L D + + + + +R GM ++ V T G K I +EV +SD +
Sbjct: 804 RTLADYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTI 849
Query: 210 SELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------E 259
++ ++Q +P D I+ ++D R+ +++ + T+ +
Sbjct: 850 ENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 904
Query: 260 IFNGSVTG 267
IF ++TG
Sbjct: 905 IFVKTLTG 912
>gi|440796241|gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 120/258 (46%), Gaps = 48/258 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+ VKT KT + L+++ +DT+
Sbjct: 61 IQKESTLHLIF-------VKT----------------LTGKT------ITLEVESSDTIE 91
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 92 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 143
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + +++++Q +P D I+
Sbjct: 144 M-----QIFVKTLTG-KTITLEVESSDTIENVKQKIQDKE-----GIPPDQQRLIFAGKQ 192
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 193 LEDGRTLADYNIQKESTL 210
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 20/159 (12%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 77 GKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 136
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K+KI +
Sbjct: 137 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIENVKQKIQDK 176
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 215
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 144 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 203
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 204 IQKESTLHLVL 214
>gi|126352454|ref|NP_001075331.1| ubiquitin C [Equus caballus]
gi|302393801|sp|Q8MKD1.3|UBB_HORSE RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|21070215|gb|AAM34211.1|AF506969_1 ubiquitin [Equus caballus]
Length = 305
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D FI+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRFIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q +F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|156358391|ref|XP_001624503.1| predicted protein [Nematostella vectensis]
gi|156211288|gb|EDO32403.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D FI+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRFIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|53850089|emb|CAH59739.1| polyubiquitin [Plantago major]
Length = 232
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 42/270 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTIEI---FNGSVTG 267
++D R+ +++ + T+ + G +TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGLTG 231
>gi|32400967|gb|AAP80689.1| polyubiquitin [Griffithsia japonica]
Length = 246
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 18 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 77
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 78 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 117
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 118 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 169
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 170 M-----QIFVKTLTG-KTITLEVESSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 218
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 219 LEDGRTLSDYNIQKESTL 236
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 94 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 153
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 154 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 193
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 194 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 241
>gi|325181623|emb|CCA16073.1| polyubiquitin putative [Albugo laibachii Nc14]
Length = 538
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLADYNIQKESTL 523
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528
>gi|357123401|ref|XP_003563399.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Brachypodium
distachyon]
Length = 535
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 47/277 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR---------- 378
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
G + +++ V T G K I + V +SD + ++ ++Q LP D I+
Sbjct: 379 -GGQXMQIFVKTLTG-KTITLXVESSDTIDNVKSKIQDKE-----GLPPDQQRLIFAGKQ 431
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 432 LEDGRTLADYNIQKXSTLHLVLRLRGGMQIFVKTLTG 468
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 51/279 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQ------------GDTIEIFNGSVTG 267
++D R+ +++ + G ++IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGQXMQIFVKTLTG 392
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+ V DT+ +K KI+ +G+P +Q L+F G+ L+D R +
Sbjct: 383 MQIFVKTLTGKTITLXVESSDTIDNVKSKIQDKEGLPPDQQRLIFAGKQLEDGRTLADYN 442
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L++ +DT+
Sbjct: 443 IQKXSTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVKSSDTID 482
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E P ++ + +G +L+D R+L D + + + + +R
Sbjct: 483 NVKAKIQDKEGTPPDQQQLIFAGKQLEDGRTLADYNIQKESTLHLVLR 530
>gi|226289971|gb|EEH45455.1| ubiquitin [Paracoccidioides brasiliensis Pb18]
Length = 305
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|56684130|gb|AAW22168.1| polyubiquitin [Monocercomonoides sp. PA203]
Length = 229
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R ++
Sbjct: 1 MQIFVKTLTGKTITLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + + + L++ Q+ + + KT + L+++ DT+
Sbjct: 61 IQKEATLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVENADTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L+D + A + + +R G
Sbjct: 101 SVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYNIQKEATLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +D + +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVENADTIESVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ + +++
Sbjct: 202 LEDGRTLQDYNI 213
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 85/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R ++
Sbjct: 77 MQIFVKTLTGKTITLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + + + L++ Q+ + + KT + L+++ DT+
Sbjct: 137 IQKEATLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVENADTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L+D + A + + +R
Sbjct: 177 SVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYNIQKEATLHLVLR 224
>gi|290984061|ref|XP_002674746.1| polyubiquitin [Naegleria gruberi]
gi|284088338|gb|EFC42002.1| polyubiquitin [Naegleria gruberi]
Length = 229
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ NDT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESNDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ++D + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESNDTIENVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ NDT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESNDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|290987764|ref|XP_002676592.1| polyubiquitin [Naegleria gruberi]
gi|290995460|ref|XP_002680313.1| polyubiquitin [Naegleria gruberi]
gi|284090195|gb|EFC43848.1| polyubiquitin [Naegleria gruberi]
gi|284093933|gb|EFC47569.1| polyubiquitin [Naegleria gruberi]
Length = 305
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ NDT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESNDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ++D + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESNDTIENVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ NDT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESNDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|157093353|gb|ABV22331.1| ubiquitin [Noctiluca scintillans]
Length = 302
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYSIQKESTLHLVLR 300
>gi|255714909|ref|XP_002553736.1| KLTH0E05852p [Lachancea thermotolerans]
gi|238935118|emb|CAR23299.1| KLTH0E05852p [Lachancea thermotolerans CBS 6340]
Length = 409
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 105 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 164
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 165 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 204
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 205 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 256
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 257 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 305
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 306 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 342
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 257 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 316
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 317 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 356
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 357 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 404
>gi|157093211|gb|ABV22260.1| polyubiquitin [Karlodinium micrum]
Length = 536
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLDVEASDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 506 LEDGRTLSDYNI 517
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|297808451|ref|XP_002872109.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317946|gb|EFH48368.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 383
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP+ +Q L+F G+ L+D R +
Sbjct: 2 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADYN 61
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 62 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 101
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 102 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 153
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 154 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 202
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 203 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 239
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 154 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 213
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 214 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 253
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 254 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 305
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 306 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GVPPDQQRLIFAGKQ 354
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 355 LEDGRTLADYNIQKESTL 372
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 230 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 289
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 290 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 329
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E +P ++ + +G +L+D R+L D + + + + +R
Sbjct: 330 NVKAKIQDKEGVPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 377
>gi|50725873|dbj|BAD33402.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125564138|gb|EAZ09518.1| hypothetical protein OsI_31793 [Oryza sativa Indica Group]
Length = 192
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 180 GMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDG-YFFIYKQ 238
G G +++ V+++CG R V V A V+ LR+EL++ F LP+DG YFFI++Q
Sbjct: 104 GGGAAAVRVNVVSRCGRGRAEVAVGARRAVAALRRELEERA----FPLPRDGAYFFIHRQ 159
Query: 239 NVMDDDRSFRWHHVGQGDTIEIFNGSVT 266
+VMD+ RSF WH V GD + +F GSVT
Sbjct: 160 SVMDESRSFEWHGVAAGDEVVVFEGSVT 187
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNG 47
MDV F ++F +EVGFFDTV +IK+K++ +G P +L NG
Sbjct: 1 MDVTFVCAGEESFKMEVGFFDTVHDIKQKLQSRRGWPAAAVSLFHNG 47
>gi|630479|pir||S43306 polyubiquitin 6 - Geodia cydonium
Length = 448
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 41/252 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + V +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETLHLVRLR----------GG 150
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 151 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 199
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 200 LEDGRTLSDYNI 211
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 42/252 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 225 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 284
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I Q + L+V Q+ + + KT + L+++ +DT+
Sbjct: 285 I-QKETLHLVVRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 323
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + V +R G
Sbjct: 324 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETLHLVRLR----------GG 373
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 374 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 422
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 423 LEDGRTLSDYNI 434
>gi|225682563|gb|EEH20847.1| ubiquitin [Paracoccidioides brasiliensis Pb03]
Length = 305
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|444434925|dbj|BAM77037.1| ubiquitin C [Homo sapiens]
Length = 685
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVELSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++++DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVELSDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 430 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 466
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRSIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ + + + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYSIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q +F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYS 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVELSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|297847850|ref|XP_002891806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337648|gb|EFH68065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 384
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 79 MQIFIKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 138
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 139 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 178
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 179 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 230
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + L+ ++Q +P D I+
Sbjct: 231 M-----QIFVKTLTG-KTITLEVESSDTIDNLKTKIQDKE-----GIPPDQQRLIFAGKQ 279
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 280 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 316
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 49/267 (18%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K T++V DT+ +K KI+ +GIP+ +Q L+F+G++L D R + I + S + L
Sbjct: 13 KTITLDVESSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKESILHLA 72
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
+ Q+ + + KT + L+++ +DT+ +K KI + E
Sbjct: 73 LRLRGGMQIFIKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDKE 112
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLV 190
IP ++ + +G +L+D R+L D + + + + +R GM ++ V
Sbjct: 113 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIFV 159
Query: 191 LTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWH 250
T G K I +EV +SD + ++ ++Q +P D I+ ++D R+ +
Sbjct: 160 KTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADY 213
Query: 251 HVGQGDTI----------EIFNGSVTG 267
++ + T+ +IF ++TG
Sbjct: 214 NIQKESTLHLVLRLRGGMQIFVKTLTG 240
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 231 MQIFVKTLTGKTITLEVESSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 290
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 291 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 330
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 331 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 378
>gi|323303927|gb|EGA57707.1| Ubi4p [Saccharomyces cerevisiae FostersB]
Length = 248
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKXLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
>gi|92790172|emb|CAI83755.1| Polyubiqutin 2 [Polyplastron multivesiculatum]
Length = 346
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 42 MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 101
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 102 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTID 141
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R G
Sbjct: 142 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGG 193
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 194 M-----QIFVKTLTG-KTITLEVEPSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 242
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D+R+ +++ + T+ +IF ++TG
Sbjct: 243 LEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 279
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 194 MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 253
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 254 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTID 293
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 294 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 341
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 49/242 (20%)
Query: 36 IPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKIN 95
IP +Q L+F G+ L+D+R + I + S + L++ Q+ ++ K I L++
Sbjct: 1 IPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE 59
Query: 96 IPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDC 155
PS DT+ +K KI + E IP ++ + +G +L+D+R+L D
Sbjct: 60 -PS------------------DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADY 100
Query: 156 ELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
+ + + + +R GM ++ V T G K I +EV SD + ++ +
Sbjct: 101 NIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVEPSDTIDNVKAK 146
Query: 216 LQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSV 265
+Q +P D I+ ++D+R+ +++ + T+ +IF ++
Sbjct: 147 IQDKE-----GIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 201
Query: 266 TG 267
TG
Sbjct: 202 TG 203
>gi|355568283|gb|EHH24564.1| Polyubiquitin-C [Macaca mulatta]
Length = 229
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R S G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LSGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ + S +I +K KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVL-----------RLSGGMQIFVKT---LTGKT------ITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|290462837|gb|ADD24466.1| Ubiquitin [Lepeophtheirus salmonis]
Length = 229
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|357474767|ref|XP_003607669.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
gi|355508724|gb|AES89866.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
Length = 448
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 220 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 279
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 280 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 319
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 320 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 371
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 372 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 420
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
++D R+ +++ + T+ +
Sbjct: 421 LEDGRTLADYNIQKESTLHL 440
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 296 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 355
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 356 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 395
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 396 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 443
>gi|340939025|gb|EGS19647.1| hypothetical protein CTHT_0041260 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 305
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|440473707|gb|ELQ42489.1| RING finger protein [Magnaporthe oryzae Y34]
Length = 1058
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|357474763|ref|XP_003607667.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
gi|355508722|gb|AES89864.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
Length = 752
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 220 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 279
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 280 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 319
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 320 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 371
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 372 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 420
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 421 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 457
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 372 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 431
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 432 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 471
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 472 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 523
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 524 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 572
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 573 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 609
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 524 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 583
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 584 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 623
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 624 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 675
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 676 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 724
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
++D R+ +++ + T+ +
Sbjct: 725 LEDGRTLADYNIQKESTLHL 744
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 600 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 659
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 660 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 699
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 700 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 747
>gi|396492504|ref|XP_003843815.1| hypothetical protein LEMA_P014660.1 [Leptosphaeria maculans JN3]
gi|312220395|emb|CBY00336.1| hypothetical protein LEMA_P014660.1 [Leptosphaeria maculans JN3]
Length = 395
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 91 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 150
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 151 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 190
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 191 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 242
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 243 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 291
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 292 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 328
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 243 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 302
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 303 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 342
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 343 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 390
>gi|15982787|gb|AAL09741.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
Length = 381
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLSLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + E +H+ S G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI--QKESTLHLVLS------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|384252612|gb|EIE26088.1| hexaubiquitin protein [Coccomyxa subellipsoidea C-169]
Length = 457
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIENVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIENVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|571519|gb|AAA75310.1| polyubiquitin [Gracilaria gracilis]
gi|1095488|prf||2109223A poly-ubiquitin
Length = 457
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + +KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------AKT------ITLEVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|92790170|emb|CAI83754.1| Polyubiqutin 1 [Polyplastron multivesiculatum]
Length = 379
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 75 MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 134
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 135 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTID 174
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R G
Sbjct: 175 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGG 226
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 227 M-----QIFVKTLTG-KTITLEVEPSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 275
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D+R+ +++ + T+ +IF ++TG
Sbjct: 276 LEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 312
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D+R + I + S + L
Sbjct: 8 GKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 67
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ ++ K I L++ PS DT+ +K KI +
Sbjct: 68 VLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIDNVKAKIQDK 107
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D+R+L D + + + + +R GM ++
Sbjct: 108 EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 154
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV SD + ++ ++Q +P D I+ ++D+R+
Sbjct: 155 VKTLTG-KTITLEVEPSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDNRTLAD 208
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 209 YNIQKESTLHLVLRLRGGMQIFVKTLTG 236
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 227 MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 286
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 287 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTID 326
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 327 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 374
>gi|440482103|gb|ELQ62622.1| RING finger protein [Magnaporthe oryzae P131]
Length = 1056
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
++D R+ +++ + T+ +
Sbjct: 202 LEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|510473|emb|CAA52416.1| polyubiquitin [Artemia franciscana]
Length = 697
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ QGIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 430 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 466
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 532
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 533 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 581
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 582 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 618
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + + IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|28436487|gb|AAO43310.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ IK KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 21 MQIFVKTLTGKTITLEVKSSDTIDNIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 80
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + KI + L+++ +DT+
Sbjct: 81 IQKESTLHLVLRLRGGMQIFVK--TLTGKI------------------ITLEVESSDTID 120
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 121 NVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 172
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 173 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 221
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 222 LEDGRTLAVYNIQKESTL 239
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 173 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYN 232
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 233 IQKESTLHLVL 243
>gi|391348265|ref|XP_003748368.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Metaseiulus
occidentalis]
Length = 913
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 745 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 784
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 836
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q P D I+
Sbjct: 837 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GXPPDQQRLIFAGKQ 885
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 886 LEDGRTLSDYNIQKESTL 903
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYS 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 810 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVELADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G I ++V ASD + ++ +LQ +P D I+
Sbjct: 153 M-----QIFVKTLTGXT-ITLDVEASDTIENVKVKLQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ + + + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYSIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 532
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 533 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 581
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 582 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 618
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 430 LEDGRTLLDYNIQKESTLHLVLRLRGGMQIFVKTLTG 466
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + G T++V DT+ +K K++ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGXTITLDVEASDTIENVKVKLQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 354 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 761 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 821 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 860
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E P ++ + +G +L+D R+L D + + + + +R
Sbjct: 861 NVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
>gi|384246185|gb|EIE19676.1| polyubiquitin [Coccomyxa subellipsoidea C-169]
Length = 305
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIENVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|15284034|dbj|BAB63445.1| ubiquitin 4 [Physarum polycephalum]
gi|19909906|dbj|BAB87826.1| polyubiquitin [Physarum polycephalum]
Length = 305
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 SVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIESVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 SVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|357148706|ref|XP_003574865.1| PREDICTED: polyubiquitin-like [Brachypodium distachyon]
Length = 341
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 37 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 96
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 97 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 136
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 137 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 188
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 189 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 237
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 238 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 274
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 189 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 248
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 249 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 288
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 289 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 336
>gi|62911180|gb|AAX56917.1| polyubiquitin [Gracilaria lemaneiformis]
Length = 457
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVESSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 430 LEDGRTLSDYNI 441
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNS 65
I + S
Sbjct: 441 IQKES 445
>gi|15284030|dbj|BAB63443.1| ubiquitin 2 [Physarum polycephalum]
gi|19909902|dbj|BAB87824.1| polyubiquitin [Physarum polycephalum]
Length = 229
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 SVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIESVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 SVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|15284032|dbj|BAB63444.1| ubiquitin 3 [Physarum polycephalum]
gi|19909904|dbj|BAB87825.1| polyubiquitin [Physarum polycephalum]
Length = 305
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 SVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIESVKTKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLSDYNIQKESTL 295
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IHKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 SVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIESVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 SVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|328867151|gb|EGG15534.1| ubiquitin [Dictyostelium fasciculatum]
Length = 380
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|322699454|gb|EFY91215.1| ubiquitin [Metarhizium acridum CQMa 102]
Length = 343
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 39 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 98
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 99 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 138
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 139 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 190
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 191 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 239
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 240 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 276
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 191 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 250
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 251 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 290
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 291 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 338
>gi|56754831|gb|AAW25598.1| unknown [Schistosoma japonicum]
Length = 381
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KIH+ E IP ++ +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIHDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI +GIP +Q +F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIHDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|162461367|ref|NP_001105376.1| polyubiquitin [Zea mays]
gi|899608|gb|AAC49025.1| polyubiquitin [Zea mays]
Length = 381
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + VR G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVVR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+V Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVVRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|148687613|gb|EDL19560.1| ubiquitin C, isoform CRA_a [Mus musculus]
gi|148687614|gb|EDL19561.1| ubiquitin C, isoform CRA_a [Mus musculus]
Length = 614
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 132/289 (45%), Gaps = 41/289 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQV-------KTEQSSPSKK--IHLKINIPSNSKTHHH---HHH 108
I + S + L++ Q+ KT + K+ +HL + + +
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTINYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 272
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 273 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 332
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
GM ++ V T G K I +EV SD + ++ ++Q +P
Sbjct: 333 --------LRGGM-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIP 373
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
D I+ ++D R+ +++ + T+ +IF ++TG
Sbjct: 374 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 422
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 337 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 396
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 397 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 436
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 437 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 488
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 489 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 537
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 538 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 574
>gi|443922596|gb|ELU42015.1| polyubiquitin [Rhizoctonia solani AG-1 IA]
Length = 681
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 453 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 512
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 513 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 552
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 553 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 604
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 605 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 653
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
++D R+ +++ + T+ +
Sbjct: 654 LEDGRTLSDYNIQKESTLHL 673
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 529 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 588
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 589 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 628
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 629 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 676
>gi|33323472|gb|AAQ07453.1| ubiquitin [Musa acuminata AAA Group]
Length = 381
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I LK+ + +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLKV-------------------ESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLKVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|197129067|gb|ACH45565.1| putative ubiquitin C variant 12 [Taeniopygia guttata]
Length = 381
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP KQ L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDKQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDKQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|902584|gb|AAC49013.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
Length = 533
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+V Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVVRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLADYNIQKESTL 523
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVVRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528
>gi|302843878|ref|XP_002953480.1| polyubiquitin [Volvox carteri f. nagariensis]
gi|300261239|gb|EFJ45453.1| polyubiquitin [Volvox carteri f. nagariensis]
Length = 305
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|118370596|ref|XP_001018499.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300266|gb|EAR98254.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 228
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+++ DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------VTLDVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +++ ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDIEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTVTLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDIEASDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|146421245|ref|XP_001486573.1| ubiquitin [Meyerozyma guilliermondii ATCC 6260]
gi|146389988|gb|EDK38146.1| ubiquitin [Meyerozyma guilliermondii ATCC 6260]
Length = 457
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|320031616|gb|EFW13576.1| ubiquitin [Coccidioides posadasii str. Silveira]
Length = 625
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 397 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 456
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 457 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 496
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 497 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 548
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 549 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 597
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
++D R+ +++ + T+ +
Sbjct: 598 LEDGRTLSDYNIQKESTLHL 617
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 330 GKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 389
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 390 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKTKIQDK 429
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 430 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 476
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 477 VKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 530
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 531 YNIQKESTLHLVLRLRGGMQIFVKTLTG 558
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 473 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 532
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 533 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 572
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 573 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 620
>gi|281205784|gb|EFA79973.1| ubiquitin [Polysphondylium pallidum PN500]
Length = 306
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQVFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQVFVKTLT--------------GKT------ITLEVEGSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 229 M-----QVFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 278 LEDGRTLSDYNI 289
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQVFVKTLT--------------GKT------ITLEVEGSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QVFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLSDYNI 213
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQVFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQVFVKTLT--------------GKT------ITLEVEGSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|395295|emb|CAA52290.1| polyubiquitin [Volvox carteri f. nagariensis]
Length = 381
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|92790156|emb|CAI83747.1| Polyubiqutin 1 [Isotricha prostoma]
Length = 366
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 62 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 121
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 122 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 161
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R G
Sbjct: 162 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGG 213
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 214 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 262
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D+R+ +++ + T+ +IF ++TG
Sbjct: 263 LEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 299
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 119/257 (46%), Gaps = 49/257 (19%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVK 80
DT+ +K KI+ +GIP +Q L+F G+ L+D+R + I + S + L++ Q+
Sbjct: 6 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIF 65
Query: 81 TEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQ 140
+ + KT + LD++ +DT+ +K KI + E IP ++ +
Sbjct: 66 VKTLT--------------GKT------ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 105
Query: 141 SSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIP 200
+G +L+D+R+L D + + + + +R GM ++ V T G K I
Sbjct: 106 FAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTIT 151
Query: 201 VEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI-- 258
++V SD + ++ ++Q +P D I+ ++D+R+ +++ + T+
Sbjct: 152 LDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 206
Query: 259 --------EIFNGSVTG 267
+IF ++TG
Sbjct: 207 VLRLRGGMQIFVKTLTG 223
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 214 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 273
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 274 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 313
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 314 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 361
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 79/166 (47%), Gaps = 29/166 (17%)
Query: 112 DMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSP 171
D++ +DT+ +K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 1 DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--- 57
Query: 172 TATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDG 231
GM ++ V T G K I ++V SD + ++ ++Q +P D
Sbjct: 58 -----LRGGM-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQ 101
Query: 232 YFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
I+ ++D+R+ +++ + T+ +IF ++TG
Sbjct: 102 QRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 147
>gi|92790146|emb|CAI83742.1| Polyubiquitin 2 [Dasytricha ruminantium]
Length = 354
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 50 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 109
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 110 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 149
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R G
Sbjct: 150 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGG 201
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 202 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 250
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D+R+ +++ + T+ +IF ++TG
Sbjct: 251 LEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 287
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 202 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 261
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 262 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 301
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 302 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 349
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 114/249 (45%), Gaps = 49/249 (19%)
Query: 29 KIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSK 88
KI+ +GIP +Q L+F G+ L+D+R + I + S + L++ Q+ + +
Sbjct: 2 KIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT--- 58
Query: 89 KIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQD 148
KT + LD++ +DT+ +K KI + E IP ++ + +G +L+D
Sbjct: 59 -----------GKT------ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 101
Query: 149 HRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDN 208
+R+L D + + + + +R GM ++ V T G K I ++V SD
Sbjct: 102 NRTLADYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLDVEPSDT 147
Query: 209 VSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI---------- 258
+ ++ ++Q +P D I+ ++D+R+ +++ + T+
Sbjct: 148 IENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGM 202
Query: 259 EIFNGSVTG 267
+IF ++TG
Sbjct: 203 QIFVKTLTG 211
>gi|384493519|gb|EIE84010.1| polyubiquitin [Rhizopus delemar RA 99-880]
Length = 305
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 130/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD++ +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDSIENVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|119500448|ref|XP_001266981.1| polyubiquitin (UbiD), putative [Neosartorya fischeri NRRL 181]
gi|121707680|ref|XP_001271909.1| polyubiquitin (UbiD), putative [Aspergillus clavatus NRRL 1]
gi|119400057|gb|EAW10483.1| polyubiquitin (UbiD), putative [Aspergillus clavatus NRRL 1]
gi|119415146|gb|EAW25084.1| polyubiquitin (UbiD), putative [Neosartorya fischeri NRRL 181]
Length = 305
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|115492305|ref|XP_001210780.1| ubiquitin [Aspergillus terreus NIH2624]
gi|149242950|ref|XP_001526489.1| hypothetical protein LELG_03047 [Lodderomyces elongisporus NRRL
YB-4239]
gi|169771599|ref|XP_001820269.1| ubiquitin [Aspergillus oryzae RIB40]
gi|212542037|ref|XP_002151173.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces marneffei ATCC
18224]
gi|238485820|ref|XP_002374148.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus flavus NRRL3357]
gi|242769894|ref|XP_002341866.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces stipitatus ATCC
10500]
gi|448097159|ref|XP_004198602.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
gi|448111178|ref|XP_004201781.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
gi|83768128|dbj|BAE58267.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|114197640|gb|EAU39340.1| ubiquitin [Aspergillus terreus NIH2624]
gi|146450612|gb|EDK44868.1| hypothetical protein LELG_03047 [Lodderomyces elongisporus NRRL
YB-4239]
gi|210066080|gb|EEA20173.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces marneffei ATCC
18224]
gi|218725062|gb|EED24479.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces stipitatus ATCC
10500]
gi|220699027|gb|EED55366.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus flavus NRRL3357]
gi|359380024|emb|CCE82265.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
gi|359464770|emb|CCE88475.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
gi|391871753|gb|EIT80910.1| ubiquitin and ubiquitin-like protein [Aspergillus oryzae 3.042]
Length = 305
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|357118730|ref|XP_003561103.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin 3-like [Brachypodium
distachyon]
Length = 330
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 21/147 (14%)
Query: 12 AFTIEVGFFDTVLEIKEKI-EKYQGIPVP-KQTLVFNGQVLQDD-RDVEHCEILQNSRIQ 68
A ++V DT+ ++K KI K G PVP +Q LVF G+++++D R +E + + SR+
Sbjct: 81 ALALDVQSSDTIRDVKAKIYHKLPGNPVPSRQRLVFAGKMMEEDGRTLEEYGVKEESRLH 140
Query: 69 LLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHE 128
L V + P + + + PS + + +++++DTV +KEKI +
Sbjct: 141 LAV------------TRPPPPVGVFVRAPSGKRLYLR------ELELSDTVWSVKEKISD 182
Query: 129 MESIPVNRLLVQSSGAELQDHRSLRDC 155
E IP RL V G +L+D +L DC
Sbjct: 183 EERIPPGRLRVVYGGKQLEDGSTLADC 209
>gi|92790182|emb|CAI83760.1| Polyubiqutin 1 [Epidinium ecaudatum]
Length = 378
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 74 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 133
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 134 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 173
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R G
Sbjct: 174 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGG 225
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 226 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 274
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D+R+ +++ + T+ +IF ++TG
Sbjct: 275 LEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 311
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 125/268 (46%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R + I + S + L
Sbjct: 7 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 66
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + LD++ +DT+ +K KI +
Sbjct: 67 VLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIENVKAKIQDK 106
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D+R+L D + + + + +R GM ++
Sbjct: 107 EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 153
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I ++V SD + ++ ++Q +P D I+ ++D+R+
Sbjct: 154 VKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDNRTLAD 207
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 208 YNIQKESTLHLVLRLRGGMQIFVKTLTG 235
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 226 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 285
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 286 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 325
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 326 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 373
>gi|92790148|emb|CAI83743.1| Polyubiqutin 3 [Dasytricha ruminantium]
Length = 363
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 59 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 118
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 119 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 158
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R G
Sbjct: 159 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGG 210
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 211 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 259
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D+R+ +++ + T+ +IF ++TG
Sbjct: 260 LEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 296
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 119/257 (46%), Gaps = 49/257 (19%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVK 80
DT+ +K KI+ +GIP +Q L+F G+ L+D+R + I + S + L++ Q+
Sbjct: 3 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIF 62
Query: 81 TEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQ 140
+ + KT + LD++ +DT+ +K KI + E IP ++ +
Sbjct: 63 VKTLT--------------GKT------ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 102
Query: 141 SSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIP 200
+G +L+D+R+L D + + + + +R GM ++ V T G K I
Sbjct: 103 FAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTIT 148
Query: 201 VEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI-- 258
++V SD + ++ ++Q +P D I+ ++D+R+ +++ + T+
Sbjct: 149 LDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 203
Query: 259 --------EIFNGSVTG 267
+IF ++TG
Sbjct: 204 VLRLRGGMQIFVKTLTG 220
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 211 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 270
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 271 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 310
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 311 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 358
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 116 NDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATS 175
+DT+ +K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 2 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR------- 54
Query: 176 TTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFI 235
GM ++ V T G K I ++V SD + ++ ++Q +P D I
Sbjct: 55 -LRGGM-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLI 102
Query: 236 YKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+ ++D+R+ +++ + T+ +IF ++TG
Sbjct: 103 FAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 144
>gi|169607224|ref|XP_001797032.1| hypothetical protein SNOG_06667 [Phaeosphaeria nodorum SN15]
gi|111065378|gb|EAT86498.1| hypothetical protein SNOG_06667 [Phaeosphaeria nodorum SN15]
Length = 234
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|6322989|ref|NP_013061.1| ubiquitin [Saccharomyces cerevisiae S288c]
gi|260940391|ref|XP_002614495.1| ubiquitin [Clavispora lusitaniae ATCC 42720]
gi|302595956|sp|P0CG63.1|UBI4P_YEAST RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|4734|emb|CAA29198.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1360231|emb|CAA97489.1| UBI4 [Saccharomyces cerevisiae]
gi|151941132|gb|EDN59510.1| poly-ubiquitin [Saccharomyces cerevisiae YJM789]
gi|190406010|gb|EDV09277.1| hypothetical protein SCRG_04952 [Saccharomyces cerevisiae RM11-1a]
gi|238851681|gb|EEQ41145.1| ubiquitin [Clavispora lusitaniae ATCC 42720]
gi|259147952|emb|CAY81201.1| Ubi4p [Saccharomyces cerevisiae EC1118]
gi|285813387|tpg|DAA09283.1| TPA: ubiquitin [Saccharomyces cerevisiae S288c]
gi|323336529|gb|EGA77795.1| Ubi4p [Saccharomyces cerevisiae Vin13]
gi|349579690|dbj|GAA24851.1| K7_Ubi4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 381
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|302393784|sp|P69315.2|UBIQP_LINUS RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|168304|gb|AAA33401.1| ubiquitin, partial [Linum usitatissimum]
Length = 305
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 42 MQIFLKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 101
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 102 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 141
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 142 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 193
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 194 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 242
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 243 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 279
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 118 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 177
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 178 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 217
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 218 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 269
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 270 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 300
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 49/242 (20%)
Query: 36 IPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKIN 95
IP +Q L+F G+ L+D R + I + S + L++ Q I LK
Sbjct: 1 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ-----------IFLK-- 47
Query: 96 IPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDC 155
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D
Sbjct: 48 -TLTGKT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 100
Query: 156 ELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
+ + + + +R GM ++ V T G K I +EV +SD + ++ +
Sbjct: 101 NIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKAK 146
Query: 216 LQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSV 265
+Q +P D I+ ++D R+ +++ + T+ +IF ++
Sbjct: 147 IQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 201
Query: 266 TG 267
TG
Sbjct: 202 TG 203
>gi|357474765|ref|XP_003607668.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
gi|355508723|gb|AES89865.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
Length = 497
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 220 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 279
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 280 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 319
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 320 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 371
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 372 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 420
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 421 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 457
>gi|302143601|emb|CBI22354.3| unnamed protein product [Vitis vinifera]
Length = 771
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 42 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 101
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 102 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 141
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 142 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 193
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 194 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 242
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 243 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 279
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 410 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 469
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 470 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 509
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 510 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 561
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 562 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 610
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 611 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 647
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 136/328 (41%), Gaps = 87/328 (26%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 194 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 253
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 254 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 293
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR------------ 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 294 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDPMDVKND 353
Query: 169 --PSPTA-TSTT------------------------------------SSGMGPRKLKLL 189
PSP TSTT + + P K+++
Sbjct: 354 FLPSPNLPTSTTINIKYFLSSHHSKRLCGLPEKQSSFLCLFIDHSLFPNRSLFPFKMQIF 413
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 414 VKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLAD 467
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 468 YNIQKESTLHLVLRLRGGMQIFVKTLTG 495
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 562 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 621
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 622 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 661
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 662 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 709
>gi|255732802|ref|XP_002551324.1| ubiquitin [Candida tropicalis MYA-3404]
gi|240131065|gb|EER30626.1| ubiquitin [Candida tropicalis MYA-3404]
Length = 299
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 115/254 (45%), Gaps = 39/254 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQ 254
++D R+ +++ +
Sbjct: 278 LEDGRTLSDYNISK 291
>gi|213401917|ref|XP_002171731.1| ubiquitin [Schizosaccharomyces japonicus yFS275]
gi|211999778|gb|EEB05438.1| ubiquitin [Schizosaccharomyces japonicus yFS275]
Length = 382
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|156841217|ref|XP_001643983.1| hypothetical protein Kpol_1070p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114615|gb|EDO16125.1| hypothetical protein Kpol_1070p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 533
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|241953793|ref|XP_002419618.1| ubiquitin, putative [Candida dubliniensis CD36]
gi|302595951|sp|P0CG74.1|UBI4P_CANAL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|2437825|emb|CAA90901.1| polyubiquitin [Candida albicans]
gi|223642958|emb|CAX43214.1| ubiquitin, putative [Candida dubliniensis CD36]
Length = 305
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|92790160|emb|CAI83749.1| Polyubiqutin 3 [Isotricha prostoma]
Length = 374
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 70 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 129
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 130 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 169
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R G
Sbjct: 170 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGG 221
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 222 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 270
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D+R+ +++ + T+ +IF ++TG
Sbjct: 271 LEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 307
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 125/268 (46%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R + I + S + L
Sbjct: 3 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + LD++ +DT+ +K KI +
Sbjct: 63 VLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIENVKAKIQDK 102
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D+R+L D + + + + +R GM ++
Sbjct: 103 EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 149
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I ++V SD + ++ ++Q +P D I+ ++D+R+
Sbjct: 150 VKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDNRTLAD 203
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 204 YNIQKESTLHLVLRLRGGMQIFVKTLTG 231
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 222 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 281
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 282 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 321
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 322 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 369
>gi|55783587|gb|AAV65292.1| polyubiquitin [Aspergillus fumigatus]
Length = 304
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|387916118|gb|AFK11668.1| polyubiquitin-like protein [Callorhinchus milii]
Length = 381
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFVGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP+++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPLDQQCLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFVGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP+ +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPLDQQCLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|114159828|gb|ABI53721.1| polyubiquitin [Pyropia yezoensis]
Length = 457
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|50286405|ref|XP_445631.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524936|emb|CAG58542.1| unnamed protein product [Candida glabrata]
Length = 533
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|366992347|ref|XP_003675939.1| hypothetical protein NCAS_0C05850 [Naumovozyma castellii CBS 4309]
gi|342301804|emb|CCC69575.1| hypothetical protein NCAS_0C05850 [Naumovozyma castellii CBS 4309]
Length = 388
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|295661227|ref|XP_002791169.1| ubiquitin [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281096|gb|EEH36662.1| ubiquitin [Paracoccidioides sp. 'lutzii' Pb01]
Length = 305
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLSDYNIQKESTL 295
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESGDTIDGVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|374717833|gb|AEZ66647.1| putative beta-1,6-glucanase [Wickerhamomyces anomalus]
gi|374717835|gb|AEZ66648.1| putative beta-1,6-glucanase [Wickerhamomyces anomalus]
Length = 381
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|340375318|ref|XP_003386183.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
Length = 968
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 122/260 (46%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + +P G++ ++EV DTV +KEKI+ +GIP +Q L+F G+ L++ R +
Sbjct: 1 MRISIKPLVGESLSLEVEASDTVESVKEKIQDKEGIPPDQQRLIFVGKQLENGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQNESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTME 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NIKAKIQDKEGIPPDQQRLIFAGRQLEDGRTLSDYNIQKESTLHLVLR--------RRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+ +
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKI 201
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
++D R+ +++ + T+ +
Sbjct: 202 LEDGRTLSDYNIQKESTLHL 221
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 117/261 (44%), Gaps = 37/261 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G++L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKILEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ + I +KI I + + + L ++ ++T+
Sbjct: 213 IQKESTLHLVLCFRH-----------DMLIFVKIWIGNET-----GKIIFLQVEPSNTIE 256
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQD-HRSLRDCELMDNAEIDVHVRPSPTATSTTSS 179
+K KI + E IP ++ + +G +L++ H +L D + + +D+
Sbjct: 257 NVKAKIQDKERIPPDQQKLIFAGKQLENGHYTLLDYGIQRESTLDL-------------- 302
Query: 180 GMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQN 239
+ P + + + GN V +N+ N+ ++ +++ ++P D +
Sbjct: 303 -LLPDHMIINIKEVDGNVVTDVIINSYRNIGYIKADIKS-----KTNIPYDEQRLTFAGK 356
Query: 240 VMDDDRSFRWHHVGQGDTIEI 260
+ R+F + + GDT+ +
Sbjct: 357 QLSFGRTFSHYKIKDGDTLHL 377
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 30/253 (11%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
G IEV DT+ ++K IE + I QTL + GQ+L D + +I S + L
Sbjct: 472 GNIIVIEVLPTDTISDLKRMIEDKERISPTDQTLFYAGQLLDDASTLASYDIPMESVLDL 531
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
+ S+ +P+ I++K KT L++ +T+ +K KI E
Sbjct: 532 FIRSN---------PNPNMTIYVKT---LTGKTFE------LNVIYCNTIGNVKTKIEET 573
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAE--IDVHVRPSPTATSTTSSGMGPRKLK 187
IP N+ + G +L+D + D L + + D ++ T ++
Sbjct: 574 GGIPCNQQKIIYDGRQLEDDY-IEDTLLPNKIKTLFDHGIKDKSTLHLLLRLRG---GMQ 629
Query: 188 LLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSF 247
+ V T G + I +EV SD + ++ ++Q +P D I+ V+ DDR+
Sbjct: 630 IFVKTLTG-RTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKVLVDDRTL 683
Query: 248 RWHHVGQGDTIEI 260
+++ DTI++
Sbjct: 684 SDYNIKTKDTIDL 696
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK F + V + +T+ +K KIE+ GIP +Q ++++G+ L+DD +E +
Sbjct: 541 MTIYVKTLTGKTFELNVIYCNTIGNVKTKIEETGGIPCNQQKIIYDGRQLEDDY-IE--D 597
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
L ++I+ L K + T + ++I + + + + L+++ +DT+
Sbjct: 598 TLLPNKIKTLFDHGIKDK-STLHLLLRLRGGMQIFVKTLT-----GRTITLEVEPSDTIE 651
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVH 166
+K KI + E IP ++ + +G L D R+L D + ID+
Sbjct: 652 NVKAKIQDKEGIPPDQQRLIFAGKVLVDDRTLSDYNIKTKDTIDLQ 697
>gi|320580936|gb|EFW95158.1| Ubiquitin C variant [Ogataea parapolymorpha DL-1]
Length = 761
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + + E+Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVESSDTIDNVESEIQDKE-----GIPPDQRRLIFAGMQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ ++ +I+ +GIP ++ L+F G L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVESSDTIDNVESEIQDKEGIPPDQRRLIFAGMQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
>gi|297812245|ref|XP_002874006.1| hypothetical protein ARALYDRAFT_488966 [Arabidopsis lyrata subsp.
lyrata]
gi|297319843|gb|EFH50265.1| hypothetical protein ARALYDRAFT_488966 [Arabidopsis lyrata subsp.
lyrata]
Length = 382
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQVFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|114159830|gb|ABI53722.1| polyubiquitin [Pyropia yezoensis]
Length = 533
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKLKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|2760349|gb|AAB95252.1| ubiquitin [Arabidopsis thaliana]
Length = 380
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQWLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ + + + T+
Sbjct: 354 LEDGRTLADYDIQKESTL 371
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D ++ + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYDIQKESTLHLVLR 376
>gi|92790144|emb|CAI83741.1| Polyubiqutin 1 [Dasytricha ruminantium]
gi|92790150|emb|CAI83744.1| Polyubiqutin 4 [Dasytricha ruminantium]
gi|92790154|emb|CAI83746.1| Polyubiqutin 2 [Isotricha intestinalis]
gi|92790158|emb|CAI83748.1| Polyubiqutin 2 [Isotricha prostoma]
Length = 379
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 75 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 134
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 135 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 174
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R G
Sbjct: 175 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGG 226
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 227 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 275
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D+R+ +++ + T+ +IF ++TG
Sbjct: 276 LEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 312
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 125/268 (46%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R + I + S + L
Sbjct: 8 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 67
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + LD++ +DT+ +K KI +
Sbjct: 68 VLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIENVKAKIQDK 107
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D+R+L D + + + + +R GM ++
Sbjct: 108 EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 154
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I ++V SD + ++ ++Q +P D I+ ++D+R+
Sbjct: 155 VKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDNRTLAD 208
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 209 YNIQKESTLHLVLRLRGGMQIFVKTLTG 236
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 227 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 286
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 287 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 326
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 327 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 374
>gi|440638790|gb|ELR08709.1| polyubiquitin [Geomyces destructans 20631-21]
Length = 381
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|224069394|ref|XP_002326346.1| predicted protein [Populus trichocarpa]
gi|222833539|gb|EEE72016.1| predicted protein [Populus trichocarpa]
Length = 306
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + N+ T L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVK------------TLTGNTIT--------LEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLADYNIQKESTL 295
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVENSDTIDNVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T GN I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTGNT-ITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + G T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGNTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|50423807|ref|XP_460488.1| DEHA2F02816p [Debaryomyces hansenii CBS767]
gi|210076178|ref|XP_504128.2| YALI0E18986p [Yarrowia lipolytica]
gi|49656157|emb|CAG88798.1| DEHA2F02816p [Debaryomyces hansenii CBS767]
gi|199426939|emb|CAG79723.2| YALI0E18986p [Yarrowia lipolytica CLIB122]
gi|392574761|gb|EIW67896.1| hypothetical protein TREMEDRAFT_44902 [Tremella mesenterica DSM
1558]
Length = 457
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|296420280|ref|XP_002839703.1| hypothetical protein [Tuber melanosporum Mel28]
gi|13345367|gb|AAK19308.1| polyubiquitin [Tuber borchii]
gi|295635897|emb|CAZ83894.1| unnamed protein product [Tuber melanosporum]
Length = 306
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|330805887|ref|XP_003290908.1| ubiquitin [Dictyostelium purpureum]
gi|325078946|gb|EGC32571.1| ubiquitin [Dictyostelium purpureum]
Length = 229
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLSDYNI 213
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|261205776|ref|XP_002627625.1| ubiquitin [Ajellomyces dermatitidis SLH14081]
gi|239592684|gb|EEQ75265.1| ubiquitin [Ajellomyces dermatitidis SLH14081]
Length = 381
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|19112201|ref|NP_595409.1| ubiquitin [Schizosaccharomyces pombe 972h-]
gi|302595955|sp|P0CG72.1|UBI4P_SCHPO RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|3738185|emb|CAA21278.1| ubiquitin [Schizosaccharomyces pombe]
Length = 382
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|116202449|ref|XP_001227036.1| polyubiquitin [Chaetomium globosum CBS 148.51]
gi|126139705|ref|XP_001386375.1| hypothetical protein PICST_73878 [Scheffersomyces stipitis CBS
6054]
gi|255948832|ref|XP_002565183.1| Pc22g12390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|367040177|ref|XP_003650469.1| hypothetical protein THITE_2072392 [Thielavia terrestris NRRL 8126]
gi|389633097|ref|XP_003714201.1| polyubiquitin [Magnaporthe oryzae 70-15]
gi|2894304|emb|CAA11267.1| polyubiquitin [Nicotiana tabacum]
gi|3334645|emb|CAA07773.1| polyubiquitin [Gibberella pulicaris]
gi|88177627|gb|EAQ85095.1| polyubiquitin [Chaetomium globosum CBS 148.51]
gi|88766393|gb|ABD49716.1| polyubiquitin [Metarhizium anisopliae]
gi|126093657|gb|ABN68346.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|211592200|emb|CAP98527.1| Pc22g12390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|310800960|gb|EFQ35853.1| ubiquitin family protein [Glomerella graminicola M1.001]
gi|322711004|gb|EFZ02578.1| ubiquitin [Metarhizium anisopliae ARSEF 23]
gi|340516961|gb|EGR47207.1| polyubiquitin [Trichoderma reesei QM6a]
gi|346997730|gb|AEO64133.1| hypothetical protein THITE_2072392 [Thielavia terrestris NRRL 8126]
gi|351646534|gb|EHA54394.1| polyubiquitin [Magnaporthe oryzae 70-15]
gi|358386330|gb|EHK23926.1| hypothetical protein TRIVIDRAFT_215920 [Trichoderma virens Gv29-8]
gi|361129858|gb|EHL01740.1| putative Polyubiquitin [Glarea lozoyensis 74030]
gi|378733143|gb|EHY59602.1| polyubiquitin [Exophiala dermatitidis NIH/UT8656]
gi|402085157|gb|EJT80055.1| polyubiquitin [Gaeumannomyces graminis var. tritici R3-111a-1]
gi|406701275|gb|EKD04425.1| hypothetical protein A1Q2_01309 [Trichosporon asahii var. asahii
CBS 8904]
gi|406867327|gb|EKD20365.1| ubiquitin [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
gi|407920052|gb|EKG13270.1| Ubiquitin [Macrophomina phaseolina MS6]
gi|453085016|gb|EMF13059.1| ubiquitin [Mycosphaerella populorum SO2202]
Length = 305
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|342298464|emb|CBY46746.1| polyubiquitin 10 protein [Lepidium campestre]
Length = 381
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DTV +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|302918054|ref|XP_003052575.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733515|gb|EEU46862.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 305
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|374412404|gb|AEZ49160.1| polyubiquitin, partial [Wolffia australiana]
Length = 281
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 21 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 80
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 81 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 120
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 121 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 172
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 173 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 221
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 222 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 258
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 97 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 156
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 157 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 196
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 197 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 248
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 249 M-----QIFVKTLTG-KTITLEVASSDTIDNVKAKIQ 279
>gi|124377852|tpd|FAA00316.1| TPA: polyubiquitin [Eremothecium gossypii]
gi|124377856|tpd|FAA00318.1| TPA: polyubiquitin [Saccharomyces paradoxus NRRL Y-17217]
Length = 380
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|3776536|gb|AAC64787.1| polyubiquitin [Schizosaccharomyces pombe]
Length = 610
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|45185626|ref|NP_983342.1| ACL062Cp [Ashbya gossypii ATCC 10895]
gi|44981344|gb|AAS51166.1| ACL062Cp [Ashbya gossypii ATCC 10895]
gi|374106548|gb|AEY95457.1| FACL062Cp [Ashbya gossypii FDAG1]
Length = 382
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|328864943|gb|EGG13329.1| hypothetical protein DFA_11090 [Dictyostelium fasciculatum]
Length = 356
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 31/199 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHL--------------KINIPSNSKTHH 104
I + S + L++ Q VKT P + L NI S H
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 272
Query: 105 ---------------HHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDH 149
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D
Sbjct: 273 VLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDG 332
Query: 150 RSLRDCELMDNAEIDVHVR 168
R+L D + + + + +R
Sbjct: 333 RTLSDYNIQKESTLHLVLR 351
>gi|68472143|ref|XP_719867.1| hypothetical protein CaO19.6771 [Candida albicans SC5314]
gi|68472378|ref|XP_719750.1| hypothetical protein CaO19.14063 [Candida albicans SC5314]
gi|3687425|emb|CAA76783.1| polyubiquitin [Candida albicans]
gi|46441582|gb|EAL00878.1| hypothetical protein CaO19.14063 [Candida albicans SC5314]
gi|46441708|gb|EAL01003.1| hypothetical protein CaO19.6771 [Candida albicans SC5314]
gi|238881109|gb|EEQ44747.1| hypothetical protein CAWG_03035 [Candida albicans WO-1]
gi|354545623|emb|CCE42351.1| hypothetical protein CPAR2_809000 [Candida parapsilosis]
Length = 229
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|406606462|emb|CCH42236.1| ubiquitin C [Wickerhamomyces ciferrii]
Length = 383
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|260600300|gb|ACX46987.1| ubiquitin [Guzmania wittmackii x Guzmania lingulata]
Length = 441
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P + I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPEQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 381 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 411
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQD 148
+K KI + E IP ++ + +G +L+D
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLED 432
>gi|192910770|gb|ACF06493.1| UBQ4 [Elaeis guineensis]
Length = 384
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----------- 149
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
MG +++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 150 MGG--MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|50307963|ref|XP_453980.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|302595952|sp|P0CG75.1|UBI4P_KLULA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|5531273|emb|CAB50898.1| polyubiquitin [Kluyveromyces lactis]
gi|49643115|emb|CAG99067.1| KLLA0E00749p [Kluyveromyces lactis]
Length = 381
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|104303708|gb|ABF66639.1| ubiquitin [Pelophylax nigromaculatus]
Length = 305
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|254585537|ref|XP_002498336.1| ZYRO0G07854p [Zygosaccharomyces rouxii]
gi|238941230|emb|CAR29403.1| ZYRO0G07854p [Zygosaccharomyces rouxii]
Length = 460
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|225558948|gb|EEH07231.1| ubiquitin [Ajellomyces capsulatus G186AR]
gi|240281869|gb|EER45372.1| polyubiquitin [Ajellomyces capsulatus H143]
gi|325088005|gb|EGC41315.1| polyubiquitin [Ajellomyces capsulatus H88]
Length = 305
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLSDYNIQKESTL 295
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|365764258|gb|EHN05782.1| Ubi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|452984043|gb|EME83800.1| hypothetical protein MYCFIDRAFT_60610 [Pseudocercospora fijiensis
CIRAD86]
Length = 229
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|281208308|gb|EFA82486.1| ubiquitin [Polysphondylium pallidum PN500]
Length = 443
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 139 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 198
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 199 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 238
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 239 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 290
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 291 M-----QIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 339
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 340 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 376
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 71/319 (22%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHLKINIP-------------SNSKTHHH 105
I + S + L++ Q VKT I K IP + +T
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 120
Query: 106 HH-------HL--------------------PLDMDVNDTVLRLKEKIHEMESIPVNRLL 138
++ HL L+++ +DT+ +K KI + E IP ++
Sbjct: 121 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQR 180
Query: 139 VQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKR 198
+ +G +L+D R+L D + + + + +R GM ++ V T G K
Sbjct: 181 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KT 226
Query: 199 IPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
I +EV SD + ++ ++Q +P D I+ ++D R+ +++ + T+
Sbjct: 227 ITLEVEGSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 281
Query: 259 ----------EIFNGSVTG 267
+IF ++TG
Sbjct: 282 HLVLRLRGGMQIFVKTLTG 300
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 291 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 351 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 390
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 391 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 438
>gi|254574192|ref|XP_002494205.1| Ubiquitin [Komagataella pastoris GS115]
gi|238034004|emb|CAY72026.1| Ubiquitin [Komagataella pastoris GS115]
Length = 310
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|328353975|emb|CCA40372.1| Ubiquitin cross-reactive protein [Komagataella pastoris CBS 7435]
Length = 386
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|321263887|ref|XP_003196661.1| ATP-dependent protein binding protein [Cryptococcus gattii WM276]
gi|317463138|gb|ADV24874.1| ATP-dependent protein binding protein, putative [Cryptococcus
gattii WM276]
Length = 381
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|425774856|gb|EKV13151.1| hypothetical protein PDIG_39650 [Penicillium digitatum PHI26]
Length = 309
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 81 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 141 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 180
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 181 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 232
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 233 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 281
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 282 LEDGRTLSDYNIQKESTL 299
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 14 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 73
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 74 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKSKIQDK 113
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 114 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 160
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 161 VKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 214
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 215 YNIQKESTLHLVLRLRGGMQIFVKTLTG 242
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 157 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 217 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 256
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 257 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 304
>gi|403413175|emb|CCL99875.1| predicted protein [Fibroporia radiculosa]
Length = 312
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 8 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 67
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 68 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 107
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 108 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 159
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 160 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 208
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 209 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 245
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 160 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 220 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 259
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 260 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 307
>gi|312160|emb|CAA51679.1| ubiquitin [Solanum lycopersicum]
Length = 534
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------RKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLADYNIQKESTL 523
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528
>gi|336385317|gb|EGO26464.1| hypothetical protein SERLADRAFT_368035 [Serpula lacrymans var.
lacrymans S7.9]
gi|392571572|gb|EIW64744.1| ubiquitin [Trametes versicolor FP-101664 SS1]
gi|395334250|gb|EJF66626.1| ubiquitin [Dichomitus squalens LYAD-421 SS1]
gi|403414247|emb|CCM00947.1| predicted protein [Fibroporia radiculosa]
Length = 381
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|393245214|gb|EJD52725.1| ubiquitin [Auricularia delicata TFB-10046 SS5]
Length = 305
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|221122833|ref|XP_002155023.1| PREDICTED: polyubiquitin-C, partial [Hydra magnipapillata]
Length = 530
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 122/258 (47%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K +I+ +G +Q L+F G+ L+DDR + +
Sbjct: 300 MQIFVKTLTGKTITLEVELADTIENVKARIQDKKGFLPDQQRLIFAGKELEDDRTLSYYN 359
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
+ + S + L++ ++ +NI + T + L+++ DT+
Sbjct: 360 VQKESTLHLVL-----------------RLRGSMNIFVKTLT---GKTITLEVEPADTID 399
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KIH+ E +P+++ + +G EL++ R+L D + +D+ +R
Sbjct: 400 NVKAKIHDKEGVPLDQQSLFFAGKELENERTLSDYNIQKKYTLDLFLRIE---------- 449
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
G ++ + LT+ K I +EVN ++ ++ ++ ++ + LP D + +
Sbjct: 450 -GGMRINVKTLTR---KIITLEVNPANTINNIKAKISDM----DCILP-DQHVLTFNGQQ 500
Query: 241 MDDDRSFRWHHVGQGDTI 258
+D++RS +++ T+
Sbjct: 501 LDNERSLSSYNIESESTL 518
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 40/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +G +Q L+F G+ L+DDR + +
Sbjct: 149 MKIFVKTLTGKTITLEVEPADTIENVKAKIQDKEGFLPDQQRLIFAGKELEDDRTLSYYN 208
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
+ + S + L++ Q+ ++ K L++ P+N T+
Sbjct: 209 VQKESTLHLVLRLRGGMQIFV-KTLTGKTFTLEVE-PAN------------------TID 248
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E +P ++ + G L+D +L DC + + + + +R G
Sbjct: 249 EVKAKICDKEGVPPDQQRLIFHGILLEDA-TLSDCNVQKKSVLQLVLR--------LRGG 299
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +D + ++ +Q + F LP D I+
Sbjct: 300 M-----QIFVKTLTG-KTITLEVELADTIENVKARIQ---DKKGF-LP-DQQRLIFAGKE 348
Query: 241 MDDDRSFRWHHVGQGDTI 258
++DDR+ +++V + T+
Sbjct: 349 LEDDRTLSYYNVQKESTL 366
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 53/279 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + E Q K T+EV DT+ K KI+ +GIP Q L+F + L+D R +
Sbjct: 1 MQIFAETQCYKIMTLEVEPADTIK--KAKIQDKEGIPPAYQHLIFANKKLEDGRTLVDYN 58
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I +NS + L+ + +KT S KI + L+++ +T+
Sbjct: 59 IQKNSCLYLVEVGIGQIHIKTLTS----KI------------------ISLEVERINTIE 96
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+KE I E +P ++ + +G L+D R+L D ++ + + +R
Sbjct: 97 DVKENIKVREGVPPDQQRLFFAGNILKDERTLSDYNILKESILQHVLRLEG--------- 147
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
+K+ V T G K I +EV +D + ++ ++Q + F LP D I+
Sbjct: 148 ----DMKIFVKTLTG-KTITLEVEPADTIENVKAKIQ---DKEGF-LP-DQQRLIFAGKE 197
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTGGS 269
++DDR+ +++V + T+ +IF ++TG +
Sbjct: 198 LEDDRTLSYYNVQKESTLHLVLRLRGGMQIFVKTLTGKT 236
>gi|392597236|gb|EIW86558.1| polyubiquitin [Coniophora puteana RWD-64-598 SS2]
Length = 305
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|357512381|ref|XP_003626479.1| Ubiquitin-like protein [Medicago truncatula]
gi|355501494|gb|AES82697.1| Ubiquitin-like protein [Medicago truncatula]
Length = 277
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 49 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 108
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 109 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 148
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 149 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 200
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 201 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 249
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
++D R+ +++ + T+ +
Sbjct: 250 LEDGRTLADYNIQKESTLHL 269
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 125 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 184
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 185 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 224
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 225 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 272
>gi|239611163|gb|EEQ88150.1| ubiquitin [Ajellomyces dermatitidis ER-3]
Length = 305
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLSDYNIQKESTL 295
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|154312178|ref|XP_001555417.1| polyubiquitin [Botryotinia fuckeliana B05.10]
gi|171682222|ref|XP_001906054.1| hypothetical protein [Podospora anserina S mat+]
gi|3091264|gb|AAC15225.1| polyubiquitin [Botryotinia fuckeliana]
gi|170941070|emb|CAP66720.1| unnamed protein product [Podospora anserina S mat+]
gi|345566606|gb|EGX49548.1| hypothetical protein AOL_s00078g37 [Arthrobotrys oligospora ATCC
24927]
gi|347836850|emb|CCD51422.1| similar to polyubiquitin protein [Botryotinia fuckeliana]
gi|393248123|gb|EJD55630.1| ubiquitin [Auricularia delicata TFB-10046 SS5]
gi|409051494|gb|EKM60970.1| hypothetical protein PHACADRAFT_247222 [Phanerochaete carnosa
HHB-10118-sp]
Length = 305
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|225465625|ref|XP_002267452.1| PREDICTED: polyubiquitin 4-like isoform 1 [Vitis vinifera]
gi|359488113|ref|XP_003633702.1| PREDICTED: polyubiquitin 4-like isoform 2 [Vitis vinifera]
Length = 386
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|118370602|ref|XP_001018502.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300269|gb|EAR98257.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 228
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+++ DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------VTLDVEATDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVESSDTIENIKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ IK KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTVTLDVEATDTIENIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|384496533|gb|EIE87024.1| polyubiquitin [Rhizopus delemar RA 99-880]
Length = 229
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 123/258 (47%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD++ +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDSIENVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|343485991|dbj|BAK61751.1| ubiquitin [Sphaerozoum punctatum]
Length = 228
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 120/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ ++ KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTISNVEAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIS 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V +SD +S ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVESSDTISNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIS 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|297840967|ref|XP_002888365.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|297334206|gb|EFH64624.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
Length = 458
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEIESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|124377858|tpd|FAA00319.1| TPA: polyubiquitin [Cryptococcus neoformans var. neoformans
B-3501A]
Length = 456
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|169844322|ref|XP_001828882.1| ubiquitin C [Coprinopsis cinerea okayama7#130]
gi|170084089|ref|XP_001873268.1| ubiquitin [Laccaria bicolor S238N-H82]
gi|302695715|ref|XP_003037536.1| hypothetical protein SCHCODRAFT_64979 [Schizophyllum commune H4-8]
gi|116509994|gb|EAU92889.1| ubiquitin C [Coprinopsis cinerea okayama7#130]
gi|164650820|gb|EDR15060.1| ubiquitin [Laccaria bicolor S238N-H82]
gi|300111233|gb|EFJ02634.1| hypothetical protein SCHCODRAFT_64979 [Schizophyllum commune H4-8]
gi|336385372|gb|EGO26519.1| hypothetical protein SERLADRAFT_385284 [Serpula lacrymans var.
lacrymans S7.9]
gi|390604125|gb|EIN13516.1| ubiquitin [Punctularia strigosozonata HHB-11173 SS5]
gi|409083376|gb|EKM83733.1| hypothetical protein AGABI1DRAFT_81473 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201575|gb|EKV51498.1| ubiquitin [Agaricus bisporus var. bisporus H97]
gi|443894847|dbj|GAC72194.1| ubiquitin and ubiquitin-like proteins [Pseudozyma antarctica T-34]
Length = 305
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|46128781|ref|XP_388944.1| hypothetical protein FG08768.1 [Gibberella zeae PH-1]
gi|189190970|ref|XP_001931824.1| ubiquitin [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330938030|ref|XP_003305664.1| hypothetical protein PTT_18575 [Pyrenophora teres f. teres 0-1]
gi|398405616|ref|XP_003854274.1| hypothetical protein MYCGRDRAFT_57170 [Zymoseptoria tritici IPO323]
gi|187973430|gb|EDU40929.1| ubiquitin [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311317170|gb|EFQ86204.1| hypothetical protein PTT_18575 [Pyrenophora teres f. teres 0-1]
gi|339474157|gb|EGP89250.1| hypothetical protein MYCGRDRAFT_57170 [Zymoseptoria tritici IPO323]
gi|344301515|gb|EGW31827.1| polyubiquitin [Spathaspora passalidarum NRRL Y-27907]
gi|346970979|gb|EGY14431.1| ubiquitin [Verticillium dahliae VdLs.17]
gi|358394958|gb|EHK44351.1| hypothetical protein TRIATDRAFT_300588 [Trichoderma atroviride IMI
206040]
gi|401882407|gb|EJT46666.1| hypothetical protein A1Q1_04737 [Trichosporon asahii var. asahii
CBS 2479]
gi|408390396|gb|EKJ69797.1| hypothetical protein FPSE_10045 [Fusarium pseudograminearum CS3096]
gi|429860337|gb|ELA35078.1| ubiquitin [Colletotrichum gloeosporioides Nara gc5]
gi|449302308|gb|EMC98317.1| hypothetical protein BAUCODRAFT_32336 [Baudoinia compniacensis UAMH
10762]
gi|452843190|gb|EME45125.1| hypothetical protein DOTSEDRAFT_70987 [Dothistroma septosporum
NZE10]
Length = 229
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|413926507|gb|AFW66439.1| putative ubiquitin family protein [Zea mays]
Length = 297
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 34/207 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASD 207
M ++ V T G K I +EV +SD
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSD 249
>gi|365986434|ref|XP_003670049.1| hypothetical protein NDAI_0D04930 [Naumovozyma dairenensis CBS 421]
gi|410082970|ref|XP_003959063.1| hypothetical protein KAFR_0I01470 [Kazachstania africana CBS 2517]
gi|444321755|ref|XP_004181533.1| hypothetical protein TBLA_0G00670 [Tetrapisispora blattae CBS 6284]
gi|343768818|emb|CCD24806.1| hypothetical protein NDAI_0D04930 [Naumovozyma dairenensis CBS 421]
gi|372465653|emb|CCF59928.1| hypothetical protein KAFR_0I01470 [Kazachstania africana CBS 2517]
gi|387514578|emb|CCH62014.1| hypothetical protein TBLA_0G00670 [Tetrapisispora blattae CBS 6284]
Length = 229
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|326495764|dbj|BAJ85978.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509329|dbj|BAJ91581.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|3789942|gb|AAC67552.1| polyubiquitin [Saccharum hybrid cultivar H32-8560]
Length = 381
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRXIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLAXYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAXYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ +G +L+D R+L + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRXIFAGKQLEDGRTLAXYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q +F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRXIFAGKQLEDGRTLAXYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|18420267|ref|NP_568397.1| polyubiquitin 4 [Arabidopsis thaliana]
gi|297826781|ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp.
lyrata]
gi|302595977|sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|17678|emb|CAA31331.1| unnamed protein product [Arabidopsis thaliana]
gi|987519|gb|AAB53929.1| polyubiquitin [Arabidopsis thaliana]
gi|297327112|gb|EFH57532.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp.
lyrata]
gi|332005484|gb|AED92867.1| polyubiquitin 4 [Arabidopsis thaliana]
gi|226499|prf||1515347A poly-ubiquitin
Length = 382
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|330790588|ref|XP_003283378.1| ubiquitin [Dictyostelium purpureum]
gi|325086643|gb|EGC40029.1| ubiquitin [Dictyostelium purpureum]
gi|328867190|gb|EGG15573.1| ubiquitin [Dictyostelium fasciculatum]
Length = 381
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 354 LEDGRTLSDYNI 365
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|330805713|ref|XP_003290823.1| hypothetical protein DICPUDRAFT_92560 [Dictyostelium purpureum]
gi|325079033|gb|EGC32654.1| hypothetical protein DICPUDRAFT_92560 [Dictyostelium purpureum]
Length = 229
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLSDYNI 213
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|402220063|gb|EJU00136.1| ubiquitin [Dacryopinax sp. DJM-731 SS1]
Length = 381
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|92790184|emb|CAI83761.1| Polyubiqutin 2 [Epidinium ecaudatum]
Length = 322
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 18 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 77
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 78 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 117
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R G
Sbjct: 118 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGG 169
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 170 M-----QIFVKTFTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 218
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D+R+ +++ + T+ +IF ++TG
Sbjct: 219 LEDNRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 255
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 170 MQIFVKTFTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 229
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 230 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 269
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 270 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 317
>gi|15234698|ref|NP_192436.1| ubiquitin family protein [Arabidopsis thaliana]
gi|7267287|emb|CAB81069.1| putative protein (ubiquitin like) [Arabidopsis thaliana]
gi|332657098|gb|AEE82498.1| ubiquitin family protein [Arabidopsis thaliana]
Length = 129
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 13/95 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQV-LQDDRDVEHC 59
M + E G +F +EV + DT+L +K+KIE+ Q IPV KQTL+ +G V L++D VE C
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDGIVILREDLTVEQC 60
Query: 60 EILQNSRIQLLVASDN----------KPQVKTEQS 84
+I+ S IQL V+SD+ KPQ TEQS
Sbjct: 61 QIVPTSDIQLEVSSDDDNPNHNDCDQKPQ--TEQS 93
>gi|393218664|gb|EJD04152.1| polyubiquitin [Fomitiporia mediterranea MF3/22]
Length = 321
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 TVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDTVKNKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 TVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDTVKNKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLSDYNIQKESTL 295
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQL 69
I + S + L
Sbjct: 289 IQKESTLHL 297
>gi|223646966|gb|ACN10241.1| Ubiquitin [Salmo salar]
gi|223672829|gb|ACN12596.1| Ubiquitin [Salmo salar]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP + + +G + ++ L D + + + + R
Sbjct: 253 NVKAKIQDKEGIPPGQQRMIFAGKQPEEGGPLSDYNIQKESTLHLFRR 300
>gi|195337251|ref|XP_002035242.1| GM14032 [Drosophila sechellia]
gi|194128335|gb|EDW50378.1| GM14032 [Drosophila sechellia]
Length = 915
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I+L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTINLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ K+ + Q F KQ
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSDTIENVKA---KIQDKEGISPDQQRLIFAGKQ-- 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 810 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GI +Q L+F G+ L+D R +
Sbjct: 761 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 821 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 860
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 861 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 908
>gi|225465615|ref|XP_002267017.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
Length = 538
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLVDYNIQKESTL 523
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + + L+++ +DT
Sbjct: 61 IQKDSTLHLVLRLRGGMQIFVKTLT--------------------RKTITLEVESSDTTD 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAHYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLVLR 528
>gi|92790164|emb|CAI83751.1| Polyubiqutin 1 [Entodinium caudatum]
Length = 297
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 121/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 69 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 128
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 129 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 168
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R G
Sbjct: 169 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGG 220
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 221 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 269
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D+R+ +++ + T+
Sbjct: 270 LEDNRTLADYNIQKESTL 287
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 125/268 (46%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R + I + S + L
Sbjct: 2 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 61
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + LD++ +DT+ +K KI +
Sbjct: 62 VLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIENVKAKIQDK 101
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D+R+L D + + + + +R GM ++
Sbjct: 102 EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 148
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I ++V SD + ++ ++Q +P D I+ ++D+R+
Sbjct: 149 VKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDNRTLAD 202
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 203 YNIQKESTLHLVLRLRGGMQIFVKTLTG 230
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 145 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 204
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 205 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 244
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 245 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 292
>gi|402224638|gb|EJU04700.1| polyubiquitin UbiD/Ubi4 [Dacryopinax sp. DJM-731 SS1]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|156064327|ref|XP_001598085.1| polyubiquitin [Sclerotinia sclerotiorum 1980]
gi|154691033|gb|EDN90771.1| polyubiquitin [Sclerotinia sclerotiorum 1980 UF-70]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHLVLR 300
>gi|58260904|ref|XP_567862.1| ATP-dependent protein binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134116983|ref|XP_772718.1| hypothetical protein CNBK0920 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255336|gb|EAL18071.1| hypothetical protein CNBK0920 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229943|gb|AAW46345.1| ATP-dependent protein binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|302680697|ref|XP_003030030.1| polyubiquitin [Schizophyllum commune H4-8]
gi|2739333|gb|AAB94630.1| polyubiquitin [Schizophyllum commune]
gi|300103721|gb|EFI95127.1| polyubiquitin [Schizophyllum commune H4-8]
gi|328770661|gb|EGF80702.1| polyubiquitin [Batrachochytrium dendrobatidis JAM81]
gi|409044635|gb|EKM54116.1| hypothetical protein PHACADRAFT_257732 [Phanerochaete carnosa
HHB-10118-sp]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|336372565|gb|EGO00904.1| hypothetical protein SERLA73DRAFT_178893 [Serpula lacrymans var.
lacrymans S7.3]
Length = 312
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLSDYNIQKESTL 295
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLL 70
I + S + L+
Sbjct: 289 IQKESTLHLV 298
>gi|344232965|gb|EGV64838.1| ubiquitin [Candida tenuis ATCC 10573]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|335345806|gb|AEH41483.1| ubiquitin [Endocarpon pusillum]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLSDYNI 213
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKEFTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|169847035|ref|XP_001830230.1| ubiquitin [Coprinopsis cinerea okayama7#130]
gi|116508706|gb|EAU91601.1| ubiquitin [Coprinopsis cinerea okayama7#130]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|92790166|emb|CAI83752.1| Polyubiqutin 1 [Eudiplodinium maggii]
Length = 259
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 121/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 31 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 90
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 91 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 130
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R G
Sbjct: 131 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGG 182
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 183 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 231
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D+R+ +++ + T+
Sbjct: 232 LEDNRTLADYNIQKESTL 249
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 107 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 166
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 167 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 206
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 207 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 254
>gi|170097832|ref|XP_001880135.1| ubiquitin [Laccaria bicolor S238N-H82]
gi|395056|emb|CAA80851.1| ubiquitin [Phanerochaete chrysosporium]
gi|164644573|gb|EDR08822.1| ubiquitin [Laccaria bicolor S238N-H82]
gi|389741436|gb|EIM82624.1| ubiquitin [Stereum hirsutum FP-91666 SS1]
Length = 381
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|30679302|ref|NP_849292.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|186511482|ref|NP_001118922.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|240255760|ref|NP_974516.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|224115232|ref|XP_002316978.1| predicted protein [Populus trichocarpa]
gi|297813891|ref|XP_002874829.1| hypothetical protein ARALYDRAFT_490155 [Arabidopsis lyrata subsp.
lyrata]
gi|356536051|ref|XP_003536554.1| PREDICTED: polyubiquitin-like isoform 1 [Glycine max]
gi|356536053|ref|XP_003536555.1| PREDICTED: polyubiquitin-like isoform 2 [Glycine max]
gi|356536055|ref|XP_003536556.1| PREDICTED: polyubiquitin-like isoform 3 [Glycine max]
gi|449458219|ref|XP_004146845.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
gi|449517130|ref|XP_004165599.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
gi|302393787|sp|P69325.2|UBIQP_SOYBN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302596002|sp|Q3E7T8.2|UBQ14_ARATH RecName: Full=Polyubiquitin 14; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|1076708|pir||S49332 polyubiquitin 4 - common sunflower
gi|25294250|pir||G85036 polyubiquitin [imported] - Arabidopsis thaliana
gi|303901|dbj|BAA03764.1| ubiquitin [Glycine max]
gi|456714|dbj|BAA05670.1| ubiquitin [Glycine max]
gi|556688|emb|CAA84440.1| seed tetraubiquitin [Helianthus annuus]
gi|994785|dbj|BAA05085.1| Ubiquitin [Glycine max]
gi|4263514|gb|AAD15340.1| putative polyubiquitin [Arabidopsis thaliana]
gi|7269774|emb|CAB77774.1| polyubiquitin [Arabidopsis thaliana]
gi|21593346|gb|AAM65295.1| polyubiquitin (UBQ14) [Arabidopsis thaliana]
gi|53850087|emb|CAH59738.1| polyubiquitin [Plantago major]
gi|222423150|dbj|BAH19554.1| AT4G02890 [Arabidopsis thaliana]
gi|222860043|gb|EEE97590.1| predicted protein [Populus trichocarpa]
gi|297320666|gb|EFH51088.1| hypothetical protein ARALYDRAFT_490155 [Arabidopsis lyrata subsp.
lyrata]
gi|332656846|gb|AEE82246.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|332656847|gb|AEE82247.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|332657103|gb|AEE82503.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|399513942|gb|AFP43341.1| polyubiquitin [Arabidopsis thaliana]
gi|1096513|prf||2111434A tetraubiquitin
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|405123351|gb|AFR98116.1| polyubiquitin [Cryptococcus neoformans var. grubii H99]
Length = 381
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|356548680|ref|XP_003542728.1| PREDICTED: polyubiquitin-C-like isoform 1 [Glycine max]
gi|356548682|ref|XP_003542729.1| PREDICTED: polyubiquitin-C-like isoform 2 [Glycine max]
Length = 533
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLADYNIQKESTL 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528
>gi|328856761|gb|EGG05881.1| hypothetical protein MELLADRAFT_87680 [Melampsora larici-populina
98AG31]
Length = 535
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLADYNIQKESTL 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528
>gi|225465609|ref|XP_002266370.1| PREDICTED: polyubiquitin 4-like [Vitis vinifera]
Length = 383
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|115444401|ref|NP_001045980.1| Os02g0161900 [Oryza sativa Japonica Group]
gi|115469558|ref|NP_001058378.1| Os06g0681400 [Oryza sativa Japonica Group]
gi|6013289|gb|AAF01315.1|AF184279_1 polyubiquitin [Oryza sativa Indica Group]
gi|6013291|gb|AAF01316.1|AF184280_1 polyubiquitin [Oryza sativa Indica Group]
gi|416038|emb|CAA53665.1| polyubiquitin [Oryza sativa Indica Group]
gi|1574944|gb|AAC49806.1| polyubiquitin [Oryza sativa Indica Group]
gi|49389251|dbj|BAD25213.1| polyubiquitin 6 [Oryza sativa Japonica Group]
gi|113535511|dbj|BAF07894.1| Os02g0161900 [Oryza sativa Japonica Group]
gi|113596418|dbj|BAF20292.1| Os06g0681400 [Oryza sativa Japonica Group]
gi|215715366|dbj|BAG95117.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218190115|gb|EEC72542.1| hypothetical protein OsI_05955 [Oryza sativa Indica Group]
gi|222622224|gb|EEE56356.1| hypothetical protein OsJ_05481 [Oryza sativa Japonica Group]
gi|284431760|gb|ADB84621.1| polyubiquitin [Oryza sativa Japonica Group]
gi|306415955|gb|ADM86852.1| polyubiquitin [Oryza sativa Japonica Group]
gi|326504784|dbj|BAK06683.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|332379898|gb|AEE65380.1| ubiquitin 2 [Panicum virgatum]
gi|413926517|gb|AFW66449.1| ubiquitin2 [Zea mays]
Length = 457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|389742108|gb|EIM83295.1| polyubiquitin [Stereum hirsutum FP-91666 SS1]
gi|449546777|gb|EMD37746.1| polyubiquitin [Ceriporiopsis subvermispora B]
gi|449550837|gb|EMD41801.1| polyubiquitin [Ceriporiopsis subvermispora B]
Length = 457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|326511535|dbj|BAJ91912.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522901|dbj|BAJ88496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|30679945|ref|NP_851029.1| polyubiquitin 3 [Arabidopsis thaliana]
gi|30679951|ref|NP_568112.2| polyubiquitin 3 [Arabidopsis thaliana]
gi|79326803|ref|NP_001031824.1| polyubiquitin 3 [Arabidopsis thaliana]
gi|122237441|sp|Q1EC66.1|UBQ3_ARATH RecName: Full=Polyubiquitin 3; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|7413601|emb|CAB86091.1| polyubiquitin (ubq3) [Arabidopsis thaliana]
gi|9757775|dbj|BAB08384.1| polyubiquitin [Arabidopsis thaliana]
gi|27311629|gb|AAO00780.1| polyubiquitin (UBQ3) [Arabidopsis thaliana]
gi|108385299|gb|ABF85770.1| At5g03240 [Arabidopsis thaliana]
gi|222423646|dbj|BAH19791.1| AT5G03240 [Arabidopsis thaliana]
gi|332003191|gb|AED90574.1| polyubiquitin 3 [Arabidopsis thaliana]
gi|332003192|gb|AED90575.1| polyubiquitin 3 [Arabidopsis thaliana]
gi|332003193|gb|AED90576.1| polyubiquitin 3 [Arabidopsis thaliana]
Length = 306
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|242055399|ref|XP_002456845.1| hypothetical protein SORBIDRAFT_03g043940 [Sorghum bicolor]
gi|242064116|ref|XP_002453347.1| hypothetical protein SORBIDRAFT_04g004280 [Sorghum bicolor]
gi|357148716|ref|XP_003574869.1| PREDICTED: polyubiquitin-like isoform 1 [Brachypodium distachyon]
gi|357148721|ref|XP_003574870.1| PREDICTED: polyubiquitin-like isoform 2 [Brachypodium distachyon]
gi|357148724|ref|XP_003574871.1| PREDICTED: polyubiquitin-like isoform 3 [Brachypodium distachyon]
gi|302393780|sp|P69309.2|UBIQP_AVEFA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|320608|pir||S28426 polyubiquitin 4 - wild oat
gi|15989|emb|CAA49200.1| tetraubiquitin [Avena fatua]
gi|777758|gb|AAC37466.1| polyubiquitin [Saccharum hybrid cultivar H65-7052]
gi|25044841|gb|AAM28291.1| tetrameric ubiquitin [Ananas comosus]
gi|241928820|gb|EES01965.1| hypothetical protein SORBIDRAFT_03g043940 [Sorghum bicolor]
gi|241933178|gb|EES06323.1| hypothetical protein SORBIDRAFT_04g004280 [Sorghum bicolor]
gi|332379896|gb|AEE65379.1| ubiquitin 1 [Panicum virgatum]
gi|451854822|gb|EMD68114.1| hypothetical protein COCSADRAFT_108224 [Cochliobolus sativus
ND90Pr]
gi|452000986|gb|EMD93446.1| hypothetical protein COCHEDRAFT_1202381 [Cochliobolus
heterostrophus C5]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|309252551|gb|ADO60140.1| ubiquitin [Beauveria bassiana]
Length = 215
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLSDYNI 213
>gi|297841025|ref|XP_002888394.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
gi|297334235|gb|EFH64653.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
Length = 483
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R + +++ G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSVNSSKYG 464
Query: 181 MG 182
+G
Sbjct: 465 IG 466
>gi|145352566|ref|XP_001420612.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580847|gb|ABO98905.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 381
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|23397122|gb|AAN31845.1| putative polyubiquitin (UBQ10) [Arabidopsis thaliana]
Length = 464
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 381 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 411
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 404
Query: 121 RLKEKIHEMESIP 133
+K KI + E IP
Sbjct: 405 NVKAKIQDKEGIP 417
>gi|226763|prf||1604470A poly-ubiquitin
Length = 272
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 44 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 103
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 104 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 143
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 144 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 195
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 196 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 244
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 245 LEDGRTLADYNIQKESTL 262
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 120 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 179
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 180 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 219
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 220 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 267
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 109/244 (44%), Gaps = 49/244 (20%)
Query: 34 QGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLK 93
+GIP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 1 RGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT-------- 52
Query: 94 INIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLR 153
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L
Sbjct: 53 ------GKT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 100
Query: 154 DCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
D + + + + +R GM ++ V T G K I +EV +SD + ++
Sbjct: 101 DYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVK 146
Query: 214 KELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNG 263
++Q +P D I+ ++D R+ +++ + T+ +IF
Sbjct: 147 AKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 201
Query: 264 SVTG 267
++TG
Sbjct: 202 TLTG 205
>gi|336372502|gb|EGO00841.1| hypothetical protein SERLA73DRAFT_121253 [Serpula lacrymans var.
lacrymans S7.3]
Length = 371
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 143 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 203 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 242
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 243 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 294
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 295 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 343
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 344 LEDGRTLSDYNIQKESTL 361
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 137/323 (42%), Gaps = 75/323 (23%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLV-----------------------ASDN----KPQVKTEQSSPSKKIHLK 93
I + S + L++ +SD K +++ ++ P + H +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQHGR 120
Query: 94 I----NIPSNSKTH---------------HHHHHLPLDMDVNDTVLRLKEKIHEMESIPV 134
NI S H + L+++ +DT+ +K KI + E IP
Sbjct: 121 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 180
Query: 135 NRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQC 194
++ + +G +L+D R+L D + + + + +R GM ++ V T
Sbjct: 181 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKTLT 227
Query: 195 GNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQ 254
G K I +EV +SD + ++ ++Q +P D I+ ++D R+ +++ +
Sbjct: 228 G-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 281
Query: 255 GDTI----------EIFNGSVTG 267
T+ +IF ++TG
Sbjct: 282 ESTLHLVLRLRGGMQIFVKTLTG 304
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 219 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 278
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 279 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 318
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 319 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 366
>gi|357513725|ref|XP_003627151.1| Ubiquitin [Medicago truncatula]
gi|327492449|dbj|BAK18565.1| polyubiquitin [Mesembryanthemum crystallinum]
gi|355521173|gb|AET01627.1| Ubiquitin [Medicago truncatula]
Length = 533
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLADYNIQKESTL 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528
>gi|187729698|gb|ACD31680.1| ubiquitin [Gossypium hirsutum]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLPDYNIQKESTLHLVLR 300
>gi|68160568|gb|AAY86773.1| polyubiquitin [Noccaea caerulescens]
Length = 382
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|21592581|gb|AAM64530.1| ubiquitin homolog [Arabidopsis thaliana]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLXLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|226502871|ref|NP_001148453.1| LOC100282068 [Zea mays]
gi|224059606|ref|XP_002299930.1| predicted protein [Populus trichocarpa]
gi|357474771|ref|XP_003607671.1| Ubiquitin [Medicago truncatula]
gi|902586|gb|AAC49014.1| ubiquitin [Zea mays]
gi|195619382|gb|ACG31521.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
gi|222847188|gb|EEE84735.1| predicted protein [Populus trichocarpa]
gi|238013752|gb|ACR37911.1| unknown [Zea mays]
gi|355508726|gb|AES89868.1| Ubiquitin [Medicago truncatula]
gi|413926508|gb|AFW66440.1| putative ubiquitin family protein isoform 1 [Zea mays]
gi|413926509|gb|AFW66441.1| putative ubiquitin family protein isoform 2 [Zea mays]
Length = 381
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|357474769|ref|XP_003607670.1| Ubiquitin [Medicago truncatula]
gi|355508725|gb|AES89867.1| Ubiquitin [Medicago truncatula]
Length = 533
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLADYNIQKESTL 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528
>gi|342298462|emb|CBY46745.1| polyubiquitin 10 protein [Lepidium appelianum]
Length = 308
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 4 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 63
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 64 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 103
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 104 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 155
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 156 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 204
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 205 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 241
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 156 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 215
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 216 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 255
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 256 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 303
>gi|281211832|gb|EFA85994.1| hypothetical protein PPL_01227 [Polysphondylium pallidum PN500]
Length = 385
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 156 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 216 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 255
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 256 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 307
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 308 M-----QIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 356
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 357 LEDGRTLSDYNI 368
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 54/281 (19%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 100
Query: 121 RLKEKIH----EMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATST 176
+K KI M P+N+ L+ +G +L+D R+L D + + + + +R
Sbjct: 101 NVKTKIQGYRARMVFHPINQRLI-FAGKQLEDGRTLSDYNIQKESTLHLVLR-------- 151
Query: 177 TSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIY 236
GM ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 152 LRGGM-----QIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE-----GIPPDQQRLIF 200
Query: 237 KQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 201 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 241
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 232 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 291
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 292 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 331
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 332 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 379
>gi|147834511|emb|CAN71997.1| hypothetical protein VITISV_004025 [Vitis vinifera]
Length = 538
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTIEIF 261
++D R+ +++ + T+ +
Sbjct: 506 LEDGRTLVDYNIQKESTLHLI 526
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLKVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + + L+++ +DT
Sbjct: 61 IQKDSTLHLVLRLRGGMQIFVKTLT--------------------RKTITLEVESSDTTD 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLILR 528
>gi|92790152|emb|CAI83745.1| Polyubiqutin 1 [Isotricha intestinalis]
Length = 301
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 121/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 73 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 132
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 133 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 172
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R G
Sbjct: 173 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGG 224
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 225 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 273
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D+R+ +++ + T+
Sbjct: 274 LEDNRTLADYNIQKESTL 291
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 125/268 (46%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R + I + S + L
Sbjct: 6 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 65
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + LD++ +DT+ +K KI +
Sbjct: 66 VLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIENVKAKIQDK 105
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D+R+L D + + + + +R GM ++
Sbjct: 106 EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 152
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I ++V SD + ++ ++Q +P D I+ ++D+R+
Sbjct: 153 VKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDNRTLAD 206
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 207 YNIQKESTLHLVLRLRGGMQIFVKTLTG 234
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 149 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 208
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 209 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 248
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 249 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 296
>gi|53850091|emb|CAH59740.1| polyubiquitin [Plantago major]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|225465623|ref|XP_002267206.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
Length = 538
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLADYNIQKESTL 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528
>gi|217074566|gb|ACJ85643.1| unknown [Medicago truncatula]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQNKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|302393779|sp|P42740.2|UBIQP_AGLNE RecName: Full=Polyubiquitin; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Flags: Precursor
gi|166336|gb|AAA72126.1| polyubiquitin [Aglaothamnion neglectum]
gi|445141|prf||1908440A poly-ubiquitin
Length = 457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTIT--------------GKT------ITLEVESSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLSDYNLQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
+ + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 LQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVESSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 430 LEDGRTLSDYNIQKESTL 447
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
+ S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 NQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTITG-KTITLEVESSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|356548684|ref|XP_003542730.1| PREDICTED: polyubiquitin 10-like [Glycine max]
Length = 457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|255081913|ref|XP_002508175.1| ubiquitin [Micromonas sp. RCC299]
gi|303285332|ref|XP_003061956.1| ubiquitin [Micromonas pusilla CCMP1545]
gi|226456367|gb|EEH53668.1| ubiquitin [Micromonas pusilla CCMP1545]
gi|226523451|gb|ACO69433.1| ubiquitin [Micromonas sp. RCC299]
Length = 381
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|156101796|ref|XP_001616591.1| polyubiquitin 5 [Plasmodium vivax Sal-1]
gi|148805465|gb|EDL46864.1| polyubiquitin 5, putative [Plasmodium vivax]
Length = 381
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|16660462|gb|AAL27564.1|AF429430_1 polyubiquitin OUB2 [Olea europaea]
Length = 457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|388578851|gb|EIM19184.1| ubiquitin [Wallemia sebi CBS 633.66]
Length = 701
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 473 MQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 532
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + + L+++ +DT+
Sbjct: 533 IQKESTLHLVLRLRGGMQVFVKTLT--------------------GKTITLEVESSDTID 572
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 573 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 624
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 625 M-----QVFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 673
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 674 LEDGRTLSDYNIQKESTL 691
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 113/249 (45%), Gaps = 39/249 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 213 GKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 272
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + + L+++ DT+ +K KI +
Sbjct: 273 VLRLRGGMQIFVKTLT--------------------GKTITLEVESQDTIDNVKTKIQDK 312
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 313 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QVF 359
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 360 VKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 413
Query: 250 HHVGQGDTI 258
+++ + T+
Sbjct: 414 YNIQKESTL 422
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 125/290 (43%), Gaps = 52/290 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKI---NIPSNSKTHHHHHH--------- 108
I + S + L++ Q+ ++ K I L++ + N KT
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVESQDTIDNVKTKIQDKEGIPPDQQRL 195
Query: 109 --------------------LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQD 148
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D
Sbjct: 196 IFAGKQLEDGLFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 255
Query: 149 HRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDN 208
R+L D + + + + +R GM ++ V T G K I +EV + D
Sbjct: 256 GRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESQDT 301
Query: 209 VSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
+ ++ ++Q +P D I+ ++D R+ +++ + T+
Sbjct: 302 IDNVKTKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 346
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 42/241 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQVFVKTLTGKTITLDVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESQDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKL------HQRYHFHLPQ--DGY 232
M ++ V T G K I +EV + D + ++ ++Q QR F Q DG
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGL 206
Query: 233 F 233
F
Sbjct: 207 F 207
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 549 MQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 608
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + + L+++ +DT+
Sbjct: 609 IQKESTLHLVLRLRGGMQVFVKTLT--------------------GKTITLEVESSDTID 648
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 649 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 696
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 280 MQIFVKTLTGKTITLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 339
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ QV + + + L+++ +DT+
Sbjct: 340 IQKESTLHLVLRLRGGMQVFVKTLT--------------------GKTITLEVESSDTID 379
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 380 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 427
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 35 GIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKI 94
GIP +Q L+F G+ L+D R + I + S + L++ QV + +
Sbjct: 431 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLT--------- 481
Query: 95 NIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D
Sbjct: 482 -----------GKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 530
Query: 155 CELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRK 214
+ + + + +R GM ++ V T G K I +EV +SD + ++
Sbjct: 531 YNIQKESTLHLVLR--------LRGGM-----QVFVKTLTG-KTITLEVESSDTIDNVKT 576
Query: 215 ELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
++Q +P D I+ ++D R+ +++ + T+
Sbjct: 577 KIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 615
>gi|242096698|ref|XP_002438839.1| hypothetical protein SORBIDRAFT_10g027030 [Sorghum bicolor]
gi|241917062|gb|EER90206.1| hypothetical protein SORBIDRAFT_10g027030 [Sorghum bicolor]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKDSTL 219
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + ++ + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKDSTLHLVLR 224
>gi|71008515|ref|XP_758220.1| hypothetical protein UM02073.1 [Ustilago maydis 521]
gi|46097838|gb|EAK83071.1| hypothetical protein UM02073.1 [Ustilago maydis 521]
Length = 387
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLSDYNI 213
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 235 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 294
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 295 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 334
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 335 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 382
>gi|248337|gb|AAB21993.1| polyubiquitin [Zea mays]
gi|248339|gb|AAB21994.1| polyubiquitin [Zea mays]
gi|33323474|gb|AAQ07454.1| ubiquitin [Musa acuminata]
gi|52076878|dbj|BAD45891.1| polyubiquitin [Oryza sativa Japonica Group]
gi|218198760|gb|EEC81187.1| hypothetical protein OsI_24193 [Oryza sativa Indica Group]
gi|222636097|gb|EEE66229.1| hypothetical protein OsJ_22384 [Oryza sativa Japonica Group]
gi|413926516|gb|AFW66448.1| ubiquitin2 [Zea mays]
gi|413935667|gb|AFW70218.1| clone MubG1 ubiquitin [Zea mays]
Length = 533
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLADYNIQKESTL 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528
>gi|392569337|gb|EIW62510.1| ubiquitin 10.1 [Trametes versicolor FP-101664 SS1]
Length = 463
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 127/277 (45%), Gaps = 43/277 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R S
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGAFRVLDS-- 310
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
+++ V G + I +EV +SD + +++ ++Q++ + D I+
Sbjct: 311 -----MQIFVKWLHG-RTITLEVRSSDTIDDVKAKIQEIE-----GISPDRQRLIFASKQ 359
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+DD R+ +++ + T+ +IF ++TG
Sbjct: 360 LDDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 396
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + G+ T+EV DT+ ++K KI++ +GI +Q L+F + L D R +
Sbjct: 311 MQIFVKWLHGRTITLEVRSSDTIDDVKAKIQEIEGISPDRQRLIFASKQLDDGRTLSDYN 370
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 371 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 410
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 411 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 458
>gi|164521185|gb|ABY60454.1| putative polyubiquitin [Adonis aestivalis var. palaestina]
Length = 281
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 12 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 71
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 72 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 111
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 112 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 163
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 164 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 212
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 213 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 249
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 88 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 147
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 148 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 187
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 188 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 239
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 240 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 270
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 164 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 223
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 224 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 263
Query: 121 RLKEKIHEMESIP 133
+K KI + E IP
Sbjct: 264 NVKAKIQDKEGIP 276
>gi|155965254|gb|ABU40645.1| polyubiquitin [Triticum aestivum]
Length = 380
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|124377854|tpd|FAA00317.1| TPA: polyubiquitin [Aspergillus nidulans FGSC A4]
Length = 304
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|116312012|emb|CAJ86369.1| OSIGBa0117N13.13 [Oryza sativa Indica Group]
gi|116312055|emb|CAJ86419.1| H0303G06.8 [Oryza sativa Indica Group]
gi|125549841|gb|EAY95663.1| hypothetical protein OsI_17529 [Oryza sativa Indica Group]
Length = 381
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|119192382|ref|XP_001246797.1| polyubiquitin [Coccidioides immitis RS]
gi|145258352|ref|XP_001402015.1| ubiquitin [Aspergillus niger CBS 513.88]
gi|258573789|ref|XP_002541076.1| ubiquitin [Uncinocarpus reesii 1704]
gi|296808323|ref|XP_002844500.1| polyubiquitin [Arthroderma otae CBS 113480]
gi|303312875|ref|XP_003066449.1| polyubiquitin, putative [Coccidioides posadasii C735 delta SOWgp]
gi|134074621|emb|CAK44654.1| unnamed protein product [Aspergillus niger]
gi|237901342|gb|EEP75743.1| ubiquitin [Uncinocarpus reesii 1704]
gi|238843983|gb|EEQ33645.1| polyubiquitin [Arthroderma otae CBS 113480]
gi|240106111|gb|EER24304.1| polyubiquitin, putative [Coccidioides posadasii C735 delta SOWgp]
gi|350632449|gb|EHA20817.1| hypothetical protein ASPNIDRAFT_214265 [Aspergillus niger ATCC
1015]
gi|392863964|gb|EJB10724.1| polyubiquitin [Coccidioides immitis RS]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|67191208|ref|NP_066289.2| polyubiquitin-C [Homo sapiens]
Length = 685
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPSDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|16660459|gb|AAL27563.1|AF429429_1 polyubiquitin OUB1 [Olea europaea]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|426263332|emb|CCG34086.1| Polyubiquitin [uncultured eukaryote]
Length = 304
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----RIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 278 LEDGRTLSDYNI 289
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+ + L+ + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLV-------------------LRLRGGMRIFVKT-LTGKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNA 161
+K KI + E IP ++ + +G +L+D R+L D + A
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKRA 293
>gi|297724233|ref|NP_001174480.1| Os05g0504766 [Oryza sativa Japonica Group]
gi|242096828|ref|XP_002438904.1| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
gi|4809266|gb|AAD30173.1|AF148448_1 polyubiquitin [Sporobolus stapfianus]
gi|57863866|gb|AAW56906.1| polyubiquitin [Oryza sativa Japonica Group]
gi|125552905|gb|EAY98614.1| hypothetical protein OsI_20535 [Oryza sativa Indica Group]
gi|222632152|gb|EEE64284.1| hypothetical protein OsJ_19121 [Oryza sativa Japonica Group]
gi|241917127|gb|EER90271.1| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
gi|255676474|dbj|BAH93208.1| Os05g0504766 [Oryza sativa Japonica Group]
gi|326510917|dbj|BAJ91806.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521968|dbj|BAK04112.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|383843954|gb|AFH53939.1| polyubiquitin 4 [Brachypodium distachyon]
gi|383843956|gb|AFH53940.1| polyubiquitin 10 [Brachypodium distachyon]
Length = 381
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|302143596|emb|CBI22349.3| unnamed protein product [Vitis vinifera]
Length = 298
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 28 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 87
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 88 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 127
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 128 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 179
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 180 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 228
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 229 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 265
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 104 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 163
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 164 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 203
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 204 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 255
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 256 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 286
>gi|242062832|ref|XP_002452705.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
gi|241932536|gb|EES05681.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
Length = 459
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|3126967|gb|AAC16012.1| polyubiquitin [Elaeagnus umbellata]
Length = 458
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV + D + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESLDTIDNVKAQIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K +I+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESLDTIDNVKAQIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|302595949|sp|P0CH04.1|UBI1P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595950|sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|288112|emb|CAA45621.1| polyubiquitin [Petroselinum crispum]
gi|288114|emb|CAA45622.1| polyubiquitin [Petroselinum crispum]
Length = 458
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|395328003|gb|EJF60398.1| polyubiquitin [Dichomitus squalens LYAD-421 SS1]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|334362473|gb|AEG78435.1| ubiquitin C variant 3 [Epinephelus coioides]
Length = 268
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 2 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 61
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 62 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 101
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 102 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 153
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 154 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 202
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 203 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 239
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 78 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 137
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 138 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 177
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 178 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 229
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNV 209
M ++ V T G K I +EV SD +
Sbjct: 230 M-----QIFVKTLTG-KTITLEVEPSDTI 252
>gi|259487366|tpe|CBF85986.1| TPA: Polyubiquitin Fragment [Source:UniProtKB/TrEMBL;Acc:A2RVC1]
[Aspergillus nidulans FGSC A4]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|1332579|emb|CAA66667.1| polyubiquitin [Pinus sylvestris]
Length = 761
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLADYNIQKESTL 675
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVENSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + +KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------AKT------ITLEVESSDTID 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 756
>gi|240255756|ref|NP_849300.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|240255762|ref|NP_567291.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|240255764|ref|NP_001078353.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|224132654|ref|XP_002327848.1| predicted protein [Populus trichocarpa]
gi|449433926|ref|XP_004134747.1| PREDICTED: polyubiquitin-like isoform 1 [Cucumis sativus]
gi|449433928|ref|XP_004134748.1| PREDICTED: polyubiquitin-like isoform 2 [Cucumis sativus]
gi|302393785|sp|P69322.2|UBIQP_PEA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|20589|emb|CAA34886.1| unnamed protein product [Pisum sativum]
gi|4115339|gb|AAD03344.1| ubiquitin [Pisum sativum]
gi|15450661|gb|AAK96602.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
gi|49532982|dbj|BAD26592.1| polyubiquitin [Populus nigra]
gi|82409051|gb|ABB73307.1| ubiquitin [Lotus japonicus]
gi|118481117|gb|ABK92512.1| unknown [Populus trichocarpa]
gi|118482690|gb|ABK93264.1| unknown [Populus trichocarpa]
gi|118488167|gb|ABK95903.1| unknown [Populus trichocarpa]
gi|118488391|gb|ABK96012.1| unknown [Populus trichocarpa]
gi|118488630|gb|ABK96127.1| unknown [Populus trichocarpa]
gi|217874292|gb|ACK56276.1| ubiquitin [Populus trichocarpa]
gi|222837257|gb|EEE75636.1| predicted protein [Populus trichocarpa]
gi|332657101|gb|AEE82501.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|332657104|gb|AEE82504.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|332657105|gb|AEE82505.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|226707|prf||1603402A poly-ubiquitin
Length = 381
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|347968153|ref|XP_312337.4| AGAP002599-PA [Anopheles gambiae str. PEST]
gi|333468138|gb|EAA08053.5| AGAP002599-PA [Anopheles gambiae str. PEST]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 20/169 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRP 169
+K KI + E IP ++ + +G +L+D R+L D + + + + +RP
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESPLHLVLRP 301
>gi|124359683|gb|ABD32351.2| Ubiquitin [Medicago truncatula]
Length = 538
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 6 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 65
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 66 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 105
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 106 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 157
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 158 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 206
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 207 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 243
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI +GIP +Q L+F G+ L+D R +
Sbjct: 310 MQIFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 369
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 370 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 409
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 410 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 461
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 462 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 510
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 511 LEDGRTLADYNIQKESTL 528
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 158 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 217
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 218 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 257
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 258 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 309
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++ +P D I+
Sbjct: 310 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKILDKE-----GIPPDQQRLIFAGKQ 358
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 359 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 395
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 386 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 445
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 446 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 485
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 486 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 533
>gi|92790178|emb|CAI83758.1| Polyubiqutin 5 [Polyplastron multivesiculatum]
Length = 220
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 117/249 (46%), Gaps = 39/249 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D+R + I + S + L
Sbjct: 1 GKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 60
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ ++ K I L++ PS DT+ +K KI +
Sbjct: 61 VLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIDNVKAKIQDK 100
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D+R+L D + + + + +R GM ++
Sbjct: 101 EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 147
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV SD + ++ ++Q +P D I+ ++D+R+
Sbjct: 148 VKTLTG-KTITLEVEPSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDNRTLAD 201
Query: 250 HHVGQGDTI 258
+++ + T+
Sbjct: 202 YNIQKESTL 210
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 68 MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 127
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 128 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTID 167
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 168 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 215
>gi|18824|emb|CAA40324.1| hexaubiquitin protein [Helianthus annuus]
gi|1204096|emb|CAA40325.1| hexaubiquitin protein [Helianthus annuus]
Length = 457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|357475981|ref|XP_003608276.1| Ubiquitin [Medicago truncatula]
gi|355509331|gb|AES90473.1| Ubiquitin [Medicago truncatula]
Length = 533
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLADYNIQKESTL 523
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++ +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKILDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528
>gi|326501424|dbj|BAK02501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 430 LEDGRTLADYNIQKESTL 447
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K +I+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAEIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|224160432|ref|XP_002338212.1| predicted protein [Populus trichocarpa]
gi|222871285|gb|EEF08416.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|2760347|gb|AAB95251.1| ubiquitin [Arabidopsis thaliana]
Length = 456
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|240255754|ref|NP_849299.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|240255758|ref|NP_849301.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|297809731|ref|XP_002872749.1| hexameric polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|449454712|ref|XP_004145098.1| PREDICTED: polyubiquitin 10-like [Cucumis sativus]
gi|449471945|ref|XP_004153450.1| PREDICTED: polyubiquitin 10-like [Cucumis sativus]
gi|302595948|sp|P0CG85.1|UBI1P_NICSY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302596003|sp|Q8H159.2|UBQ10_ARATH RecName: Full=Polyubiquitin 10; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|170352|gb|AAA34123.1| hexameric polyubiquitin [Nicotiana sylvestris]
gi|870792|gb|AAA68878.1| polyubiquitin [Arabidopsis thaliana]
gi|4115333|gb|AAD03341.1| ubiquitin [Pisum sativum]
gi|4115335|gb|AAD03342.1| ubiquitin [Pisum sativum]
gi|22655101|gb|AAM98141.1| polyubiquitin UBQ10 [Arabidopsis thaliana]
gi|118481031|gb|ABK92469.1| unknown [Populus trichocarpa]
gi|147805226|emb|CAN64480.1| hypothetical protein VITISV_002813 [Vitis vinifera]
gi|241740189|gb|ACS68204.1| ubiquitin 10.1 [Brassica napus]
gi|297318586|gb|EFH49008.1| hexameric polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|312282619|dbj|BAJ34175.1| unnamed protein product [Thellungiella halophila]
gi|332657100|gb|AEE82500.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|332657102|gb|AEE82502.1| polyubiquitin 10 [Arabidopsis thaliana]
Length = 457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|358370809|dbj|GAA87419.1| polyubiquitin [Aspergillus kawachii IFO 4308]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|357513727|ref|XP_003627152.1| Ubiquitin [Medicago truncatula]
gi|355521174|gb|AET01628.1| Ubiquitin [Medicago truncatula]
Length = 270
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
>gi|330797961|ref|XP_003287025.1| ubiquitin [Dictyostelium purpureum]
gi|325082988|gb|EGC36453.1| ubiquitin [Dictyostelium purpureum]
Length = 365
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQV------------KTEQSSPSKKIHLKI-------------N 95
I + S + L++ Q+ + E S + + KI N
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEEDGRTLSDYN 272
Query: 96 IPSNSKTH---------------HHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQ 140
I S H + L+++ +DT+ +K KI + E IP ++ +
Sbjct: 273 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLI 332
Query: 141 SSGAELQDHRSLRDCELMDNAEIDVHVR 168
+G +L+D R+L D + + + + +R
Sbjct: 333 FAGKQLEDGRTLSDYNIQKESTLHLVLR 360
>gi|331236894|ref|XP_003331105.1| polyubiquitin-A [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|309310095|gb|EFP86686.1| polyubiquitin-A [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 609
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 604
>gi|297810399|ref|XP_002873083.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
lyrata]
gi|297318920|gb|EFH49342.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|297809843|ref|XP_002872805.1| hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp.
lyrata]
gi|297318642|gb|EFH49064.1| hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp.
lyrata]
Length = 309
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 259
>gi|1684855|gb|AAB36545.1| ubiquitin-like protein [Phaseolus vulgaris]
Length = 407
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 103 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 162
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 163 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 202
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 203 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 254
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 255 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 303
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 304 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 340
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 255 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 314
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 315 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 354
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 355 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 402
>gi|225461088|ref|XP_002282119.1| PREDICTED: polyubiquitin-A-like [Vitis vinifera]
Length = 761
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 756
>gi|356537527|ref|XP_003537278.1| PREDICTED: polyubiquitin 3-like [Glycine max]
Length = 306
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|241740196|gb|ACS68205.1| ubiquitin 10.2 [Brassica napus]
Length = 381
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|196016942|ref|XP_002118320.1| hypothetical protein TRIADDRAFT_64418 [Trichoplax adhaerens]
gi|190579096|gb|EDV19200.1| hypothetical protein TRIADDRAFT_64418 [Trichoplax adhaerens]
Length = 457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|302796783|ref|XP_002980153.1| hypothetical protein SELMODRAFT_271419 [Selaginella moellendorffii]
gi|302820321|ref|XP_002991828.1| hypothetical protein SELMODRAFT_162003 [Selaginella moellendorffii]
gi|300140366|gb|EFJ07090.1| hypothetical protein SELMODRAFT_162003 [Selaginella moellendorffii]
gi|300152380|gb|EFJ19023.1| hypothetical protein SELMODRAFT_271419 [Selaginella moellendorffii]
Length = 306
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|225715800|gb|ACO13746.1| Ubiquitin [Esox lucius]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DTV +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|224286458|gb|ACN40936.1| unknown [Picea sitchensis]
Length = 458
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|157671923|ref|NP_062613.3| polyubiquitin-C [Mus musculus]
gi|342187094|sp|P0CG50.2|UBC_MOUSE RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related 1; Contains:
RecName: Full=Ubiquitin-related 2; Flags: Precursor
Length = 734
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
>gi|93359417|gb|ABF13286.1| polyubiquitin [Anser anser]
Length = 265
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDT----------IEIFNGSVTG 267
++D R+ +++ + T ++IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTPHLVLRLRGGMQIFVKTLTG 238
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKI-------NIPSNSKTHHH 105
I + S L++ Q+ ++ K I L++ N+ + S+T H
Sbjct: 213 IQKESTPHLVLRLRGGMQIFV-KTLTGKTITLEVEPSDTIENVKARSRTRKH 263
>gi|4115337|gb|AAD03343.1| ubiquitin [Pisum sativum]
Length = 457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|28436481|gb|AAO43307.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 21 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 80
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 81 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 120
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 121 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 172
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 173 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 221
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 222 LEDGRTLADYNIQKESTL 239
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 97 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 156
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 157 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 196
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 197 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 244
>gi|602076|emb|CAA54603.1| pentameric polyubiquitin [Nicotiana tabacum]
Length = 346
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 335
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 328
Query: 121 RLKEKIHEMESIP 133
+K KI + E IP
Sbjct: 329 NVKAKIQDKEGIP 341
>gi|441630341|ref|XP_004089535.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
Length = 590
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 58 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 117
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 118 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 157
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 158 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 209
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 210 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 258
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 259 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 295
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 210 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 269
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 270 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 309
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 310 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 361
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 362 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 410
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 411 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 447
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 362 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 421
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 422 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 461
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 462 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 513
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 514 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 562
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 563 LEDGRTLSDYNIQKESTL 580
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 438 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 497
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 498 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 537
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 538 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 585
>gi|413926513|gb|AFW66445.1| ubiquitin2 [Zea mays]
Length = 535
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 3 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 62
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 63 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 102
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 103 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 154
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 155 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 203
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 204 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 240
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 155 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 215 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 254
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 255 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 306
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 307 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 355
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 356 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 392
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 307 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 366
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 367 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 406
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 407 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 458
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 459 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 507
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 508 LEDGRTLADYNIQKESTL 525
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 383 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 442
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 443 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 482
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 483 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 530
>gi|357123434|ref|XP_003563415.1| PREDICTED: polyubiquitin-A-like [Brachypodium distachyon]
Length = 609
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 604
>gi|217074516|gb|ACJ85618.1| unknown [Medicago truncatula]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|302595954|sp|P0CG84.1|UBI4P_NICSY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|170354|gb|AAA34124.1| pentameric polyubiquitin, partial [Nicotiana sylvestris]
Length = 377
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 73 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 132
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 133 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 172
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 173 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 224
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 225 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 273
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 274 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 310
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 6 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 65
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 66 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDK 105
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 106 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 152
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 153 VKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLAD 206
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 207 YNIQKESTLHLVLRLRGGMQIFVKTLTG 234
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 225 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 284
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 285 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 324
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 325 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 372
>gi|356519611|ref|XP_003528465.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
Length = 776
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 43/252 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ +
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVESXN---------------------- 553
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K K+ + E IP ++ + +G +LQD R+L D ++ + + + +R G
Sbjct: 554 -VKAKVQDKEGIPPDQQRLIFAGKQLQDGRTLADYNILKXSTLHLVLR--------LCGG 604
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 605 M-----QIFVKTLIG-KTITLEVESSDTIDNVKAKIQDKE-----SIPPDQQRLIFAGKQ 653
Query: 241 MDDDRSFRWHHV 252
++D + +++
Sbjct: 654 LEDGLTLADYNI 665
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV + +K K++ +GIP +Q L+F G+ LQD R +
Sbjct: 533 MQIFVKTLTGKTITLEVESXN----VKAKVQDKEGIPPDQQRLIFAGKQLQDGRTLADYN 588
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
IL+ S + L++ + +I +K I + L+++ +DT+
Sbjct: 589 ILKXSTLHLVL-----------RLCGGMQIFVKTLIGKT---------ITLEVESSDTID 628
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + ESIP ++ + +G +L+D +L D + ++ +H+ G
Sbjct: 629 NVKAKIQDKESIPPDQQRLIFAGKQLEDGLTLADYNIXEST---LHL------VLRLRGG 679
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K + +EV +SD + ++ + Q
Sbjct: 680 M-----QIFVKTLIG-KSVTLEVESSDTIDNVKAKFQ 710
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK+ T+EV DT+ +K K + +GI ++ L+F G+ L+D R +
Sbjct: 680 MQIFVKTLIGKSVTLEVESSDTIDNVKAKFQDKEGILPDQRRLIFAGKQLEDGRTLADXN 739
Query: 61 ILQNSRIQLLV 71
IL+ S + L++
Sbjct: 740 ILKESTLHLVL 750
>gi|413935668|gb|AFW70219.1| polyubiquitin-like protein [Zea mays]
Length = 502
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 35/236 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIY 236
M ++ V T G K I +EV +SD + ++ ++QK H L G I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQK-ESTLHLVLRLRGGMQIF 353
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 350 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 409
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 410 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 449
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 450 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 497
>gi|355754493|gb|AET06143.1| ubiquitin [Papaver somniferum]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|154275270|ref|XP_001538486.1| polyubiquitin [Ajellomyces capsulatus NAm1]
gi|150414926|gb|EDN10288.1| polyubiquitin [Ajellomyces capsulatus NAm1]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVENSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLSDYNIQKESTL 295
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVENSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVENSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|452820028|gb|EME27076.1| ubiquitin [Galdieria sulphuraria]
Length = 306
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|90655082|gb|ABD96088.1| polyubiquitin [Malus x domestica]
Length = 270
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 42 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 101
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 102 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 141
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 142 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 193
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 194 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 242
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 243 LEDGRTLADYNIQKESTL 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 118 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 177
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 178 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 217
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 218 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 265
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 107/242 (44%), Gaps = 49/242 (20%)
Query: 36 IPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKIN 95
IP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 1 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT---------- 50
Query: 96 IPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDC 155
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D
Sbjct: 51 ----GKT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 100
Query: 156 ELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
+ + + + +R GM ++ V T G K I +EV +SD + ++ +
Sbjct: 101 NIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKAK 146
Query: 216 LQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSV 265
+Q +P D I+ ++D R+ +++ + T+ +IF ++
Sbjct: 147 IQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 201
Query: 266 TG 267
TG
Sbjct: 202 TG 203
>gi|18412785|ref|NP_567286.1| ubiquitin 11 [Arabidopsis thaliana]
gi|30679296|ref|NP_849291.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|79325001|ref|NP_001031585.1| ubiquitin 11 [Arabidopsis thaliana]
gi|186511479|ref|NP_567247.2| polyubiquitin 14 [Arabidopsis thaliana]
gi|186511546|ref|NP_001118936.1| ubiquitin 11 [Arabidopsis thaliana]
gi|224078711|ref|XP_002305607.1| predicted protein [Populus trichocarpa]
gi|224169339|ref|XP_002339256.1| predicted protein [Populus trichocarpa]
gi|302595976|sp|P0CH33.1|UBQ11_ARATH RecName: Full=Polyubiquitin 11; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|5732081|gb|AAD48980.1|AF162444_12 contains similarity to Pfam family PF00240 - Ubiquitin family;
score=526.5, E=1.9e-154, N=3 [Arabidopsis thaliana]
gi|3882081|emb|CAA10056.1| polyubiquitin [Vicia faba]
gi|7267264|emb|CAB81047.1| AT4g05050 [Arabidopsis thaliana]
gi|12583569|emb|CAC27335.1| putative polyubiquitin [Picea abies]
gi|15450587|gb|AAK96565.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
gi|15810026|gb|AAL06940.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
gi|15982846|gb|AAL09770.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
gi|20466093|gb|AAM19968.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
gi|24899675|gb|AAN65052.1| Unknown protein [Arabidopsis thaliana]
gi|56481667|gb|AAV92464.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481669|gb|AAV92465.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481671|gb|AAV92466.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481673|gb|AAV92467.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481675|gb|AAV92468.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481677|gb|AAV92469.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481679|gb|AAV92470.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481681|gb|AAV92471.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481683|gb|AAV92472.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481685|gb|AAV92473.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481687|gb|AAV92474.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481689|gb|AAV92475.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481691|gb|AAV92476.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481693|gb|AAV92477.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481695|gb|AAV92478.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481697|gb|AAV92479.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481699|gb|AAV92480.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481701|gb|AAV92481.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481703|gb|AAV92482.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481705|gb|AAV92483.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481707|gb|AAV92484.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481709|gb|AAV92485.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481711|gb|AAV92486.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481713|gb|AAV92487.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481715|gb|AAV92488.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481717|gb|AAV92489.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481719|gb|AAV92490.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|110740912|dbj|BAE98552.1| hypothetical protein [Arabidopsis thaliana]
gi|222848571|gb|EEE86118.1| predicted protein [Populus trichocarpa]
gi|222874764|gb|EEF11895.1| predicted protein [Populus trichocarpa]
gi|332656844|gb|AEE82244.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|332656845|gb|AEE82245.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|332657068|gb|AEE82468.1| ubiquitin 11 [Arabidopsis thaliana]
gi|332657069|gb|AEE82469.1| ubiquitin 11 [Arabidopsis thaliana]
gi|332657070|gb|AEE82470.1| ubiquitin 11 [Arabidopsis thaliana]
gi|399513946|gb|AFP43343.1| polyubiquitin [Arabidopsis thaliana]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|118370588|ref|XP_001018495.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300262|gb|EAR98250.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 854
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 627 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 686
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 687 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 726
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 727 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 778
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 779 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 827
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 828 LEDGRTLSDYNIQKESTL 845
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 49/270 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V D++ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 560 GKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 619
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + LD++ +DT+ +K KI +
Sbjct: 620 VLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIENVKAKIQDK 659
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 660 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 706
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I ++V ASD + ++ ++Q +P D I+ ++D R+
Sbjct: 707 VKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 760
Query: 250 HHVGQGDTI----------EIFNGSVTGGS 269
+++ + T+ +IF ++TG +
Sbjct: 761 YNIQKESTLHLVLRLRGGMQIFVKTLTGKT 790
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 703 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 762
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 763 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 802
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 803 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 850
>gi|350592414|ref|XP_003483459.1| PREDICTED: polyubiquitin-C isoform 1 [Sus scrofa]
gi|350592416|ref|XP_003483460.1| PREDICTED: polyubiquitin-C isoform 2 [Sus scrofa]
gi|350592418|ref|XP_003483461.1| PREDICTED: polyubiquitin-C isoform 3 [Sus scrofa]
gi|350592420|ref|XP_003483462.1| PREDICTED: polyubiquitin-C isoform 4 [Sus scrofa]
gi|302595945|sp|P0CG68.1|UBC_PIG RecName: Full=Polyubiquitin-C; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
Length = 533
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI++ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|9837284|gb|AAG00512.1|AF285161_1 polyubiquitin C [Mus musculus]
Length = 734
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E I ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
>gi|356545971|ref|XP_003541406.1| PREDICTED: polyubiquitin-like [Glycine max]
Length = 269
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 40 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 99
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 100 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 139
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 140 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 191
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 192 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 240
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 241 LEDGRTLADYNIQKESTL 258
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 116 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 175
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 176 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 215
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 216 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 263
>gi|302496049|ref|XP_003010029.1| polyubiquitin UbiD/Ubi4, putative [Arthroderma benhamiae CBS
112371]
gi|315043104|ref|XP_003170928.1| ubiquitin [Arthroderma gypseum CBS 118893]
gi|327295188|ref|XP_003232289.1| polyubiquitin [Trichophyton rubrum CBS 118892]
gi|291173564|gb|EFE29389.1| polyubiquitin UbiD/Ubi4, putative [Arthroderma benhamiae CBS
112371]
gi|311344717|gb|EFR03920.1| ubiquitin [Arthroderma gypseum CBS 118893]
gi|326465461|gb|EGD90914.1| polyubiquitin [Trichophyton rubrum CBS 118892]
gi|326473983|gb|EGD97992.1| polyubiquitin [Trichophyton tonsurans CBS 112818]
gi|326480982|gb|EGE04992.1| ubiquitin [Trichophyton equinum CBS 127.97]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|30523391|gb|AAP31578.1| ubiquitin [Hevea brasiliensis]
Length = 230
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|340504493|gb|EGR30931.1| ubiquitin family protein, putative [Ichthyophthirius multifiliis]
Length = 329
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 25 MQIFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 84
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +D++
Sbjct: 85 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDSIE 124
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 125 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 176
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD++ ++ ++Q +P D I+
Sbjct: 177 M-----QIFVKTLTG-KTITLDVEASDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 225
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 226 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 262
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 177 MQIFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 236
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +D++
Sbjct: 237 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDSIE 276
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 277 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 324
>gi|57163957|ref|NP_001009202.1| polyubiquitin-B [Ovis aries]
gi|302595880|sp|P0CG55.1|UBB_SHEEP RecName: Full=Polyubiquitin-B; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
gi|2707837|gb|AAB92373.1| polyubiquitin [Ovis aries]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRMRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|198424689|ref|XP_002119546.1| PREDICTED: similar to ubiquitin isoform 2 [Ciona intestinalis]
gi|198424691|ref|XP_002119309.1| PREDICTED: similar to ubiquitin isoform 1 [Ciona intestinalis]
Length = 229
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 120/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDSID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD++ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDSIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDSID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|8394502|ref|NP_059010.1| polyubiquitin-C precursor [Rattus norvegicus]
gi|81872124|sp|Q63429.1|UBC_RAT RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|471154|dbj|BAA04129.1| polyubiquitin [Rattus norvegicus]
Length = 810
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
M ++ V T G K I +EV S N ++++E
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSVNTKKVKQE 789
>gi|2627131|dbj|BAA23487.1| polyubiquitin [Cricetulus griseus]
Length = 886
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 810 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 685 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 745 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 784
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 836
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
M ++ V T G K I +EV S+ + + ++E
Sbjct: 837 M-----QIFVKTLTG-KTITLEVEPSNTIKKSKQE 865
>gi|224116110|ref|XP_002317213.1| predicted protein [Populus trichocarpa]
gi|118487986|gb|ABK95814.1| unknown [Populus trichocarpa]
gi|222860278|gb|EEE97825.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|118484244|gb|ABK94002.1| unknown [Populus trichocarpa]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLADYNIQKESTL 295
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|18256864|gb|AAH21837.1| Ubc protein [Mus musculus]
Length = 658
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|290543384|ref|NP_001166536.1| polyubiquitin-B [Cavia porcellus]
gi|302595872|sp|P0CG54.1|UBB_CAVPO RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|1197093|dbj|BAA11842.1| ubiquitin [Cavia porcellus]
Length = 311
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|346986300|ref|NP_001231307.1| polyubiquitin [Cricetulus griseus]
gi|2627133|dbj|BAA23488.1| polyubiquitin [Cricetulus griseus]
Length = 1038
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 810 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 761 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 821 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 860
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 861 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 912
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 913 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 961
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 962 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 998
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 837 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 896
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 897 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 936
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 937 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 988
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
M ++ V T G K I +EV S+ + + ++E
Sbjct: 989 M-----QIFVKTLTG-KTITLEVEPSNTIKKSKQE 1017
>gi|2654141|gb|AAB87694.1| polyubiquitin [Amoeba proteus]
Length = 382
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPGDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPGDSID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D RSL D + + + + +R G
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV D++ +++++Q +P DG I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPGDSIDNVKQKIQDKE-----GIPPDGQGLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D S +++
Sbjct: 202 LEDGGSLSDYNI 213
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 115/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K+KI+ +GIP Q L+F G+ L+D +
Sbjct: 153 MQIFVKTLTGKTITLEVEPGDSIDNVKQKIQDKEGIPPDGQGLIFAGKQLEDGGSLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ D++
Sbjct: 213 IQKESTLHLVLRLRGGMQIFIKTLT--------------GKT------ITLEVEPGDSID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+KEKI + E IP ++ + +G +L+D RSL D + + + + +R G
Sbjct: 253 NVKEKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV D++ +++++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPGDSIDNVKQKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHV 252
++D RS +++
Sbjct: 354 LEDGRSLSDYNI 365
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +KEKI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFIKTLTGKTITLEVEPGDSIDNVKEKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ D++
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPGDSID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D RSL D + + + + +R
Sbjct: 329 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLR 376
>gi|35187449|gb|AAQ84316.1| fiber polyubiquitin [Gossypium barbadense]
Length = 229
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLPLVLR 224
>gi|28436483|gb|AAO43308.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 21 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 80
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 81 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 120
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 121 NVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 172
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 173 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 221
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 222 LEDGRTLAVYNIQKESTL 239
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 173 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYN 232
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 233 IQKESTLHLVL 243
>gi|28804499|dbj|BAC57955.1| polyubiquitin [Aster tripolium]
Length = 229
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|302595808|sp|P0CH27.1|RL402_TRYCR RecName: Full=Ubiquitin-60S ribosomal protein L40; Contains:
RecName: Full=Ubiquitin; Contains: RecName: Full=60S
ribosomal protein L40; Flags: Precursor
gi|162337|gb|AAA30271.1| ubiquitin precursor [Trypanosoma cruzi]
Length = 356
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTIALEVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|346986309|ref|NP_001231310.1| polyubiquitin [Cricetulus griseus]
gi|2118958|pir||S21083 polyubiquitin 5 - Chinese hamster
gi|49477|emb|CAA42941.1| polyubiquitin [Cricetulus griseus]
gi|25991946|gb|AAN76999.1| poly-ubiquitin [Biomphalaria glabrata]
Length = 381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|340374850|ref|XP_003385950.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
Length = 381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|2760345|gb|AAB95250.1| ubiquitin [Arabidopsis thaliana]
Length = 304
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQRESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|151935411|gb|ABS18744.1| ubiqutin ligase-like protein [Oryza sativa Japonica Group]
gi|326518380|dbj|BAJ88219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 229
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|225709684|gb|ACO10688.1| Ubiquitin [Caligus rogercresseyi]
Length = 229
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|29612653|gb|AAH49473.1| Zgc:172187 protein [Danio rerio]
Length = 480
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 23 MQIFVKTLAGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 82
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 83 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 122
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 123 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 174
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 175 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 223
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 224 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 260
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 175 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 234
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 235 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 274
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 275 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 326
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 327 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 375
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 376 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 412
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 327 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 386
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 387 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 426
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 427 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 474
>gi|221059958|ref|XP_002260624.1| ubiquitin [Plasmodium knowlesi strain H]
gi|193810698|emb|CAQ42596.1| ubiquitin, putative [Plasmodium knowlesi strain H]
Length = 609
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLDVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|168028716|ref|XP_001766873.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681852|gb|EDQ68275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYSIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ + + + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYSIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYS 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|74214198|dbj|BAE40351.1| unnamed protein product [Mus musculus]
Length = 278
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
>gi|47682711|gb|AAH69831.1| Zgc:172187 protein [Danio rerio]
gi|62530956|gb|AAH93444.1| Zgc:172187 protein [Danio rerio]
Length = 624
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 15 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 74
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 75 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 114
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 115 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 166
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 167 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 215
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 216 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 252
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 167 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 226
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 227 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 266
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 267 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 318
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 319 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 367
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 368 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 404
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 319 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 378
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 379 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 418
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 419 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 470
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 471 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 519
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 520 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 556
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 471 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 530
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 531 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 570
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 571 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 618
>gi|19483857|gb|AAH25894.1| Ubc protein [Mus musculus]
gi|23958188|gb|AAH36303.1| Ubc protein [Mus musculus]
gi|26372121|dbj|BAB27296.2| unnamed protein product [Mus musculus]
gi|62825885|gb|AAH94012.1| Ubc protein [Mus musculus]
Length = 354
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|426247176|ref|XP_004017362.1| PREDICTED: polyubiquitin-C-like isoform 2 [Ovis aries]
Length = 310
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|6755919|ref|NP_035794.1| polyubiquitin-B [Mus musculus]
gi|20302085|ref|NP_620250.1| polyubiquitin-B precursor [Rattus norvegicus]
gi|147904884|ref|NP_001090433.1| uncharacterized protein LOC779345 [Xenopus laevis]
gi|302595873|sp|P0CG62.1|UBB_CHICK RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595876|sp|P0CG49.1|UBB_MOUSE RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595879|sp|P0CG51.1|UBB_RAT RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|2118966|pir||I50437 polyubiquitin 4 - chicken
gi|55118|emb|CAA35999.1| ubiquitin [Mus musculus]
gi|212849|gb|AAA49128.1| ubiquitin I [Gallus gallus]
gi|471156|dbj|BAA03983.1| polyubiquitin [Rattus norvegicus]
gi|12840717|dbj|BAB24930.1| unnamed protein product [Mus musculus]
gi|12845838|dbj|BAB26919.1| unnamed protein product [Mus musculus]
gi|12846202|dbj|BAB27071.1| unnamed protein product [Mus musculus]
gi|12850137|dbj|BAB28606.1| unnamed protein product [Mus musculus]
gi|37805416|gb|AAH60312.1| Ubiquitin B [Rattus norvegicus]
gi|47477820|gb|AAH70919.1| Ubiquitin B [Rattus norvegicus]
gi|71682472|gb|AAI00342.1| Ubiquitin B [Mus musculus]
gi|74210110|dbj|BAE21330.1| unnamed protein product [Mus musculus]
gi|89891988|gb|ABD78846.1| ubiquitin C I [Anser anser]
gi|116487680|gb|AAI26016.1| MGC154789 protein [Xenopus laevis]
gi|148678404|gb|EDL10351.1| mCG23377, isoform CRA_a [Mus musculus]
gi|197693972|gb|ACH71654.1| ubiquitin C [Columba livia]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|325302882|tpg|DAA34473.1| TPA_exp: ubiquitin [Amblyomma variegatum]
Length = 241
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 2 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 61
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 62 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 101
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 102 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 153
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 154 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 202
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 203 LEDGRTLSDYNIQKESTLHLGLRLRGGMQIFVKTLTG 239
>gi|302784142|ref|XP_002973843.1| hypothetical protein SELMODRAFT_173723 [Selaginella moellendorffii]
gi|300158175|gb|EFJ24798.1| hypothetical protein SELMODRAFT_173723 [Selaginella moellendorffii]
Length = 457
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 430 LEDGRTLADYNIQKESTL 447
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|226469794|emb|CAX76727.1| polyubiquitin [Schistosoma japonicum]
gi|226473062|emb|CAX71217.1| polyubiquitin [Schistosoma japonicum]
gi|226473066|emb|CAX71219.1| polyubiquitin [Schistosoma japonicum]
Length = 304
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|209738556|gb|ACI70147.1| Ubiquitin [Salmo salar]
Length = 381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|21428336|gb|AAM49828.1| GH17513p [Drosophila melanogaster]
Length = 306
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|67523087|ref|XP_659604.1| hypothetical protein AN2000.2 [Aspergillus nidulans FGSC A4]
gi|40744745|gb|EAA63901.1| hypothetical protein AN2000.2 [Aspergillus nidulans FGSC A4]
Length = 323
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 19 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 78
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 79 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 118
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 119 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 170
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 171 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 219
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 220 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 256
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 171 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 231 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 270
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 271 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 318
>gi|444434919|dbj|BAM77034.1| ubiquitin C [Homo sapiens]
Length = 533
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKAITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K K+ + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GKA T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKAITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|58618886|gb|AAH89218.1| Ubc protein, partial [Rattus norvegicus]
Length = 656
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 75 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 134
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 135 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 174
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 175 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 226
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 227 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 275
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 276 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 312
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 227 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 286
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 287 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 326
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 327 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 378
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 379 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 427
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 428 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 464
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 379 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 438
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 439 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 478
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 479 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 530
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 531 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 579
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 580 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 616
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 8 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 67
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + + L+++ +DT+ +K KI +
Sbjct: 68 VLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIENVKAKIQDK 107
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 108 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 154
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV SD + ++ ++Q +P D I+ ++D R+
Sbjct: 155 VKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 208
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 209 YNIQKESTLHLVLRLRGGMQIFVKTLTG 236
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 455 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 514
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 515 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 554
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 555 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 606
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
M ++ V T G K I ++V S N ++++E
Sbjct: 607 M-----QIFVKTLTG-KTITLDVEPSVNTKKVKQE 635
>gi|329665078|ref|NP_001193236.1| polyubiquitin-C [Bos taurus]
gi|302595881|sp|P0CH28.1|UBC_BOVIN RecName: Full=Polyubiquitin-C; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
Length = 690
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI++ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|340709503|ref|XP_003393346.1| PREDICTED: polyubiquitin-B-like isoform 1 [Bombus terrestris]
gi|340709505|ref|XP_003393347.1| PREDICTED: polyubiquitin-B-like isoform 2 [Bombus terrestris]
Length = 157
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S L++ Q+ ++ K I L++++P DT+
Sbjct: 61 IQKESTSHLVLRLRGGMQISV-KTLTGKAITLEVDVP-------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KIHE E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIHEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|326517545|dbj|BAK03691.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 457
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKVQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 430 LEDGRTLADYNIQKESTL 447
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K K++ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|302789426|ref|XP_002976481.1| hypothetical protein SELMODRAFT_271198 [Selaginella moellendorffii]
gi|302803592|ref|XP_002983549.1| hypothetical protein SELMODRAFT_228943 [Selaginella moellendorffii]
gi|300148792|gb|EFJ15450.1| hypothetical protein SELMODRAFT_228943 [Selaginella moellendorffii]
gi|300155519|gb|EFJ22150.1| hypothetical protein SELMODRAFT_271198 [Selaginella moellendorffii]
Length = 381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|168016982|ref|XP_001761027.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687713|gb|EDQ74094.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 533
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLADYNIQKESTL 523
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528
>gi|168050741|ref|XP_001777816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670792|gb|EDQ57354.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|13879398|gb|AAH06680.1| Ubc protein [Mus musculus]
Length = 582
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
>gi|449266037|gb|EMC77164.1| Ubiquitin, partial [Columba livia]
Length = 290
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 278 LEDGRTLSDYNI 289
>gi|323452163|gb|EGB08038.1| polyubiquitin [Aureococcus anophagefferens]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDTIDNVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|302822499|ref|XP_002992907.1| hypothetical protein SELMODRAFT_162680 [Selaginella moellendorffii]
gi|302825882|ref|XP_002994512.1| hypothetical protein SELMODRAFT_163447 [Selaginella moellendorffii]
gi|300137503|gb|EFJ04420.1| hypothetical protein SELMODRAFT_163447 [Selaginella moellendorffii]
gi|300139252|gb|EFJ05996.1| hypothetical protein SELMODRAFT_162680 [Selaginella moellendorffii]
Length = 382
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|226473052|emb|CAX71212.1| polyubiquitin [Schistosoma japonicum]
Length = 304
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLCFRGGMQIFVKTLTG 238
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +D +
Sbjct: 213 IQKESTLHLVLCFRGGMQIFVKTLT--------------------GKTITLEVEPSDPIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIPKESTLPLVLR 300
>gi|260806905|ref|XP_002598324.1| hypothetical protein BRAFLDRAFT_113894 [Branchiostoma floridae]
gi|229283596|gb|EEN54336.1| hypothetical protein BRAFLDRAFT_113894 [Branchiostoma floridae]
Length = 600
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 117/277 (42%), Gaps = 58/277 (20%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + +
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES------------------- 445
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
L L+ + K I +EV SD + ++ ++Q +P D I+
Sbjct: 446 ----TLHLIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 496
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 497 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 533
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 20/159 (12%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 457 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 516
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ ++ K I L++ PS DT+ +K KI +
Sbjct: 517 VLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIENVKAKIQDK 556
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 595
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 524 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 583
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 584 IQKESTLHLVL 594
>gi|185135461|ref|NP_001117778.1| polyubiquitin [Oncorhynchus mykiss]
gi|157110833|ref|XP_001651266.1| ubiquitin [Aedes aegypti]
gi|13991678|gb|AAK51460.1|AF361365_1 polyubiquitin [Oncorhynchus mykiss]
gi|108883867|gb|EAT48092.1| AAEL000795-PA [Aedes aegypti]
gi|209149518|gb|ACI32978.1| Ubiquitin [Salmo salar]
gi|209737152|gb|ACI69445.1| Ubiquitin [Salmo salar]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|226473058|emb|CAX71215.1| ubiquitin C [Schistosoma japonicum]
Length = 456
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LLGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D +
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLTFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLTFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|223646702|gb|ACN10109.1| Ubiquitin [Salmo salar]
gi|223672553|gb|ACN12458.1| Ubiquitin [Salmo salar]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|16071|emb|CAA48140.1| ubiquitin [Antirrhinum majus]
Length = 296
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 68 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 127
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 128 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 167
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 168 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 219
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 220 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 268
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 269 LEDGRTLADYNIQKESTL 286
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 1 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 60
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 61 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDK 100
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 101 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 147
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 148 VKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLAD 201
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 202 YNIQKESTLHLVLRLRGGMQIFVKTLTG 229
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 144 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 203
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 204 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 243
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 244 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 291
>gi|1800281|gb|AAB68045.1| polyubiquitin [Fragaria x ananassa]
Length = 381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|73695428|gb|AAI03478.1| Ubc protein [Rattus norvegicus]
Length = 430
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
M ++ V T G K I ++V S N ++++E
Sbjct: 381 M-----QIFVKTLTG-KTITLDVEPSVNTKKVKQE 409
>gi|226484061|emb|CAX79699.1| ubiquitin C [Schistosoma japonicum]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ V +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|195125345|ref|XP_002007139.1| GI12770 [Drosophila mojavensis]
gi|193918748|gb|EDW17615.1| GI12770 [Drosophila mojavensis]
Length = 991
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 810 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 761 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 821 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 860
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 861 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 912
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 913 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 961
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 962 LEDGRTLSDYNIQKESTL 979
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 837 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 896
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 897 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 936
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 937 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 984
>gi|195132655|ref|XP_002010758.1| GI21526 [Drosophila mojavensis]
gi|260830119|ref|XP_002610009.1| hypothetical protein BRAFLDRAFT_131116 [Branchiostoma floridae]
gi|193907546|gb|EDW06413.1| GI21526 [Drosophila mojavensis]
gi|229295371|gb|EEN66019.1| hypothetical protein BRAFLDRAFT_131116 [Branchiostoma floridae]
Length = 609
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|194944118|ref|XP_001983129.1| GG19855 [Drosophila erecta]
gi|190647611|gb|EDV45009.1| GG19855 [Drosophila erecta]
Length = 328
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 59 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 118
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 119 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 158
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 159 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 210
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 211 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 259
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 260 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 296
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 135 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 194
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 195 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 234
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 235 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 286
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV SD + ++ ++Q
Sbjct: 287 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQ 317
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 49/257 (19%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVK 80
DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+
Sbjct: 3 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 62
Query: 81 TEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQ 140
+ + KT + L+++ +DT+ +K KI + E IP ++ +
Sbjct: 63 VKTLT--------------GKT------ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 102
Query: 141 SSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIP 200
+G +L+D R+L D + + + + +R GM ++ V T G K I
Sbjct: 103 FAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTIT 148
Query: 201 VEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI-- 258
+EV SD + ++ ++Q +P D I+ ++D R+ +++ + T+
Sbjct: 149 LEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 203
Query: 259 --------EIFNGSVTG 267
+IF ++TG
Sbjct: 204 VLRLRGGMQIFVKTLTG 220
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 29/162 (17%)
Query: 116 NDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATS 175
+DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 2 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR------- 54
Query: 176 TTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFI 235
GM ++ V T G K I +EV SD + ++ ++Q +P D I
Sbjct: 55 -LRGGM-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLI 102
Query: 236 YKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+ ++D R+ +++ + T+ +IF ++TG
Sbjct: 103 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 144
>gi|145046250|ref|NP_001013290.2| ubiquitin [Danio rerio]
Length = 610
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|117558776|gb|AAI27396.1| Zgc:153686 [Danio rerio]
Length = 533
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + + G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL--------CLRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|402888113|ref|XP_003907421.1| PREDICTED: polyubiquitin-C isoform 11 [Papio anubis]
gi|402888115|ref|XP_003907422.1| PREDICTED: polyubiquitin-C isoform 12 [Papio anubis]
gi|426374649|ref|XP_004054182.1| PREDICTED: polyubiquitin-B-like isoform 1 [Gorilla gorilla gorilla]
gi|426374651|ref|XP_004054183.1| PREDICTED: polyubiquitin-B-like isoform 2 [Gorilla gorilla gorilla]
gi|426374653|ref|XP_004054184.1| PREDICTED: polyubiquitin-B-like isoform 3 [Gorilla gorilla gorilla]
gi|426374655|ref|XP_004054185.1| PREDICTED: polyubiquitin-B-like isoform 4 [Gorilla gorilla gorilla]
gi|426374657|ref|XP_004054186.1| PREDICTED: polyubiquitin-B-like isoform 5 [Gorilla gorilla gorilla]
gi|426374659|ref|XP_004054187.1| PREDICTED: polyubiquitin-B-like isoform 6 [Gorilla gorilla gorilla]
gi|426374661|ref|XP_004054188.1| PREDICTED: polyubiquitin-B-like isoform 7 [Gorilla gorilla gorilla]
gi|426374663|ref|XP_004054189.1| PREDICTED: polyubiquitin-B-like isoform 8 [Gorilla gorilla gorilla]
gi|426374665|ref|XP_004054190.1| PREDICTED: polyubiquitin-B-like isoform 9 [Gorilla gorilla gorilla]
gi|15928840|gb|AAH14880.1| UBC protein [Homo sapiens]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|9837286|gb|AAG00513.1|AF285162_1 polyubiquitin C [Mus musculus]
Length = 886
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 810 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++ R+ +++ + T+ +IF ++TG
Sbjct: 202 LEGGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+ R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEGGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ K+ + Q F KQ
Sbjct: 381 M-----QIFVKTLTG-KTITLEVEPSDTIENVKA---KIQDKEGISPDQQRLIFAGKQ-- 429
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 430 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 466
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GI +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 532
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 533 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 581
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 582 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 618
>gi|73995130|ref|XP_853060.1| PREDICTED: polyubiquitin-C isoform 2 [Canis lupus familiaris]
gi|149633339|ref|XP_001509120.1| PREDICTED: polyubiquitin-C [Ornithorhynchus anatinus]
gi|194214411|ref|XP_001499132.2| PREDICTED: polyubiquitin [Equus caballus]
gi|297263837|ref|XP_002798872.1| PREDICTED: hypothetical protein LOC712934 isoform 3 [Macaca
mulatta]
gi|344297276|ref|XP_003420325.1| PREDICTED: polyubiquitin-C-like [Loxodonta africana]
gi|345791301|ref|XP_003433478.1| PREDICTED: polyubiquitin-C isoform 1 [Canis lupus familiaris]
gi|390468353|ref|XP_003733926.1| PREDICTED: polyubiquitin-C-like [Callithrix jacchus]
gi|343958420|dbj|BAK63065.1| ubiquitin [Pan troglodytes]
gi|343959062|dbj|BAK63386.1| ubiquitin [Pan troglodytes]
gi|431912123|gb|ELK14261.1| Ubiquitin [Pteropus alecto]
Length = 381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|297263833|ref|XP_002798871.1| PREDICTED: hypothetical protein LOC712934 isoform 2 [Macaca
mulatta]
gi|297263835|ref|XP_001102090.2| PREDICTED: hypothetical protein LOC712934 isoform 1 [Macaca
mulatta]
gi|297263839|ref|XP_002798873.1| PREDICTED: hypothetical protein LOC712934 isoform 4 [Macaca
mulatta]
gi|297263841|ref|XP_002798874.1| PREDICTED: hypothetical protein LOC712934 isoform 5 [Macaca
mulatta]
gi|297263843|ref|XP_002798875.1| PREDICTED: hypothetical protein LOC712934 isoform 6 [Macaca
mulatta]
gi|297263845|ref|XP_002798876.1| PREDICTED: hypothetical protein LOC712934 isoform 7 [Macaca
mulatta]
gi|297263847|ref|XP_002798877.1| PREDICTED: hypothetical protein LOC712934 isoform 8 [Macaca
mulatta]
gi|297263849|ref|XP_002798878.1| PREDICTED: hypothetical protein LOC712934 isoform 9 [Macaca
mulatta]
gi|402888093|ref|XP_003907411.1| PREDICTED: polyubiquitin-C isoform 1 [Papio anubis]
gi|402888095|ref|XP_003907412.1| PREDICTED: polyubiquitin-C isoform 2 [Papio anubis]
gi|402888097|ref|XP_003907413.1| PREDICTED: polyubiquitin-C isoform 3 [Papio anubis]
gi|402888099|ref|XP_003907414.1| PREDICTED: polyubiquitin-C isoform 4 [Papio anubis]
gi|402888101|ref|XP_003907415.1| PREDICTED: polyubiquitin-C isoform 5 [Papio anubis]
gi|402888103|ref|XP_003907416.1| PREDICTED: polyubiquitin-C isoform 6 [Papio anubis]
gi|402888105|ref|XP_003907417.1| PREDICTED: polyubiquitin-C isoform 7 [Papio anubis]
gi|402888107|ref|XP_003907418.1| PREDICTED: polyubiquitin-C isoform 8 [Papio anubis]
gi|402888109|ref|XP_003907419.1| PREDICTED: polyubiquitin-C isoform 9 [Papio anubis]
gi|402888111|ref|XP_003907420.1| PREDICTED: polyubiquitin-C isoform 10 [Papio anubis]
gi|441630368|ref|XP_004089541.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630371|ref|XP_004089542.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
Length = 457
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|195170771|ref|XP_002026185.1| GL16204 [Drosophila persimilis]
gi|194111065|gb|EDW33108.1| GL16204 [Drosophila persimilis]
Length = 307
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|89891990|gb|ABD78847.1| ubiquitin C II [Anser anser]
Length = 271
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV SD + ++ ++Q
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQ 259
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIP 133
+K KI + E IP
Sbjct: 253 NVKAKIQDKEGIP 265
>gi|86515356|ref|NP_001034506.1| polyubiquitin [Tribolium castaneum]
gi|21314343|gb|AAM46898.1|AF506022_1 polyubiquitin [Tribolium castaneum]
Length = 685
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|28436485|gb|AAO43309.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 21 MQIFVKTLTGKTITLEVQSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 80
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 81 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 120
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 121 NVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 172
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 173 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQKRLIFAGKQ 221
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 222 LEDGRTLAVYNIQKESTL 239
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP ++ L+F G+ L+D R +
Sbjct: 173 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQKRLIFAGKQLEDGRTLAVYN 232
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 233 IQKESTLHLVL 243
>gi|357611679|gb|EHJ67605.1| Ubc protein [Danaus plexippus]
Length = 381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|321469467|gb|EFX80447.1| hypothetical protein DAPPUDRAFT_243700 [Daphnia pulex]
Length = 764
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
>gi|168005217|ref|XP_001755307.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693435|gb|EDQ79787.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|195399337|ref|XP_002058277.1| GJ16000 [Drosophila virilis]
gi|194150701|gb|EDW66385.1| GJ16000 [Drosophila virilis]
Length = 457
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|156358687|ref|XP_001624647.1| predicted protein [Nematostella vectensis]
gi|170055263|ref|XP_001863505.1| polyubiquitin [Culex quinquefasciatus]
gi|156211440|gb|EDO32547.1| predicted protein [Nematostella vectensis]
gi|167875249|gb|EDS38632.1| polyubiquitin [Culex quinquefasciatus]
Length = 533
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|443688720|gb|ELT91320.1| hypothetical protein CAPTEDRAFT_162204 [Capitella teleta]
Length = 457
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|388507280|gb|AFK41706.1| unknown [Medicago truncatula]
Length = 233
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLADYNI 213
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|375298514|dbj|BAL61084.1| polyubiqutin [Dianthus caryophyllus]
gi|375298516|dbj|BAL61085.1| polyubiquitin [Dianthus caryophyllus]
gi|375298518|dbj|BAL61086.1| polyubiquitin [Dianthus caryophyllus]
Length = 381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|323714263|ref|NP_001071272.2| ubuquitin c [Danio rerio]
Length = 533
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|320163196|gb|EFW40095.1| polyubiquitin 5 [Capsaspora owczarzaki ATCC 30864]
Length = 228
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|302756493|ref|XP_002961670.1| hypothetical protein SELMODRAFT_227280 [Selaginella moellendorffii]
gi|300170329|gb|EFJ36930.1| hypothetical protein SELMODRAFT_227280 [Selaginella moellendorffii]
Length = 687
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLADYNIQKESTL 675
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 680
>gi|223646766|gb|ACN10141.1| Ubiquitin [Salmo salar]
gi|223649344|gb|ACN11430.1| Ubiquitin [Salmo salar]
gi|223672621|gb|ACN12492.1| Ubiquitin [Salmo salar]
Length = 457
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|350537977|ref|NP_001232075.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
gi|197129056|gb|ACH45554.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
Length = 248
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|168043709|ref|XP_001774326.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674318|gb|EDQ60828.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 457
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>gi|148237866|ref|NP_001079589.1| Polyubiquitin-C-like [Xenopus laevis]
gi|27924422|gb|AAH45004.1| MGC53081 protein [Xenopus laevis]
gi|226469790|emb|CAX76725.1| ubiquitin C [Schistosoma japonicum]
gi|226473054|emb|CAX71213.1| ubiquitin C [Schistosoma japonicum]
Length = 380
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|18803|emb|CAA40323.1| polyubiquitin protein [Helianthus annuus]
Length = 334
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 34/216 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKEL 216
M ++ V T G K I +EV +SD + ++ ++
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKI 334
>gi|2627129|dbj|BAA23486.1| polyubiquitin [Homo sapiens]
Length = 609
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITXEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITXEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|334324804|ref|XP_001373422.2| PREDICTED: polyubiquitin-C-like [Monodelphis domestica]
Length = 761
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
>gi|426247174|ref|XP_004017361.1| PREDICTED: polyubiquitin-C-like isoform 1 [Ovis aries]
Length = 462
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI++ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKVKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|46359622|dbj|BAD15290.1| polyubiquitin [Crassostrea gigas]
Length = 685
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|391358178|sp|P0CG48.3|UBC_HUMAN RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|340068|gb|AAA36789.1| ubiquitin [Homo sapiens]
gi|2647408|dbj|BAA23632.1| polyubiquitin UbC [Homo sapiens]
gi|24657522|gb|AAH39193.1| Ubiquitin C [Homo sapiens]
gi|28316336|dbj|BAC56951.1| polyubiquitin C [Homo sapiens]
gi|440903539|gb|ELR54183.1| Polyubiquitin-C, partial [Bos grunniens mutus]
Length = 685
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|353231251|emb|CCD77669.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Length = 379
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 51/277 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + I VH
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQTEL-IVVH-------------- 145
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
R++++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 146 ENTRRMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 199
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 200 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 236
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 151 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 210
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 211 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 250
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 251 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 302
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 303 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 351
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 352 LEDGRTLSDYNIQKESTL 369
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 227 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 286
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 287 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 326
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 327 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 374
>gi|347966903|ref|XP_550846.3| AGAP001971-PA [Anopheles gambiae str. PEST]
gi|333469848|gb|EAL38503.3| AGAP001971-PA [Anopheles gambiae str. PEST]
Length = 1065
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 810 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 761 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 821 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 860
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 861 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 912
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 913 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 961
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 962 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 998
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 913 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 972
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 973 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 1012
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 1013 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1060
>gi|226477450|emb|CAX72419.1| polyubiquitin [Schistosoma japonicum]
Length = 245
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
>gi|195491528|ref|XP_002093599.1| GE18016 [Drosophila yakuba]
gi|194179700|gb|EDW93311.1| GE18016 [Drosophila yakuba]
Length = 317
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTE 82
I + S + L++ + + + E
Sbjct: 289 IQKESTLHLVLRXXXRSKTRRE 310
>gi|195403389|ref|XP_002060272.1| GJ16068 [Drosophila virilis]
gi|194140611|gb|EDW57085.1| GJ16068 [Drosophila virilis]
Length = 384
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|56753927|gb|AAW25156.1| SJCHGC00176 protein [Schistosoma japonicum]
Length = 457
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|1304128|dbj|BAA09860.1| polyubiquitin [Homo sapiens]
Length = 611
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+ + +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEGEPSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|24657014|ref|NP_728908.1| Ubiquitin-63E, isoform A [Drosophila melanogaster]
gi|24657019|ref|NP_523909.2| Ubiquitin-63E, isoform B [Drosophila melanogaster]
gi|45552935|ref|NP_995994.1| Ubiquitin-63E, isoform C [Drosophila melanogaster]
gi|442630045|ref|NP_001261383.1| Ubiquitin-63E, isoform D [Drosophila melanogaster]
gi|302595965|sp|P0CG69.1|UBIQP_DROME RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|23092947|gb|AAF47806.3| Ubiquitin-63E, isoform A [Drosophila melanogaster]
gi|23092948|gb|AAG22241.2| Ubiquitin-63E, isoform B [Drosophila melanogaster]
gi|45445791|gb|AAS64964.1| Ubiquitin-63E, isoform C [Drosophila melanogaster]
gi|440215267|gb|AGB94078.1| Ubiquitin-63E, isoform D [Drosophila melanogaster]
Length = 763
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
>gi|390176272|ref|XP_003736175.1| GA30006 [Drosophila pseudoobscura pseudoobscura]
gi|388858740|gb|EIM52248.1| GA30006 [Drosophila pseudoobscura pseudoobscura]
Length = 687
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|308512652|gb|ADO32981.1| polyubiquitin [Eriocheir sinensis]
gi|325556934|gb|ADZ28743.1| ubiquitin C [Eriocheir sinensis]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|296425005|ref|XP_002842034.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638291|emb|CAZ86225.1| unnamed protein product [Tuber melanosporum]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKGKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|226484872|emb|CAX79713.1| ubiquitin C [Schistosoma japonicum]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRMIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|256079430|ref|XP_002575990.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Length = 349
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 45 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 104
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 105 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 144
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 145 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 196
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 197 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 245
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 246 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 282
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 197 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 256
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 257 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 296
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 297 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 344
>gi|189441656|gb|AAI67447.1| Zgc:172187 protein [Danio rerio]
Length = 458
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>gi|149535948|ref|XP_001508553.1| PREDICTED: polyubiquitin-C-like [Ornithorhynchus anatinus]
gi|149641796|ref|XP_001508904.1| PREDICTED: polyubiquitin-C-like [Ornithorhynchus anatinus]
gi|301770987|ref|XP_002920911.1| PREDICTED: hypothetical protein LOC100483436 isoform 1 [Ailuropoda
melanoleuca]
gi|301770989|ref|XP_002920912.1| PREDICTED: hypothetical protein LOC100483436 isoform 2 [Ailuropoda
melanoleuca]
gi|197129062|gb|ACH45560.1| putative ubiquitin C variant 7 [Taeniopygia guttata]
gi|197129063|gb|ACH45561.1| putative ubiquitin C variant 7 [Taeniopygia guttata]
Length = 381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|213982779|ref|NP_001135561.1| uncharacterized protein LOC100216108 [Xenopus (Silurana)
tropicalis]
gi|126323857|ref|XP_001366753.1| PREDICTED: polyubiquitin [Monodelphis domestica]
gi|332254371|ref|XP_003276301.1| PREDICTED: polyubiquitin-C isoform 1 [Nomascus leucogenys]
gi|332254373|ref|XP_003276302.1| PREDICTED: polyubiquitin-C isoform 2 [Nomascus leucogenys]
gi|332254377|ref|XP_003276304.1| PREDICTED: polyubiquitin-C isoform 4 [Nomascus leucogenys]
gi|332254379|ref|XP_003276305.1| PREDICTED: polyubiquitin-C isoform 5 [Nomascus leucogenys]
gi|441630332|ref|XP_004089532.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630335|ref|XP_004089533.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630338|ref|XP_004089534.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630344|ref|XP_004089536.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630354|ref|XP_004089537.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630357|ref|XP_004089538.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630362|ref|XP_004089539.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630365|ref|XP_004089540.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|119618869|gb|EAW98463.1| ubiquitin C, isoform CRA_a [Homo sapiens]
gi|119618870|gb|EAW98464.1| ubiquitin C, isoform CRA_a [Homo sapiens]
gi|119618871|gb|EAW98465.1| ubiquitin C, isoform CRA_a [Homo sapiens]
gi|119618872|gb|EAW98466.1| ubiquitin C, isoform CRA_a [Homo sapiens]
gi|195539774|gb|AAI68051.1| Unknown (protein for MGC:185560) [Xenopus (Silurana) tropicalis]
gi|444434915|dbj|BAM77032.1| ubiquitin C [Homo sapiens]
Length = 533
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|149063232|gb|EDM13555.1| rCG21222, isoform CRA_a [Rattus norvegicus]
gi|149063234|gb|EDM13557.1| rCG21222, isoform CRA_a [Rattus norvegicus]
Length = 278
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
M ++ V T G K I ++V S N ++++E
Sbjct: 229 M-----QIFVKTLTG-KTITLDVEPSVNTKKVKQE 257
>gi|7267292|emb|CAB81074.1| polyubiquitin (ubq10) [Arabidopsis thaliana]
Length = 464
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 381 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 411
>gi|302393781|sp|P62976.2|UBIQP_CRIGR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related 1; Contains:
RecName: Full=Ubiquitin-related 2; Flags: Precursor
gi|940395|dbj|BAA09853.1| polyubiquitin [Cricetulus sp.]
Length = 658
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + + IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
M ++ V T G K I +EV S+ + + ++E
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSNTIKKSKQE 637
>gi|444434921|dbj|BAM77035.1| ubiquitin C [Homo sapiens]
Length = 685
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|3603456|gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 37 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 96
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 97 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 136
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 137 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 188
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 189 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 237
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 238 LEDGRTLADYNIQKESTL 255
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 113 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 172
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 173 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 212
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 213 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 260
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 41 QTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNS 100
Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT--------------G 46
Query: 101 KTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDN 160
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D +
Sbjct: 47 KT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 100
Query: 161 AEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLH 220
+ + + +R GM ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 101 STLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE 146
Query: 221 QRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+P D I+ ++D R+ +++ + T+ +IF ++TG
Sbjct: 147 -----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 198
>gi|24640086|ref|NP_727078.1| Ubiquitin-5E [Drosophila melanogaster]
gi|194896187|ref|XP_001978429.1| GG17684 [Drosophila erecta]
gi|22831806|gb|AAF46142.3| Ubiquitin-5E [Drosophila melanogaster]
gi|190650078|gb|EDV47356.1| GG17684 [Drosophila erecta]
gi|208879484|gb|ACI31287.1| GH17761p [Drosophila melanogaster]
Length = 534
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|55742507|ref|NP_001006688.1| ubiquitin C [Xenopus (Silurana) tropicalis]
gi|297693402|ref|XP_002824008.1| PREDICTED: polyubiquitin-C isoform 1 [Pongo abelii]
gi|297693404|ref|XP_002824009.1| PREDICTED: polyubiquitin-C isoform 2 [Pongo abelii]
gi|297693406|ref|XP_002824010.1| PREDICTED: polyubiquitin-C isoform 3 [Pongo abelii]
gi|297693408|ref|XP_002824011.1| PREDICTED: polyubiquitin-C isoform 4 [Pongo abelii]
gi|297693416|ref|XP_002824015.1| PREDICTED: polyubiquitin-C isoform 8 [Pongo abelii]
gi|297693418|ref|XP_002824016.1| PREDICTED: polyubiquitin-C isoform 9 [Pongo abelii]
gi|297693420|ref|XP_002824017.1| PREDICTED: polyubiquitin-C isoform 10 [Pongo abelii]
gi|395745069|ref|XP_003778208.1| PREDICTED: polyubiquitin-C [Pongo abelii]
gi|302595941|sp|P0CG66.1|UBC_GORGO RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|28316340|dbj|BAC56953.1| polyubiquitin C [Gorilla gorilla]
gi|49257812|gb|AAH74652.1| ubiquitin C [Xenopus (Silurana) tropicalis]
gi|89271842|emb|CAJ82066.1| novel protein [Xenopus (Silurana) tropicalis]
gi|444434923|dbj|BAM77036.1| ubiquitin C [Homo sapiens]
Length = 609
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|389608337|dbj|BAM17780.1| ubiquitin [Papilio xuthus]
Length = 306
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|226477470|emb|CAX72429.1| ubiquitin C [Schistosoma japonicum]
gi|226477472|emb|CAX72430.1| ubiquitin C [Schistosoma japonicum]
gi|226477474|emb|CAX72431.1| ubiquitin C [Schistosoma japonicum]
gi|226477476|emb|CAX72432.1| ubiquitin C [Schistosoma japonicum]
gi|226477478|emb|CAX72433.1| ubiquitin C [Schistosoma japonicum]
gi|226477480|emb|CAX72434.1| ubiquitin C [Schistosoma japonicum]
gi|226484001|emb|CAX79669.1| ubiquitin C [Schistosoma japonicum]
gi|226484003|emb|CAX79670.1| ubiquitin C [Schistosoma japonicum]
gi|226484055|emb|CAX79696.1| ubiquitin C [Schistosoma japonicum]
gi|226484057|emb|CAX79697.1| ubiquitin C [Schistosoma japonicum]
gi|226484059|emb|CAX79698.1| ubiquitin C [Schistosoma japonicum]
gi|226484063|emb|CAX79700.1| ubiquitin C [Schistosoma japonicum]
gi|226484065|emb|CAX79701.1| ubiquitin C [Schistosoma japonicum]
gi|226484067|emb|CAX79702.1| ubiquitin C [Schistosoma japonicum]
gi|226484069|emb|CAX79703.1| ubiquitin C [Schistosoma japonicum]
gi|226484071|emb|CAX79704.1| ubiquitin C [Schistosoma japonicum]
gi|226484073|emb|CAX79705.1| ubiquitin C [Schistosoma japonicum]
gi|226484075|emb|CAX79706.1| ubiquitin C [Schistosoma japonicum]
gi|226484077|emb|CAX79707.1| ubiquitin C [Schistosoma japonicum]
gi|226484079|emb|CAX79708.1| ubiquitin C [Schistosoma japonicum]
gi|226484083|emb|CAX79710.1| ubiquitin C [Schistosoma japonicum]
gi|226484311|emb|CAX79711.1| ubiquitin C [Schistosoma japonicum]
gi|226484870|emb|CAX79712.1| ubiquitin C [Schistosoma japonicum]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|195448336|ref|XP_002071613.1| GK10077 [Drosophila willistoni]
gi|194167698|gb|EDW82599.1| GK10077 [Drosophila willistoni]
Length = 610
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|197129051|gb|ACH45549.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E I ++ + +G +L+D R+L D + + + VR
Sbjct: 253 NVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKELTLHLVVR 300
>gi|195011548|ref|XP_001983203.1| GH15714 [Drosophila grimshawi]
gi|193896685|gb|EDV95551.1| GH15714 [Drosophila grimshawi]
Length = 535
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|194762588|ref|XP_001963416.1| GF20300 [Drosophila ananassae]
gi|190629075|gb|EDV44492.1| GF20300 [Drosophila ananassae]
gi|389610665|dbj|BAM18944.1| ubiquitin [Papilio polytes]
Length = 610
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|350537449|ref|NP_001232759.1| putative ubiquitin C variant 5 [Taeniopygia guttata]
gi|350537609|ref|NP_001232766.1| putative ubiquitin C variant 14 [Taeniopygia guttata]
gi|291404973|ref|XP_002718831.1| PREDICTED: ubiquitin B-like [Oryctolagus cuniculus]
gi|344297907|ref|XP_003420637.1| PREDICTED: polyubiquitin-B-like [Loxodonta africana]
gi|410979979|ref|XP_003996358.1| PREDICTED: polyubiquitin-B isoform 1 [Felis catus]
gi|410979981|ref|XP_003996359.1| PREDICTED: polyubiquitin-B isoform 2 [Felis catus]
gi|302595871|sp|P0CG53.1|UBB_BOVIN RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|89994036|gb|AAI14002.1| Polyubiquitin [Bos taurus]
gi|197129050|gb|ACH45548.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
gi|197129061|gb|ACH45559.1| putative ubiquitin C variant 5 [Taeniopygia guttata]
gi|197129064|gb|ACH45562.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
gi|197129068|gb|ACH45566.1| putative ubiquitin C variant 14 [Taeniopygia guttata]
gi|296476687|tpg|DAA18802.1| TPA: polyubiquitin [Bos taurus]
Length = 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|452824412|gb|EME31415.1| ubiquitin [Galdieria sulphuraria]
Length = 229
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|327291982|ref|XP_003230699.1| PREDICTED: polyubiquitin-C-like [Anolis carolinensis]
Length = 685
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|302762631|ref|XP_002964737.1| hypothetical protein SELMODRAFT_270468 [Selaginella moellendorffii]
gi|300166970|gb|EFJ33575.1| hypothetical protein SELMODRAFT_270468 [Selaginella moellendorffii]
Length = 535
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLADYNIQKESTL 523
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 528
>gi|195042539|ref|XP_001991451.1| GH12661 [Drosophila grimshawi]
gi|193901209|gb|EDW00076.1| GH12661 [Drosophila grimshawi]
Length = 699
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 532
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 533 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 581
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 582 LEDGRTLSDYNI 593
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNS 65
I + S
Sbjct: 593 IQKES 597
>gi|168005465|ref|XP_001755431.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693559|gb|EDQ79911.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|38114661|gb|AAH08955.2| UBC protein, partial [Homo sapiens]
Length = 546
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 14 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 73
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 74 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 113
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 114 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 165
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 166 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 214
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 215 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 251
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 166 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 226 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 265
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 266 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 317
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 318 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 366
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 367 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 403
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 318 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 377
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 378 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 417
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 418 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 469
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 470 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 518
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 519 LEDGRTLSDYNIQKESTL 536
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 394 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 453
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 454 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 493
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 494 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 541
>gi|157420221|gb|ABV55648.1| Ubc protein, partial [Penaeus monodon]
Length = 432
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 52 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 111
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 112 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 151
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 152 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 203
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 204 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 252
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 253 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 289
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 204 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 263
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 264 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 303
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 304 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 355
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 356 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 404
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 405 LEDGRTLSDYNI 416
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 112/252 (44%), Gaps = 49/252 (19%)
Query: 26 IKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSS 85
+K KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+ ++
Sbjct: 1 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV-KTL 59
Query: 86 PSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAE 145
K I L++ PS DT+ +K KI + E IP ++ + +G +
Sbjct: 60 TGKTITLEVE-PS------------------DTIENVKAKIQDKEGIPPDQQRLIFAGKQ 100
Query: 146 LQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNA 205
L+D R+L D + + + + +R GM ++ V T G K I +EV
Sbjct: 101 LEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVEP 146
Query: 206 SDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI------- 258
SD + ++ ++Q +P D I+ ++D R+ +++ + T+
Sbjct: 147 SDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 201
Query: 259 ---EIFNGSVTG 267
+IF ++TG
Sbjct: 202 GGMQIFVKTLTG 213
>gi|51873890|gb|AAH80583.1| Unknown (protein for IMAGE:2822684), partial [Homo sapiens]
Length = 698
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 14 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 73
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 74 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 113
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 114 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 165
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 166 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 214
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 215 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 251
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 166 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 226 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 265
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 266 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 317
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 318 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 366
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 367 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 403
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 318 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 377
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 378 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 417
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 418 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 469
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 470 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 518
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 519 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 555
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 470 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 529
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 530 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 569
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 570 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 621
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 622 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 670
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 671 LEDGRTLSDYNIQKESTL 688
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 546 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 605
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 606 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 645
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 646 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 693
>gi|432899994|ref|XP_004076672.1| PREDICTED: polyubiquitin-C-like [Oryzias latipes]
Length = 533
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|410976446|ref|XP_003994631.1| PREDICTED: polyubiquitin-B-like [Felis catus]
Length = 229
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI++ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|226477448|emb|CAX72418.1| ubiquitin C [Schistosoma japonicum]
gi|226484005|emb|CAX79671.1| ubiquitin C [Schistosoma japonicum]
Length = 381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|221048065|gb|ACL98140.1| ubiquitin C variant [Epinephelus coioides]
Length = 255
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 34/213 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
M ++ V T G K I +EV SD + ++
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEPSDTIENVK 255
>gi|194749344|ref|XP_001957099.1| GF10254 [Drosophila ananassae]
gi|190624381|gb|EDV39905.1| GF10254 [Drosophila ananassae]
Length = 837
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 810 LEDGRTLSDYNIQKESTL 827
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 685 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 745 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 784
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 832
>gi|158256510|dbj|BAF84228.1| unnamed protein product [Homo sapiens]
Length = 609
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV S + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSATIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV T+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSATIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|444434917|dbj|BAM77033.1| ubiquitin C [Homo sapiens]
Length = 685
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPCDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|118370592|ref|XP_001018497.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300264|gb|EAR98252.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 384
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+++ DT+ IK KI+ +GIP +Q L+F G+ L D R V+
Sbjct: 153 MQIFVKTLTGKTVTLDIEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD+D DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------VTLDLDPCDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKERIPPDQQRLIFAGKQLDDSRTLSDYNIQRESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFSGKC 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R +++ + T+
Sbjct: 354 LEDTRKLTDYNIQKESTL 371
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+ D++ ++K KI+ +GIP +Q L+F G+ L D R +
Sbjct: 1 MQIFVKTLTGKTITLNTEVSDSIQDVKAKIQDKEGIPPDQQRLIFAGKQLDDGRSLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ DTV
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------VTLDLEPCDTVE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K + +++ ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTVTLDIEASDTIENIKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+DD R+ + +++ + T+ +IF ++TG
Sbjct: 202 LDDGRTVQDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+++ DTV +K KI+ +GIP +Q L+F G+ L D R +
Sbjct: 77 MQIFVKTLTGKTVTLDLEPCDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------VTLDIEASDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L D R+++D + + + + +R G
Sbjct: 177 NIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K + ++++ D + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTVTLDLDPCDTIENVKAKIQDKE-----RIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+DD R+ +++ + T+ +IF ++TG
Sbjct: 278 LDDSRTLSDYNIQRESTLHLVLRLRGGMQIFVKTLTG 314
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+++ DT+ +K KI+ + IP +Q L+F G+ L D R +
Sbjct: 229 MQIFVKTLTGKTVTLDLDPCDTIENVKAKIQDKERIPPDQQRLIFAGKQLDDSRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 289 IQRESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + SG L+D R L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFSGKCLEDTRKLTDYNIQKESTLHLVLR 376
>gi|168024852|ref|XP_001764949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683758|gb|EDQ70165.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 318
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|157138589|ref|XP_001664267.1| ubiquitin [Aedes aegypti]
gi|241694258|ref|XP_002402192.1| ubiquitin/40S ribosomal protein S27A fusion, putative [Ixodes
scapularis]
gi|108880555|gb|EAT44780.1| AAEL003877-PB [Aedes aegypti]
gi|215504684|gb|EEC14178.1| ubiquitin/40S ribosomal protein S27A fusion, putative [Ixodes
scapularis]
Length = 609
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|208022675|ref|NP_001129078.1| polyubiquitin-C [Pan troglodytes]
gi|302595944|sp|P0CG64.1|UBC_PANTR RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595946|sp|P0CG61.1|UBC_PONPY RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|28316338|dbj|BAC56952.1| polyubiquitin C [Pan troglodytes]
gi|28316342|dbj|BAC56954.1| polyubiquitin C [Pongo pygmaeus]
Length = 761
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
>gi|410914740|ref|XP_003970845.1| PREDICTED: polyubiquitin-B-like isoform 1 [Takifugu rubripes]
gi|410914742|ref|XP_003970846.1| PREDICTED: polyubiquitin-B-like isoform 2 [Takifugu rubripes]
gi|221222312|gb|ACM09817.1| Ubiquitin [Salmo salar]
gi|334362439|gb|AEG78418.1| Ubiquitin C variant 2 [Epinephelus coioides]
Length = 305
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|195164963|ref|XP_002023315.1| GL20284 [Drosophila persimilis]
gi|194105420|gb|EDW27463.1| GL20284 [Drosophila persimilis]
Length = 382
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|148235355|ref|NP_001080865.1| ubiquitin C [Xenopus laevis]
gi|32766481|gb|AAH54976.1| Ubc-prov protein [Xenopus laevis]
Length = 609
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|157138587|ref|XP_001664266.1| ubiquitin [Aedes aegypti]
gi|108880554|gb|EAT44779.1| AAEL003877-PA [Aedes aegypti]
Length = 761
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
>gi|270010560|gb|EFA07008.1| hypothetical protein TcasGA2_TC009978 [Tribolium castaneum]
Length = 685
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|62089150|dbj|BAD93019.1| ubiquitin C variant [Homo sapiens]
Length = 1309
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 17 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 76
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 77 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 116
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 117 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 168
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 169 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 217
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 218 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 254
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 169 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 228
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 229 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 268
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 269 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 320
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 321 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 369
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 370 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 406
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 321 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 380
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 381 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 420
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 421 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 472
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 473 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 521
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 522 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 558
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 473 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 532
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 533 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 572
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 573 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 624
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 625 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 673
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 674 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 710
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 625 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 684
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 685 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 724
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 725 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 776
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 777 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 825
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 826 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 862
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 777 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 836
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 837 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 876
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 877 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 928
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 929 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 977
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 978 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 1014
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 929 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 988
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 989 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 1028
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 1029 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 1080
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 1081 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 1129
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 1130 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 1166
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1081 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 1140
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 1141 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 1180
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 1181 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 1232
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 1233 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 1281
Query: 241 MDDDRSFRWHHVGQGDTI 258
+++ R+ +++ + T+
Sbjct: 1282 LENGRTLSDYNIQKESTL 1299
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 1216
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 1217 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 1256
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L++ R+L D + + + + +R
Sbjct: 1257 NVKAKIQDKEGIPPDQQRLIFAGKQLENGRTLSDYNIQKESTLHLVLR 1304
>gi|170034793|ref|XP_001845257.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876387|gb|EDS39770.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1065
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 810 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 761 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 821 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 860
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 861 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 912
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 913 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 961
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 962 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 998
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 913 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 972
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 973 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 1012
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 1013 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1060
>gi|168062150|ref|XP_001783045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665429|gb|EDQ52114.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|4105408|gb|AAD02414.1| polyubiquitin [Schistosoma mansoni]
Length = 295
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 68 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 127
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 128 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 167
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 168 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 219
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 220 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 268
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 269 LEDGRTLSDYNIQKESTL 286
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 1 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 60
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ ++ K I L++ PS DT+ +K KI +
Sbjct: 61 VLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIENVKAKIQDK 100
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 101 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 147
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV SD + ++ ++Q +P D I+ ++D R+
Sbjct: 148 VKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 201
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 202 YNIQKESTLHLVLRLRGGMQIFVKTLTG 229
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 144 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 203
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 204 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 243
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 244 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 291
>gi|340058|gb|AAA36787.1| ubiquitin precursor, partial [Homo sapiens]
Length = 269
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 41 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 100
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 101 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 140
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 141 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 192
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 193 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 241
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 242 LEDGRTLSDYNIQKESTL 259
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 117 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 176
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 177 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 216
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 217 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 264
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 49/241 (20%)
Query: 37 PVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINI 96
P +Q L+F G+ L+D R + I + S + L++ Q+ ++ K I L++
Sbjct: 1 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE- 58
Query: 97 PSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCE 156
PS DT+ +K KI + E IP ++ + +G +L+D R+L D
Sbjct: 59 PS------------------DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 100
Query: 157 LMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKEL 216
+ + + + +R GM ++ V T G K I +EV SD + ++ ++
Sbjct: 101 IQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVEPSDTIENVKAKI 146
Query: 217 QKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVT 266
Q +P D I+ ++D R+ +++ + T+ +IF ++T
Sbjct: 147 QDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 201
Query: 267 G 267
G
Sbjct: 202 G 202
>gi|413926510|gb|AFW66442.1| putative ubiquitin family protein, partial [Zea mays]
Length = 216
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLADYNI 213
>gi|323448851|gb|EGB04744.1| ubiquitin [Aureococcus anophagefferens]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 121/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDTIDNVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|363992286|gb|AEW46688.1| polyubiquitin, partial [Ulva linza]
Length = 226
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|289740633|gb|ADD19064.1| ubiquitin/40S ribosomal protein S27a fusion protein [Glossina
morsitans morsitans]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|195469924|ref|XP_002099886.1| GE16472 [Drosophila yakuba]
gi|194187410|gb|EDX00994.1| GE16472 [Drosophila yakuba]
Length = 230
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|194866181|ref|XP_001971796.1| GG14240 [Drosophila erecta]
gi|190653579|gb|EDV50822.1| GG14240 [Drosophila erecta]
Length = 991
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 810 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 761 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 821 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 860
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 861 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 912
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 913 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 961
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 962 LEDGRTLSDYNIQKESTL 979
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 837 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 896
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 897 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 936
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 937 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 984
>gi|224065086|ref|XP_002301663.1| predicted protein [Populus trichocarpa]
gi|222843389|gb|EEE80936.1| predicted protein [Populus trichocarpa]
Length = 305
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLADYNIQKESTL 295
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGSTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|291413653|ref|XP_002723083.1| PREDICTED: ubiquitin B [Oryctolagus cuniculus]
gi|55977015|gb|AAV68344.1| ubiquitin C splice variant [Homo sapiens]
gi|357610605|gb|EHJ67056.1| putative ubiquitin C variant 2 [Danaus plexippus]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|21429768|gb|AAM50562.1| AT20865p [Drosophila melanogaster]
Length = 1067
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 810 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 761 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 821 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 860
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 861 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 912
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 913 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 961
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 962 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 998
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 913 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 972
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 973 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 1012
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 1013 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1060
>gi|66358028|ref|XP_626192.1| polyubiquitin with 3 Ub domains [Cryptosporidium parvum Iowa II]
gi|46227264|gb|EAK88214.1| polyubiquitin with 3 Ub domains [Cryptosporidium parvum Iowa II]
Length = 241
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 13 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 72
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 73 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 112
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 113 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 164
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 165 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 213
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 214 LEDGRTLSDYNIQKESTL 231
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 89 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 148
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 149 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 188
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 189 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 236
>gi|163573|gb|AAA30719.1| polyubiquitin, partial [Bos taurus]
Length = 245
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 71
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 72 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 111
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 112 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 163
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 164 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 212
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 213 LEDGRTLSDYNIQKESTL 230
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 88 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 147
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 148 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 187
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 188 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 235
>gi|30060222|gb|AAP13102.1| polyubiquitin, partial [Schistosoma japonicum]
Length = 340
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV SD + ++ ++Q
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQ 335
>gi|357440433|ref|XP_003590494.1| Ubiquitin [Medicago truncatula]
gi|355479542|gb|AES60745.1| Ubiquitin [Medicago truncatula]
Length = 312
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLL 70
I + S + L+
Sbjct: 213 IQKESTLHLV 222
>gi|297809725|ref|XP_002872746.1| hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp.
lyrata]
gi|297809771|ref|XP_002872769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318583|gb|EFH49005.1| hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp.
lyrata]
gi|297318606|gb|EFH49028.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPLDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP+++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|226484007|emb|CAX79672.1| ubiquitin C [Schistosoma japonicum]
Length = 381
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYHIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|443713356|gb|ELU06246.1| hypothetical protein CAPTEDRAFT_186294 [Capitella teleta]
Length = 231
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 39/266 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTIEIFNGSVT 266
++D R+ +++ + T+ + +T
Sbjct: 202 LEDGRTLSDYNIQKESTLHLCQRQLT 227
>gi|302822663|ref|XP_002992988.1| hypothetical protein SELMODRAFT_187148 [Selaginella moellendorffii]
gi|302825886|ref|XP_002994514.1| hypothetical protein SELMODRAFT_138728 [Selaginella moellendorffii]
gi|300137505|gb|EFJ04422.1| hypothetical protein SELMODRAFT_138728 [Selaginella moellendorffii]
gi|300139188|gb|EFJ05934.1| hypothetical protein SELMODRAFT_187148 [Selaginella moellendorffii]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|197129055|gb|ACH45553.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
gi|197129057|gb|ACH45555.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
Length = 412
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G + I +EV SD + ++ ++Q
Sbjct: 305 M-----QIFVKTLTG-RTITLEVEPSDTIENVKAKIQ 335
>gi|195137906|ref|XP_002012597.1| GI14272 [Drosophila mojavensis]
gi|193906411|gb|EDW05278.1| GI14272 [Drosophila mojavensis]
Length = 668
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|12833702|dbj|BAB22630.1| unnamed protein product [Mus musculus]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|164708|gb|AAA31133.1| poly-ubiquitin precursor, partial [Sus scrofa]
Length = 255
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 27 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 86
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 87 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 126
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 127 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 178
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 179 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 227
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 228 LEDGRTLSDYNIQKESTL 245
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 103 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 162
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 163 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 202
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 203 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 250
>gi|226477454|emb|CAX72421.1| ubiquitin C [Schistosoma japonicum]
gi|226477456|emb|CAX72422.1| ubiquitin C [Schistosoma japonicum]
gi|226477458|emb|CAX72423.1| ubiquitin C [Schistosoma japonicum]
gi|226477460|emb|CAX72424.1| ubiquitin C [Schistosoma japonicum]
gi|226477462|emb|CAX72425.1| ubiquitin C [Schistosoma japonicum]
gi|226477464|emb|CAX72426.1| ubiquitin C [Schistosoma japonicum]
gi|226484015|emb|CAX79676.1| ubiquitin C [Schistosoma japonicum]
gi|226484017|emb|CAX79677.1| ubiquitin C [Schistosoma japonicum]
gi|226484019|emb|CAX79678.1| ubiquitin C [Schistosoma japonicum]
gi|226484021|emb|CAX79679.1| ubiquitin C [Schistosoma japonicum]
gi|226484023|emb|CAX79680.1| ubiquitin C [Schistosoma japonicum]
gi|226484027|emb|CAX79682.1| ubiquitin C [Schistosoma japonicum]
gi|226484029|emb|CAX79683.1| ubiquitin C [Schistosoma japonicum]
gi|226484031|emb|CAX79684.1| ubiquitin C [Schistosoma japonicum]
gi|226484033|emb|CAX79685.1| ubiquitin C [Schistosoma japonicum]
gi|226484035|emb|CAX79686.1| ubiquitin C [Schistosoma japonicum]
gi|226484037|emb|CAX79687.1| ubiquitin C [Schistosoma japonicum]
gi|226484039|emb|CAX79688.1| ubiquitin C [Schistosoma japonicum]
gi|226484041|emb|CAX79689.1| ubiquitin C [Schistosoma japonicum]
gi|226484043|emb|CAX79690.1| ubiquitin C [Schistosoma japonicum]
gi|226484045|emb|CAX79691.1| ubiquitin C [Schistosoma japonicum]
gi|226484049|emb|CAX79693.1| ubiquitin C [Schistosoma japonicum]
gi|226484051|emb|CAX79694.1| ubiquitin C [Schistosoma japonicum]
gi|226484053|emb|CAX79695.1| ubiquitin C [Schistosoma japonicum]
gi|226484081|emb|CAX79709.1| ubiquitin C [Schistosoma japonicum]
gi|443725027|gb|ELU12769.1| hypothetical protein CAPTEDRAFT_192594 [Capitella teleta]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|357137122|ref|XP_003570150.1| PREDICTED: polyubiquitin 11-like [Brachypodium distachyon]
Length = 241
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|67616274|ref|XP_667472.1| ubiquitin B [Cryptosporidium hominis TU502]
gi|54658618|gb|EAL37248.1| ubiquitin B [Cryptosporidium hominis]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|11024714|ref|NP_061828.1| polyubiquitin-B precursor [Homo sapiens]
gi|57114099|ref|NP_001009117.1| polyubiquitin-B [Pan troglodytes]
gi|157427740|ref|NP_001098779.1| ubiquitin [Sus scrofa]
gi|302563653|ref|NP_001181737.1| polyubiquitin-B [Macaca mulatta]
gi|109113442|ref|XP_001087796.1| PREDICTED: ubiquitin D-like isoform 1 [Macaca mulatta]
gi|109113444|ref|XP_001088043.1| PREDICTED: ubiquitin D-like isoform 3 [Macaca mulatta]
gi|109113446|ref|XP_001087919.1| PREDICTED: ubiquitin D-like isoform 2 [Macaca mulatta]
gi|296201638|ref|XP_002748114.1| PREDICTED: polyubiquitin-B-like isoform 1 [Callithrix jacchus]
gi|296201640|ref|XP_002748115.1| PREDICTED: polyubiquitin-B-like isoform 2 [Callithrix jacchus]
gi|296201642|ref|XP_002748116.1| PREDICTED: polyubiquitin-B-like isoform 3 [Callithrix jacchus]
gi|297272002|ref|XP_002800358.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
gi|297272004|ref|XP_002800359.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
gi|297272006|ref|XP_002800360.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
gi|297272009|ref|XP_002800361.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
gi|297700142|ref|XP_002827118.1| PREDICTED: polyubiquitin-B isoform 2 [Pongo abelii]
gi|301617759|ref|XP_002938289.1| PREDICTED: ubiquitin D isoform 1 [Xenopus (Silurana) tropicalis]
gi|301617761|ref|XP_002938290.1| PREDICTED: ubiquitin D isoform 2 [Xenopus (Silurana) tropicalis]
gi|332226973|ref|XP_003262663.1| PREDICTED: polyubiquitin-B isoform 2 [Nomascus leucogenys]
gi|332267429|ref|XP_003282687.1| PREDICTED: polyubiquitin-B-like isoform 2 [Nomascus leucogenys]
gi|332267433|ref|XP_003282689.1| PREDICTED: polyubiquitin-B-like isoform 4 [Nomascus leucogenys]
gi|348560904|ref|XP_003466253.1| PREDICTED: polyubiquitin-B-like [Cavia porcellus]
gi|390463130|ref|XP_003732975.1| PREDICTED: polyubiquitin-B-like [Callithrix jacchus]
gi|395748608|ref|XP_003778797.1| PREDICTED: polyubiquitin-B [Pongo abelii]
gi|426349328|ref|XP_004042260.1| PREDICTED: polyubiquitin-B isoform 1 [Gorilla gorilla gorilla]
gi|426349330|ref|XP_004042261.1| PREDICTED: polyubiquitin-B isoform 2 [Gorilla gorilla gorilla]
gi|426349332|ref|XP_004042262.1| PREDICTED: polyubiquitin-B isoform 3 [Gorilla gorilla gorilla]
gi|426349334|ref|XP_004042263.1| PREDICTED: polyubiquitin-B isoform 4 [Gorilla gorilla gorilla]
gi|426349336|ref|XP_004042264.1| PREDICTED: polyubiquitin-B isoform 5 [Gorilla gorilla gorilla]
gi|426349338|ref|XP_004042265.1| PREDICTED: polyubiquitin-B isoform 6 [Gorilla gorilla gorilla]
gi|426349340|ref|XP_004042266.1| PREDICTED: polyubiquitin-B isoform 7 [Gorilla gorilla gorilla]
gi|441661901|ref|XP_004091551.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
gi|441661906|ref|XP_004091552.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
gi|441661909|ref|XP_004091553.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
gi|441678730|ref|XP_004092833.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
gi|441678733|ref|XP_004092834.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
gi|441678738|ref|XP_004092835.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
gi|302595874|sp|P0CG67.1|UBB_GORGO RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595875|sp|P0CG47.1|UBB_HUMAN RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595877|sp|P0CG65.1|UBB_PANTR RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595878|sp|P0CG60.1|UBB_PONPY RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|6647298|emb|CAA28495.1| ubiquitin [Homo sapiens]
gi|12653221|gb|AAH00379.1| Ubiquitin B [Homo sapiens]
gi|14424552|gb|AAH09301.1| Ubiquitin B [Homo sapiens]
gi|15451313|dbj|BAB64460.1| hypothetical protein [Macaca fascicularis]
gi|15929389|gb|AAH15127.1| Ubiquitin B [Homo sapiens]
gi|20070823|gb|AAH26301.1| Ubiquitin B [Homo sapiens]
gi|21410249|gb|AAH31027.1| Ubiquitin B [Homo sapiens]
gi|28278206|gb|AAH46123.1| Ubiquitin B [Homo sapiens]
gi|28316344|dbj|BAC56955.1| polyubiquitin B [Homo sapiens]
gi|28316346|dbj|BAC56956.1| polyubiquitin B [Pongo pygmaeus]
gi|28316348|dbj|BAC56957.1| polyubiquitin B [Pan troglodytes]
gi|28316350|dbj|BAC56958.1| polyubiquitin B [Gorilla gorilla]
gi|54697070|gb|AAV38907.1| ubiquitin B [Homo sapiens]
gi|54887368|gb|AAH38999.1| Ubiquitin B [Homo sapiens]
gi|61355410|gb|AAX41137.1| ubiquitin B [synthetic construct]
gi|61359496|gb|AAX41727.1| ubiquitin B [synthetic construct]
gi|119624906|gb|EAX04501.1| ubiquitin B, isoform CRA_a [Homo sapiens]
gi|119624907|gb|EAX04502.1| ubiquitin B, isoform CRA_a [Homo sapiens]
gi|156105183|gb|ABU49130.1| ubiquitin B [Sus scrofa]
gi|156105185|gb|ABU49131.1| ubiquitin B [Sus scrofa]
gi|281339566|gb|EFB15150.1| hypothetical protein PANDA_009728 [Ailuropoda melanoleuca]
gi|343958162|dbj|BAK62936.1| ubiquitin [Pan troglodytes]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|449479809|ref|XP_004177054.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Taeniopygia
guttata]
Length = 534
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 111/253 (43%), Gaps = 41/253 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCX------ 230
Query: 181 MGPRKLKLLVLTQC-GNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQN 239
VL C K I +EV SD + ++ ++Q +P D I+
Sbjct: 231 ---------VLPLCMTGKTITLEVELSDTIENVKAKIQDKE-----GIPPDSRXLIFAGK 276
Query: 240 VMDDDRSFRWHHV 252
++D R+F +++
Sbjct: 277 QLEDGRTFSDYNI 289
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 39/249 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 315 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 374
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ ++ K I L++ PS DT+ +K KI +
Sbjct: 375 VLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIENVKAKIQDK 414
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 415 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 461
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV SD + ++ ++Q +P D I+ ++D R+
Sbjct: 462 VKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 515
Query: 250 HHVGQGDTI 258
+++ + T+
Sbjct: 516 YNIQKESTL 524
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 48/268 (17%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP + L+F G+ L+D R + IQ
Sbjct: 238 GKTITLEVELSDTIENVKAKIQDKEGIPPDSRXLIFAGKQLEDGR------TFSDYNIQK 291
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
+ ++ + +Q +I +K KT + L+++ +DT+ +K KI +
Sbjct: 292 VAVAETSVCLSGQQW----QIFVKT---LTGKT------ITLEVEPSDTIENVKAKIQDK 338
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 339 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 385
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV SD + ++ ++Q +P D I+ ++D R+
Sbjct: 386 VKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 439
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 440 YNIQKESTLHLVLRLRGGMQIFVKTLTG 467
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 382 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 441
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 442 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 481
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 482 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 529
>gi|213510698|ref|NP_001133175.1| polyubiquitin [Salmo salar]
gi|350534516|ref|NP_001232808.1| uncharacterized protein LOC100228572 [Taeniopygia guttata]
gi|118098426|ref|XP_415105.2| PREDICTED: polyubiquitin-B isoform 2 [Gallus gallus]
gi|118098428|ref|XP_001233377.1| PREDICTED: polyubiquitin-B isoform 1 [Gallus gallus]
gi|432884643|ref|XP_004074520.1| PREDICTED: polyubiquitin-B-like isoform 1 [Oryzias latipes]
gi|432884645|ref|XP_004074521.1| PREDICTED: polyubiquitin-B-like isoform 2 [Oryzias latipes]
gi|432884647|ref|XP_004074522.1| PREDICTED: polyubiquitin-B-like isoform 3 [Oryzias latipes]
gi|432884649|ref|XP_004074523.1| PREDICTED: polyubiquitin-B-like isoform 4 [Oryzias latipes]
gi|449476588|ref|XP_004176460.1| PREDICTED: polyubiquitin-B [Taeniopygia guttata]
gi|104829|pir||S13928 ubiquitin precursor - chicken
gi|533889|gb|AAA29362.1| polyubiquitin [Anopheles gambiae]
gi|197129058|gb|ACH45556.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
gi|197632335|gb|ACH70891.1| polyubiquitin [Salmo salar]
gi|223647274|gb|ACN10395.1| Ubiquitin [Salmo salar]
gi|223673153|gb|ACN12758.1| Ubiquitin [Salmo salar]
gi|449279318|gb|EMC86953.1| Ubiquitin [Columba livia]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|110671522|gb|ABG82012.1| putative ubiquitin B [Diaphorina citri]
gi|387019647|gb|AFJ51941.1| putative ubiquitin B [Crotalus adamanteus]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|323457057|gb|EGB12923.1| ubiquitin [Aureococcus anophagefferens]
Length = 250
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KIE +GIP +Q L+F G+ L+D +
Sbjct: 1 MQIFIKTLTGKIITLDVDPPDTIANVKQKIEDKEGIPPDRQRLIFCGRQLEDGPTLIDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ PQ+ + + + LD++ +DT+
Sbjct: 61 IQKQSTLHLVLRLGGPPQIFVKTLT--------------------GKTITLDVEPSDTIG 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + G + +D R+L DC +++ + + + +R
Sbjct: 101 NVKQKIQDKEGIPSDQQRLIFKGKQFEDGRTLSDCSILNYSTLHLVLR 148
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K+KI+ +GIP +Q L+F G+ +D R + C IL S + L
Sbjct: 86 GKTITLDVEPSDTIGNVKQKIQDKEGIPSDQQRLIFKGKQFEDGRTLSDCSILNYSTLHL 145
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ +P+ + E + +I + + + + L ++ +DT+ +K+KI +
Sbjct: 146 VLRLLKEPEREPESEPEPESELEQIVVKTLT-----GKTITLVVEPSDTIGNVKQKIQDK 200
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR---PSPTA 173
E IP ++ + G + +D +L DC + + + + +R P P A
Sbjct: 201 EGIPPDQQRLIFKGKQFEDGLTLSDCNIPNKSTFHLVLRRRPPPPLA 247
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 3 VIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEIL 62
++ + GK T+ V DT+ +K+KI+ +GIP +Q L+F G+ +D + C I
Sbjct: 170 IVVKTLTGKTITLVVEPSDTIGNVKQKIQDKEGIPPDQQRLIFKGKQFEDGLTLSDCNIP 229
Query: 63 QNSRIQLLVASDNKP 77
S L++ P
Sbjct: 230 NKSTFHLVLRRRPPP 244
>gi|197129053|gb|ACH45551.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
Length = 305
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLSDYNIQKESTL 295
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRRRADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|27734383|gb|AAM51220.1| polyubiquitin [Euglypha rotunda]
gi|27734385|gb|AAM51221.1| polyubiquitin [Euglypha rotunda]
Length = 177
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 30/205 (14%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R + + + + + L
Sbjct: 3 GKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD++ +DT+ +K+KI +
Sbjct: 63 VLRL---------RGGSGMQIFVK---TLTGKT------ITLDVEASDTIENVKQKIQDK 104
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + A + + +R SGM ++
Sbjct: 105 EGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHLVLRLRG------GSGM-----QIF 153
Query: 190 VLTQCGNKRIPVEVNASDNVSELRK 214
V T G K I ++V ASD + +++
Sbjct: 154 VKTLTG-KTITLDVEASDTIENVKQ 177
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 72 MQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 131
Query: 61 ILQNSRIQLLV 71
+ + + + L++
Sbjct: 132 VTKEATLHLVL 142
>gi|256072199|ref|XP_002572424.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
gi|164510084|emb|CAJ32646.1| ubiquitin [Xantho incisus]
gi|226473060|emb|CAX71216.1| polyubiquitin [Schistosoma japonicum]
Length = 228
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|158753|gb|AAA28997.1| ubiquitin [Drosophila melanogaster]
Length = 231
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|49586|emb|CAA30815.1| unnamed protein product [Cricetulus sp.]
Length = 223
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 213 IQKESTLHLVL 223
>gi|226477468|emb|CAX72428.1| ubiquitin C [Schistosoma japonicum]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLPLVLR 224
>gi|424513675|emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
Length = 359
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 128 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 187
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 188 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 227
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 228 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 279
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 280 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 328
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 329 LEDGRTLADYNIQKESTL 346
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 263
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 264 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 303
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 304 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 351
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 111/253 (43%), Gaps = 49/253 (19%)
Query: 25 EIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQS 84
E + + + +GIP +Q L+F G+ L+D R + I + S + L++ Q+ +
Sbjct: 76 EKESALSRARGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 135
Query: 85 SPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGA 144
+ + L+++ +DT+ +K KI + E IP ++ + +G
Sbjct: 136 T--------------------GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 175
Query: 145 ELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVN 204
+L+D R+L D + + + + +R GM ++ V T G K I +EV
Sbjct: 176 QLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVE 221
Query: 205 ASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI------ 258
+SD + ++ ++Q +P D I+ ++D R+ +++ + T+
Sbjct: 222 SSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 276
Query: 259 ----EIFNGSVTG 267
+IF ++TG
Sbjct: 277 RGGMQIFVKTLTG 289
>gi|375298520|dbj|BAL61087.1| polyubiquitin [Dianthus caryophyllus]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|42490818|gb|AAH66197.1| Ubiquitin B [Mus musculus]
Length = 305
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLPDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS T+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PSV------------------TIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|156087036|ref|XP_001610925.1| polyubiquitin [Babesia bovis T2Bo]
gi|154798178|gb|EDO07357.1| polyubiquitin, putative [Babesia bovis]
Length = 233
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|61369554|gb|AAX43350.1| ubiquitin B [synthetic construct]
Length = 230
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|5912028|emb|CAB55973.1| hypothetical protein [Homo sapiens]
Length = 239
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 11 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 70
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 71 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 110
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 111 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 162
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 163 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 211
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 212 LEDGRTLSDYNIQKESTL 229
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 146
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 147 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 186
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 187 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 234
>gi|395517134|ref|XP_003762737.1| PREDICTED: polyubiquitin-B-like [Sarcophilus harrisii]
Length = 305
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQXXXIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP + +F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQXXXIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|313215765|emb|CBY16339.1| unnamed protein product [Oikopleura dioica]
Length = 188
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV ASD + ++ ++Q
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQ 183
>gi|296478548|tpg|DAA20663.1| TPA: ubiquitin C [Bos taurus]
Length = 314
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLSDYNIQKESTL 295
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|73955934|ref|XP_536651.2| PREDICTED: polyubiquitin-B isoform 1 [Canis lupus familiaris]
gi|345800303|ref|XP_003434677.1| PREDICTED: polyubiquitin-B [Canis lupus familiaris]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MPIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|425780946|gb|EKV18932.1| hypothetical protein PDIP_25190 [Penicillium digitatum Pd1]
Length = 233
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 39/249 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 14 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 73
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 74 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKSKIQDK 113
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 114 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 160
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 161 VKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 214
Query: 250 HHVGQGDTI 258
+++ + T+
Sbjct: 215 YNIQKESTL 223
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 81 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 141 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 180
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 181 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 228
>gi|18044723|gb|AAH19850.1| Ubiquitin B [Mus musculus]
Length = 305
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQHRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|367029699|ref|XP_003664133.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
42464]
gi|347011403|gb|AEO58888.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
42464]
Length = 305
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESADTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 TVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ++D + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESADTIETVKNKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLSDYNIQKESTL 295
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESADSIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESADTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 TVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ++D + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESADTIETVKNKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESADTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 TVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|399217583|emb|CCF74470.1| unnamed protein product [Babesia microti strain RI]
Length = 282
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|349592832|gb|AEP96154.1| ubiquitin C-like protein [Euplectes orix]
Length = 224
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQXLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLSDYNI 213
>gi|28394784|gb|AAO42469.1| putative polyubiquitin [Arabidopsis lyrata]
Length = 289
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 1 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 60
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 61 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDK 100
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 101 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 147
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 148 VKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLAD 201
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 202 YNIQKESTLHLVLRLRGGMQIFVKTLTG 229
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 115/258 (44%), Gaps = 47/258 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 68 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 127
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 128 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 167
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 168 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 219
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +S E+Q +P D I+
Sbjct: 220 M-----QIFVKTLTG-KTITLEVESS--------EIQDKE-----GIPPDQQRLIFAGKQ 260
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 261 LEDGRTLADYNIQKESTL 278
>gi|195340400|ref|XP_002036801.1| GM12582 [Drosophila sechellia]
gi|194130917|gb|EDW52960.1| GM12582 [Drosophila sechellia]
Length = 321
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLLGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|164430972|gb|ABY55758.1| ubiquitin [Drosophila silvestris]
Length = 222
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 9 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 68
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 69 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 108
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 109 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 160
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 161 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 209
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 210 LEDGRTLSDYNI 221
>gi|226477452|emb|CAX72420.1| polyubiquitin [Schistosoma japonicum]
Length = 268
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 122/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+ D R+ +++ + T+ +IF ++TG
Sbjct: 202 LGDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLGDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV SD + ++ ++Q
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQ 259
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLGDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIP 133
+K KI + E IP
Sbjct: 253 NVKAKIQDKEGIP 265
>gi|145530714|ref|XP_001451129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418773|emb|CAK83732.1| unnamed protein product [Paramecium tetraurelia]
Length = 624
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 244 MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 303
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 304 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTID 343
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 344 AVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 395
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 396 M-----QIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKE-----GIPPDQQRLIFAGKQ 444
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF S+TG
Sbjct: 445 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKSLTG 481
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 396 MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 455
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ ++ + I S T + LD++ +DT+
Sbjct: 456 IQKESTLHLVL-----------------RLRGGMQIFVKSLT---GKTITLDVEPSDTID 495
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 496 AVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 547
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 548 M-----QIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKE-----GIPPDQQRLIFAGKQ 596
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 597 LEDGRTLSDYNIQKESTL 614
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 54/278 (19%)
Query: 5 FEPQR-----GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHC 59
FE +R GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 167 FEIERWNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 226
Query: 60 EILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTV 119
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 227 NIQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTI 266
Query: 120 LRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSS 179
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 267 DAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRG 318
Query: 180 GMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQN 239
GM ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 319 GM-----QIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKE-----GIPPDQQRLIFAGK 367
Query: 240 VMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 368 QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 405
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 133/323 (41%), Gaps = 75/323 (23%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 26 MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 85
Query: 61 ILQNSRIQLLV------------------ASDN----KPQVKTEQSSPS----------- 87
I + S + L++ SD K +++ ++ P
Sbjct: 86 IQKESTLHLVLRLKRWNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFCRKV 145
Query: 88 -------------KKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPV 134
K IH ++ + LD++ +DT+ +K KI + E IP
Sbjct: 146 IRRWKNTFRLQHLKGIHSPLSFEIERWNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPP 205
Query: 135 NRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQC 194
++ + +G +L+D R+L D + + + + +R GM ++ V T
Sbjct: 206 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKTLT 252
Query: 195 GNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQ 254
G K I ++V SD + ++ ++Q +P D I+ ++D R+ +++ +
Sbjct: 253 G-KTITLDVEPSDTIDAVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQK 306
Query: 255 GDTI----------EIFNGSVTG 267
T+ +IF ++TG
Sbjct: 307 ESTLHLVLRLRGGMQIFVKTLTG 329
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 472 MQIFVKSLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 531
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 532 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTID 571
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 572 AVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 619
>gi|402898876|ref|XP_003919464.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-B [Papio anubis]
Length = 305
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ ++ + I + T + L+++ +DT+
Sbjct: 61 IQKESTLHLVL-----------------RLRXCMQIFVKTLT---GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|12849189|dbj|BAB28242.1| unnamed protein product [Mus musculus]
Length = 305
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVFR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|66802284|ref|XP_629924.1| hypothetical protein DDB_G0291928 [Dictyostelium discoideum AX4]
gi|66825263|ref|XP_645986.1| hypothetical protein DDB_G0269458 [Dictyostelium discoideum AX4]
gi|302595963|sp|P0CG80.1|UBIQI_DICDI RecName: Full=Polyubiquitin-I; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595964|sp|P0CG88.1|UBIQJ_DICDI RecName: Full=Polyubiquitin-J; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|60463302|gb|EAL61494.1| hypothetical protein DDB_G0291928 [Dictyostelium discoideum AX4]
gi|60474142|gb|EAL72079.1| hypothetical protein DDB_G0269458 [Dictyostelium discoideum AX4]
Length = 305
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|27734387|gb|AAM51222.1| polyubiquitin [Euglypha rotunda]
Length = 177
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 30/205 (14%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R + + + + + L
Sbjct: 3 GKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD++ +DT+ +K+KI +
Sbjct: 63 VLRL---------RGGSGMQIFVK---TLTGKT------ITLDVEASDTIENVKQKIQDK 104
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + A + + +R SGM ++
Sbjct: 105 EGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEATLHLVLRLRG------GSGM-----QIF 153
Query: 190 VLTQCGNKRIPVEVNASDNVSELRK 214
V T G K I ++V ASD + +++
Sbjct: 154 VKTLTG-KTITLDVEASDTIENVKQ 177
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 72 MQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 131
Query: 61 ILQNSRIQLLV 71
+ + + + L++
Sbjct: 132 VTKEATLHLVL 142
>gi|111218908|gb|ABH08755.1| ubiquitin [Arabidopsis thaliana]
Length = 221
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 39/249 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 2 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 61
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 62 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDK 101
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 102 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 148
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 149 VKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLAD 202
Query: 250 HHVGQGDTI 258
+++ + T+
Sbjct: 203 YNIQKESTL 211
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 69 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 128
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 129 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 168
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 169 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 216
>gi|170583349|ref|XP_001896539.1| ubiquitin [Brugia malayi]
gi|158596243|gb|EDP34630.1| ubiquitin, putative [Brugia malayi]
Length = 307
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 47/277 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DTV
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVETSDTVE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP + + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPGQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG--------- 151
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
L++ V T + I +EV SD + ++ K+ + Q F K+
Sbjct: 152 ----GLQIFVKT-LTSMTITLEVETSDTIENVKA---KVQDKEGIPPDQQRLIFAGKRKQ 203
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+F +++ + T+ +IF ++TG
Sbjct: 204 LEDGRTFSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 240
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 22/159 (13%)
Query: 12 AFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQ--VLQDDRDVEHCEILQNSRIQL 69
T+EV DT+ +K K++ +GIP +Q L+F G+ L+D R I + S + L
Sbjct: 164 TITLEVETSDTIENVKAKVQDKEGIPPDQQRLIFAGKRKQLEDGRTFSDYNIQKESTLHL 223
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 224 VLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIENVKAKIQDK 263
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 264 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 302
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 231 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 290
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 291 IQKESTLHLVL 301
>gi|66814762|ref|XP_641560.1| hypothetical protein DDB_G0279721 [Dictyostelium discoideum AX4]
gi|302595962|sp|P0CG81.1|UBIQH_DICDI RecName: Full=Polyubiquitin-H; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-like
gi|60469646|gb|EAL67635.1| hypothetical protein DDB_G0279721 [Dictyostelium discoideum AX4]
Length = 381
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVECSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVECSDNIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|27806505|ref|NP_776558.1| polyubiquitin-B [Bos taurus]
gi|645|emb|CAA79146.1| polyubiquitin [Bos taurus]
Length = 305
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLFDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|350537541|ref|NP_001232763.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
gi|197129065|gb|ACH45563.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
Length = 229
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + I L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTII--------------------LEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTIILEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|66804955|ref|XP_636210.1| hypothetical protein DDB_G0289449 [Dictyostelium discoideum AX4]
gi|302595960|sp|P0CG78.1|UBIQF_DICDI RecName: Full=Polyubiquitin-F; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|167947|gb|AAA33267.1| ubiquitin [Dictyostelium discoideum]
gi|60464567|gb|EAL62704.1| hypothetical protein DDB_G0289449 [Dictyostelium discoideum AX4]
Length = 533
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 506 LEDGRTLSDYNI 517
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|66811838|ref|XP_640098.1| hypothetical protein DDB_G0282369 [Dictyostelium discoideum AX4]
gi|302595961|sp|P0CG79.1|UBIQG_DICDI RecName: Full=Polyubiquitin-G; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|167949|gb|AAA33268.1| ubiquitin [Dictyostelium discoideum]
gi|60468034|gb|EAL66044.1| hypothetical protein DDB_G0282369 [Dictyostelium discoideum AX4]
Length = 381
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 354 LEDGRTLSDYNI 365
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|403366242|gb|EJY82919.1| Ubiquitin [Oxytricha trifallax]
Length = 379
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 112/261 (42%), Gaps = 46/261 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + S
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-----------------TSRKIYSS 295
Query: 181 MGP---RKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYK 237
GP R + V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 296 FGPQTQRWYAIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFA 349
Query: 238 QNVMDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 350 GKQLEDGRTLSDYNIQKESTL 370
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 21/168 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY- 287
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
SR + S PQ + + K + K + LD++ +DT+
Sbjct: 288 ---TSR---KIYSSFGPQTQRWYAIFVKTLTGK--------------TITLDVEPSDTIE 327
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 328 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 375
>gi|226469788|emb|CAX76724.1| polyubiquitin [Schistosoma japonicum]
Length = 304
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ + Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKTQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K K + +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKTQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|66807485|ref|XP_637465.1| hypothetical protein DDB_G0286907 [Dictyostelium discoideum AX4]
gi|302595959|sp|P0CG77.1|UBIQD_DICDI RecName: Full=Polyubiquitin-D; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|167943|gb|AAA33265.1| ubiquitin [Dictyostelium discoideum]
gi|167953|gb|AAA33270.1| ubiquitin [Dictyostelium discoideum]
gi|60465881|gb|EAL63951.1| hypothetical protein DDB_G0286907 [Dictyostelium discoideum AX4]
Length = 229
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|193678764|ref|XP_001950434.1| PREDICTED: polyubiquitin-A-like [Acyrthosiphon pisum]
Length = 686
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD++ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD++ ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD++ ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVESSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 120/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD++ ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVESSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>gi|307006571|gb|ADN23570.1| ubiquitin [Hyalomma marginatum rufipes]
Length = 275
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 47 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 106
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 107 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 146
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 147 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 198
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 199 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 247
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 248 LEDGRTLPDYNIQKESTL 265
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 123 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 182
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 183 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 222
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 223 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLPDYNIQKESTLHLVLR 270
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 49/244 (20%)
Query: 34 QGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLK 93
+GIP +Q L+F G+ L+D R + I + S + L++ Q+ ++ K I L+
Sbjct: 4 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV-KTLTGKTITLE 62
Query: 94 INIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLR 153
+ PS DT+ +K KI + E IP ++ + +G +L+D R+L
Sbjct: 63 VE-PS------------------DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 103
Query: 154 DCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
D + + + + +R GM ++ V T G K I +EV SD + ++
Sbjct: 104 DYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVEPSDTIENVK 149
Query: 214 KELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNG 263
++Q +P D I+ ++D R+ +++ + T+ +IF
Sbjct: 150 AKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 204
Query: 264 SVTG 267
++TG
Sbjct: 205 TLTG 208
>gi|197129052|gb|ACH45550.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
Length = 245
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDDN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLSDYNI 213
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPT 172
+K KI + E IP ++ + +G +L+D R+L D N + V+ P P
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY----NIQKXVNSAPCPA 224
>gi|167935|gb|AAA33261.1| ubiquitin, partial [Dictyostelium discoideum]
Length = 381
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDNIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEGSDNIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 354 LEDGRTLFDYNI 365
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLFDYNIQKESTLHLVLR 376
>gi|327356699|gb|EGE85556.1| hypothetical protein BDDG_08501 [Ajellomyces dermatitidis ATCC
18188]
Length = 333
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 128/285 (44%), Gaps = 37/285 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHH--------HHLPLD 112
I + S + L++ Q+ I + + + T+ + L+
Sbjct: 61 IQKESTLHLVLRLRGGMQICMSFEQVLSYIDMFYVRENQALTYTLQTVVKTLTGKTITLE 120
Query: 113 MDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPT 172
++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 121 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR---- 176
Query: 173 ATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGY 232
GM ++ V T G K I +EV +SD + ++ ++Q +P D
Sbjct: 177 ----LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQ 221
Query: 233 FFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
I+ ++D R+ +++ + T+ +IF ++TG
Sbjct: 222 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 266
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 39/249 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 114 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 173
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 174 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKSKIQDK 213
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 214 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 260
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 261 VKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 314
Query: 250 HHVGQGDTI 258
+++ + T+
Sbjct: 315 YNIQKESTL 323
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 181 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 240
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 241 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 280
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 281 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 328
>gi|440791755|gb|ELR12993.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
gi|440792103|gb|ELR13331.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 115/258 (44%), Gaps = 48/258 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + +
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES------------------- 141
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
L L+ + K I +EV +SD + +++++Q +P D I+
Sbjct: 142 ----TLHLIFVKTLTGKTITLEVESSDTIENVKQKIQDKE-----GIPPDQQRLIFAGKQ 192
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 193 LEDGRTLADYNIQKESTL 210
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 29/168 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+ VKT KT + L+++ +DT+
Sbjct: 137 IQKESTLHLIF-------VKT----------------LTGKT------ITLEVESSDTIE 167
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 168 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 215
>gi|343485961|dbj|BAK61738.1| ubiquitin [Larcopyle butschlii]
Length = 188
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDVESSDTIS 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I ++V +SD +S ++ ++Q
Sbjct: 153 M-----QIFVKTLTG-KTITLDVESSDTISNVKAKIQ 183
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 20/132 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDVESSDTIS 176
Query: 121 RLKEKIHEMESI 132
+K KI + E I
Sbjct: 177 NVKAKIQDKEGI 188
>gi|193627304|ref|XP_001947010.1| PREDICTED: polyubiquitin-G-like [Acyrthosiphon pisum]
Length = 381
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD++ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 120/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD++ ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|405978203|gb|EKC42613.1| Ubiquitin [Crassostrea gigas]
Length = 222
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 39/249 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ ++ K I L++ PS DT+ +K KI +
Sbjct: 63 VLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIENVKAKIQDK 102
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 103 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 149
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV SD + ++ ++Q +P D I+ ++D R+
Sbjct: 150 VKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 203
Query: 250 HHVGQGDTI 258
+++ + T+
Sbjct: 204 YNIQKESTL 212
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 70 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 129
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 130 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 169
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 170 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 217
>gi|449662449|ref|XP_004205543.1| PREDICTED: polyubiquitin-B-like isoform 1 [Hydra magnipapillata]
gi|449665888|ref|XP_002158413.2| PREDICTED: polyubiquitin-like [Hydra magnipapillata]
Length = 380
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEAADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPADTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +D + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPADTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPADTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +D + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPADTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPADTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|444791|prf||1908225A ubiquitin
Length = 305
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKECIPPDQQRLIFAGKQLEDGRTLFDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|380446928|gb|AFD53810.1| ubiquitin, partial [Trichoderma harzianum]
Length = 264
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 122/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 6 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 65
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 66 IQKESTLHLVLRLRGGMQIFVKTLT--------------------WKTVTLEVESSDTID 105
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 106 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 157
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 158 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 206
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ + + T+ +IF ++TG
Sbjct: 207 LEDGRTLSDYXIQXESTLHLVLRLRGGMQIFVKTLTG 243
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + K T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 82 MQIFVKTLTWKTVTLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 141
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 142 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 181
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 182 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQXESTLHLVLR--------LRGG 233
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNV 209
M ++ V T G K I +EV +SD +
Sbjct: 234 M-----QIFVKTLTG-KTITLEVESSDTI 256
>gi|237842873|ref|XP_002370734.1| polyubiquitin, putative [Toxoplasma gondii ME49]
gi|211968398|gb|EEB03594.1| polyubiquitin, putative [Toxoplasma gondii ME49]
gi|221485709|gb|EEE23990.1| polyubiquitin, putative [Toxoplasma gondii GT1]
gi|221502923|gb|EEE28633.1| polyubiquitin, putative [Toxoplasma gondii VEG]
Length = 307
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|66812158|ref|XP_640258.1| hypothetical protein DDB_G0282295 [Dictyostelium discoideum AX4]
gi|302595958|sp|P0CG76.1|UBIQA_DICDI RecName: Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related 1; Flags:
Precursor
gi|167937|gb|AAA33262.1| ubiquitin [Dictyostelium discoideum]
gi|167951|gb|AAA33269.1| ubiquitin [Dictyostelium discoideum]
gi|60468260|gb|EAL66269.1| hypothetical protein DDB_G0282295 [Dictyostelium discoideum AX4]
Length = 381
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDNIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEGSDNIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 354 LEDGRTLSDYNI 365
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|403330856|gb|EJY64339.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
Length = 304
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|298710587|emb|CBJ32017.1| similar to ubiquitin [Ectocarpus siliculosus]
Length = 609
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + +++++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + +++++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTID 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>gi|226484047|emb|CAX79692.1| ubiquitin C [Schistosoma japonicum]
Length = 229
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
+ D R+ +++ + T+
Sbjct: 202 LKDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLKDGRTLSDYNIQKESTLHLVLR 224
>gi|324525461|gb|ADY48550.1| Polyubiquitin, partial [Ascaris suum]
Length = 263
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQLFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K + +EV SD V ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTLTLEVEPSDAVQHVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++DDR+ +++ + T+
Sbjct: 202 LEDDRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT L L+++ +D V
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------LTLEVEPSDAVQ 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 HVKAKIQDKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLHLVLR 224
>gi|402483942|gb|AFQ60003.1| polyubiquitin, partial [Solen grandis]
Length = 275
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 39/247 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 67 MQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 126
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 127 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDSIE 166
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G L+D R+L D + + + + +R G
Sbjct: 167 NVKAKIQDKEGIPPDQQRLIFAGKHLEDGRTLSDYNIQKESTLHLVLR--------LRGG 218
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD++ ++ ++Q +P D I+
Sbjct: 219 M-----QIFVKTLTG-KTITLEVEASDSIENVKAKIQDKE-----SIPPDQQRLIFAGKQ 267
Query: 241 MDDDRSF 247
++D R+
Sbjct: 268 LEDGRTL 274
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 49/267 (18%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L+
Sbjct: 1 KTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 60
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
+ Q+ + + KT + L+++ +D++ +K KI + E
Sbjct: 61 LRLRGGMQIFVKTLT--------------GKT------ITLEVEASDSIENVKAKIQDKE 100
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLV 190
IP ++ + +G +L+D R+L D + + + + +R GM ++ V
Sbjct: 101 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFV 147
Query: 191 LTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWH 250
T G K I +EV ASD++ ++ ++Q +P D I+ ++D R+ +
Sbjct: 148 KTLTG-KTITLEVEASDSIENVKAKIQDKE-----GIPPDQQRLIFAGKHLEDGRTLSDY 201
Query: 251 HVGQGDTI----------EIFNGSVTG 267
++ + T+ +IF ++TG
Sbjct: 202 NIQKESTLHLVLRLRGGMQIFVKTLTG 228
>gi|388510652|gb|AFK43392.1| unknown [Medicago truncatula]
Length = 233
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNAKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLADYNI 213
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|239788925|dbj|BAH71115.1| ACYPI006410 [Acyrthosiphon pisum]
Length = 230
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 117/252 (46%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD++ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLSDYNI 213
>gi|401412470|ref|XP_003885682.1| Ubiquitin, related [Neospora caninum Liverpool]
gi|325120102|emb|CBZ55656.1| Ubiquitin, related [Neospora caninum Liverpool]
Length = 535
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>gi|124805744|ref|XP_001350526.1| polyubiquitin [Plasmodium falciparum 3D7]
gi|6138833|emb|CAB59728.1| Polyubiquitin [Plasmodium falciparum 3D7]
gi|23496650|gb|AAN36206.1| polyubiquitin [Plasmodium falciparum 3D7]
Length = 381
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|224503947|gb|ACN53545.1| polyubiquitin-like protein [Piriformospora indica]
Length = 229
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 120/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ ++K I+ +GIP +Q L+F G+ L+D R + +
Sbjct: 1 MHIFVKTLTGKTITLEVESSDTIDDVKTNIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYD 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q I LK KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQ-----------IFLK---TLTGKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ +G +L+D R+L D + + + + +R + G
Sbjct: 101 DVKTKIQDKEGIPPDQQRWIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LTGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ ++K KI+ +GIP +Q +F G+ L+D R +
Sbjct: 77 MQIFLKTLTGKTITLEVESSDTIDDVKTKIQDKEGIPPDQQRWIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLTGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|324525469|gb|ADY48551.1| Polyubiquitin, partial [Ascaris suum]
Length = 263
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQLFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K + +EV SD V ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTLTLEVEPSDAVQHVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++DDR+ +++ + T+
Sbjct: 202 LEDDRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT L L+++ +D V
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------LTLEVEPSDAVQ 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 HVKAKIQDKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLHLVLR 224
>gi|3789940|gb|AAC67551.1| tetra-ubiquitin [Saccharum hybrid cultivar H32-8560]
Length = 305
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I S L++ Q+ + + KT + L+++ +DT
Sbjct: 137 IQXESXXHLVLRXRGGMQIFVKTXT--------------GKT------ITLEVESSDTXD 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKXKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------XRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLADYNIQKESTL 295
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 121/277 (43%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + + KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDXIDXVXAKIQDKEGIPPDQQRLIFAGKQLEDGRTLXDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTXHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQXESXXHLVLR--------XRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTXTG-KTITLEVESSDTXDNVKXKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRXRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTXTGKTITLEVESSDTXDNVKXKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRXRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>gi|118399883|ref|XP_001032265.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89286605|gb|EAR84602.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 1252
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 39/251 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 1033 GKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1092
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + LD++ +DT+ +K KI +
Sbjct: 1093 VLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIENVKAKIQDK 1132
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 1133 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 1179
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I ++V ASD + ++ ++Q +P D I+ ++D R+
Sbjct: 1180 VKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 1233
Query: 250 HHVGQGDTIEI 260
+++ + T+ +
Sbjct: 1234 YNIQKESTLHL 1244
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1100 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 1159
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 1160 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 1199
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 1200 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1247
>gi|413926506|gb|AFW66438.1| putative ubiquitin family protein, partial [Zea mays]
gi|413926515|gb|AFW66447.1| ubiquitin2, partial [Zea mays]
Length = 349
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 35/236 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIY 236
M ++ V T G K I +EV +SD + ++ ++QK H L G I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQK-ESTLHLVLRLRGGMQIF 201
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 198 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 257
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 258 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 297
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 298 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 345
>gi|110736490|dbj|BAF00213.1| polyubiquitin 4 UBQ4 [Arabidopsis thaliana]
Length = 351
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 35/236 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIY 236
M ++ V T G K I +EV +SD + ++ ++QK H L G I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQK-ESTLHLVLRLRGGMQIF 201
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 198 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 257
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 258 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 297
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 298 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 345
>gi|299470074|emb|CBN79251.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 380
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 116/252 (46%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 152 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 211
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +DT+
Sbjct: 212 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDVEPSDTID 251
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 252 GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 303
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + +++++Q +P D I+
Sbjct: 304 M-----QIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKE-----GIPPDQQRLIFAGKQ 352
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 353 LEDGRTLSDYNI 364
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 130/270 (48%), Gaps = 39/270 (14%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEI--LQNSRI 67
GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R + I L++ R
Sbjct: 71 GKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKLEDGR- 129
Query: 68 QLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIH 127
SD Q ++S+ + L+ + KT + LD++ +DT+ +K+KI
Sbjct: 130 ---TLSDYNIQ---KESTLHLVLRLRGGMQIFVKT-LTGKTITLDVEPSDTIDGVKQKIQ 182
Query: 128 EMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLK 187
+ E IP ++ + +G +L+D R+L D + + + + +R GM +
Sbjct: 183 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----Q 229
Query: 188 LLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSF 247
+ V T G K I ++V SD + +++++Q +P D I+ ++D R+
Sbjct: 230 IFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKE-----GIPPDQQRLIFAGKQLEDGRTL 283
Query: 248 RWHHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 284 SDYNIQKESTLHLVLRLRGGMQIFVKTLTG 313
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 228 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 287
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +DT+
Sbjct: 288 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDVEPSDTID 327
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 328 GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 375
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 58/281 (20%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I +KI +K KT + LD++ +DT+
Sbjct: 61 I--------------------------QKIFVKT---LTGKT------ITLDVEPSDTID 85
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDC---ELMDNAEI-DVHVRPSPTATST 176
+K+KI + E IP ++ + +G +L+D R+L D +L D + D +++ T
Sbjct: 86 GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKLEDGRTLSDYNIQKESTLHLV 145
Query: 177 TSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIY 236
G +++ V T G K I ++V SD + +++++Q +P D I+
Sbjct: 146 LRLRGG---MQIFVKTLTG-KTITLDVEPSDTIDGVKQKIQDKE-----GIPPDQQRLIF 196
Query: 237 KQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 197 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 237
>gi|428175943|gb|EKX44830.1| ubiquitin [Guillardia theta CCMP2712]
Length = 229
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 MVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDMVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 MVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|403338482|gb|EJY68482.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
Length = 228
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|16552475|dbj|BAB71316.1| unnamed protein product [Homo sapiens]
Length = 388
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 46/259 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 123 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 182
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 183 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 222
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 223 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 274
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 275 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 323
Query: 241 MDDDRSFRWHHVGQGDTIE 259
++D R+ DTIE
Sbjct: 324 LEDGRTL-------SDTIE 335
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 130/303 (42%), Gaps = 55/303 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDV---- 56
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 57 ---EHCEILQNSRIQLL----VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTH------ 103
E + ++N + ++ + D + + + + NI S H
Sbjct: 61 IQKEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 120
Query: 104 ---------HHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D
Sbjct: 121 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 180
Query: 155 CELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRK 214
+ + + + +R GM ++ V T G K I +EV SD + ++
Sbjct: 181 YNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVEPSDTIENVKA 226
Query: 215 ELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGS 264
++Q +P D I+ ++D R+ +++ + T+ +IF +
Sbjct: 227 KIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 281
Query: 265 VTG 267
+TG
Sbjct: 282 LTG 284
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 199 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 258
Query: 61 ILQNSRIQLLVASDNKPQV---------KTEQSSPSKKI-HLKINI-------PSNSKTH 103
I + S + L++ Q+ T + PS I ++K I P +
Sbjct: 259 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 318
Query: 104 HHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEI 163
L ++DT+ +K KI + E IP ++ + +G +L+D R+L D + + +
Sbjct: 319 FAGKQLEDGRTLSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 378
Query: 164 DVHVR 168
+ +R
Sbjct: 379 HLVLR 383
>gi|6007448|gb|AAF00920.1|AF188158_1 ubiquitin [Oxytricha trifallax]
gi|403333775|gb|EJY66009.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
Length = 229
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|156396888|ref|XP_001637624.1| predicted protein [Nematostella vectensis]
gi|156224738|gb|EDO45561.1| predicted protein [Nematostella vectensis]
Length = 147
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + H LD++ +DTV
Sbjct: 61 IQKESTLHLVLRLRGGMQISVK---------------------AHWKTFTLDVEASDTVE 99
Query: 121 RLKEKIHEMESIP--VNRLLVQSSGAELQDHRSLRD 154
+KEKI E IP V RLL + EL D+RSL D
Sbjct: 100 SVKEKIQNREGIPPKVQRLLYEEE--ELVDNRSLAD 133
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 73/153 (47%), Gaps = 20/153 (13%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
GM + + K ++V ASD V +++++Q +P
Sbjct: 73 --------LRGGMQ-------ISVKAHWKTFTLDVEASDTVESVKEKIQNRE-----GIP 112
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIF 261
+Y++ + D+RS +++ QG + +F
Sbjct: 113 PKVQRLLYEEEELVDNRSLADYNIKQGSILHLF 145
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K FT++V DTV +KEKI+ +GIP Q L++ + L D+R + I Q S + L
Sbjct: 86 KTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLF 145
Query: 71 V 71
+
Sbjct: 146 L 146
>gi|195587564|ref|XP_002083531.1| GD13314 [Drosophila simulans]
gi|194195540|gb|EDX09116.1| GD13314 [Drosophila simulans]
Length = 300
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV SD + ++ ++Q
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQ 259
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 20/138 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLL 138
+K KI + E IP ++ L
Sbjct: 253 NVKAKIQDKEGIPPDQQL 270
>gi|145524134|ref|XP_001447897.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415425|emb|CAK80500.1| unnamed protein product [Paramecium tetraurelia]
Length = 358
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 43/260 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 50 MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 109
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+ + L+ I K +H LD++ +DT+
Sbjct: 110 IQKESTLHLV-------------------LRLRGGILLTWK-----NHAALDVEPSDTID 145
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 146 AVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 197
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 198 M-----QIFVKTLTG-KTITLDVEPSDTIDAVKAKIQDKE-----GIPPDQQRLIFAGKQ 246
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
++D R+ +++ + T+ +
Sbjct: 247 LEDGRTLSDYNIQKESTLHL 266
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 20/148 (13%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVK 80
DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+
Sbjct: 142 DTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 201
Query: 81 TEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQ 140
+ + KT + LD++ +DT+ +K KI + E IP ++ +
Sbjct: 202 VKTLT--------------GKT------ITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLI 241
Query: 141 SSGAELQDHRSLRDCELMDNAEIDVHVR 168
+G +L+D R+L D + + + + +R
Sbjct: 242 FAGKQLEDGRTLSDYNIQKESTLHLVLR 269
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 29 KIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSK 88
KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 2 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT--- 58
Query: 89 KIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQD 148
KT + LD++ +DT+ +K KI + E IP ++ + +G +L+D
Sbjct: 59 -----------GKT------ITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLED 101
Query: 149 HRSLRDCELMDNAEIDVHVR 168
R+L D + + + + +R
Sbjct: 102 GRTLSDYNIQKESTLHLVLR 121
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 198 MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 257
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 258 IQKESTLHLVL 268
>gi|82539669|ref|XP_724205.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478774|gb|EAA15770.1| Unknown protein [Plasmodium yoelii yoelii]
Length = 329
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 102 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 161
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 162 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 201
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 202 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 253
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 254 M-----QIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 302
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 303 LEDGRTLSDYNIQKESTL 320
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 49/267 (18%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L+
Sbjct: 36 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 95
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
+ Q+ + + KT + LD++ +DT+ +K KI + E
Sbjct: 96 LRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIENVKAKIQDKE 135
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLV 190
IP ++ + +G +L+D R+L D + + + + +R GM ++ V
Sbjct: 136 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFV 182
Query: 191 LTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWH 250
T G K I ++V SD + ++ ++Q +P D I+ ++D R+ +
Sbjct: 183 KTLTG-KTITLDVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDY 236
Query: 251 HVGQGDTI----------EIFNGSVTG 267
++ + T+ +IF ++TG
Sbjct: 237 NIQKESTLHLVLRLRGGMQIFVKTLTG 263
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 178 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 237
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 238 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 277
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 278 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 325
>gi|297823007|ref|XP_002879386.1| hypothetical protein ARALYDRAFT_902287 [Arabidopsis lyrata subsp.
lyrata]
gi|297325225|gb|EFH55645.1| hypothetical protein ARALYDRAFT_902287 [Arabidopsis lyrata subsp.
lyrata]
Length = 196
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 33/195 (16%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQ-NSRIQLLVA------S 73
++VLE+K+++ ++ IP TL + L D D+E I+ +RI L V S
Sbjct: 7 ESVLEVKKRLGQFLQIPASSLTLFVSCWELIDGLDIEDYPIISHGTRIDLTVTPFFTAPS 66
Query: 74 DNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIP 133
P V+ KIH+ + PS T +++D +TV LK+KIH +E+ P
Sbjct: 67 FINPAVR--------KIHVTVKFPSKQFT--------VEVDRTETVSSLKDKIHIVENTP 110
Query: 134 VNRLLVQSSGAELQ-DHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGP-RKLKLLVL 191
+ R+ + SG EL D+R+L + + + +EI V ++ + + + P RKL LV
Sbjct: 111 IKRMQLYYSGIELADDYRNLNEYGISEFSEIVVFLK-----SINRAKDVAPVRKLCFLVQ 165
Query: 192 TQCG---NKRIPVEV 203
T RIPVE+
Sbjct: 166 TSSSLFNGARIPVEI 180
>gi|339233016|ref|XP_003381625.1| ubiquitin family protein [Trichinella spiralis]
gi|316979538|gb|EFV62321.1| ubiquitin family protein [Trichinella spiralis]
Length = 258
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 33 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 92
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 93 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 132
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R L D + + + + +R G
Sbjct: 133 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSDYNIQKESTLHLVLR--------LRGG 184
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 185 M-----QIFVKTLTG-KTITLEVEPSDTIENVKGKIQDKE-----GIPPDQQRLIFAGKQ 233
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 234 LEDGRTLSDYNIQKESTL 251
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 109 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSDYN 168
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 169 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 208
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPS 170
+K KI + E IP ++ + +G +L+D R+L D + + + + +R S
Sbjct: 209 NVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLS 258
>gi|140083661|gb|ABO84843.1| ubiquitin B [Sus scrofa]
Length = 209
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 39/247 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSF 247
++D R+
Sbjct: 202 LEDGRTL 208
>gi|154339611|ref|XP_001562497.1| polyubiquitin, putative [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063080|emb|CAM39530.1| polyubiquitin, putative [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 1068
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 153 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 354 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 457 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 658 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 202 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 685 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 744
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 745 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 784
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 836
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 837 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 885
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 886 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 922
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 305 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 506 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 533 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 684
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 685 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 733
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 734 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 770
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 837 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 896
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 897 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 936
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 937 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 988
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 989 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 1037
Query: 241 MDDDRSFRWHHVGQGDTI 258
+++ R+ +++ + T+
Sbjct: 1038 LEEGRTLSDYNIQKESTL 1055
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 913 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 972
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 973 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 1012
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L++ R+L D + + + + +R
Sbjct: 1013 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 1060
>gi|449662451|ref|XP_004205544.1| PREDICTED: polyubiquitin-B-like isoform 2 [Hydra magnipapillata]
Length = 304
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPADTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +D + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPADTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPADTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|226484025|emb|CAX79681.1| ubiquitin C [Schistosoma japonicum]
Length = 229
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E P ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGTPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +G P +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGTPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|219118861|ref|XP_002180197.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|219118863|ref|XP_002180198.1| ubiquitin extension protein 4 [Phaeodactylum tricornutum CCAP
1055/1]
gi|217408454|gb|EEC48388.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408455|gb|EEC48389.1| ubiquitin extension protein 4 [Phaeodactylum tricornutum CCAP
1055/1]
Length = 381
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDVEPSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDVEPSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVEPSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDVEPSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>gi|308809920|ref|XP_003082269.1| polyubiquitin (ISS) [Ostreococcus tauri]
gi|116060737|emb|CAL57215.1| polyubiquitin (ISS) [Ostreococcus tauri]
Length = 288
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 53 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 112
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 113 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 152
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 153 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 204
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 205 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 235
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 20/148 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 129 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 188
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 189 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 228
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQD 148
+K KI + E IP ++ + +G +L+D
Sbjct: 229 NVKAKIQDKEGIPPDQQRLIFAGKQLED 256
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 108/243 (44%), Gaps = 49/243 (20%)
Query: 35 GIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKI 94
GIP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 11 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT--------- 61
Query: 95 NIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D
Sbjct: 62 -----GKT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 110
Query: 155 CELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRK 214
+ + + + +R GM ++ V T G K I +EV +SD + ++
Sbjct: 111 YNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKA 156
Query: 215 ELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGS 264
++Q +P D I+ ++D R+ +++ + T+ +IF +
Sbjct: 157 KIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT 211
Query: 265 VTG 267
+TG
Sbjct: 212 LTG 214
>gi|242556156|pdb|2KK8|A Chain A, Nmr Solution Structure Of A Putative Uncharacterized
Protein Obtained From Arabidopsis Thaliana: Northeast
Structural Genomics Consortium Target Ar3449a
Length = 84
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQV-LQDDRDVEHC 59
M + E G +F +EV + DT+L +K+KIE+ Q IPV KQTL+ +G V L++D VE C
Sbjct: 11 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDGIVILREDLTVEQC 70
Query: 60 EILQNSRIQLLVAS 73
+I+ S IQL V+S
Sbjct: 71 QIVPTSDIQLEVSS 84
>gi|380016682|ref|XP_003692305.1| PREDICTED: uncharacterized protein LOC100871808 [Apis florea]
Length = 377
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 20/158 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELM 158
+K KI + E IP ++ + +G +L+D R L DC L+
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRVLGDCPLV 138
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + C
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRVLGDCP 136
Query: 61 ILQ 63
++Q
Sbjct: 137 LVQ 139
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 19/137 (13%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
GM ++ V T G K I +EV ASD + ++ ++Q +P
Sbjct: 73 --------LRGGM-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIP 113
Query: 229 QDGYFFIYKQNVMDDDR 245
D I+ ++D R
Sbjct: 114 PDQQRLIFAGKQLEDGR 130
>gi|74024980|ref|XP_829056.1| polyubiquitin [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834442|gb|EAN79944.1| polyubiquitin, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 685
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 202 LEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 153 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 354 LEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 305 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 506 LEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 457 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
+++ R+ +++ + T+
Sbjct: 658 LEEGRTLADYNIQKESTL 675
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 533 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L++ R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 680
>gi|12851404|dbj|BAB29028.1| unnamed protein product [Mus musculus]
Length = 305
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+ V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLGVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 278 LEDGRTLSDYNIQKESTL 295
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI +GIP +Q L+F G+ L+D +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIRDKEGIPPDQQRLIFAGKQLEDGSTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
+ S + L++ Q+ ++ K I L + PS DT+
Sbjct: 61 NQKESTLHLVLRLRGGMQIFV-KTLTGKTITLGVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|340059193|emb|CCC53576.1| putative polyubiquitin [Trypanosoma vivax Y486]
Length = 282
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M ++ + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 38 MLILVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 97
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 98 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 137
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 138 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR--------LRGG 189
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 190 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 238
Query: 241 MDDDRSFRWHHVGQGDTI 258
+++ R+ +++ + T+
Sbjct: 239 LEEGRTLADYNIQKESTL 256
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 114 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 173
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 174 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 213
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L++ R+L D + + + + +R
Sbjct: 214 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 261
>gi|302847323|ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis]
gi|300259488|gb|EFJ43715.1| polyubiquitin [Volvox carteri f. nagariensis]
Length = 229
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR---------- 150
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
G +K+ LT K I +++ SD + ++ +++ ++ Q F KQ
Sbjct: 151 -GGMMIKVKTLT---GKEIEIDIEPSDTIERIK---ERVEEKEGIPPVQQRLIFAGKQ-- 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
M+DD+ + +++ G +
Sbjct: 202 MNDDKQAKDYNIEGGSVL 219
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L+F G+ + DD+ + I S + L
Sbjct: 162 GKEIEIDIEPSDTIERIKERVEEKEGIPPVQQRLIFAGKQMNDDKQAKDYNIEGGSVLHL 221
Query: 70 LVA 72
++A
Sbjct: 222 VLA 224
>gi|301096555|ref|XP_002897374.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
gi|262107065|gb|EEY65117.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
gi|348684366|gb|EGZ24181.1| hypothetical protein PHYSODRAFT_353926 [Phytophthora sojae]
Length = 305
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 129/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D++ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDSID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD++ +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDSIDNVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D++ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +D++
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDSID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|27734361|gb|AAM51209.1| polyubiquitin [Cercomonas edax]
Length = 177
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 30/205 (14%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD++ +DT+ +K+KI +
Sbjct: 63 VLRL---------RGGSGMQIFVK---TLTGKT------ITLDVESSDTIENVKQKIQDK 104
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R G +++
Sbjct: 105 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR-----------GGSGMQIF 153
Query: 190 VLTQCGNKRIPVEVNASDNVSELRK 214
V T G K I ++V +SD + +++
Sbjct: 154 VKTLTG-KTITLDVESSDTIGNVKQ 177
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 72 MQIFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 131
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 132 IQKESTLHLVL 142
>gi|307110244|gb|EFN58480.1| hypothetical protein CHLNCDRAFT_48528 [Chlorella variabilis]
Length = 229
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLVFAGKQLEDGRTLADYNIQKESTLHLVLRLR---------- 150
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
G +K+ LT K I +++ +D V +++ +++ +P I+
Sbjct: 151 -GGMMIKVKTLT---GKEIEIDIEPTDTVQRIKERVEEKE-----GIPPVQQRLIFAGKA 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
M+DD+ + +++ G +
Sbjct: 202 MNDDKMAKDYNIEGGSVL 219
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DTV IKE++E+ +GIP +Q L+F G+ + DD+ + I S + L
Sbjct: 162 GKEIEIDIEPTDTVQRIKERVEEKEGIPPVQQRLIFAGKAMNDDKMAKDYNIEGGSVLHL 221
Query: 70 LVA 72
++A
Sbjct: 222 VLA 224
>gi|226469792|emb|CAX76726.1| polyubiquitin [Schistosoma japonicum]
Length = 228
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++ +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTISLEVEPSDTIENVKAKIPDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTISLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIPDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|18421671|ref|NP_568552.1| polyubiquitin 9 [Arabidopsis thaliana]
gi|75170661|sp|Q9FHQ6.1|UBQ9_ARATH RecName: Full=Polyubiquitin 9; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Contains: RecName:
Full=Ubiquitin-related 4; Flags: Precursor
gi|9757974|dbj|BAB08310.1| polyubiquitin [Arabidopsis thaliana]
gi|332006830|gb|AED94213.1| polyubiquitin 9 [Arabidopsis thaliana]
Length = 322
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +G+P +Q L+F G+ L D R +
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + L+++ +DT
Sbjct: 139 IQKESTLHLVLRLRGGMQIFVRTLT--------------------RKTIALEVESSDTTD 178
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 179 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LCGG 230
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKL------HQRYHFHLPQ--DGY 232
M ++ V T G K I +EV +SD + ++ ++Q QR F Q DGY
Sbjct: 231 M-----QIFVNTLTG-KTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGY 284
Query: 233 FFIYKQNV 240
+ + N+
Sbjct: 285 YTLADYNI 292
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 122/267 (45%), Gaps = 49/267 (18%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K TI+V DT+ +K KI+ +GIP+ +Q L+F+G++L D R + I ++S + L
Sbjct: 13 KTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLA 72
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
+ Q+ + + KT + L+++ +DT+ +K KI + E
Sbjct: 73 LRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDKE 112
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLV 190
+P ++ + +G +L D R+L D + + + + +R G ++ +
Sbjct: 113 GVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLR-----------GGMQIFVRT 161
Query: 191 LTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWH 250
LT+ K I +EV +SD ++ ++Q +P D I+ ++D R+ +
Sbjct: 162 LTR---KTIALEVESSDTTDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADY 213
Query: 251 HVGQGDTI----------EIFNGSVTG 267
++ + T+ +IF ++TG
Sbjct: 214 NIQKESTLHLVLRLCGGMQIFVNTLTG 240
>gi|390334818|ref|XP_003724023.1| PREDICTED: uncharacterized protein LOC754856 [Strongylocentrotus
purpuratus]
Length = 1673
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS D++
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DSIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS D++
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DSIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 430 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 466
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS D++
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DSIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 532
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++Q +P D I+
Sbjct: 533 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 581
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 582 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 618
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS D++
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DSIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 684
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++Q +P D I+
Sbjct: 685 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 733
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 734 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 770
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 685 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS D++
Sbjct: 745 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DSIE 784
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 836
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++Q +P D I+
Sbjct: 837 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 885
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 886 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 922
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 837 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 896
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS D++
Sbjct: 897 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DSIE 936
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 937 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 988
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++Q +P D I+
Sbjct: 989 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 1037
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 1038 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 1074
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 989 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 1048
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS D++
Sbjct: 1049 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DSIE 1088
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 1089 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 1140
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++Q +P D I+
Sbjct: 1141 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 1189
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 1190 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 1226
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1141 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 1200
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS D++
Sbjct: 1201 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DSIE 1240
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 1241 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 1292
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++Q +P D I+
Sbjct: 1293 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 1341
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 1342 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 1378
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1293 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 1352
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS D++
Sbjct: 1353 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DSIE 1392
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 1393 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 1444
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++Q +P D I+
Sbjct: 1445 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 1493
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 1494 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 1530
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1445 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 1504
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS D++
Sbjct: 1505 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DSIE 1544
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 1545 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 1596
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++Q +P D I+
Sbjct: 1597 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 1645
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 1646 LEDGRTLSDYNIQKESTL 1663
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I Q + L S L++N+ KT + L+++ +D++
Sbjct: 61 I-QKXQTFLFFYS------------------LQVNMQIFVKT-LTGKTITLEVEPSDSIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1521 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 1580
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS D++
Sbjct: 1581 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DSIE 1620
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 1621 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 1668
>gi|226473056|emb|CAX71214.1| polyubiquitin [Schistosoma japonicum]
Length = 304
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++ +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIPDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRFRGGMQIFVKTLTG 238
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIPDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRFRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|57282601|emb|CAD27944.1| polyubiquitin-like [Oryza sativa]
Length = 219
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 115/249 (46%), Gaps = 39/249 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 10 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 69
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 70 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDK 109
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 110 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 156
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ K+ + H F KQ ++D R+
Sbjct: 157 VKTLTG-KTITLEVESSDTIDNVKA---KIQDKEGIHQTSKRLIFAGKQ--LEDGRTLAD 210
Query: 250 HHVGQGDTI 258
+++ + T+
Sbjct: 211 YNIQKESTL 219
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESI--PVNRLLVQSSGAELQDHRSLRD 154
+K KI + E I RL+ +G +L+D R+L D
Sbjct: 177 NVKAKIQDKEGIHQTSKRLIF--AGKQLEDGRTLAD 210
>gi|167945|gb|AAA33266.1| ubiquitin [Dictyostelium discoideum]
Length = 229
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + G T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGNTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|225711930|gb|ACO11811.1| Ubiquitin [Lepeophtheirus salmonis]
Length = 229
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKEPTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+ R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEGGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+ R +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEGGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|37595366|gb|AAQ94569.1| ubiquitin C [Danio rerio]
Length = 235
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKPLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + P KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVK--------------PLTGKT------ITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|342186084|emb|CCC95569.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 961
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEG-----IPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
+++ R+ +++ + T+ +
Sbjct: 202 LEEGRTLADYNIQKESTLHL 221
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 153 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEG-----IPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
+++ R+ +++ + T+ +
Sbjct: 354 LEEGRTLADYNIQKESTLHL 373
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 305 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEG-----IPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
+++ R+ +++ + T+ +
Sbjct: 506 LEEGRTLADYNIQKESTLHL 525
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 457 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEG-----IPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
+++ R+ +++ + T+ +
Sbjct: 658 LEEGRTLADYNIQKESTLHL 677
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 39/260 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 609 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKEG-----IPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
+++ R+ +++ + T+ +
Sbjct: 810 LEEGRTLADYNIQKESTLHL 829
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 761 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 820
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 821 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 860
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L++ R+L D + + + + +R
Sbjct: 861 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR 908
Score = 43.5 bits (101), Expect = 0.088, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 25/135 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 837 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 896
Query: 61 ILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDT 118
I + S + L++ Q VKT P + + +DT
Sbjct: 897 IQKESTLHLVLRLRGGMQIFVKTLPGRPC-----------------------FEGEASDT 933
Query: 119 VLRLKEKIHEMESIP 133
+ +K KI + E IP
Sbjct: 934 MRNVKAKIQDKEGIP 948
>gi|14596193|gb|AAK68824.1| Unknown protein [Arabidopsis thaliana]
Length = 229
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M + + K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 MQ------IFVKPLPGKTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + P KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVK--------------PLPGKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|302393786|sp|P22589.2|UBIQP_PHYIN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|3176|emb|CAA39250.1| ubiquitin [Phytophthora infestans]
gi|348684114|gb|EGZ23929.1| hypothetical protein PHYSODRAFT_284823 [Phytophthora sojae]
Length = 229
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 122/258 (47%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D++ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDSID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD++ +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEPSDSIDNVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D++ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +D++
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDSID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|27734341|gb|AAM51199.1| polyubiquitin [Lotharella amoeboformis]
Length = 175
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 32/205 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD+D +DT+ +K+KI +
Sbjct: 63 VL----------RLRGGAMQIFVK---TLTGKT------ITLDVDSSDTINTVKQKIQDK 103
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R + +++
Sbjct: 104 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR------------LRGGSMQIF 151
Query: 190 VLTQCGNKRIPVEVNASDNVSELRK 214
V T G K I ++V++SD ++ +++
Sbjct: 152 VKTLTG-KTITLDVDSSDTINTVKQ 175
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 71 MQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 130
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 131 IQKESTLHLVL 141
>gi|60417384|emb|CAI59819.1| ubiquitin [Nyctotherus ovalis]
Length = 208
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 114/242 (47%), Gaps = 39/242 (16%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K T++V DT+ ++K KI+ +GIP +Q L+F G+ L+D R + I + S + L+
Sbjct: 1 KTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 60
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
+ Q+ + + KT + LD++ NDT+ ++K KI + E
Sbjct: 61 LRLRGGMQIFVKTLT--------------GKT------ITLDVEPNDTIEQVKAKIQDKE 100
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLV 190
IP ++ + +G +L+D R+L D + + + + +R GM ++ V
Sbjct: 101 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIFV 147
Query: 191 LTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWH 250
T G K I ++V +D + +++ ++Q +P D I+ ++D R+ +
Sbjct: 148 KTLTG-KTITLDVEPNDTIEQVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADY 201
Query: 251 HV 252
++
Sbjct: 202 NI 203
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ ++K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 67 MQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 126
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ NDT+
Sbjct: 127 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPNDTIE 166
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCEL 157
++K KI + E IP ++ + +G +L+D R+L D +
Sbjct: 167 QVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 203
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ ++K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 143 MQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 202
Query: 61 ILQNS 65
I + S
Sbjct: 203 IQKES 207
>gi|154346116|ref|XP_001568995.1| putative polyubiquitin [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066337|emb|CAM44128.1| putative polyubiquitin [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 992
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 381 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 532
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 533 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 581
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 582 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 618
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 685 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 744
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 745 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 784
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 836
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 837 M-----QIFVKTLTG-KTIALEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 885
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 886 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 922
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 457 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 658 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 153 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 354 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 609 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 810 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 846
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 202 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 229 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 430 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 466
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 837 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 896
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 897 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEASDTIE 936
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L++ R+L D + + + + +R
Sbjct: 937 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 984
>gi|27734357|gb|AAM51207.1| polyubiquitin [Cercomonas edax]
gi|27734367|gb|AAM51212.1| polyubiquitin [Cercomonas edax]
Length = 177
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 30/205 (14%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD++ +DT+ +K+KI +
Sbjct: 63 VLRL---------RGGSGMQIFVK---TLTGKT------ITLDVESSDTIENVKQKIQDK 104
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R G +++
Sbjct: 105 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR-----------GGSGMQIF 153
Query: 190 VLTQCGNKRIPVEVNASDNVSELRK 214
V T G K I ++V +SD + +++
Sbjct: 154 VKTLTG-KTITLDVESSDTIENVKQ 177
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 72 MQIFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 131
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 132 IQKESTLHLVL 142
>gi|145498417|ref|XP_001435196.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402326|emb|CAK67799.1| unnamed protein product [Paramecium tetraurelia]
Length = 369
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 113/249 (45%), Gaps = 39/249 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 150 GKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 209
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + + LD++ +DT+ +K KI +
Sbjct: 210 VLRLRGGMQIFVKTLT--------------------GKTITLDVEPSDTIDAVKAKIQDK 249
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 250 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 296
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I ++V SD + ++ ++Q +P D I+ ++D R+
Sbjct: 297 VKTLTG-KTITLDVEPSDTIDAVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSD 350
Query: 250 HHVGQGDTI 258
+++ + T+
Sbjct: 351 YNIQKESTL 359
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 132/321 (41%), Gaps = 73/321 (22%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQV---------KTEQSSPS-------KKIHLKINIPSNSKTHH 104
I + S + L++ Q+ T PS KI K IP + +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLI 120
Query: 105 HHHH----------------------------LPLDMDVNDTVLRLKEKIHEMESIPVNR 136
H + LD++ +DT+ +K KI + E IP ++
Sbjct: 121 FAEHSQIITIQRGINPSLGFKIKRRNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQ 180
Query: 137 LLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGN 196
+ +G +L+D R+L D + + + + +R GM ++ V T G
Sbjct: 181 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG- 226
Query: 197 KRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGD 256
K I ++V SD + ++ ++Q +P D I+ ++D R+ +++ +
Sbjct: 227 KTITLDVEPSDTIDAVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 281
Query: 257 TI----------EIFNGSVTG 267
T+ +IF ++TG
Sbjct: 282 TLHLVLRLRGGMQIFVKTLTG 302
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 217 MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 276
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +DT+
Sbjct: 277 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDVEPSDTID 316
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 317 AVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 364
>gi|339233010|ref|XP_003381622.1| ubiquitin family protein [Trichinella spiralis]
gi|316979542|gb|EFV62324.1| ubiquitin family protein [Trichinella spiralis]
Length = 277
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKGKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>gi|111218906|gb|ABH08754.1| ubiquitin [Arabidopsis thaliana]
Length = 220
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 39/248 (15%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L+
Sbjct: 1 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 60
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
+ Q+ + + KT + L+++ +DT+ +K KI + E
Sbjct: 61 LRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDKE 100
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLV 190
IP ++ + +G +L+D R+L D + + + + +R GM ++ V
Sbjct: 101 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIFV 147
Query: 191 LTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWH 250
T G K I +EV +SD + ++ ++Q +P D I+ ++D R+ +
Sbjct: 148 KTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADY 201
Query: 251 HVGQGDTI 258
++ + T+
Sbjct: 202 NIQKESTL 209
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 67 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 126
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 127 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 166
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 167 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 214
>gi|399525602|gb|AFP44113.1| ubiquitin, partial [Lycoris longituba]
Length = 187
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 4 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 63
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 64 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 103
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 104 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 155
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV SD + ++ ++Q
Sbjct: 156 M-----QIFVKTLTG-KTITLEVEGSDTIDNVKAKIQ 186
>gi|169635149|gb|ACA58351.1| ubiquitin-like protein [Sandersonia aurantiaca]
Length = 189
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 183
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 176
Query: 121 RLKEKIHEMESIP 133
+K KI + E IP
Sbjct: 177 NVKAKIQDKEGIP 189
>gi|111218904|gb|ABH08753.1| ubiquitin [Arabidopsis thaliana]
Length = 219
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 39/248 (15%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L+
Sbjct: 1 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 60
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
+ Q+ + + KT + L+++ +DT+ +K KI + E
Sbjct: 61 LRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDKE 100
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLV 190
IP ++ + +G +L+D R+L D + + + + +R GM ++ V
Sbjct: 101 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIFV 147
Query: 191 LTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWH 250
T G K I +EV +SD + ++ ++Q +P D I+ ++D R+ +
Sbjct: 148 KTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADY 201
Query: 251 HVGQGDTI 258
++ + T+
Sbjct: 202 NIQKESTL 209
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 67 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 126
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 127 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 166
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 167 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 214
>gi|302393782|sp|P23324.2|UBIQP_EUPEU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|159038|gb|AAA62225.1| ubiquitin [Euplotes eurystomus]
Length = 229
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEQSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEQSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEQSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>gi|27734371|gb|AAM51214.1| polyubiquitin [Cercomonas sp. ATCC 50316]
gi|27734373|gb|AAM51215.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 177
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 30/205 (14%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD++ +DT+ +K+KI +
Sbjct: 63 VLRL---------RGGSGMQIFVK---TLTGKT------ITLDVESSDTIETVKQKIQDK 104
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R G +++
Sbjct: 105 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR-----------GGSGMQIF 153
Query: 190 VLTQCGNKRIPVEVNASDNVSELRK 214
V T G K I ++V +SD + +++
Sbjct: 154 VKTLTG-KTITLDVESSDTIETVKQ 177
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 72 MQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 131
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 132 IQKESTLHLVL 142
>gi|115187323|gb|ABI84246.1| polyubiquitin 10 [Arachis hypogaea]
Length = 192
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 183
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 176
Query: 121 RLKEKIHEMESIP 133
+K KI + E IP
Sbjct: 177 NVKAKIQDKEGIP 189
>gi|326427340|gb|EGD72910.1| ubiquitin [Salpingoeca sp. ATCC 50818]
Length = 220
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 48/258 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+ VKT KT + L+++ +D++
Sbjct: 61 IQKESTLHLIF-------VKT----------------LTGKT------ITLEVEPSDSIE 91
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 92 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 143
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++Q +P D I+
Sbjct: 144 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 192
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 193 LEDGRTLSDYNIQKESTL 210
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 77 GKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 136
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +D++ +K KI +
Sbjct: 137 VLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDSIENVKAKIQDK 176
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 215
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 144 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 203
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 204 IQKESTLHLVL 214
>gi|195164961|ref|XP_002023314.1| GL20619 [Drosophila persimilis]
gi|194105419|gb|EDW27462.1| GL20619 [Drosophila persimilis]
Length = 231
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 38/260 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ K + + + P HH
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV------KTLDWQDHHPRGRALGHHRES------------ 102
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 103 -FKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 153
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 154 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 202
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
++D R+ +++ + T+ +
Sbjct: 203 LEDGRTLSDYNIQKESTLHL 222
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 26 IKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSS 85
K KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 103 FKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 162
Query: 86 PSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAE 145
KT + L+++ +DT+ +K KI + E IP ++ + +G +
Sbjct: 163 --------------GKT------ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 202
Query: 146 LQDHRSLRDCELMDNAEIDVHVR 168
L+D R+L D + + + + +R
Sbjct: 203 LEDGRTLSDYNIQKESTLHLVLR 225
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 154 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 213
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 214 IQKESTLHLVL 224
>gi|224066593|ref|XP_002302153.1| predicted protein [Populus trichocarpa]
gi|224082516|ref|XP_002306725.1| predicted protein [Populus trichocarpa]
gi|118485172|gb|ABK94447.1| unknown [Populus trichocarpa]
gi|222843879|gb|EEE81426.1| predicted protein [Populus trichocarpa]
gi|222856174|gb|EEE93721.1| predicted protein [Populus trichocarpa]
Length = 154
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ NDT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPNDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ RD
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARD 134
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ I S + L
Sbjct: 86 GKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
G +K+ LT K I +++ +D + +++ +++ +P
Sbjct: 73 LR-----------GGTMIKVKTLT---GKEIEIDIEPNDTIDRIKERVEEKE-----GIP 113
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
IY + DD++ R +++ G +
Sbjct: 114 PVQQRLIYAGKQLGDDKTARDYNIEGGSVL 143
>gi|7439572|pir||T02358 ubiquitin homolog T8F5.13 - Arabidopsis thaliana
gi|3335355|gb|AAC27157.1| Match to polyubiquitin DNA gb|L05401 from A. thaliana. Contains
insertion of mitochondrial NADH dehydrogenase gb|X82618
and gb|X98301. May be a pseudogene with an expressed
insert. EST gb|AA586248 comes from this region
[Arabidopsis thaliana]
Length = 324
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLR--------LRGG 151
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 152 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----WIPPDQQRLIFAGKQ 200
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 201 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 237
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL---- 132
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHH---HHHLPLDMDVND 117
+DN + T +HL + + + + L+++ +D
Sbjct: 133 ------------ADNIQKEST--------LHLVLRLRGGMQIFVKTLTGKTITLEVESSD 172
Query: 118 TVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTT 177
T+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 173 TIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------L 224
Query: 178 SSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
GM ++ V T G K I +EV +S + ++ ++Q
Sbjct: 225 RGGM-----QIFVKTLTG-KTITLEVESSGTIDNVKAKIQ 258
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ + IP +Q L+F G+ L+D R +
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ + T+
Sbjct: 212 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSGTID 251
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQ 147
+K KI + E IP ++ + +G +L+
Sbjct: 252 NVKAKIQDKEGIPPDQQRLIFAGKQLE 278
>gi|357498827|ref|XP_003619702.1| Ubiquitin-like protein [Medicago truncatula]
gi|355494717|gb|AES75920.1| Ubiquitin-like protein [Medicago truncatula]
Length = 245
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 52 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 111
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 112 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 151
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 152 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 203
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 204 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 234
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 128 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 187
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 188 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 227
Query: 121 RLKEKIHEMESIP 133
+K KI + E IP
Sbjct: 228 NVKAKIQDKEGIP 240
>gi|304281944|gb|ADM21182.1| ubiquitin family protein [Arabidopsis thaliana]
Length = 257
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
+ + E Q G +F IEV DTVLE+K+KIEK Q IPV TL+F+G V +
Sbjct: 108 VKLFVENQSGSSFEIEVDHKDTVLELKQKIEKSQCIPVFNHTLIFHGTVFKT------IL 161
Query: 61 ILQNSRIQLLVASDNKPQ-VKTEQSSP 86
I+ SR+QL+V+ D P +TEQS P
Sbjct: 162 IVHESRLQLVVSPDQNPNHNQTEQSPP 188
>gi|290997001|ref|XP_002681070.1| polyubiquitin [Naegleria gruberi]
gi|284094693|gb|EFC48326.1| polyubiquitin [Naegleria gruberi]
Length = 153
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 24/170 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K K++ +GIP +Q L++ G+ L+D R +
Sbjct: 1 MQLFVKTLTGKTITLEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRTINDYN 60
Query: 61 ILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDT 118
I ++S + L++ Q VKT + N+ + ++M+ NDT
Sbjct: 61 IQKDSTLHLVLRLRGGMQLFVKT--------------LTGNT--------ITIEMESNDT 98
Query: 119 VLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
V +K+KI + E IP ++ + +G +L+D R++ D L ++ + + +R
Sbjct: 99 VENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRTISDYNLQKDSTVHLVLR 148
>gi|28436476|gb|AAO43305.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 21 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 80
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 81 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 120
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 121 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLR--------LRGG 171
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 172 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 220
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 221 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 257
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 172 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 231
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ + T+
Sbjct: 232 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSGTID 271
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 272 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 319
>gi|28436474|gb|AAO43304.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 21 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 80
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 81 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 120
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 121 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLR--------LRGG 171
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 172 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----WIPPDQQRLIFAGKQ 220
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 221 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 257
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ + IP +Q L+F G+ L+D R +
Sbjct: 172 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 231
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ + T+
Sbjct: 232 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSGTID 271
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 272 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 319
>gi|197129049|gb|ACH45547.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
Length = 209
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV SD + ++ ++Q
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQ 183
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 20/146 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAEL 146
+K KI + E IP ++ + +G +L
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQL 202
>gi|240254322|ref|NP_176714.4| ubiquitin 13 [Arabidopsis thaliana]
gi|332196241|gb|AEE34362.1| ubiquitin 13 [Arabidopsis thaliana]
Length = 319
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLR--------LRGG 151
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 152 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----WIPPDQQRLIFAGKQ 200
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 201 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 237
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 35/217 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 136 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 175
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 176 NVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 227
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +S + ++ ++Q
Sbjct: 228 M-----QIFVKTLTG-KTITLEVESSGTIDNVKAKIQ 258
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ + IP +Q L+F G+ L+D R +
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ + T+
Sbjct: 212 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSGTID 251
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQ 147
+K KI + E IP ++ + +G +L+
Sbjct: 252 NVKAKIQDKEGIPPDQQRLIFAGKQLE 278
>gi|357146617|ref|XP_003574055.1| PREDICTED: polyubiquitin-like [Brachypodium distachyon]
Length = 340
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K T++V DTV +IK K +GI Q L F G L++ V I+ NS ++L
Sbjct: 26 KTVTLDVNCTDTVDQIKSKFSTIEGIDKSMQELFFAGIHLKNHGKVADYNIMPNSSVELY 85
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
V ++ Q+ + S ++PS+ KT + L+M ++ V+ +K +I + E
Sbjct: 86 VT--DRMQISVDIPS---------DVPSDGKT------IRLNMKKSNKVVDVKAEIEQKE 128
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPS 170
IP+NR ++ G L+++ L C L ++ + + VRP+
Sbjct: 129 GIPINRQMLIYEGRHLENNHMLSQCGLTNDPALLLLVRPT 168
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 118/264 (44%), Gaps = 50/264 (18%)
Query: 7 PQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSR 66
P GK + + + V+++K +IE+ +GIP+ +Q L++ G+ L+++ + C + +
Sbjct: 101 PSDGKTIRLNMKKSNKVVDVKAEIEQKEGIPINRQMLIYEGRHLENNHMLSQCGLTNDPA 160
Query: 67 IQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKI 126
+ LLV P+ +H+ +N+ + L + TV +K I
Sbjct: 161 LLLLV-------------RPTDNLHVFVNVGDK-------RFVSLTVKCWHTVAIVKSMI 200
Query: 127 HEMESIPV-NRLLVQ-SSGAE--LQDHRSLRDCELMDNAEIDV------HVRPSPTATST 176
+E +P N++L+Q SG + L+D ++L+ + + N +I + H+R + T
Sbjct: 201 DSLEGLPAWNQILMQPRSGVDVVLKDSKTLQ-AQGVKNNDILILQQKVQHMRNNQTVQVF 259
Query: 177 TSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIY 236
G K + + +N SD V E+ K++++ + + Y+ Y
Sbjct: 260 IRLWEG--------------KTVTMFLNLSDRVEEVMKKIEE-----KLLIKEGIYYLCY 300
Query: 237 KQNVMDDDRSFRWHHVGQGDTIEI 260
+ + + + + H V + TI I
Sbjct: 301 QGHHLSSFDTLQKHGVKRHSTITI 324
>gi|27734369|gb|AAM51213.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 177
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 30/205 (14%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD++ +DT+ +K+KI +
Sbjct: 63 VLRL---------RGGSGMQIFVK---TLTGKT------ITLDVESSDTIETVKQKIQDK 104
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R SGM ++
Sbjct: 105 EGIPPDQQRLIFAGRQLEDGRTLADYNIQKESTLHLVLRLRG------GSGM-----QIF 153
Query: 190 VLTQCGNKRIPVEVNASDNVSELRK 214
V T G K I ++V +SD + +++
Sbjct: 154 VKTLTG-KTITLDVESSDTIETVKQ 177
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 72 MQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGRQLEDGRTLADYN 131
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 132 IQKESTLHLVL 142
>gi|281212331|gb|EFA86491.1| hypothetical protein PPL_00285 [Polysphondylium pallidum PN500]
Length = 1074
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 43/260 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDT 118
I + S + L++ Q VKT KT + L+++ +DT
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKT----------------LTGKT------ITLEVEGSDT 98
Query: 119 VLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTS 178
+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 99 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LR 150
Query: 179 SGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQ 238
GM ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 151 GGM-----QIFVKTLTG-KTITLEVEGSDTIENVKTKIQDKE-----GIPPDQQRLIFAG 199
Query: 239 NVMDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 200 KQLEDGRTLSDYNIQKESTL 219
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 60/239 (25%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S +HL + + ++ +DT+
Sbjct: 213 IQKES-----------------------TLHLVLRLRG--------------VEGSDTIE 235
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 236 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 287
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQN 239
M ++ V T G K I +EV SD + ++ ++Q ++G FF K N
Sbjct: 288 M-----QIFVKTLTG-KTITLEVEGSDTIENVKTKIQD---------KEEGLFFKKKPN 331
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDT 118
I + S + L++ Q VKT KT + L+++ +DT
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKT----------------LTGKT------ITLEVEGSDT 174
Query: 119 VLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTT 177
+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R S T
Sbjct: 175 IENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGVEGSDT 233
>gi|27734306|gb|AAM50044.1| polyubiquitin 7 [Cercomonas sp. ATCC 50316]
Length = 177
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 30/205 (14%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K+KI +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDVESSDTIETVKQKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + + +I +K KT + LD++ +DT+ +K+KI +
Sbjct: 63 VLRL---------RGGSAMQIFVK---TLTGKT------ITLDVESSDTIETVKQKIQDK 104
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R SGM ++
Sbjct: 105 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG------GSGM-----QIF 153
Query: 190 VLTQCGNKRIPVEVNASDNVSELRK 214
V T G K I ++V +SD + +++
Sbjct: 154 VKTLTG-KTITLDVESSDTIETVKQ 177
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 72 MQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 131
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 132 IQKESTLHLVL 142
>gi|395536358|ref|XP_003770187.1| PREDICTED: polyubiquitin-B [Sarcophilus harrisii]
Length = 305
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 122/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D +++ + T+ +IF ++TG
Sbjct: 202 LEDXXXLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDXXXLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>gi|102655942|gb|AAY33920.2| polyubiquitin [Euphorbia characias]
Length = 381
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKHLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L R+L D + + + + +R G
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLDHGRTLADYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K K + +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKFQDKEGIPPDQQRLIFAGKHLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKHLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+D R+ +++ + T+ +IF ++TG
Sbjct: 202 LDHGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPSQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|348537407|ref|XP_003456186.1| PREDICTED: polyubiquitin-C-like [Oreochromis niloticus]
Length = 237
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQS----SPSKKIHLKINIPSNSKTHHH---HHHLPLDM 113
I + S + L++ + + + S +HL + + N + + L++
Sbjct: 61 IQKESTLHLVLFAGKQLEDGRTLSDYNIQKESTLHLVLRLRENMQIFVKTLTGKTITLEV 120
Query: 114 DVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTA 173
+ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 121 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR----- 175
Query: 174 TSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNV 209
GM ++ V T G K I +EV SD +
Sbjct: 176 ---LRGGM-----QIFVKTLTG-KTITLEVEPSDTI 202
>gi|290997019|ref|XP_002681079.1| polyubiquitin [Naegleria gruberi]
gi|284094702|gb|EFC48335.1| polyubiquitin [Naegleria gruberi]
Length = 153
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L++ G+ L+D R +
Sbjct: 1 MQLFVKTLTGKTITLEVESNDSIENVKSKIQDKEGIPPEQQRLIYAGKQLEDGRTINDYN 60
Query: 61 ILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDT 118
I ++S + L++ Q VKT KT + ++M+ NDT
Sbjct: 61 IQKDSTLHLVLRLRGGMQLFVKT----------------LTGKT------ITIEMESNDT 98
Query: 119 VLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
V +K+KI + E IP ++ + +G +L+D R++ D L ++ + + +R
Sbjct: 99 VENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRTISDYNLQKDSTVHLVLR 148
>gi|115482500|ref|NP_001064843.1| Os10g0475900 [Oryza sativa Japonica Group]
gi|16905182|gb|AAL31052.1|AC078893_15 putative polyubiquitin [Oryza sativa Japonica Group]
gi|31432659|gb|AAP54264.1| Ubiquitin family protein, expressed [Oryza sativa Japonica Group]
gi|113639452|dbj|BAF26757.1| Os10g0475900 [Oryza sativa Japonica Group]
gi|215678821|dbj|BAG95258.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 328
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 21/160 (13%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K FT+ V DTV +IK K+ +GI KQ + F G L+++ + I+ NS + L
Sbjct: 28 KTFTLNVNSTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNEDKLADYNIMTNSSVDLY 87
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
V + I + + IPS KT L+M ++++ +K +I + E
Sbjct: 88 V---------------TDAIQISVRIPSVGKTTK------LNMRKSNSIADIKAEIEQEE 126
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPS 170
I +N ++ +G +L+D++ L C+L ++ V V P+
Sbjct: 127 GILMNEQILMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPN 166
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 24/158 (15%)
Query: 7 PQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSR 66
P GK + + +++ +IK +IE+ +GI + +Q L++ GQ L+D++ + C++ +
Sbjct: 99 PSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILMYAGQQLEDNQLLSQCDLRNDQT 158
Query: 67 IQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKI 126
+LV P+ K+H+ IN+ + L+ TV +K I
Sbjct: 159 FHVLVC-------------PNDKLHVFINV-------RGEKTIGLETKRWYTVADVKLMI 198
Query: 127 HEMESIPV-NRLL--VQSS-GAELQDHRSLRDCELMDN 160
+E +P +++L +QS G L D R L+D + +N
Sbjct: 199 ENLEGLPACSQILTRMQSGVGVALTDGRMLQDQHVKNN 236
>gi|28436472|gb|AAO43303.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 40/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 21 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 80
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 81 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 120
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 121 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLR--------LRGG 171
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 172 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----WIPPDQQRLIFAGKQ 220
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 221 LEDGRTLADYNIQKESTL 238
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ + IP +Q L+F G+ L+D R +
Sbjct: 172 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 231
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + N+ + T L+++ + T+
Sbjct: 232 IQKESTLHLVLRLRGGMQIFVK------------NLTGKTIT--------LEVESSGTID 271
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 272 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 319
>gi|125575126|gb|EAZ16410.1| hypothetical protein OsJ_31877 [Oryza sativa Japonica Group]
Length = 322
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 21/160 (13%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K FT+ V DTV +IK K+ +GI KQ + F G L+++ + I+ NS + L
Sbjct: 22 KTFTLNVNSTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNEDKLADYNIMTNSSVDLY 81
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
V + I + + IPS KT L+M ++++ +K +I + E
Sbjct: 82 V---------------TDAIQISVRIPSVGKTT------KLNMRKSNSIADIKAEIEQEE 120
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPS 170
I +N ++ +G +L+D++ L C+L ++ V V P+
Sbjct: 121 GILMNEQILMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPN 160
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 24/158 (15%)
Query: 7 PQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSR 66
P GK + + +++ +IK +IE+ +GI + +Q L++ GQ L+D++ + C++ +
Sbjct: 93 PSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILMYAGQQLEDNQLLSQCDLRNDQT 152
Query: 67 IQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKI 126
+LV P+ K+H+ IN+ + L+ TV +K I
Sbjct: 153 FHVLVC-------------PNDKLHVFINV-------RGEKTIGLETKRWYTVADVKLMI 192
Query: 127 HEMESIPV-NRLL--VQSS-GAELQDHRSLRDCELMDN 160
+E +P +++L +QS G L D R L+D + +N
Sbjct: 193 ENLEGLPACSQILTRMQSGVGVALTDGRMLQDQHVKNN 230
>gi|18405196|ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana]
gi|122213849|sp|Q3E7K8.1|UBQ12_ARATH RecName: Full=Polyubiquitin 12; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Flags: Precursor
gi|332195060|gb|AEE33181.1| polyubiquitin 12 [Arabidopsis thaliana]
Length = 230
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP + L+F G+ L+D R +
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
+ ++S + LL+ Q+ + + KT + L+++ +DT+
Sbjct: 61 VQEDSTLHLLLRFRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
LK KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 183
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E I ++ + +G + +D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVLR 224
>gi|195587566|ref|XP_002083532.1| GD13313 [Drosophila simulans]
gi|194195541|gb|EDX09117.1| GD13313 [Drosophila simulans]
Length = 195
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV SD + ++ ++Q
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQ 183
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIP 133
+K KI + E IP
Sbjct: 177 NVKAKIQDKEGIP 189
>gi|6118549|gb|AAF04147.1| ubiquitin precursor [Hevea brasiliensis]
Length = 381
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L ++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLGVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 183
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G L+ +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGSSLRMVAPLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>gi|388518367|gb|AFK47245.1| unknown [Medicago truncatula]
Length = 233
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLVFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKALTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHV 252
++D R+ +++
Sbjct: 202 LEDGRTLADNNI 213
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q LVF G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLVFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKALT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNNIQKESTLHLVLR 224
>gi|290971454|ref|XP_002668516.1| polyubiquitin [Naegleria gruberi]
gi|290992572|ref|XP_002678908.1| polyubiquitin [Naegleria gruberi]
gi|284081958|gb|EFC35772.1| polyubiquitin [Naegleria gruberi]
gi|284092522|gb|EFC46164.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 24/170 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K K++ +GIP +Q L++ G+ L+D R +
Sbjct: 1 MQLFVKTLTGKTITLEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRTINDYN 60
Query: 61 ILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDT 118
I ++S + L++ Q VKT KT + ++M+ NDT
Sbjct: 61 IQKDSTLHLVLRLRGGMQLFVKT----------------LTGKT------ITIEMESNDT 98
Query: 119 VLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ +K+KI + E IP ++ + +G +L+D R L D L ++ + + +R
Sbjct: 99 IQNMKQKIFDKEGIPSDQQRLIYAGKQLEDGRQLSDYNLQKDSTVHLVLR 148
>gi|357132045|ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
distachyon]
Length = 218
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESRDTIDSVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ ++ K+ I + T + L+++ +DT+
Sbjct: 61 IQKESTLHLVL-----------------RLRAKMQIFVKTLT---GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KIH+ E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|182407854|gb|ACB87918.1| polyubiquitin 3 [Malus x domestica]
Length = 188
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 34/208 (16%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 6 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 65
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + + L+++ +DT+ +K KI +
Sbjct: 66 VLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTIDNVKAKIQDK 105
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 106 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QMF 152
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQ 217
V T GN I +EV SD + ++ ++Q
Sbjct: 153 VKTLTGNT-ITLEVETSDTIDNVKDKIQ 179
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 73 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 132
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+ + L+ + KT + + L+++ +DT+
Sbjct: 133 IQKESTLHLV-------------------LRLRGGMQMFVKT-LTGNTITLEVETSDTID 172
Query: 121 RLKEKIHEMESIP 133
+K+KI + E IP
Sbjct: 173 NVKDKIQDKEGIP 185
>gi|71020945|ref|XP_760703.1| hypothetical protein UM04556.1 [Ustilago maydis 521]
gi|46100297|gb|EAK85530.1| hypothetical protein UM04556.1 [Ustilago maydis 521]
Length = 286
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 59 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 118
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 119 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 158
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R A +G
Sbjct: 159 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRCQNG 218
Query: 181 MG 182
G
Sbjct: 219 AG 220
>gi|164510092|emb|CAJ32650.1| ubiquitin [Mytilus edulis]
Length = 228
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q+L+F G+ L+D +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGSTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ + S +I +K KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVL-----------RLSGGMQIFVKT---LTGKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D +L D + + + + +R S G
Sbjct: 101 NVKAKIQDKEGIPPDQQSLIFAGKQLEDGSTLSDYNIQKESTLHLVLR--------LSGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D ++
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQSLMFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D + +++ + T+
Sbjct: 202 LEDGSTLSDYNIQKESTL 219
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q+L+F G+ L+D +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGSTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ + S +I +K KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVL-----------RLSGGMQIFVKT---LTGKT------ITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPS 170
+K KI + E IP ++ + +G +L+D +L D + + + + +R S
Sbjct: 177 NVKAKIQDKEGIPPDQQSLMFAGKQLEDGSTLSDYNIQKESTLHLVLRLS 226
>gi|344243115|gb|EGV99218.1| Ubiquitin [Cricetulus griseus]
Length = 430
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 119/277 (42%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV D + ++ +Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPRDTIENVKAWIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R +++ + T+ +IF ++TG
Sbjct: 202 LEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 116/277 (41%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K I+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPRDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K I + E IP ++ + +G +L+D R L D + + + + +R G
Sbjct: 253 NVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV D + ++ +Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPRDTIENVKAWIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R +++ + T+ +IF ++TG
Sbjct: 354 LEDGRPLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K I+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPRDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K I + E IP ++ + +G +L+D R L D + + + + +R G
Sbjct: 329 NVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
M ++ V T G K I +EV S+ + + ++E
Sbjct: 381 M-----QIFVKTLTG-KTITLEVEPSNTIKKSKQE 409
>gi|312380774|gb|EFR26677.1| hypothetical protein AND_07080 [Anopheles darlingi]
Length = 567
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 130/306 (42%), Gaps = 69/306 (22%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V +TVL+IK KIE+ +GI +Q ++F G+ L++ R +
Sbjct: 1 MQIFVKTLTGKTITLDVVPTETVLDIKSKIEEREGIDPDQQRIIFAGKQLENGRIISDYN 60
Query: 61 ILQNSRIQLL------------------VASDNKPQVKTEQSSPSKKIHLKINIPSN--- 99
I S + L+ +A D +P+ E S K+I + IP N
Sbjct: 61 IQHGSTMHLVLRLKGGMQIFVRMLTGKTIAIDTEPEATVE--SVKKQIDEREEIPPNQQR 118
Query: 100 ----------SKTHHHHH-----------------HLPLDMDVNDTVLRLKEKIHEMESI 132
+T + + L+++ +DT+ +K KI + E I
Sbjct: 119 MIFAGKQLEDGRTLEEYSIIKATNMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 178
Query: 133 PVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLT 192
P ++ + +G +L+D R+L D + + + + +R GM ++ V T
Sbjct: 179 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKT 225
Query: 193 QCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHV 252
G K I +EV SD + ++ ++Q +P D I+ ++D R+ +++
Sbjct: 226 LTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNI 279
Query: 253 GQGDTI 258
+ T+
Sbjct: 280 QKESTL 285
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 219 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 278
Query: 61 ILQNSRIQLLV--ASDNKPQVKTEQSSP 86
I + S + L++ A D P Q P
Sbjct: 279 IQKESTLHLVLPGAIDVPPCALCGQQRP 306
>gi|378747684|gb|AFC36452.1| ubiquitin, partial [Anoectochilus roxburghii]
Length = 214
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 32 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 91
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 92 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 131
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 132 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 183
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ +++
Sbjct: 184 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIR 214
>gi|27734379|gb|AAM51218.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 177
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 30/205 (14%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++ DT+ +K+KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDAESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD++ +DT+ +K+KI +
Sbjct: 63 VLRL---------RGGSGMQIFVK---TLTGKT------ITLDVESSDTIETVKQKIQDK 104
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R G +++
Sbjct: 105 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR-----------GGSGMQIF 153
Query: 190 VLTQCGNKRIPVEVNASDNVSELRK 214
V T G K I ++V +SD + +++
Sbjct: 154 VKTLTG-KTITLDVESSDTIETVKQ 177
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 72 MQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 131
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 132 IQKESTLHLVL 142
>gi|339232974|ref|XP_003381604.1| ubiquitin family protein [Trichinella spiralis]
gi|316979565|gb|EFV62342.1| ubiquitin family protein [Trichinella spiralis]
Length = 210
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV SD + ++ ++Q
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKGKIQ 183
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 20/146 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAEL 146
+K KI + E IP ++ + +G EL
Sbjct: 177 NVKGKIQDKEGIPPDQQRLIFAGIEL 202
>gi|125532351|gb|EAY78916.1| hypothetical protein OsI_34017 [Oryza sativa Indica Group]
Length = 322
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K FT+ V DTV +IK K+ +GI KQ + F G L++ + I+ NS + L
Sbjct: 22 KTFTLNVNGTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNKDKLADYNIMTNSSVDLY 81
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
V + I + + IPS KT L+M ++++ +K +I + E
Sbjct: 82 V---------------TDAIQISVRIPSVGKTTK------LNMRKSNSIADIKAEIEQEE 120
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPS 170
I +N ++ +G +L+D++ L C+L ++ V V P+
Sbjct: 121 GILMNEQILMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPN 160
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 24/158 (15%)
Query: 7 PQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSR 66
P GK + + +++ +IK +IE+ +GI + +Q L++ GQ L+D++ + C++ +
Sbjct: 93 PSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILMYAGQQLEDNQLLSQCDLRNDQT 152
Query: 67 IQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKI 126
+LV P+ K+H+ IN+ + L+ TV +K I
Sbjct: 153 FHVLVC-------------PNDKLHVFINV-------RGEKTIGLEAKRWYTVADVKLMI 192
Query: 127 HEMESIPV-NRLL--VQSS-GAELQDHRSLRDCELMDN 160
+E +P +++L +QS G L D R L+D + +N
Sbjct: 193 ENLEGLPACSQILTRMQSGVGVALTDGRMLQDQHVKNN 230
>gi|7862066|gb|AAF70460.1|AF240445_1 polyubiquitin [Populus tremula x Populus tremuloides]
Length = 154
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ NDT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPNDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ RD
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARD 134
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ I S + L
Sbjct: 86 GKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|440789929|gb|ELR11220.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 224
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R T
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGGKKTKCC- 159
Query: 181 MGPRKLKLLVLTQ---------CGNKRIP 200
G +++++T CG+ R+P
Sbjct: 160 FGECSKRVVLITGDCRFCQSQFCGSHRLP 188
>gi|16191634|emb|CAC94926.1| putative ubiquitin [Pleurotus sp. 'Florida']
Length = 243
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 34/213 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 58 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 117
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 118 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 157
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 158 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 209
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
M ++ V T G K I +EV +SD + ++
Sbjct: 210 M-----QIFVKTLTG-KTITLEVESSDTIDNVK 236
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 115/257 (44%), Gaps = 49/257 (19%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVK 80
DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+
Sbjct: 2 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 61
Query: 81 TEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQ 140
+ + + L+++ +DT+ +K KI + E IP ++ +
Sbjct: 62 VKTLT--------------------GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 101
Query: 141 SSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIP 200
+G +L+D R+L D + + + + +R GM ++ V T G K I
Sbjct: 102 FAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTIT 147
Query: 201 VEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI-- 258
+EV +SD + ++ ++Q +P D I+ ++D R+ +++ + T+
Sbjct: 148 LEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 202
Query: 259 --------EIFNGSVTG 267
+IF ++TG
Sbjct: 203 VLRLRGGMQIFVKTLTG 219
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 29/162 (17%)
Query: 116 NDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATS 175
+DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 1 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR------- 53
Query: 176 TTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFI 235
GM ++ V T G K I +EV +SD + ++ ++Q +P D I
Sbjct: 54 -LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLI 101
Query: 236 YKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+ ++D R+ +++ + T+ +IF ++TG
Sbjct: 102 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 143
>gi|443900281|dbj|GAC77607.1| ubiquitin and ubiquitin-like proteins [Pseudozyma antarctica T-34]
Length = 228
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R A +G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRCQNG 160
Query: 181 MG 182
G
Sbjct: 161 AG 162
>gi|118484809|gb|ABK94272.1| unknown [Populus trichocarpa]
Length = 154
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ NDT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPNDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ RD
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARD 134
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ I S + L
Sbjct: 86 GKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|310693627|gb|ADP05114.1| polyubiquitin 10 [Aponogeton madagascariensis]
Length = 221
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 39/249 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 4 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 63
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + ++ +DT+ +K KI +
Sbjct: 64 VLRLRGGMQIFVKTLTGETTTLE--------------------VESSDTIDNVKAKIQDK 103
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 104 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 150
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 151 VKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLAD 204
Query: 250 HHVGQGDTI 258
+++ + T+
Sbjct: 205 YNIQKESTL 213
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 20/148 (13%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVK 80
DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+
Sbjct: 91 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 150
Query: 81 TEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQ 140
+ + KT + L+++ +DT+ +K KI + E IP ++ +
Sbjct: 151 VKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 190
Query: 141 SSGAELQDHRSLRDCELMDNAEIDVHVR 168
+G +L+D R+L D + + + + +R
Sbjct: 191 FAGKQLEDGRTLADYNIQKESTLHLVLR 218
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 147 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 206
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 207 IQKESTLHLVL 217
>gi|225465030|ref|XP_002265864.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2 [Vitis vinifera]
gi|297736166|emb|CBI24204.3| unnamed protein product [Vitis vinifera]
Length = 155
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ RD
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARD 134
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
G +K+ LT K I +++ +D + +++ +++ +P
Sbjct: 73 LR-----------GGTMIKVKTLT---GKEIEIDIEPTDTIDRIKERVEEKE-----GIP 113
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269
IY + DD++ R +++ G + + GGS
Sbjct: 114 PVQQRLIYAGKQLGDDKTARDYNIEGGSVLHLVLALRGGGS 154
>gi|353238378|emb|CCA70326.1| related to UBI4-Ubiquitin [Piriformospora indica DSM 11827]
Length = 222
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 114/247 (46%), Gaps = 39/247 (15%)
Query: 12 AFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLV 71
T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++
Sbjct: 5 TITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 64
Query: 72 ASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMES 131
Q+ + + KT + L+++ +DT+ +K KI + E
Sbjct: 65 RLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKTKIQDKEG 104
Query: 132 IPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVL 191
IP ++ + +G +L+D R+L D + + + + +R GM ++ V
Sbjct: 105 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVK 151
Query: 192 TQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHH 251
T G K I +EV +SD + ++ ++Q +P D I+ ++D R+ ++
Sbjct: 152 TLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYN 205
Query: 252 VGQGDTI 258
+ + T+
Sbjct: 206 IQKESTL 212
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 70 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 129
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 130 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 169
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 170 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 217
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 29/169 (17%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 6 ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
GM ++ V T G K I +EV +SD + ++ ++Q +P
Sbjct: 66 --------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKE-----GIP 106
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
D I+ ++D R+ +++ + T+ +IF ++TG
Sbjct: 107 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 155
>gi|217074596|gb|ACJ85658.1| unknown [Medicago truncatula]
Length = 228
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 43/247 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLVFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKL------HQRYHF---HLPQDG 231
M ++ V G K I +EV +SD + ++ ++Q QR F +L G
Sbjct: 153 M-----QIFVKALTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNLRMGG 206
Query: 232 YFFIYKQ 238
IY Q
Sbjct: 207 LSLIYIQ 213
>gi|339233042|ref|XP_003381638.1| ubiquitin family protein [Trichinella spiralis]
gi|316979524|gb|EFV62308.1| ubiquitin family protein [Trichinella spiralis]
Length = 274
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 10 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 69
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 70 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 109
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R L D + + + + +R G
Sbjct: 110 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSDYNIQKESTLHLVLR--------LRGG 161
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV SD + ++ ++Q
Sbjct: 162 M-----QIFVKTLTG-KTITLEVEPSDTIENVKGKIQ 192
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 37/194 (19%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 86 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSDYN 145
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 146 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 185
Query: 121 RLKEKIHEMESIPVNR--------LLVQSSGAELQDHRSLRDCELMDNAEIDVHVR---- 168
+K KI + E IP ++ + + G +L+D R+L D + + + + +R
Sbjct: 186 NVKGKIQDKEGIPPDQQRLIFAEFMCMAFIGKQLEDGRTLADYNIQKESTLHLVLRLRGG 245
Query: 169 -----PSPTATSTT 177
+PT S T
Sbjct: 246 MQIFVKTPTGKSLT 259
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFN--------GQVLQD 52
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D
Sbjct: 162 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAEFMCMAFIGKQLED 221
Query: 53 DRDVEHCEILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHL 92
R + I + S + L++ Q VKT KIH+
Sbjct: 222 GRTLADYNIQKESTLHLVLRLRGGMQIFVKTPTGKSLTKIHV 263
>gi|255544634|ref|XP_002513378.1| ubiquitin, putative [Ricinus communis]
gi|223547286|gb|EEF48781.1| ubiquitin, putative [Ricinus communis]
Length = 154
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ RD
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARD 134
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
G +K+ LT K I +++ +D + +++ +++ +P
Sbjct: 73 LR-----------GGTMIKVKTLT---GKEIEIDIEPTDTIDRIKERVEEKE-----GIP 113
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
IY + DD++ R +++ G +
Sbjct: 114 PVQQRLIYAGKQLGDDKTARDYNIEGGSVL 143
>gi|27734377|gb|AAM51217.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 177
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 30/205 (14%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V D + +K+KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDVESSDMIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD++ +DT+ +K+KI +
Sbjct: 63 VLRL---------RGGSGMQIFVK---TLTGKT------ITLDVESSDTIETVKQKIQDK 104
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R G +++
Sbjct: 105 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR-----------GGSGMQIF 153
Query: 190 VLTQCGNKRIPVEVNASDNVSELRK 214
V T G K I ++V +SD + +++
Sbjct: 154 VKTLTG-KTITLDVESSDTIETVKQ 177
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 72 MQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 131
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 132 IQKESTLHLVL 142
>gi|168022983|ref|XP_001764018.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684757|gb|EDQ71157.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 334
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 34/248 (13%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQ-V 79
+TVL +K+ IE + I Q L + G++L+D+R +E +I S +Q+ + +
Sbjct: 11 NTVLAVKKAIEGSEIIGASLQRLSYGGRLLKDERALEDYQIDNTSTLQMWWCKCMACRAL 70
Query: 80 KTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLV 139
+Q+ + +I++ H +PL + N +V +K + E E P R +
Sbjct: 71 SADQTFHTMRIYV---------ATHRDQTIPLTVCRNGSVYSVKAMVREEEGTPAGRQRL 121
Query: 140 QSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRI 199
+ EL++ ++L +C N D +R +PT G+ P + + +L ++ I
Sbjct: 122 IFNDEELRNGKTLNEC----NVAKDCVLRMAPTE----PVGLMPVMVCIAIL----DRTI 169
Query: 200 PVEVNASDNVSELRKELQKL------HQRYHFHLPQDGY-FFIYKQNVMD--DDRSFRWH 250
+EV +D + +++ L ++ HQR GY FF N D DD +
Sbjct: 170 SLEVRKTDTIRDVKAVLHQVEGIPPYHQRLKLRY---GYGFFNRDMNNADLPDDITLGEL 226
Query: 251 HVGQGDTI 258
+V +GD+
Sbjct: 227 NVNRGDSF 234
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK+ I++ F TV +IK KI+ +GI KQ L+F LQDD+ + I +S ++L
Sbjct: 265 GKSLVIDLKSFHTVDDIKRKIQSKEGIAAHKQKLLFGDVELQDDKTLFEYGIEVDSILRL 324
Query: 70 LVASDNK 76
+V S K
Sbjct: 325 MVVSGGK 331
>gi|388857763|emb|CCF48657.1| probable polyubiquitin [Ustilago hordei]
Length = 228
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R A +G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRCQNG 160
Query: 181 MG 182
G
Sbjct: 161 AG 162
>gi|224083970|ref|XP_002307191.1| predicted protein [Populus trichocarpa]
gi|118481405|gb|ABK92645.1| unknown [Populus trichocarpa]
gi|118486039|gb|ABK94863.1| unknown [Populus trichocarpa]
gi|222856640|gb|EEE94187.1| predicted protein [Populus trichocarpa]
Length = 157
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ RD
Sbjct: 101 RVKERVEEKEGIPPVQQRLIYAGKQLGDDKTARD 134
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ +KE++E+ +GIP +Q L++ G+ L DD+ I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLGDDKTARDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
G +K+ LT K I +++ +D + +++ +++ +P
Sbjct: 73 LR-----------GGTMIKVKTLT---GKEIEIDIEPTDTIDRVKERVEEKE-----GIP 113
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
IY + DD++ R +++ G +
Sbjct: 114 PVQQRLIYAGKQLGDDKTARDYNIEGGSVL 143
>gi|145524136|ref|XP_001447898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415426|emb|CAK80501.1| unnamed protein product [Paramecium tetraurelia]
Length = 637
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 39/218 (17%)
Query: 5 FEPQR-----GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHC 59
FE +R GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 340 FEIERWNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 399
Query: 60 EILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTV 119
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 400 NIQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTI 439
Query: 120 LRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSS 179
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 440 DAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRG 491
Query: 180 GMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
GM ++ V T G K I ++V SD + ++ ++Q
Sbjct: 492 GM-----QIFVKTLTG-KTITLDVEPSDTIDAVKAKIQ 523
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 35/218 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 117 MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 176
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ + T+L
Sbjct: 177 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSSTLL 216
Query: 121 RLKE-KIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSS 179
L +I + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 217 TLSRLQIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRG 268
Query: 180 GMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
GM ++ V T G K I ++V SD + ++ ++Q
Sbjct: 269 GM-----QIFVKTLTG-KTITLDVEPSDTIDAVKAKIQ 300
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 48/216 (22%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 417 MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 476
Query: 61 ILQNSRIQLLVASDNKPQV---------KTEQSSPS-------KKIHLKINIPSNSK--- 101
I + S + L++ Q+ T PS KI K IP + +
Sbjct: 477 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLI 536
Query: 102 -----THHHHHHLP------------------------LDMDVNDTVLRLKEKIHEMESI 132
H H P LD++ +DT+ +K KI + E I
Sbjct: 537 FAGKLQHLKGIHSPLSFEIERWLRLQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGI 596
Query: 133 PVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
P ++ + +G +L+D R+L D + + + + +R
Sbjct: 597 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 632
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 57/277 (20%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q F LQ E+
Sbjct: 50 MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQKTHF----LQ-----ENYN 100
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 101 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTID 140
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 141 AVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 192
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V S + L +L + +P D I+
Sbjct: 193 M-----QIFVKTLTG-KTITLDVEPSSTLL----TLSRLQIQDKEGIPPDQQRLIFAGKQ 242
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 243 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 279
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 21/134 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKE-KIEKYQGIPVPKQTLVFNGQVLQDDRDVEHC 59
M + + GK T++V T+L + +I+ +GIP +Q L+F G+ L+D R +
Sbjct: 193 MQIFVKTLTGKTITLDVEPSSTLLTLSRLQIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 252
Query: 60 EILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTV 119
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 253 NIQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTI 292
Query: 120 LRLKEKIHEMESIP 133
+K KI + E IP
Sbjct: 293 DAVKAKIQDKEGIP 306
>gi|115438809|ref|NP_001043684.1| Os01g0641200 [Oryza sativa Japonica Group]
gi|302393767|sp|P0C032.2|RUB3_ORYSJ RecName: Full=Ubiquitin-like protein-NEDD8-like protein RUB3;
Contains: RecName: Full=Ubiquitin-like protein;
Contains: RecName: Full=NEDD8-like protein RUB3;
AltName: Full=OsRUB3; AltName: Full=Ubiquitin-related
protein 3; Flags: Precursor
gi|20161535|dbj|BAB90457.1| putative polyubiquitin 2 [Oryza sativa Japonica Group]
gi|20805124|dbj|BAB92795.1| putative polyubiquitin 2 [Oryza sativa Japonica Group]
gi|113533215|dbj|BAF05598.1| Os01g0641200 [Oryza sativa Japonica Group]
gi|125527016|gb|EAY75130.1| hypothetical protein OsI_03024 [Oryza sativa Indica Group]
gi|125571348|gb|EAZ12863.1| hypothetical protein OsJ_02783 [Oryza sativa Japonica Group]
Length = 154
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 20/157 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K K++ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ ++ +N+ + T + +D+++ DTV
Sbjct: 61 IQKESTLHLVL-----------------RLRGGLNVKVRTLT---GKEIDIDIEMTDTVD 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCEL 157
R+KE++ E E IP + + G +L D ++ D ++
Sbjct: 101 RIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKI 137
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DTV IKE++E+ +GIP +Q L++ G+ L DD+ +I S + L
Sbjct: 86 GKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|83305995|emb|CAE00783.1| polyubiquitin homolog [Sordaria macrospora]
Length = 208
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 116/246 (47%), Gaps = 39/246 (15%)
Query: 13 FTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVA 72
T+EV DT+ +K+KI+ + IP +Q L+F G+ L+D R + I + S + L++
Sbjct: 1 ITLEVESSDTIDNVKQKIQDKEDIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 60
Query: 73 SDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESI 132
Q+ + + KT + L+++ +DT+ +K+KI + E I
Sbjct: 61 LRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKQKIQDKEGI 100
Query: 133 PVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLT 192
P ++ + +G +L+D R+L D + + + + +R GM ++ V T
Sbjct: 101 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKT 147
Query: 193 QCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHV 252
G K I +EV +SD + +++++Q +P D I+ ++D R+ +++
Sbjct: 148 LTG-KTITLEVESSDTIDNVKQKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNI 201
Query: 253 GQGDTI 258
+ T+
Sbjct: 202 QKESTL 207
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 65 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 124
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 125 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 164
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCEL 157
+K+KI + E IP ++ + +G +L+D R+L D +
Sbjct: 165 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 201
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 82/169 (48%), Gaps = 29/169 (17%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 1 ITLEVESSDTIDNVKQKIQDKEDIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 60
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
GM ++ V T G K I +EV +SD + +++++Q +P
Sbjct: 61 --------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKQKIQDKE-----GIP 101
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
D I+ ++D R+ +++ + T+ +IF ++TG
Sbjct: 102 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 150
>gi|32400969|gb|AAP80690.1| polyubiquitin [Griffithsia japonica]
Length = 195
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 43 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 102
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 103 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 142
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 143 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 190
>gi|357474747|ref|XP_003607659.1| Ubiquitin [Medicago truncatula]
gi|355508714|gb|AES89856.1| Ubiquitin [Medicago truncatula]
Length = 259
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 29 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRILADYN 88
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 89 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 128
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 129 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYNIQKESTLHLVLR--------LRGG 180
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQK 218
M ++ V T G K I ++V +SD +++++ L++
Sbjct: 181 M-----QIFVNTLTG-KTITLDVESSDTIADVKLTLEE 212
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 105 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYN 164
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ ++ + I N+ T + LD++ +DT+
Sbjct: 165 IQKESTLHLVL-----------------RLRGGMQIFVNTLT---GKTITLDVESSDTIA 204
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSL 152
+K + E IP++++ V +G +L+D +L
Sbjct: 205 DVKLTLEEKVGIPLDQVRVVIAGKQLKDSYTL 236
>gi|327281434|ref|XP_003225453.1| PREDICTED: AN1-type zinc finger and ubiquitin domain-containing
protein 1-like [Anolis carolinensis]
Length = 711
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++I E G F + V F+TV+ +K KI++ +GIPV +Q L++N + L+DD + E
Sbjct: 28 MEIIIETLTGTCFELRVSPFETVISVKSKIQRLEGIPVSQQHLIWNDEELEDDYGLNDYE 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLILAMRGGP 104
>gi|339896986|ref|XP_001463552.2| polyubiquitin [Leishmania infantum JPCM5]
gi|321399001|emb|CAM65917.2| polyubiquitin [Leishmania infantum JPCM5]
Length = 866
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 55 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 114
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 115 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 154
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 155 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 206
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 207 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 255
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 256 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 292
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 207 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 266
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 267 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 306
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 307 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 358
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 359 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 407
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 408 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 444
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 359 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 418
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 419 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 458
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 459 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 510
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 511 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 559
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 560 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 596
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 511 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 570
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 571 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 610
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 611 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 662
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 663 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 711
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 712 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 748
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 663 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 722
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 723 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 762
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L++ R+L D + + + + +R
Sbjct: 763 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 810
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 108/244 (44%), Gaps = 49/244 (20%)
Query: 34 QGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLK 93
+GIP +Q L+F G+ L++ R + I + S + L++ Q+ + +
Sbjct: 12 EGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-------- 63
Query: 94 INIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLR 153
KT + L+++ +DT+ +K KI + E IP ++ + +G +L++ R+L
Sbjct: 64 ------GKT------IALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLS 111
Query: 154 DCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
D + + + + +R GM ++ V T G K I +EV SD + ++
Sbjct: 112 DYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTIALEVEPSDTIENVK 157
Query: 214 KELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNG 263
++Q +P D I+ +++ R+ +++ + T+ +IF
Sbjct: 158 AKIQDKE-----GIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 212
Query: 264 SVTG 267
++TG
Sbjct: 213 TLTG 216
>gi|346321308|gb|EGX90907.1| RING and UBP finger domain protein [Cordyceps militaris CM01]
Length = 776
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 21/180 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHV-RPSPTATSTTSS 179
+K KI + E IP ++ + +G +L+D R+L D + + + ++ +PS + S S
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLYTDQPSDSVYSALCS 160
>gi|392569336|gb|EIW62509.1| ubiquitin [Trametes versicolor FP-101664 SS1]
Length = 397
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ IK KI+ +G P +Q + F + L+DDR +
Sbjct: 78 MQIFVKTLSGKTITLEVKPLDTIRNIKAKIQAKEGNPPDQQRIKFAEEQLEDDRTLSDYN 137
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I NS +QL+ + + + + T PL++ +DT+
Sbjct: 138 IQWNSTLQLV-----------------GRFQIFVKTVAGETT-------PLEVVSSDTIK 173
Query: 121 RLKEKIHEME-SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSS 179
+KEK + E ++P + L+ +G EL+D L D + ++ + + +R
Sbjct: 174 DVKEKYRDKEGAVPAQQRLI-FAGKELEDDCILSDYGIQKDSTVHLVLR---------LP 223
Query: 180 GMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQN 239
GM ++ V + G K I +E +SD + +R+ ++ + +P D Y +
Sbjct: 224 GM-----QIFVKSYTG-KTITIEAKSSDTIGCVRERIRDTKE-----IPSD-YILKFADK 271
Query: 240 VMDDDRSFRWHHVGQGDTI 258
++DDR +++ DT+
Sbjct: 272 ELEDDRMLSDYNIQWDDTL 290
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 38/209 (18%)
Query: 7 PQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSR 66
P GK T+EV DT+ +K I +G+ +Q L+F G+ L R V + + S
Sbjct: 8 PTTGKTITLEVDSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSHRTVSDYNLRKGST 67
Query: 67 IQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKI 126
+ L+ + Q+ + S K I L++ PL DT+ +K KI
Sbjct: 68 VFLMFRVLDGMQIFVKTLS-GKTITLEVK--------------PL-----DTIRNIKAKI 107
Query: 127 HEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKL 186
E P ++ ++ + +L+D R+L D + N+ + + R
Sbjct: 108 QAKEGNPPDQQRIKFAEEQLEDDRTLSDYNIQWNSTLQLVGR-----------------F 150
Query: 187 KLLVLTQCGNKRIPVEVNASDNVSELRKE 215
++ V T G + P+EV +SD + +++++
Sbjct: 151 QIFVKTVAG-ETTPLEVVSSDTIKDVKEK 178
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+E FDTV +K KI+ G P KQ L+F G+ L D R + I + S + +
Sbjct: 305 GKTVTLEAESFDTVENVKAKIQDKDGNPPHKQCLIFAGKQLVDGRTLSDYNIQKESTLHV 364
Query: 70 LVA--SDNKPQVKTEQSSP 86
+ +P V T S P
Sbjct: 365 VWRQFGGMQPSVGTLPSEP 383
>gi|118370604|ref|XP_001018503.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300270|gb|EAR98258.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 384
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 121/277 (43%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+++ DT+ +K KI+ +GIP +Q L+F G+ L D + +
Sbjct: 77 MQIFVKTLTGKTVTLDLEPCDTIENVKAKIQDKEGIPPDQQRLIFAGKQLDDSKTISDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++V+DT+
Sbjct: 137 ISKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDLEVSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L D + L D + + + + +R G
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLDDGKILSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K + +++ + D + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTVTLDLESCDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+DD ++ +++ + T+ +IF ++TG
Sbjct: 278 LDDSKTISDYNISKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+++ DT+ +K KI+ +GIP +Q L+F G+ L D + +
Sbjct: 229 MQIFVKTLTGKTVTLDLESCDTIENVKAKIQDKEGIPPDQQRLIFAGKQLDDSKTISDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +DT+
Sbjct: 289 ISKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDLEASDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
+K KI + E IP ++ + SG L+D R+L D
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFSGKCLEDTRTLSD 362
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 117/277 (42%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + K T+ + DT+ IK KI+ +GIP +Q L+F G+ L D + +
Sbjct: 1 MQIFVKTLTRKTITLGLEVSDTIEGIKAKIQDKEGIPPDQQRLIFAGKQLDDGKTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTVTLDLEPCDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L D +++ D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLDDSKTISDYNISKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +++ SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDLEVSDTIENVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+DD + +++ + T+ +IF ++TG
Sbjct: 202 LDDGKILSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+++ DT+ +K KI+ +GIP +Q L+F+G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLDLEASDTIENVKSKIQDKEGIPPDQQRLIFSGKCLEDTRTLSDYN 364
Query: 61 ILQNSRIQLLV 71
I + + L++
Sbjct: 365 IQKEQTLHLVL 375
>gi|440792566|gb|ELR13775.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|40647160|gb|AAR88386.1| polyubiquitin 1, partial [Plasmodiophora brassicae]
gi|40647162|gb|AAR88387.1| polyubiquitin 2, partial [Plasmodiophora brassicae]
Length = 175
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 32/204 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD+D DT+ +K KI +
Sbjct: 63 VL----------RLRGGTMQIFVK---TLTGKT------ITLDVDSGDTIETVKAKIQDK 103
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R + +++
Sbjct: 104 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR------------LRGGTMQIF 151
Query: 190 VLTQCGNKRIPVEVNASDNVSELR 213
V T G K I ++V++ D + ++
Sbjct: 152 VKTLTG-KTITLDVDSGDTIETVK 174
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 71 MQIFVKTLTGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 130
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 131 IQKESTLHLVL 141
>gi|402586659|gb|EJW80596.1| polyubiquitin, partial [Wuchereria bancrofti]
Length = 198
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 105
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 106 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 145
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 146 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 193
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 39/225 (17%)
Query: 34 QGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLK 93
+GIP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 3 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-------- 54
Query: 94 INIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLR 153
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L
Sbjct: 55 ------GKT------ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 102
Query: 154 DCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
D + + + + +R GM ++ V T G K I +EV ASD + ++
Sbjct: 103 DYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVEASDTIENVK 148
Query: 214 KELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
++Q +P D I+ ++D R+ +++ + T+
Sbjct: 149 AKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 188
>gi|339899350|ref|XP_003392827.1| putative polyubiquitin [Leishmania infantum JPCM5]
gi|321398786|emb|CBZ09034.1| putative polyubiquitin [Leishmania infantum JPCM5]
Length = 684
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 153 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 354 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 305 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 506 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 457 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
+++ R+ +++ + T+
Sbjct: 658 LEEGRTLSDYNIQKESTL 675
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 123/278 (44%), Gaps = 51/278 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPS-NSKTHHHHHHLPLDMDVNDTV 119
I + S T + ++I + + KT + L+++ +DT+
Sbjct: 61 IQKES---------------TLHLLLRLRGGMQIFVKTLTGKT------IALEVEPSDTI 99
Query: 120 LRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSS 179
+K KI + E IP ++ + +G +L++ R+L D + + + + +R
Sbjct: 100 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRG 151
Query: 180 GMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQN 239
GM ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 152 GM-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGK 200
Query: 240 VMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 201 QLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 533 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L++ R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 680
>gi|157877206|ref|XP_001686933.1| putative polyubiquitin [Leishmania major strain Friedlin]
gi|68130008|emb|CAJ09316.1| putative polyubiquitin [Leishmania major strain Friedlin]
Length = 837
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 202 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 153 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 354 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 457 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 658 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 609 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI 258
+++ R+ +++ + T+
Sbjct: 810 LEEGRTLSDYNIQKESTL 827
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 305 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IVLEVEPSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L++ R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTIALEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+++ R+ +++ + T+ +IF ++TG
Sbjct: 506 LEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L++ R +
Sbjct: 685 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN 744
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 745 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVEPSDTIE 784
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L++ R+L D + + + + +R
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLR 832
>gi|290979754|ref|XP_002672598.1| polyubiquitin [Naegleria gruberi]
gi|284086176|gb|EFC39854.1| polyubiquitin [Naegleria gruberi]
Length = 154
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +I +K KT + L+++ NDT+
Sbjct: 61 IQKESTLHLVL----------RLRGGGMQIFVK---TLTGKT------ITLEVESNDTIE 101
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 102 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 149
>gi|71835909|gb|AAZ42330.1| ubiquitin protein 1 [Caenorhabditis remanei]
Length = 164
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 11 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 70
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 71 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 110
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 111 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 158
>gi|197129059|gb|ACH45557.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
Length = 190
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 34/209 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNV 209
M ++ V T G K I +EV SD +
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTI 175
>gi|222635996|gb|EEE66128.1| hypothetical protein OsJ_22175 [Oryza sativa Japonica Group]
Length = 208
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ +D
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKD 134
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|218198762|gb|EEC81189.1| hypothetical protein OsI_24195 [Oryza sativa Indica Group]
Length = 223
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 39/245 (15%)
Query: 14 TIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVAS 73
T EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++
Sbjct: 8 TCEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 67
Query: 74 DNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIP 133
Q+ + + KT + L+++ +DT+ +K KI + E IP
Sbjct: 68 RGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDKEGIP 107
Query: 134 VNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQ 193
++ + +G +L+D R+L D + + + + +R GM ++ V T
Sbjct: 108 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIFVKTL 154
Query: 194 CGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVG 253
G K I +EV +SD + ++ ++Q +P D I+ ++D R+ +++
Sbjct: 155 TG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQ 208
Query: 254 QGDTI 258
+ T+
Sbjct: 209 KESTL 213
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 71 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 130
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 131 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 170
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 171 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 218
>gi|157138585|ref|XP_001664265.1| ubiquitin [Aedes aegypti]
gi|108880553|gb|EAT44778.1| AAEL003888-PA [Aedes aegypti]
Length = 154
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 82/169 (48%), Gaps = 21/169 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ IK KIE +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEAVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
+ + S + L++ Q+ + + + +D + D+V
Sbjct: 61 VQKGSTLHLVLRLRGGMQIFVKMLT--------------------GRTMAIDTEPEDSVE 100
Query: 121 RLKEKIHE-MESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
L+ KI E +E +P N+L + +G +L+D R+L++ ++ + + + +R
Sbjct: 101 TLRVKISEKLEEMPPNQLRLIFAGKQLEDGRTLQEYSIIKGSTVHLVLR 149
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 74/151 (49%), Gaps = 20/151 (13%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ LD++ DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLDVEAVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYNVQKGSTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKEL-QKLHQRYHFHL 227
G ++ + +LT + + ++ D+V LR ++ +KL + +
Sbjct: 73 LR-----------GGMQIFVKMLT---GRTMAIDTEPEDSVETLRVKISEKLEE-----M 113
Query: 228 PQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
P + I+ ++D R+ + + + +G T+
Sbjct: 114 PPNQLRLIFAGKQLEDGRTLQEYSIIKGSTV 144
>gi|307174680|gb|EFN65063.1| Ubiquitin [Camponotus floridanus]
Length = 154
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|297606280|ref|NP_001058221.2| Os06g0650100 [Oryza sativa Japonica Group]
gi|255677281|dbj|BAF20135.2| Os06g0650100, partial [Oryza sativa Japonica Group]
Length = 177
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 25 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 84
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 85 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 124
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ +D
Sbjct: 125 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKD 158
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 110 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHL 169
Query: 70 LVA 72
++A
Sbjct: 170 VLA 172
>gi|294942504|ref|XP_002783557.1| Ubiquitin D, putative [Perkinsus marinus ATCC 50983]
gi|239896054|gb|EER15353.1| Ubiquitin D, putative [Perkinsus marinus ATCC 50983]
Length = 163
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|182407850|gb|ACB87916.1| polyubiquitin 1 [Malus x domestica]
Length = 208
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GESITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D RSL D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M + V + G K I +EV +S+ + ++ ++Q
Sbjct: 153 M-----HIFVKSLTG-KTITLEVESSETIDNVQAKIQ 183
>gi|115479211|ref|NP_001063199.1| Os09g0420800 [Oryza sativa Japonica Group]
gi|242044708|ref|XP_002460225.1| hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor]
gi|357158453|ref|XP_003578133.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Brachypodium
distachyon]
gi|302393765|sp|P0C030.2|RUB1_ORYSJ RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB1; AltName: Full=OsRUB1; AltName:
Full=Ubiquitin-related protein 1; Flags: Precursor
gi|50725971|dbj|BAD33498.1| polyubiquitin 2 [Oryza sativa Japonica Group]
gi|50726105|dbj|BAD33626.1| polyubiquitin 2 [Oryza sativa Japonica Group]
gi|113631432|dbj|BAF25113.1| Os09g0420800 [Oryza sativa Japonica Group]
gi|125563747|gb|EAZ09127.1| hypothetical protein OsI_31396 [Oryza sativa Indica Group]
gi|215704536|dbj|BAG94169.1| unnamed protein product [Oryza sativa Japonica Group]
gi|241923602|gb|EER96746.1| hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor]
gi|326513616|dbj|BAJ87827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ +D
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKD 134
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|340377353|ref|XP_003387194.1| PREDICTED: hypothetical protein LOC100638471 [Amphimedon
queenslandica]
Length = 541
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
+D+ E G + + V F+T+L IK KI+K +GIPV +Q L++ L DD +E C
Sbjct: 104 IDLTIEAVTGTVYDLCVSPFETILGIKTKIQKLEGIPVSQQHLIYGSTELMDDLCLEECH 163
Query: 61 ILQNSRIQLLVASDNKP 77
+ S+++L++A P
Sbjct: 164 VRSGSQLKLVIAMRGGP 180
>gi|123718340|emb|CAL30085.1| polyubiquitin [Globodera pallida]
Length = 154
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|5523979|gb|AAD44042.1|AF104025_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 432
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 224 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 283
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 284 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 323
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 324 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 371
>gi|1107481|emb|CAA60629.1| unnamed protein product [Acanthamoeba sp. 4b3]
Length = 172
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|297823361|ref|XP_002879563.1| hypothetical protein ARALYDRAFT_482524 [Arabidopsis lyrata subsp.
lyrata]
gi|297325402|gb|EFH55822.1| hypothetical protein ARALYDRAFT_482524 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ +D
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKD 134
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|30692436|ref|NP_564379.2| NEDD8-like protein RUB1 [Arabidopsis thaliana]
gi|302393813|sp|Q9SHE7.3|RUB1_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB1; AltName: Full=Ubiquitin-related protein 1;
Short=AtRUB1; Flags: Precursor
gi|6692129|gb|AAF24594.1|AC007654_10 T19E23.13 [Arabidopsis thaliana]
gi|28973676|gb|AAO64156.1| putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
gi|29824269|gb|AAP04095.1| putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
gi|110737109|dbj|BAF00506.1| putative ubiquitin [Arabidopsis thaliana]
gi|312283039|dbj|BAJ34385.1| unnamed protein product [Thellungiella halophila]
gi|332193223|gb|AEE31344.1| NEDD8-like protein RUB1 [Arabidopsis thaliana]
Length = 156
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ +D
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKD 134
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|6934302|gb|AAF31707.1|AF221858_1 polyubiquitin [Euphorbia esula]
Length = 215
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 39/244 (15%)
Query: 15 IEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASD 74
+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++
Sbjct: 1 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 60
Query: 75 NKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPV 134
Q+ + + KT + L+++ +DT+ +K KI + E IP
Sbjct: 61 GGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDKEGIPP 100
Query: 135 NRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQC 194
++ + +G +L+D R+L D + + + + +R GM ++ V T
Sbjct: 101 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIFVKTLT 147
Query: 195 GNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQ 254
G K I +EV +SD + ++ ++Q +P D I+ ++D R+ +++ +
Sbjct: 148 G-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQK 201
Query: 255 GDTI 258
T+
Sbjct: 202 ESTL 205
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 63 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 122
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 123 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 162
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 163 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 210
>gi|124784679|gb|ABN14988.1| polyubiquitin [Taenia asiatica]
Length = 251
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 34/216 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 62 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 121
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 122 IQKESTLHLVLRMRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 161
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 162 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 213
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKEL 216
M ++ V T G K I +EV SD++ ++ ++
Sbjct: 214 M-----QIFVKTLTG-KTITLEVEPSDSIENVKAKI 243
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 118/262 (45%), Gaps = 49/262 (18%)
Query: 16 EVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDN 75
EV D++ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++
Sbjct: 1 EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 60
Query: 76 KPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVN 135
Q+ + + KT + L+++ +D++ +K KI + E IP +
Sbjct: 61 GMQIFVKTLT--------------GKT------ITLEVEPSDSIENVKAKIQDKEGIPPD 100
Query: 136 RLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCG 195
+ + +G +L+D R+L D + + + + +R GM ++ V T G
Sbjct: 101 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------MRGGM-----QIFVKTLTG 147
Query: 196 NKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQG 255
K I +EV SD + ++ ++Q +P D I+ ++D R+ +++ +
Sbjct: 148 -KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 201
Query: 256 DTI----------EIFNGSVTG 267
T+ +IF ++TG
Sbjct: 202 STLHLVLRLRGGMQIFVKTLTG 223
>gi|567767|gb|AAA53067.1| p125 protein, partial [Bovine viral diarrhea virus 1]
Length = 1054
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 347 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 406
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 407 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 446
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 447 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 494
>gi|242093754|ref|XP_002437367.1| hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]
gi|357123249|ref|XP_003563324.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Brachypodium
distachyon]
gi|302393766|sp|P0C031.2|RUB2_ORYSJ RecName: Full=Ubiquitin-NEDD8-like protein RUB2; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB2; AltName: Full=OsRUB2; AltName:
Full=Ubiquitin-related protein 2; Flags: Precursor
gi|51534981|dbj|BAD38105.1| polyubiquitin 2 [Oryza sativa Japonica Group]
gi|215692861|dbj|BAG88281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186299|gb|EEC68726.1| hypothetical protein OsI_37226 [Oryza sativa Indica Group]
gi|218198663|gb|EEC81090.1| hypothetical protein OsI_23921 [Oryza sativa Indica Group]
gi|241915590|gb|EER88734.1| hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]
Length = 153
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ +D
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKD 134
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|297846540|ref|XP_002891151.1| hypothetical protein ARALYDRAFT_473638 [Arabidopsis lyrata subsp.
lyrata]
gi|297336993|gb|EFH67410.1| hypothetical protein ARALYDRAFT_473638 [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ +D
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKD 134
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|326504848|dbj|BAK06715.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DTV +K KI+ +GIP +Q L+F G+ L D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ +D
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKD 134
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|226473064|emb|CAX71218.1| polyubiquitin [Schistosoma japonicum]
Length = 194
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 34/213 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
M ++ V T G K I +EV SD + ++
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVK 179
>gi|18403909|ref|NP_565812.1| NEDD8-like protein RUB2 [Arabidopsis thaliana]
gi|302393809|sp|Q8RUC6.3|RUB2_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB2; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB2; AltName: Full=Ubiquitin-related protein 2;
Short=AtRUB2; Flags: Precursor
gi|18650605|gb|AAL75902.1| At1g31340/T19E23_4 [Arabidopsis thaliana]
gi|20147417|gb|AAM10418.1| At1g31340/T19E23_4 [Arabidopsis thaliana]
gi|20197530|gb|AAM15116.1| ubiquitin-like UBQ7/AtRUB2, putative [Arabidopsis thaliana]
gi|26452375|dbj|BAC43273.1| ubiquitin-like protein [Arabidopsis thaliana]
gi|330254040|gb|AEC09134.1| NEDD8-like protein RUB2 [Arabidopsis thaliana]
Length = 154
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ +D
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKD 134
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|449444274|ref|XP_004139900.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
gi|449532435|ref|XP_004173186.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
Length = 154
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ +D
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKD 134
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|302393764|sp|P0C073.2|RUB1_DESAN RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB1; AltName: Full=DaRUB1; AltName:
Full=Ubiquitin-related protein 1; Flags: Precursor
gi|20562909|gb|AAM22748.1| polyubiquitin 2 [Deschampsia antarctica]
Length = 153
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ +D
Sbjct: 101 RVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKD 134
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ +KE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|402471724|gb|EJW05300.1| polyubiquitin [Edhazardia aedis USNM 41457]
Length = 153
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|90076064|dbj|BAE87712.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 33/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+E DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEAEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
+K L K I +EV SD + ++ ++Q
Sbjct: 153 DAVSYVKTLT-----GKTITLEVEPSDTIENVKAKIQ 184
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 19/133 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ V ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGDAVSYVKTLTGKTITLEVE-PS------------------DTIE 177
Query: 121 RLKEKIHEMESIP 133
+K KI + E IP
Sbjct: 178 NVKAKIQDKEGIP 190
>gi|578550|emb|CAA80336.1| ubiquitin [Tetrahymena pyriformis]
Length = 225
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 113/252 (44%), Gaps = 43/252 (17%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ ++K I+ +GI + +Q L+ G+ L++ R + + I S +QL
Sbjct: 10 GKTMTLEVTHSDTIEKVKSLIQNKEGILIEQQRLLHTGKNLENQRTLSYYSIQIQSTLQL 69
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
+ Q+ Q+ K I LD+ ++T+ +K I +
Sbjct: 70 EIRQSGVMQIFV-QTLAGKTI-------------------TLDVTSSNTINDIKSMISDK 109
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELM-DNAEIDVHVRPSPTATSTTSSGMGPRKLKL 188
ESIP + L +G L++ R+L D + +N V +R S +K+
Sbjct: 110 ESIPPDELRFIFAGKFLEEERTLSDLNIQKENTLHLVLIRVS---------------MKI 154
Query: 189 LVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFR 248
V T C K +EV+ SDN+ ++ ++Q +P D I+ ++D+++
Sbjct: 155 FVRTLC--KIFTLEVDPSDNIKTVKTKIQDKE-----GIPSDQLKLIFSGTKLEDEKTLS 207
Query: 249 WHHVGQGDTIEI 260
+++ + T+ +
Sbjct: 208 SYNIQKDSTLNL 219
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 22/167 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V +T+ +IK I + IP + +F G+ L+++R +
Sbjct: 77 MQIFVQTLAGKTITLDVTSSNTINDIKSMISDKESIPPDELRFIFAGKFLEEERTLSDLN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + + + L++ ++ +KI + + K L++D +D +
Sbjct: 137 IQKENTLHLVLI----------------RVSMKIFVRTLCKI------FTLEVDPSDNIK 174
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHV 167
+K KI + E IP ++L + SG +L+D ++L + ++ +++ +
Sbjct: 175 TVKTKIQDKEGIPSDQLKLIFSGTKLEDEKTLSSYNIQKDSTLNLVI 221
>gi|168036461|ref|XP_001770725.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677943|gb|EDQ64407.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 153
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPYDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G ++ D ++ RD
Sbjct: 101 RIKERVEEKEGIPPVQQRLIFAGKQMNDDKTARD 134
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ +DT+ IKE++E+ +GIP +Q L+F G+ + DD+ I S + L
Sbjct: 86 GKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLIFAGKQMNDDKTARDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +D++ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
G +K+ LT K I +++ D + ++ +++ ++
Sbjct: 73 LR-----------GGTMIKVKTLT---GKEIEIDIEPYDTIERIK---ERVEEKEGIPPV 115
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
Q F KQ M+DD++ R +++ G +
Sbjct: 116 QQRLIFAGKQ--MNDDKTARDYNIEGGSVL 143
>gi|290991538|ref|XP_002678392.1| polyubiquitin [Naegleria gruberi]
gi|284092004|gb|EFC45648.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + G+ T+EV D++ +K+K++ +GI +Q L+F G+ L+D R +
Sbjct: 1 MQLFVKTLTGRTITLEVESNDSIENVKQKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60
Query: 61 ILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDT 118
I ++S + L++ Q VKT KT + ++M+ NDT
Sbjct: 61 IQKDSTLHLVLRLRGGMQLFVKT----------------LTGKT------ITIEMESNDT 98
Query: 119 VLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
V +K+KI + E IP ++ + +G +L+D R++ D L ++ + + +R
Sbjct: 99 VENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRTIGDYNLQKDSTVHLVLR 148
>gi|400599610|gb|EJP67307.1| Ubiquitin subgroup [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTT 177
+K KI + E IP ++ + +G +L+D R+L D + + + + +R +S T
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGVESSDT 157
>gi|353237461|emb|CCA69433.1| related to UBI4-Ubiquitin [Piriformospora indica DSM 11827]
Length = 195
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 36/197 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLV-----------------------ASDNKPQVKTEQSSPSKKIHLKINIP 97
I + S + L++ +SD VKT KI K IP
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT-------KIQDKEGIP 113
Query: 98 SNSKTHH------HHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRS 151
+ + + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+
Sbjct: 114 PDQQRMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRT 173
Query: 152 LRDCELMDNAEIDVHVR 168
L D + + + + +R
Sbjct: 174 LSDYNIQKESTLHLVLR 190
>gi|1684857|gb|AAB36546.1| polyubiquitin [Phaseolus vulgaris]
Length = 215
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 39/244 (15%)
Query: 15 IEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASD 74
+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++
Sbjct: 1 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 60
Query: 75 NKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPV 134
Q+ + + KT + L+++ +DT+ +K KI + E IP
Sbjct: 61 GGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDKEGIPP 100
Query: 135 NRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQC 194
++ + +G +L+D R+L D + + + + +R GM ++ V T
Sbjct: 101 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIFVKTLT 147
Query: 195 GNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQ 254
G K I +EV +SD + ++ ++Q +P D I+ ++D R+ +++ +
Sbjct: 148 G-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQK 201
Query: 255 GDTI 258
T+
Sbjct: 202 ESTL 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 63 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 122
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 123 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 162
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 163 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 210
>gi|374073976|pdb|2Y5B|B Chain B, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
gi|374073978|pdb|2Y5B|F Chain F, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
Length = 152
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPS-NSKTHHHHHHLPLDMDVNDTV 119
I + S + L++ H++I + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRG---------------HMQIFVKTLTGKT------ITLEVEPSDTI 99
Query: 120 LRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 100 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|148905884|gb|ABR16104.1| unknown [Picea sitchensis]
gi|224286933|gb|ACN41169.1| unknown [Picea sitchensis]
Length = 153
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLDDGRSLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESSLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G ++ D ++ RD
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQMNDDKTARD 134
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ + DD+ I S + L
Sbjct: 86 GKEIEIDIEPTDTIERIKERVEEKEGIPPVQQRLIYAGKQMNDDKTARDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +D++ +K KI + E IP ++ + +G +L D RSL D + + + + +R
Sbjct: 13 ITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLDDGRSLADYNIQKESSLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
G +K+ LT K I +++ +D + +++ +++ +P
Sbjct: 73 LR-----------GGTMIKVKTLT---GKEIEIDIEPTDTIERIKERVEEKE-----GIP 113
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
IY M+DD++ R +++ G +
Sbjct: 114 PVQQRLIYAGKQMNDDKTARDYNIEGGSVL 143
>gi|320162850|gb|EFW39749.1| polyubiquitin 5 [Capsaspora owczarzaki ATCC 30864]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
+K KI + E IP ++ + +G +L+D R+L D
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134
>gi|54610299|gb|AAV35212.1| polyubiquitin-like protein [Schistosoma japonicum]
Length = 156
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 4 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 63
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 64 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 103
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + A + + +R
Sbjct: 104 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEATLHLVLR 151
>gi|388508634|gb|AFK42383.1| unknown [Medicago truncatula]
Length = 153
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + V +G +L D ++ ++
Sbjct: 101 RIKERVEEKEGIPPVQQRVIYAGKQLADDKTAKE 134
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q +++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRVIYAGKQLADDKTAKEYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|290974830|ref|XP_002670147.1| ubiquitin [Naegleria gruberi]
gi|284083703|gb|EFC37403.1| ubiquitin [Naegleria gruberi]
Length = 152
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 24/170 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + G+ T+EV D++ +K K++ +GI +Q L+F G+ L+D R +
Sbjct: 1 MQLFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60
Query: 61 ILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDT 118
I ++S + L++ Q VKT KT + ++M+ NDT
Sbjct: 61 IQKDSTLHLVLRLRGGMQLFVKT----------------LTGKT------ITIEMESNDT 98
Query: 119 VLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
V +K+KI + E IP ++ + +G +L+D R++ D L ++ + + +R
Sbjct: 99 VENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRTINDYNLQKDSTVHLVLR 148
>gi|6650740|gb|AAF21992.1| polyubiquitin [Lilium longiflorum]
Length = 153
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDREGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IHKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTAT 174
+K KIH+ E IP L+ + AE D R+L D + + + + +R AT
Sbjct: 101 NVKAKIHDKEGIPPTTRLIFAGTAE--DGRTLADYNIQKESTLHLVLRLRGGAT 152
>gi|39939489|gb|AAR32784.1| polyubiquitin [Clusia minor]
Length = 223
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 29 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 88
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 89 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 128
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 129 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 176
>gi|340382247|ref|XP_003389632.1| PREDICTED: hypothetical protein LOC100638437 [Amphimedon
queenslandica]
Length = 1307
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 26/163 (15%)
Query: 4 IFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRD--VEHCEI 61
I RG T+ V DTV +IK KI++ IPV KQ L+F+G+ L ++ + V C+I
Sbjct: 10 ILSGTRGATVTLLVDELDTVKDIKLKIQQEANIPVAKQKLLFDGRTLSEELNCTVTDCDI 69
Query: 62 LQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLR 121
+ + I L+V + + + + + +N+ V DT+
Sbjct: 70 FEQATIFLVVLT-----IISIRFVTGEIFSTDVNL------------------VADTIET 106
Query: 122 LKEKIHEMESIPVNRLLVQSSGAELQDHRS-LRDCELMDNAEI 163
+K+ I E +P+N+ + G EL D S L DC++ D + I
Sbjct: 107 IKQSIEERNGVPLNQQCLIFKGKELNDDLSTLSDCKIEDGSVI 149
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 25/150 (16%)
Query: 10 GKAFTIEVGFF-DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDD-RDVEHCEILQNSRI 67
G+ F+ +V DT+ IK+ IE+ G+P+ +Q L+F G+ L DD + C+I S I
Sbjct: 90 GEIFSTDVNLVADTIETIKQSIEERNGVPLNQQCLIFKGKELNDDLSTLSDCKIEDGSVI 149
Query: 68 QLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIH 127
T + + S +I +K +P + H+ L + DT+ +K I
Sbjct: 150 LF-----------TIKGAISFQISIK-TLP----IYSGKDHIKLIVKSTDTIAHVKAMIV 193
Query: 128 EMESIPVNRLLVQSSG-------AELQDHR 150
E IP+N+ + +G A L DH+
Sbjct: 194 AKEGIPINKQCLIFNGKHIYADDATLADHK 223
>gi|92790176|emb|CAI83757.1| Polyubiqutin 4 [Polyplastron multivesiculatum]
Length = 177
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 25 MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 84
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 85 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTID 124
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 125 NVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 172
>gi|226532866|ref|NP_001148606.1| LOC100282222 [Zea mays]
gi|194700092|gb|ACF84130.1| unknown [Zea mays]
gi|195619630|gb|ACG31645.1| polyubiquitin 2 [Zea mays]
gi|195620202|gb|ACG31931.1| polyubiquitin 2 [Zea mays]
gi|195620238|gb|ACG31949.1| polyubiquitin 2 [Zea mays]
gi|195620732|gb|ACG32196.1| polyubiquitin 2 [Zea mays]
gi|195620942|gb|ACG32301.1| polyubiquitin 2 [Zea mays]
gi|195628320|gb|ACG35990.1| polyubiquitin 2 [Zea mays]
gi|414885492|tpg|DAA61506.1| TPA: polyubiquitin 2 isoform 1 [Zea mays]
gi|414885493|tpg|DAA61507.1| TPA: polyubiquitin 2 isoform 2 [Zea mays]
Length = 153
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DTV +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ D++
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDSID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ +D
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKD 134
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ D++ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDSIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|325302604|tpg|DAA34466.1| TPA_exp: ubiquitin [Amblyomma variegatum]
Length = 194
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 34/213 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 16 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 75
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 76 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 115
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 116 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 167
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
M ++ V T G K I +EV SD + ++
Sbjct: 168 M-----QIFVKTLTG-KTITLEVEPSDTIENVK 194
>gi|625174|gb|AAC84175.1| ubiquitin [Artemia franciscana]
Length = 225
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 43/252 (17%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVK 80
DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+
Sbjct: 4 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 63
Query: 81 TEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQ 140
++ K I L++ PS DT+ +K KI + E IP ++ +
Sbjct: 64 V-KTLTGKTITLEVE-PS------------------DTIENVKAKIQDKEGIPPDQQRLI 103
Query: 141 SSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIP 200
+G +L+D R+L D + + + + +R GM ++ V T G K I
Sbjct: 104 FAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTIT 149
Query: 201 VEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEI 260
+EV SD + ++ ++Q +P D I+ ++D R+ +++ + T+ +
Sbjct: 150 LEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 204
Query: 261 F----NGSVTGG 268
G+ T G
Sbjct: 205 VLRLRGGTQTSG 216
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 60 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 119
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 120 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 159
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 160 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 207
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 29/162 (17%)
Query: 116 NDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATS 175
+DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 3 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR------- 55
Query: 176 TTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFI 235
GM ++ V T G K I +EV SD + ++ ++Q +P D I
Sbjct: 56 -LRGGM-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLI 103
Query: 236 YKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+ ++D R+ +++ + T+ +IF ++TG
Sbjct: 104 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 145
>gi|4150914|emb|CAA72800.1| polyubiquitin precursor [Suberites domuncula]
Length = 147
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 4 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 63
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 64 VLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIENVKAKIQDK 103
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 104 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 142
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 71 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 130
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 131 IQKESTLHLVL 141
>gi|355753795|gb|EHH57760.1| Polyubiquitin-C [Macaca fascicularis]
Length = 153
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F GQ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTLENVKAKIQDKEGIPPDQQRLIFAGQQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|290971589|ref|XP_002668572.1| polyubiquitin [Naegleria gruberi]
gi|290973569|ref|XP_002669520.1| polyubiquitin [Naegleria gruberi]
gi|290982657|ref|XP_002674046.1| polyubiquitin [Naegleria gruberi]
gi|290987245|ref|XP_002676333.1| polyubiquitin [Naegleria gruberi]
gi|290987329|ref|XP_002676375.1| polyubiquitin [Naegleria gruberi]
gi|290997377|ref|XP_002681258.1| polyubiquitin [Naegleria gruberi]
gi|284082037|gb|EFC35828.1| polyubiquitin [Naegleria gruberi]
gi|284083069|gb|EFC36776.1| polyubiquitin [Naegleria gruberi]
gi|284087634|gb|EFC41302.1| polyubiquitin [Naegleria gruberi]
gi|284089935|gb|EFC43589.1| polyubiquitin [Naegleria gruberi]
gi|284089977|gb|EFC43631.1| polyubiquitin [Naegleria gruberi]
gi|284094881|gb|EFC48514.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 24/170 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + G+ T+EV D++ +K K++ +GI +Q L+F G+ L+D R +
Sbjct: 1 MQLFVKTLTGRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60
Query: 61 ILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDT 118
I ++S + L++ Q VKT KT + ++M+ NDT
Sbjct: 61 IQKDSTLHLVLRLRGGMQLFVKT----------------LTGKT------ITIEMESNDT 98
Query: 119 VLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
V +K+KI + E IP ++ + +G +L+D R++ D L ++ + + +R
Sbjct: 99 VENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRTIGDYNLQKDSTVHLVLR 148
>gi|224321|prf||1101405A ubiquitin precursor
Length = 191
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 39 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 98
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 99 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 138
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 139 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 186
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 98/219 (44%), Gaps = 39/219 (17%)
Query: 40 KQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSN 99
+Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 2 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-------------- 47
Query: 100 SKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMD 159
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D +
Sbjct: 48 GKT------ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 101
Query: 160 NAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKL 219
+ + + +R GM ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 102 ESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDK 147
Query: 220 HQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
+P D I+ ++D R+ +++ + T+
Sbjct: 148 E-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 181
>gi|73747822|gb|AAZ82816.1| ubiquitin monomer protein [Morus mongolica]
Length = 152
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVIR 148
>gi|372467011|pdb|3U30|A Chain A, Crystal Structure Of A Linear-Specific Ubiquitin Fab Bound
To Linear Ubiquitin
gi|372467014|pdb|3U30|D Chain D, Crystal Structure Of A Linear-Specific Ubiquitin Fab Bound
To Linear Ubiquitin
Length = 172
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 80
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 81 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 120
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 121 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 168
>gi|365759560|gb|EHN01342.1| Ubi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297682|gb|EIW08781.1| Ubi4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 153
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|159486707|ref|XP_001701379.1| bi-ubiquitin, major isoform [Chlamydomonas reinhardtii]
gi|158271681|gb|EDO97495.1| bi-ubiquitin, major isoform [Chlamydomonas reinhardtii]
Length = 153
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|363756558|ref|XP_003648495.1| hypothetical protein Ecym_8408 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891695|gb|AET41678.1| Hypothetical protein Ecym_8408 [Eremothecium cymbalariae
DBVPG#7215]
Length = 153
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|21554192|gb|AAM63271.1| unknown [Arabidopsis thaliana]
Length = 154
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQXLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|403217874|emb|CCK72367.1| hypothetical protein KNAG_0J02880 [Kazachstania naganishii CBS
8797]
Length = 153
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|302851086|ref|XP_002957068.1| polyubiquitin [Volvox carteri f. nagariensis]
gi|300257624|gb|EFJ41870.1| polyubiquitin [Volvox carteri f. nagariensis]
Length = 153
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|226477466|emb|CAX72427.1| polyubiquitin [Schistosoma japonicum]
Length = 170
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|5523969|gb|AAD44037.1|AF104020_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 318
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP ++ L+F G+ L+D R +
Sbjct: 110 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQRRLIFAGKQLEDGRTLSDYN 169
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 170 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 209
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 210 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 257
>gi|1101011|gb|AAC46935.1| polyubiquitin, partial [Trichomonas vaginalis]
Length = 770
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + ++K KI+ +GIP +Q L+F G+ L+D ++
Sbjct: 10 MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 69
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + H+ L+++ D +
Sbjct: 70 IQKDSTLHLVLRLRGGMQIFVKTLTGK--------------------HITLEVEPTDRIE 109
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D +L+D + ++ + + +R G
Sbjct: 110 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR--------LRGG 161
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +D + +++ ++Q +P D I+
Sbjct: 162 M-----QIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKE-----GIPPDQQRLIFAGKQ 210
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D + + + + + T+ +IF ++TG
Sbjct: 211 LEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTG 247
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + ++K KI+ +GIP +Q L+F G+ L+D ++
Sbjct: 162 MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 221
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + H+ L+++ D +
Sbjct: 222 IQKDSTLHLVLRLRGGMQIFVKTLTGK--------------------HITLEVEPTDRIE 261
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D +L+D + ++ + + +R G
Sbjct: 262 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR--------LRGG 313
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +D + +++ ++Q +P D I+
Sbjct: 314 M-----QIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKE-----GIPPDQQRLIFAGKQ 362
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D + + + + + T+ +IF ++TG
Sbjct: 363 LEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTG 399
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + ++K KI+ +GIP +Q L+F G+ L+D ++
Sbjct: 314 MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 373
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + H+ L+++ D +
Sbjct: 374 IQKDSTLHLVLRLRGGMQIFVKTLTGK--------------------HITLEVEPTDRIE 413
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D +L+D + ++ + + +R G
Sbjct: 414 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR--------LRGG 465
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +D + +++ ++Q +P D I+
Sbjct: 466 M-----QIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKE-----GIPPDQQRLIFAGKQ 514
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D + + + + + T+ +IF ++TG
Sbjct: 515 LEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTG 551
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + ++K KI+ +GIP +Q L+F G+ L+D ++
Sbjct: 466 MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 525
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + H+ L+++ D +
Sbjct: 526 IQKDSTLHLVLRLRGGMQIFVKTLTGK--------------------HITLEVEPTDRIE 565
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D +L+D + ++ + + +R G
Sbjct: 566 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR--------LRGG 617
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +D + +++ ++Q +P D I+
Sbjct: 618 M-----QIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKE-----GIPPDQQRLIFAGKQ 666
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D + + + + + T+ +IF ++TG
Sbjct: 667 LEDGNTLQDYSIQKDSTLHLVLRLRGGMQIFVKTLTG 703
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + ++K KI+ +GIP +Q L+F G+ L+D ++
Sbjct: 618 MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 677
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + H+ L+++ D +
Sbjct: 678 IQKDSTLHLVLRLRGGMQIFVKTLTGK--------------------HITLEVEPTDRIE 717
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI E IP ++ + +G +L+D ++L+D + ++ + + +R
Sbjct: 718 DVKAKIQVKEGIPPDQQGLIFAGKQLEDGKTLQDYSIQKDSTLHLVLR 765
>gi|86370988|gb|ABC94632.1| ubiquitin C [Ictalurus punctatus]
Length = 192
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 99
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 100 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIG 139
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 140 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 40 KQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSN 99
+Q L+F G+ L+D R + I + S + L++ Q+ ++ K I L++ PS
Sbjct: 3 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS- 59
Query: 100 SKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMD 159
DT+ +K KI + E IP ++ + +G +L+D R+L D +
Sbjct: 60 -----------------DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 102
Query: 160 NAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKL 219
+ + + +R GM ++ V T G K I +EV SD + ++ ++Q
Sbjct: 103 ESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVEPSDTIGNVKAKIQDK 148
Query: 220 HQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
+P D I+ ++D R+ +++ + T+
Sbjct: 149 E-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 182
>gi|388571222|gb|AFK73707.1| ubiquitin [Ostrea edulis]
Length = 153
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDRQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|270300599|gb|ACZ69386.1| polyubiquitin UBQ14 [Cucumis sativus]
Length = 197
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 45 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 104
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 105 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 144
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 145 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 192
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 39/225 (17%)
Query: 34 QGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLK 93
+GIP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 2 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT-------- 53
Query: 94 INIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLR 153
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L
Sbjct: 54 ------GKT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 101
Query: 154 DCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
D + + + + +R GM ++ V T G K I +EV +SD + ++
Sbjct: 102 DYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVK 147
Query: 214 KELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
++Q +P D I+ ++D R+ +++ + T+
Sbjct: 148 AKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 187
>gi|40647164|gb|AAR88388.1| polyubiquitin 3, partial [Plasmodiophora brassicae]
Length = 175
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 32/204 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD+D D + +K KI +
Sbjct: 63 VL----------RLRGGTMQIFVK---TLTGKT------ITLDVDSGDAIETVKAKIQDK 103
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R + +++
Sbjct: 104 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR------------LRGGTMQIF 151
Query: 190 VLTQCGNKRIPVEVNASDNVSELR 213
V T G K I ++V++ D + ++
Sbjct: 152 VKTLTG-KTITLDVDSGDTIETVK 174
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 71 MQIFVKTLTGKTITLDVDSGDAIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 130
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 131 IQKESTLHLVL 141
>gi|212851|gb|AAA49129.1| ubiquitin polyprotein (heat shock related), partial [Gallus gallus]
Length = 157
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 64
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 65 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 104
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 105 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 152
>gi|302595966|sp|P0CG83.1|UBIQP_HORVU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|755763|emb|CAA27751.1| unnamed protein product [Hordeum vulgare subsp. vulgare]
Length = 171
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 19 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 78
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 79 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 118
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 119 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 166
>gi|149391401|gb|ABR25718.1| polyubiquitin containing 7 ubiquitin monomers [Oryza sativa Indica
Group]
Length = 178
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 26 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 85
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 86 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 125
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 126 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 173
>gi|114152964|gb|ABI52648.1| ubiquitin/40S ribosomal protein S27a fusion protein [Argas
monolakensis]
Length = 232
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|56199554|gb|AAV84266.1| ubiquitin [Culicoides sonorensis]
Length = 191
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 98
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 99 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 138
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 139 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 186
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 40 KQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSN 99
+Q L+F G+ L+D R + I + S + L++ Q+ ++ K I L++ PS
Sbjct: 2 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS- 58
Query: 100 SKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMD 159
DT+ +K KI + E IP ++ + +G +L+D R+L D +
Sbjct: 59 -----------------DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 101
Query: 160 NAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKL 219
+ + + +R GM ++ V T G K I +EV SD + ++ ++Q
Sbjct: 102 ESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDK 147
Query: 220 HQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
+P D I+ ++D R+ +++ + T+
Sbjct: 148 E-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 181
>gi|1326022|emb|CAA25706.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 191
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 39 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 98
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 99 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 138
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 139 NVKSKIQDKEGIPPDQQRLIFAGNQLEDGRTLSDYNIQKESTLHLVLR 186
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 99/219 (45%), Gaps = 39/219 (17%)
Query: 40 KQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSN 99
+Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 2 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-------------- 47
Query: 100 SKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMD 159
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D +
Sbjct: 48 GKT------ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 101
Query: 160 NAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKL 219
+ + + +R GM ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 102 ESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDK 147
Query: 220 HQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
+P D I+ N ++D R+ +++ + T+
Sbjct: 148 E-----GIPPDQQRLIFAGNQLEDGRTLSDYNIQKESTL 181
>gi|27734329|gb|AAM51193.1| polyubiquitin [Haynesina germanica]
Length = 175
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 32/204 (15%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ + +I +K KT + LD++ NDT+ +K KI +
Sbjct: 63 VL----------RLRGGAMQIFVKT---LTGKT------ITLDVEPNDTIQNVKAKIQDK 103
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP + + +G +L+D R+L D + + + + +R A +++
Sbjct: 104 EGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA------------MQIF 151
Query: 190 VLTQCGNKRIPVEVNASDNVSELR 213
V T G K I ++V +D + ++
Sbjct: 152 VKTLTG-KTITLDVEPNDTIQNVK 174
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 71 MQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYN 130
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 131 IQKESTLHLVL 141
>gi|238580222|ref|XP_002389222.1| hypothetical protein MPER_11681 [Moniliophthora perniciosa FA553]
gi|215451253|gb|EEB90152.1| hypothetical protein MPER_11681 [Moniliophthora perniciosa FA553]
Length = 153
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|367006115|ref|XP_003687789.1| hypothetical protein TPHA_0K02250 [Tetrapisispora phaffii CBS 4417]
gi|357526094|emb|CCE65355.1| hypothetical protein TPHA_0K02250 [Tetrapisispora phaffii CBS 4417]
Length = 153
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|28189917|dbj|BAC56573.1| similar to polyubiquitin [Bos taurus]
Length = 171
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 10 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 69
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 70 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 109
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 110 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 157
>gi|386278574|gb|AFJ04519.1| ubiquitin, partial [Vernicia fordii]
Length = 176
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 24 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 83
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 84 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 123
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 124 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 171
>gi|71033201|ref|XP_766242.1| ubiquitin [Theileria parva strain Muguga]
gi|68353199|gb|EAN33959.1| ubiquitin, putative [Theileria parva]
Length = 155
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|29836445|gb|AAM78180.1| putative polyubiquitin [Gossypium herbaceum]
gi|29836447|gb|AAM78181.1| putative polyubiquitin [Gossypium raimondii]
gi|29836449|gb|AAM78182.1| putative polyubiquitin [Gossypium barbadense]
gi|29836451|gb|AAM78183.1| putative polyubiquitin [Gossypium barbadense]
gi|29836453|gb|AAM78184.1| putative polyubiquitin [Gossypioides kirkii]
Length = 204
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 52 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 111
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 112 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 151
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 152 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 199
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 26 IKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSS 85
+K KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 1 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT 60
Query: 86 PSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAE 145
KT + L+++ +DT+ +K KI + E IP ++ + +G +
Sbjct: 61 --------------GKT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 100
Query: 146 LQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNA 205
L+D R+L D + + + + +R GM ++ V T G K I +EV +
Sbjct: 101 LEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVES 146
Query: 206 SDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
SD + ++ ++Q +P D I+ ++D R+ +++ + T+
Sbjct: 147 SDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 194
>gi|326522440|dbj|BAK07682.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 293
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 18/166 (10%)
Query: 4 IFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDR-DVEHCEIL 62
+ E G+ T+EV DT+ ++K KIE +G P +Q L+F + L D + +E I
Sbjct: 141 VMETLEGRTITLEVDSLDTIDKVKAKIEDIEGFPKVQQCLIFANKQLDDGKLTLEDHNIG 200
Query: 63 QNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRL 122
+ S + L++ N P+ + L I + + L L + +DT+ +
Sbjct: 201 KGSTLLLILLPCN----------PTVVMELFIKM-------WRGNTLTLKVGRSDTIGSV 243
Query: 123 KEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
K KI+E + IP + + +G +L+DHR+L D ++ + I + R
Sbjct: 244 KVKIYEHDGIPPRQQRLIFAGTQLEDHRTLADYKIQQESTIHLAGR 289
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ + RG T++VG DT+ +K KI ++ GIP +Q L+F G L+D R + +
Sbjct: 218 MELFIKMWRGNTLTLKVGRSDTIGSVKVKIYEHDGIPPRQQRLIFAGTQLEDHRTLADYK 277
Query: 61 ILQNSRIQL 69
I Q S I L
Sbjct: 278 IQQESTIHL 286
>gi|82512|pir||PS0380 ubiquitin precursor - rice (fragment)
gi|218189|dbj|BAA02241.1| poly-ubiquitin [Oryza sativa Japonica Group]
Length = 189
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 37 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 96
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 97 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 136
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 137 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 184
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 97/218 (44%), Gaps = 39/218 (17%)
Query: 41 QTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNS 100
Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT--------------G 46
Query: 101 KTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDN 160
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D +
Sbjct: 47 KT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 100
Query: 161 AEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLH 220
+ + + +R GM ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 101 STLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE 146
Query: 221 QRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
+P D I+ ++D R+ +++ + T+
Sbjct: 147 -----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 179
>gi|254540256|gb|ACT66230.1| polyubiquitin protein [Piriformospora indica]
Length = 196
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 34/208 (16%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
+ T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 1 ARGITLEVESSDTMDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 60
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + + L+++ +DT+ +K KI +
Sbjct: 61 VLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTIDNVKTKIQDK 100
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 101 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 147
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQ 217
V T G K I +EV +SD + ++ ++Q
Sbjct: 148 VKTLTG-KTITLEVESSDTIDNVKTKIQ 174
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 22/146 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 68 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 127
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 128 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 167
Query: 121 RLKEKIHEMESIPVN--RLLVQSSGA 144
+K KI + E IP + RL+ A
Sbjct: 168 NVKTKIQDKEGIPPDQQRLIFAGQAA 193
>gi|339232978|ref|XP_003381606.1| ubiquitin family protein [Trichinella spiralis]
gi|316979561|gb|EFV62340.1| ubiquitin family protein [Trichinella spiralis]
Length = 315
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 67 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 126
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DTV
Sbjct: 127 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTVE 166
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 167 NVKGKIQDKEGIPPDQQRLIFAGKQLEDSRTLSDYNIQKESTLHLVLR 214
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVK 80
DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+
Sbjct: 11 DTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 70
Query: 81 TEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQ 140
+ + KT + L+++ +DT+ +K KI + E IP ++ +
Sbjct: 71 VKTLT--------------GKT------ITLEVEPSDTIENVKGKIQDKEGIPPDQQRLI 110
Query: 141 SSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIP 200
+G +L+D R+L D + + + + +R GM ++ V T G K I
Sbjct: 111 FAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTIT 156
Query: 201 VEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEI 260
+EV SD V ++ ++Q +P D I+ ++D R+ +++ + T+ +
Sbjct: 157 LEVEPSDTVENVKGKIQDKE-----GIPPDQQRLIFAGKQLEDSRTLSDYNIQKESTLHL 211
>gi|145498050|ref|XP_001435013.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402142|emb|CAK67616.1| unnamed protein product [Paramecium tetraurelia]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + ++ LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKNITLDVEPSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 AVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|4589760|dbj|BAA76889.1| ubiquitin [Trichophyton mentagrophytes]
gi|6539532|dbj|BAA88168.1| ubiquitin [Arthroderma otae]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|403221030|dbj|BAM39163.1| ubiquitin [Theileria orientalis strain Shintoku]
Length = 155
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|357498825|ref|XP_003619701.1| Ubiquitin-like protein [Medicago truncatula]
gi|355494716|gb|AES75919.1| Ubiquitin-like protein [Medicago truncatula]
Length = 290
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 43/210 (20%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKI-------------------------- 94
I + S + L++ Q+ ++ K I L++
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVERGYPPDQQRLIFAGKQLEDGRTLAD 195
Query: 95 -NIPSNSKTHH---------------HHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLL 138
NI S H + L+++ +DT+ +K KI + E IP ++
Sbjct: 196 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 255
Query: 139 VQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ +G +L+D R+L D + + + + +R
Sbjct: 256 LIFAGKQLEDGRTLADYNIQKESTLHLVLR 285
>gi|356525758|ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
gi|356556999|ref|XP_003546806.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
gi|255627501|gb|ACU14095.1| unknown [Glycine max]
Length = 154
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ ++
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKE 134
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
G +K+ LT K I +++ +D + +++ +++ +P
Sbjct: 73 LR-----------GGTMIKVKTLT---GKEIEIDIEPTDTIDRIKERVEEKE-----GIP 113
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
IY + DD++ + +++ G +
Sbjct: 114 PVQQRLIYAGKQLADDKTAKEYNIEGGSVL 143
>gi|163575|gb|AAA30720.1| polyubiquitin, partial [Bos taurus]
Length = 164
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 71
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 72 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 111
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 112 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 159
>gi|61889379|emb|CAI51312.2| polyubiquitin [Capsicum chinense]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRFRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|302393789|sp|P62972.2|UBIQP_XENLA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|2118960|pir||I51568 polyubiquitin - African clawed frog (fragment)
gi|214864|gb|AAA49978.1| polyubiquitin, partial [Xenopus laevis]
Length = 167
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 16 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 75
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 76 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 115
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 116 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 163
>gi|334186377|ref|NP_001190681.1| ubiquitin 11 [Arabidopsis thaliana]
gi|357512383|ref|XP_003626480.1| Ubiquitin-like protein [Medicago truncatula]
gi|40287484|gb|AAR83856.1| hexameric polyubiquitin 6PU11 [Capsicum annuum]
gi|147802377|emb|CAN77120.1| hypothetical protein VITISV_031666 [Vitis vinifera]
gi|217074820|gb|ACJ85770.1| unknown [Medicago truncatula]
gi|332657071|gb|AEE82471.1| ubiquitin 11 [Arabidopsis thaliana]
gi|355501495|gb|AES82698.1| Ubiquitin-like protein [Medicago truncatula]
gi|388491722|gb|AFK33927.1| unknown [Medicago truncatula]
gi|388492650|gb|AFK34391.1| unknown [Lotus japonicus]
gi|399513944|gb|AFP43342.1| polyubiquitin [Arabidopsis thaliana]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|71534894|gb|AAZ32851.1| pentameric polyubiquitin [Medicago sativa]
Length = 189
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 23 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 82
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 83 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 122
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 123 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 170
>gi|326931517|ref|XP_003211875.1| PREDICTED: polyubiquitin-B-like isoform 1 [Meleagris gallopavo]
gi|326931519|ref|XP_003211876.1| PREDICTED: polyubiquitin-B-like isoform 2 [Meleagris gallopavo]
gi|149052896|gb|EDM04713.1| rCG34296, isoform CRA_a [Rattus norvegicus]
gi|149052897|gb|EDM04714.1| rCG34296, isoform CRA_a [Rattus norvegicus]
gi|344245202|gb|EGW01306.1| Ubiquitin [Cricetulus griseus]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|14250448|gb|AAH08661.1| Ubc protein [Mus musculus]
Length = 202
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|429327043|gb|AFZ78850.1| polyubiquitin [Coptotermes formosanus]
Length = 230
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + ++K KI+ +GIP +Q L+F G+ L+D ++
Sbjct: 1 MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + H+ L+++ D +
Sbjct: 61 IQKDSTLHLVLRLRGGMQIFVKTLT--------------------GKHITLEVEPTDRIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D +L+D + ++ + + +R G
Sbjct: 101 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +D + +++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D + + + + + T+
Sbjct: 202 LEDGNTLQDYSIQKDSTL 219
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + ++K KI+ +GIP +Q L+F G+ L+D ++
Sbjct: 77 MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + H+ L+++ D +
Sbjct: 137 IQKDSTLHLVLRLRGGMQIFVKTLTGK--------------------HITLEVEPTDRIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D +L+D + ++ + + +R
Sbjct: 177 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 224
>gi|357016993|gb|AET50525.1| hypothetical protein [Eimeria tenella]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|324532777|gb|ADY49258.1| Polyubiquitin, partial [Ascaris suum]
Length = 187
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT L L+++ +D V
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------LTLEVEPSDAVQ 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 HVKAKIQDKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLHLVLR 148
>gi|357494497|ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula]
gi|355518872|gb|AET00496.1| Bi-ubiquitin [Medicago truncatula]
gi|388497058|gb|AFK36595.1| unknown [Medicago truncatula]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G +L D ++ ++
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKE 134
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|225733991|pdb|2ZVN|A Chain A, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
Space Group
gi|225733992|pdb|2ZVN|G Chain G, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
Space Group
gi|225733995|pdb|2ZVN|C Chain C, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
Space Group
gi|225733996|pdb|2ZVN|E Chain E, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
Space Group
gi|225733999|pdb|2ZVO|A Chain A, Nemo Cozi Domain In Complex With Diubiquitin In C2 Space
Group
gi|225734000|pdb|2ZVO|G Chain G, Nemo Cozi Domain In Complex With Diubiquitin In C2 Space
Group
gi|374074071|pdb|3AXC|A Chain A, Crystal Structure Of Linear Diubiquitin
Length = 154
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 3 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 62
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 63 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 102
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 103 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 150
>gi|149391359|gb|ABR25697.1| polyubiquitin containing 7 ubiquitin monomers [Oryza sativa Indica
Group]
Length = 201
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 49 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 108
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 109 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 148
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 149 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 196
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 105/230 (45%), Gaps = 39/230 (16%)
Query: 29 KIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSK 88
KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLXDYNIQKESTLHLVLRLRGGMQIFVKTLT--- 57
Query: 89 KIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQD 148
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D
Sbjct: 58 -----------GKT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 100
Query: 149 HRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDN 208
R+L D + + + + +R GM ++ V T G K I +EV +SD
Sbjct: 101 GRTLADYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDT 146
Query: 209 VSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
+ ++ ++Q +P D I+ ++D R+ +++ + T+
Sbjct: 147 IDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 191
>gi|28189839|dbj|BAC56534.1| similar to polyubiquitin [Bos taurus]
Length = 157
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 64
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 65 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 104
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 105 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 152
>gi|123445177|ref|XP_001311351.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121893157|gb|EAX98421.1| polyubiquitin, putative [Trichomonas vaginalis G3]
Length = 229
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + ++K KI+ +GIP +Q L+F G+ L+D ++
Sbjct: 1 MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + H+ L+++ D +
Sbjct: 61 IQKDSTLHLVLRLRGGMQIFVKTLT--------------------GKHITLEVEPTDRIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D +L+D + ++ + + +R G
Sbjct: 101 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +D + +++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KHITLEVEPTDRIEDVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D + + + + + T+
Sbjct: 202 LEDGNTLQDYSIQKDSTL 219
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + ++K KI+ +GIP +Q L+F G+ L+D ++
Sbjct: 77 MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + H+ L+++ D +
Sbjct: 137 IQKDSTLHLVLRLRGGMQIFVKTLTGK--------------------HITLEVEPTDRIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D +L+D + ++ + + +R
Sbjct: 177 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 224
>gi|414865716|tpg|DAA44273.1| TPA: Ubiquitin fusion protein [Zea mays]
Length = 205
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|7799051|emb|CAB90826.1| ubiquitin [Cyanidium caldarium]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|413926514|gb|AFW66446.1| ubiquitin2 [Zea mays]
gi|413935669|gb|AFW70220.1| polyubiquitin-like protein [Zea mays]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|164661299|ref|XP_001731772.1| hypothetical protein MGL_1040 [Malassezia globosa CBS 7966]
gi|159105673|gb|EDP44558.1| hypothetical protein MGL_1040 [Malassezia globosa CBS 7966]
Length = 154
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|168036269|ref|XP_001770630.1| predicted protein [Physcomitrella patens subsp. patens]
gi|81230136|dbj|BAE48267.1| putative polyubiquitin [Physcomitrella patens]
gi|81230138|dbj|BAE48268.1| putative polyubiquitin [Physcomitrella patens]
gi|162678151|gb|EDQ64613.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ DT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPYDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G ++ D ++ +D
Sbjct: 101 RIKERVEEKEGIPPVQQRLIFAGKQMNDDKTAKD 134
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ +DT+ IKE++E+ +GIP +Q L+F G+ + DD+ + I S + L
Sbjct: 86 GKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLIFAGKQMNDDKTAKDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|353230196|emb|CCD76367.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Length = 247
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPS 170
+K KI + E IP ++ + +G +L+D R+L D + + + V S
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDLHIQERVHSSLGVASS 150
>gi|350537349|ref|NP_001232755.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
gi|326929576|ref|XP_003210936.1| PREDICTED: polyubiquitin-like [Meleagris gallopavo]
gi|197129060|gb|ACH45558.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
gi|225708456|gb|ACO10074.1| Ubiquitin [Osmerus mordax]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|428672795|gb|EKX73708.1| ubiquitin family member protein [Babesia equi]
Length = 155
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|361130305|pdb|3B08|A Chain A, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130307|pdb|3B08|D Chain D, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130309|pdb|3B08|G Chain G, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130311|pdb|3B08|J Chain J, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130437|pdb|3B0A|A Chain A, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130439|pdb|3B0A|D Chain D, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
Length = 152
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|397614491|gb|EJK62831.1| hypothetical protein THAOC_16543 [Thalassiosira oceanica]
Length = 240
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 97 GKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 156
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + LD++ +DT+ +K KI +
Sbjct: 157 VLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIDNVKTKIQDK 196
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 197 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 235
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 164 MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 223
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 224 IQKESTLHLVL 234
>gi|62079638|gb|AAX61165.1| ubiquitin [Oreochromis mossambicus]
Length = 160
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 29/181 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E+ P ++ + +G +L+D R+L D + + P+ S S G
Sbjct: 101 NVKAKIQDKEAFPPDQQRLIFAGKQLEDGRTLSDYNIQ---------KSPPSTLSCVSGG 151
Query: 181 M 181
M
Sbjct: 152 M 152
>gi|384371341|gb|ABF06579.2| polyubiquitin, partial [Gladiolus grandiflorus]
Length = 162
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|209875527|ref|XP_002139206.1| ubiquitin family protein [Cryptosporidium muris RN66]
gi|209554812|gb|EEA04857.1| ubiquitin family protein [Cryptosporidium muris RN66]
Length = 155
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|84998672|ref|XP_954057.1| ubiquitin [Theileria annulata]
gi|65305055|emb|CAI73380.1| ubiquitin, putative [Theileria annulata]
Length = 159
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|226484009|emb|CAX79673.1| ubiquitin C [Schistosoma japonicum]
gi|226484011|emb|CAX79674.1| ubiquitin C [Schistosoma japonicum]
gi|226484013|emb|CAX79675.1| ubiquitin C [Schistosoma japonicum]
Length = 153
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|56199552|gb|AAV84265.1| ubiquitin [Culicoides sonorensis]
Length = 167
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|343960965|dbj|BAK62072.1| ubiquitin [Pan troglodytes]
Length = 177
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRALSDYNIQKESTLHLVLR 148
>gi|323451976|gb|EGB07851.1| ubiquitin [Aureococcus anophagefferens]
Length = 153
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDSID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|395836339|ref|XP_003791115.1| PREDICTED: polyubiquitin-B [Otolemur garnettii]
gi|149287178|gb|ABR23488.1| ubiquitin/40S ribosomal protein S27a [Ornithodoros parkeri]
gi|194374819|dbj|BAG62524.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|256079432|ref|XP_002575991.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Length = 153
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|82568440|dbj|BAE48510.1| polyubiquitin [Raphidiophrys contractilis]
Length = 173
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 34/204 (16%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + + L+++ +D++ +K KI +
Sbjct: 63 VLRLRGGMQIFVKTLT--------------------GKTITLEVESSDSIENVKAKIQDK 102
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 103 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIF 149
Query: 190 VLTQCGNKRIPVEVNASDNVSELR 213
V T G K I +EV +SD++ ++
Sbjct: 150 VKTLTG-KTITLEVESSDSIENVK 172
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 70 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 129
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 130 IQKESTLHLVL 140
>gi|159472951|ref|XP_001694608.1| bi-ubiquitin [Chlamydomonas reinhardtii]
gi|158276832|gb|EDP02603.1| bi-ubiquitin [Chlamydomonas reinhardtii]
gi|300720946|gb|ADK33602.1| bi-ubiquitin [Chlamydomonas reinhardtii]
Length = 153
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMMIKVKTLT--------------------GKEIEIDIEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+KE++ E E IP + + +G ++ D + +D
Sbjct: 101 RIKERVEEKEGIPPVQQRLIFAGKQMNDDKQAKD 134
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L+F G+ + DD+ + I S + L
Sbjct: 86 GKEIEIDIEPSDTIERIKERVEEKEGIPPVQQRLIFAGKQMNDDKQAKDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
G +K+ LT K I +++ SD + ++ +++ ++
Sbjct: 73 LR-----------GGMMIKVKTLT---GKEIEIDIEPSDTIERIK---ERVEEKEGIPPV 115
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
Q F KQ M+DD+ + +++ G +
Sbjct: 116 QQRLIFAGKQ--MNDDKQAKDYNIEGGSVL 143
>gi|3954791|emb|CAA26488.1| unnamed protein product [Gallus gallus]
Length = 157
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 64
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 65 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 104
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ +G +L+D R+L D + + + + +R
Sbjct: 105 NVKAKIQDKEGIPPDQQRWIFAGKQLEDGRTLSDYNIQKESTLHLVLR 152
>gi|323453810|gb|EGB09681.1| polyubiquitin, partial [Aureococcus anophagefferens]
Length = 134
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 20/148 (13%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
+ + L+ + KT + LD++ +DT+ +K+KI +
Sbjct: 63 V-------------------LRLRGGMQIFVKT-LTGKTITLDVEPSDTIDNVKQKIQDK 102
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCEL 157
E IP ++ + +G +L+D R+L D +
Sbjct: 103 EGIPPDQQRLIFAGKQLEDGRTLSDYNI 130
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 71/144 (49%), Gaps = 19/144 (13%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ LD++ +DT+ +K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 6 ITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
GM ++ V T G K I ++V SD + +++++Q +P
Sbjct: 66 --------LRGGM-----QIFVKTLTG-KTITLDVEPSDTIDNVKQKIQDKE-----GIP 106
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHV 252
D I+ ++D R+ +++
Sbjct: 107 PDQQRLIFAGKQLEDGRTLSDYNI 130
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 70 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 129
Query: 61 ILQNS 65
I + S
Sbjct: 130 IQKES 134
>gi|223646258|gb|ACN09887.1| Ubiquitin [Salmo salar]
gi|223672105|gb|ACN12234.1| Ubiquitin [Salmo salar]
Length = 191
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 48 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 107
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + + L+++ +DT+ +K KI +
Sbjct: 108 VLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIENVKAKIQDK 147
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 148 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 186
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 115 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 174
Query: 61 ILQNSRIQLLVASDNKP 77
I + S + L++ P
Sbjct: 175 IQKESTLHLVLRLRGGP 191
>gi|340374063|ref|XP_003385558.1| PREDICTED: polyubiquitin-C-like, partial [Amphimedon queenslandica]
Length = 675
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK + V F DTV +IK KIE+ +GIP +Q ++F ++L +D +E E
Sbjct: 176 MTIFAKTLSGKTIKLNVNFSDTVSDIKRKIEEMEGIPCHEQKIIFGQRLLGEDY-IE--E 232
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
L +I+ L+ + K PS+ + + P+ + LD + +DT+
Sbjct: 233 ALSPGKIKTLLDHNVKDGSILHLIFPSRASGVIVKFPAGKI-------IMLDTEPSDTIE 285
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEI 163
+K KI + E IP ++ + + L+D R+L D + + I
Sbjct: 286 NVKAKIKDKEGIPPDQQRLIFAFRRLEDGRTLSDYNIQNKDTI 328
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 2 DVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEI 61
D+ GK EV DTV +K+ I +GI QTL + GQ L D + + +I
Sbjct: 101 DIYIRTFSGKMVVFEVLPTDTVSYLKKMIRDKEGISSNDQTLFYAGQQLDDASTLANYDI 160
Query: 62 LQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLR 121
S +QL+ + P+ I K + KT + L+++ +DTV
Sbjct: 161 PMESMLQLVT-----------RFCPNMTIFAKT---LSGKT------IKLNVNFSDTVSD 200
Query: 122 LKEKIHEMESIP 133
+K KI EME IP
Sbjct: 201 IKRKIEEMEGIP 212
>gi|384495224|gb|EIE85715.1| polyubiquitin [Rhizopus delemar RA 99-880]
Length = 230
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
+K KI + E IP ++ + +G +L+D R+L D
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 137 IQKESTLHLVL 147
>gi|82622379|gb|ABB86777.1| unknown [Theileria lestoquardi]
Length = 159
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDEEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|319996466|dbj|BAJ61942.1| ubiquitin [Nymphaea hybrid cultivar]
Length = 146
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+ + L+ + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLV-------------------LRLRGGMQIFVKT-LTGKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
+K KI + E IP ++ + +G +L+D R+L D
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 134
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNS 65
I + S
Sbjct: 137 IQKES 141
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 19/144 (13%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
GM ++ V T G K I +EV +SD + ++ ++Q +P
Sbjct: 73 --------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIP 113
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHV 252
D I+ ++D R+ +++
Sbjct: 114 PDQQRLIFAGKQLEDGRTLADYNI 137
>gi|428164090|gb|EKX33130.1| ubiquitin [Guillardia theta CCMP2712]
Length = 153
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 MVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|388516797|gb|AFK46460.1| unknown [Medicago truncatula]
Length = 153
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
+K KI + E IP ++ + +G +L+D R+L D
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 134
>gi|2641213|gb|AAB86858.1| polyubiquitin, partial [Schizophyllum commune]
Length = 139
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
+K KI + E IP ++ + +G +L+D R+L D
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 I 61
I
Sbjct: 137 I 137
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 19/144 (13%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
GM ++ V T G K I +EV +SD + ++ ++Q +P
Sbjct: 73 --------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIP 113
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHV 252
D I+ ++D R+ +++
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNI 137
>gi|357116845|ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
L40-like [Brachypodium distachyon]
Length = 213
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L + R + C
Sbjct: 1 MQIFVKTLTGKTITLEVESSDIIDNVKTKIQDKEGIPPEQQRLIFAGKQLDNGRTLADCN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ ++ ++ I + T + L+++ +DT+
Sbjct: 61 IQKESTLHLVL-----------------RLQGRMXIFVKTLT---GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLR 148
>gi|384497521|gb|EIE88012.1| polyubiquitin [Rhizopus delemar RA 99-880]
Length = 231
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
+K KI + E IP ++ + +G +L+D R+L D
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLV-------ASDNKPQVKTE-----QSSPSKKIHLKINIPSNSKTHHHHHH 108
I + S + L++ + K Q + + QS K + + N H
Sbjct: 137 IQKESTLHLVLRLRGGNGLEEQKKQTRKKTRCAFQSCSEKPVKIIGNCRYCQSNFCARHR 196
Query: 109 LPLD 112
LP D
Sbjct: 197 LPED 200
>gi|242074418|ref|XP_002447145.1| hypothetical protein SORBIDRAFT_06g029360 [Sorghum bicolor]
gi|241938328|gb|EES11473.1| hypothetical protein SORBIDRAFT_06g029360 [Sorghum bicolor]
Length = 153
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKSITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
>gi|118793820|ref|XP_321091.3| AGAP001970-PA [Anopheles gambiae str. PEST]
gi|116115995|gb|EAA01176.4| AGAP001970-PA [Anopheles gambiae str. PEST]
Length = 236
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V +TVL+IK KIE+ +GI +Q ++F G+ L D R +
Sbjct: 1 MQIFVKTLTGKTITLDVIASETVLDIKSKIEQREGIAPDQQRIIFAGKQLDDGRIISDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I S + L++ Q+ + KT + +D + TV
Sbjct: 61 IQHGSTMHLVLRLKGGMQIFVRMLT--------------GKT------IAIDTEPEATVE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K++I E E IP N+ + +G +L+D R L++ ++ + I + +R
Sbjct: 101 SVKKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIKASTIHLVLRLK---------- 150
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
G ++ + +LT K I V+ V ++K++ + + +P + I+
Sbjct: 151 -GGMQIFVRMLT---GKTIAVDTEPEATVESVKKQIDEREE-----IPPNQQRMIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R + + + + TI
Sbjct: 202 LEDGRQLQEYSIIKASTI 219
>gi|145495350|ref|XP_001433668.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400787|emb|CAK66271.1| unnamed protein product [Paramecium tetraurelia]
Length = 154
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R ++ I + S + L
Sbjct: 11 GKTITLDVKSEDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYNIQKESTLHL 70
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + S KT + LD++ + T+ +K KI +
Sbjct: 71 VLRLRGGMQIFVKNLS--------------GKT------ITLDVEPDQTIDMIKSKIQDK 110
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
E IP ++ + +G +L+D R+L D + + I + +R
Sbjct: 111 EGIPPDQQRLIFAGKQLEDGRTLGDYNIQKESTIHLVLR 149
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V T+ IK KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 78 MQIFVKNLSGKTITLDVEPDQTIDMIKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYN 137
Query: 61 ILQNSRIQLLV 71
I + S I L++
Sbjct: 138 IQKESTIHLVL 148
>gi|37542506|gb|AAL25813.1| polyubiquitin, partial [Prunus avium]
Length = 154
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 2 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 61
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 62 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 101
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E P ++ + +G +L+D R+L D + + + + + +R
Sbjct: 102 NVKAKIQDKEGTPPDQQRLIFAGKQLEDGRTLADYNIQEESTLHLVLR 149
>gi|254802948|gb|ACT82769.1| polyubiquitin [Nicotiana tabacum]
Length = 188
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
+ + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 23 LQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 82
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 83 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 122
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 123 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 170
>gi|346466265|gb|AEO32977.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 25 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 84
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ +K + + + +D++ DT+ R+KE++ E
Sbjct: 85 VLRLRGGTMIKVKTLT--------------------GKEIEIDIEPTDTIDRIKERVEEK 124
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRD 154
E IP + + +G +L D ++ ++
Sbjct: 125 EGIPPVQQRLIYAGKQLADDKTAKE 149
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 101 GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEGGSVLHL 160
Query: 70 LVA 72
++A
Sbjct: 161 VLA 163
>gi|213402873|ref|XP_002172209.1| UV excision repair protein RAD23 [Schizosaccharomyces japonicus
yFS275]
gi|212000256|gb|EEB05916.1| UV excision repair protein RAD23 [Schizosaccharomyces japonicus
yFS275]
Length = 373
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 22 TVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKT 81
TVLE+K+KI++ QG V +Q L+++G++L DD+ VE +I + I +V+ +VKT
Sbjct: 23 TVLEVKQKIKEQQGYEVERQKLIYSGRILADDKTVEEYDIKEKDFIVCMVSRAPASKVKT 82
Query: 82 EQSSPSKKIHLKINIPSNSKTHHHHHHLP 110
EQ + KK + P N+ + P
Sbjct: 83 EQKTEEKKQSTTESTPLNTTSTSPKTPAP 111
>gi|392569339|gb|EIW62512.1| ubiquitin-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 769
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 124 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 183
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 184 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 223
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
K KI + E IP ++ + +G +L+D R+L D
Sbjct: 224 NSKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 257
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 51/273 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVP-------KQTLVFNGQVLQDD 53
M + GK T+EV DT+ +K KI+ +G +P +Q L+F G+ L+D
Sbjct: 46 MQTYLKTLTGKTITLEVESSDTIDNVKAKIQDKEGTDIPSASLPPDQQRLIFAGKQLEDG 105
Query: 54 RDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDM 113
R + I + S + L +I +K KT + L++
Sbjct: 106 RTLSDYSIQKESTLHL----------------GGMQIFVKT---LTGKT------ITLEV 140
Query: 114 DVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTA 173
+ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 141 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR----- 195
Query: 174 TSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYF 233
GM ++ V T G K I +EV +SD + + ++Q +P D
Sbjct: 196 ---LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNSKAKIQDKE-----GIPPDQQR 241
Query: 234 FIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVT 266
I+ ++D R+ +++ + T+ + T
Sbjct: 242 LIFAGKQLEDGRTLSDYNIQKESTLHLVWSDAT 274
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 22/140 (15%)
Query: 15 IEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASD 74
+EV DT+ ++KEK + +G+ Q L+F G++LQD + C I + S + L++
Sbjct: 544 LEVKSSDTIKDVKEKYQDKEGVAPAHQRLIFAGKLLQDGCVLSDCGIQKESTLHLVI--- 600
Query: 75 NKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPV 134
P +I +K + + +DT+ R++EKI ++E I
Sbjct: 601 ---------RLPGMQIFVK---------SFTGKTITIKAKPSDTIGRVREKIRDVEGISP 642
Query: 135 NRLLVQSSGAELQDHRSLRD 154
+ +L + +G EL+D R L D
Sbjct: 643 DSIL-KFAGKELEDGRLLSD 661
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 45/233 (19%)
Query: 7 PQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSR 66
P GK +E DT+ +K I +G+ +Q L+F G+ L R V + + S
Sbjct: 387 PTVGKTIALEADSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSRRTVSDYNMRKGST 446
Query: 67 IQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKI 126
+ L+ + Q+ + S K I L++ PL DT+ +K KI
Sbjct: 447 VFLIFRVLDGMQISVKTLS-GKTITLEVK--------------PL-----DTIGSIKTKI 486
Query: 127 HEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKL 186
E P ++ V+ + EL++ R+L D + N+ + + R
Sbjct: 487 QAKEGTPPDQQCVKFADDELEEDRTLLDYNIQWNSTLQLVGR-----------------F 529
Query: 187 KLLVLTQCGNKRIPVEVNASDNVSELRKELQK------LHQRYHF--HLPQDG 231
++ V + P+EV +SD + +++++ Q HQR F L QDG
Sbjct: 530 QIFVKRALTRETTPLEVKSSDTIKDVKEKYQDKEGVAPAHQRLIFAGKLLQDG 582
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ IK KI+ +G P +Q + F L++DR +
Sbjct: 457 MQISVKTLSGKTITLEVKPLDTIGSIKTKIQAKEGTPPDQQCVKFADDELEEDRTLLDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I NS +QL+ +I + K PL++ +DT+
Sbjct: 517 IQWNSTLQLVG-------------------RFQIFV----KRALTRETTPLEVKSSDTIK 553
Query: 121 RLKEKIHEMESI-PVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSS 179
+KEK + E + P ++ L+ +G LQD L DC + + + + +R
Sbjct: 554 DVKEKYQDKEGVAPAHQRLI-FAGKLLQDGCVLSDCGIQKESTLHLVIR---------LP 603
Query: 180 GMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
GM ++ V + G K I ++ SD + +R++++
Sbjct: 604 GM-----QIFVKSFTG-KTITIKAKPSDTIGRVREKIR 635
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%)
Query: 3 VIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEIL 62
+ RGK T+E FDTV +K KI +G P Q L+F G+ L D R + I
Sbjct: 678 IFVRSMRGKTVTLEAEPFDTVENVKAKIHDKEGCPPDLQRLIFAGKQLVDGRTLSDYSIP 737
Query: 63 QNSRIQLLVAS 73
NS + L+ S
Sbjct: 738 NNSTLHLVYRS 748
>gi|1321735|emb|CAA64326.1| ubiquitin [Carabus alpestris]
Length = 139
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
+K KI + E IP ++ + +G +L+D R+L D
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 I 61
I
Sbjct: 137 I 137
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 19/144 (13%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
GM ++ V T G K I +EV SD + ++ ++Q +P
Sbjct: 73 --------LRGGM-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIP 113
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHV 252
D I+ ++D R+ +++
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNI 137
>gi|228311825|pdb|2W9N|A Chain A, Crystal Structure Of Linear Di-Ubiquitin
Length = 152
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 10 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 70 VLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIENVKAKIQDK 109
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 110 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 137 IQKESTLHLVL 147
>gi|290980934|ref|XP_002673186.1| polyubiquitin [Naegleria gruberi]
gi|284086768|gb|EFC40442.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 24/170 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + G T+EV D++ +K K++ +GI +Q L+F G+ L+D R +
Sbjct: 1 MQLFVKTLTGITITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYN 60
Query: 61 ILQNSRIQLLVASDNKPQ--VKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDT 118
I ++S + L++ Q VKT KT + ++M+ NDT
Sbjct: 61 IQKDSTLHLVLRLRGGMQLFVKT----------------LTGKT------ITIEMESNDT 98
Query: 119 VLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
V +K+KI + E IP ++ + +G +L+D R++ D L ++ + + +R
Sbjct: 99 VENMKQKIFDKEGIPSDQQRLIYAGKQLEDGRTIGDYNLQKDSTVHLVLR 148
>gi|26353460|dbj|BAC40360.1| unnamed protein product [Mus musculus]
Length = 153
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q ++F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLDLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|24640094|ref|NP_572306.1| CG11700 [Drosophila melanogaster]
gi|7290696|gb|AAF46143.1| CG11700 [Drosophila melanogaster]
Length = 301
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K +I +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIK 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K +IH+ + IP + + +G +L+D R+L D + + + H +
Sbjct: 253 HVKARIHDKDGIPPDHQRLIFAGKQLEDGRTLSDYNIQKESTLHSHFK 300
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 119/277 (42%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ + P Q L+F G+ L++ R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S I L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTIYLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E P + G L++ R+L D + + I + +R G
Sbjct: 101 NVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD++ ++ ++H + +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDSIENVKA---RIHDKE--GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
>gi|2209091|gb|AAB61405.1| ubiquitin [Tetrahymena vorax]
Length = 153
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGITLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|75858833|gb|ABA28993.1| polyubiquitin [Symbiodinium sp. C3]
Length = 176
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 34/209 (16%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DSIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNV 209
M ++ V T G K I +EV SD++
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDSI 175
>gi|224159432|ref|XP_002338082.1| predicted protein [Populus trichocarpa]
gi|222870685|gb|EEF07816.1| predicted protein [Populus trichocarpa]
Length = 118
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +K + + + +D++ NDT+
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLT--------------------GKEIEIDIEPNDTID 100
Query: 121 RLKEKIHEMESIP 133
R+KE++ E E IP
Sbjct: 101 RIKERVEEKEGIP 113
>gi|324515150|gb|ADY46106.1| Polyubiquitin-A [Ascaris suum]
Length = 267
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L++ G+ LQD R
Sbjct: 1 MQIFVKTISGKTITLEVEPSDTIENVKTKIQDKEGIPPIEQRLIYAGRHLQDCRTASDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + LL+ Q+ + + KT + L+++ +DT+
Sbjct: 61 IEKASTLHLLLRLPCGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E I ++ + +G +L DH+ + D + + + + + R G
Sbjct: 101 NVKAKIQDKEGIRPDQQRLIFAGKQLDDHQKIGDYNIRNGSIVHLVFR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M L+ + + +EV SD V ++ K++ + +P D IY
Sbjct: 153 M------LIFIKTLTGVTMTLEVELSDKVQHVKA---KIYDKE--GIPPDQQRLIYAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++DDR+ +++ + T+
Sbjct: 202 LEDDRTLSDYNIQKESTV 219
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 35/226 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GI +Q L+F G+ L D + +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIRPDQQRLIFAGKQLDDHQKIGDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I S + L+ + + I I + + + L+++++D V
Sbjct: 137 IRNGSIVHLVF---------------RLRGGMLIFIKTLTGVT-----MTLEVELSDKVQ 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI++ E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 HVKAKIYDKEGIPPDQQRLIYAGKQLEDDRTLSDYNIQKESTVHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFH 226
M + + T G+ + ++V+ASD+V ++ + Q + Q +FH
Sbjct: 229 M-----DISINTLVGDA-MTLQVDASDSVENIKADGQ-VEQAPYFH 267
>gi|449483218|ref|XP_004156525.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
sativus]
Length = 208
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 87/169 (51%), Gaps = 18/169 (10%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPS-NSKTHHHHHHLPLDMDVNDTV 119
I + S + L++ +++ P ++I + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVL------RLRGGIIEP-----MQIFVKTLTGKT------ITLEVESSDTI 103
Query: 120 LRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 104 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 152
>gi|170034791|ref|XP_001845256.1| ubiquitin [Culex quinquefasciatus]
gi|167876386|gb|EDS39769.1| ubiquitin [Culex quinquefasciatus]
Length = 154
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ IK KIE +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
+ + S + L++ Q+ + + +D++ DTV
Sbjct: 61 VQKGSTLHLVLRLRGGFQIFVKMLT--------------------GRCFTVDIEQEDTVD 100
Query: 121 RLKEKIHE-MESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
LK+++ E +E +P N+ + +G +L+D R++ + ++ + + + +R
Sbjct: 101 TLKQRVSERLEEMPANQCRLIFAGKQLEDGRTVGEYSVIKGSTLHLVLR 149
>gi|167519655|ref|XP_001744167.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777253|gb|EDQ90870.1| predicted protein [Monosiga brevicollis MX1]
Length = 153
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + S KT + L+++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLS--------------GKT------ITLEVEPSDSIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|164510220|emb|CAJ41450.1| ubiquitin [Alvinella caudata]
Length = 152
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 82/169 (48%), Gaps = 22/169 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPS-NSKTHHHHHHLPLDMDVNDTV 119
I + S + L+ P + ++I + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLV---------------PRLRGGMQIFVKTLTGKT------ITLEVEASDNI 99
Query: 120 LRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 100 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYNIQKESTLHLVLR 148
>gi|301617753|ref|XP_002938291.1| PREDICTED: ubiquitin-like [Xenopus (Silurana) tropicalis]
Length = 153
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCRSLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLR 148
>gi|148905774|gb|ABR16051.1| unknown [Picea sitchensis]
gi|148906367|gb|ABR16338.1| unknown [Picea sitchensis]
gi|148906448|gb|ABR16377.1| unknown [Picea sitchensis]
Length = 153
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ IK KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTIDNIKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+ + L+ I KT + +D++ +DT+
Sbjct: 61 IQKESTLHLV-------------------LRLRGGISIKVKT-LTGKEVEIDIEPHDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
R+K+++ E E IP + + G ++ D ++ R+
Sbjct: 101 RIKQRVEEKEGIPPIQQRLIYGGKQMNDDKTARE 134
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ LD++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 13 ITLDVESSDTIDNIKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
G +K+ LT K + +++ D + +++ +++ +P
Sbjct: 73 LR-----------GGISIKVKTLT---GKEVEIDIEPHDTIERIKQRVEEKE-----GIP 113
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
IY M+DD++ R +++ G +
Sbjct: 114 PIQQRLIYGGKQMNDDKTAREYNIEGGSVL 143
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IK+++E+ +GIP +Q L++ G+ + DD+ I S + L
Sbjct: 86 GKEVEIDIEPHDTIERIKQRVEEKEGIPPIQQRLIYGGKQMNDDKTAREYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|283245864|gb|ABH10622.2| ubiquitin [Nicotiana tabacum]
Length = 143
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 20/145 (13%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 9 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 68
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 69 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDK 108
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRD 154
E IP ++ + +G +L+D R+L D
Sbjct: 109 EGIPPDQQRLIFAGKQLEDGRTLAD 133
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 76 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 135
Query: 61 ILQNSRI 67
I + S +
Sbjct: 136 IQKESTL 142
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 12 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 71
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
GM ++ V T G K I +EV +SD + ++ ++Q +P
Sbjct: 72 --------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIP 112
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
D I+ ++D R+ +++ + T+
Sbjct: 113 PDQQRLIFAGKQLEDGRTLADYNIQKESTL 142
>gi|261289543|ref|XP_002604748.1| hypothetical protein BRAFLDRAFT_122556 [Branchiostoma floridae]
gi|229290076|gb|EEN60758.1| hypothetical protein BRAFLDRAFT_122556 [Branchiostoma floridae]
Length = 363
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MD+ E G AF + V F+TV+ +K KI++ +GIP+ +Q L++ L+DD +
Sbjct: 1 MDLFIETLTGTAFELRVSPFETVISVKAKIQRLEGIPISQQHLIWRSVELEDDYCLHDYS 60
Query: 61 ILQNSRIQLLVASDNKP----QVKTEQSSPSK 88
I S ++L++A P +V +Q++ S+
Sbjct: 61 ITDGSTLKLVLAMRGGPINTRRVNADQAAESR 92
>gi|90075190|dbj|BAE87275.1| unnamed protein product [Macaca fascicularis]
Length = 157
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDIIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|239788927|dbj|BAH71116.1| ACYPI006410 [Acyrthosiphon pisum]
Length = 154
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|1805696|emb|CAA71664.1| polyubiquitin [Ceratitis capitata]
Length = 134
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 20/145 (13%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 3 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 62
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + + L+++ +DT+ +K KI +
Sbjct: 63 VLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIENVKAKIQDK 102
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRD 154
E IP ++ + +G +L+D R+L D
Sbjct: 103 EGIPPDQQRLIFAGKQLEDGRTLSD 127
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 70 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 129
Query: 61 ILQNS 65
I + S
Sbjct: 130 IQKES 134
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 19/144 (13%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 6 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 65
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
GM ++ V T G K I +EV SD + ++ ++Q +P
Sbjct: 66 --------LRGGM-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIP 106
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHV 252
D I+ ++D R+ +++
Sbjct: 107 PDQQRLIFAGKQLEDGRTLSDYNI 130
>gi|358060688|dbj|GAA93627.1| hypothetical protein E5Q_00271 [Mixia osmundae IAM 14324]
Length = 1022
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 259 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 318
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++ L++ Q+ + + KT + L+++ +DT+
Sbjct: 319 IRRSLPSTLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 358
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 359 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 406
>gi|239799385|dbj|BAH70616.1| ACYPI007765 [Acyrthosiphon pisum]
Length = 153
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDSIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|443697127|gb|ELT97674.1| hypothetical protein CAPTEDRAFT_147724 [Capitella teleta]
Length = 180
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 21/145 (14%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK TI+V +T+ +KEKI G PV +Q +++ G++L++D V+ +I + IQ+
Sbjct: 19 GKTITIDVEGSETIESVKEKINAKDGTPVERQRVIYAGKLLRNDLTVDDFDIKRECNIQM 78
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
L+ S S ++ +K KT + +D+D ++T+ +KEKI+
Sbjct: 79 LIFSQ------------SFQVFVK---TCTGKT------ITIDVDRSETIESVKEKINAK 117
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRD 154
+ PV R ++ +G L++ ++ D
Sbjct: 118 DGTPVQRQKLRYAGKFLRNDLTVDD 142
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK TI+V +T+ +KEKI G PV +Q L + G+ L++D V+ +I + IQ+
Sbjct: 94 GKTITIDVDRSETIESVKEKINAKDGTPVQRQKLRYAGKFLRNDLTVDDFDIKRECTIQM 153
Query: 70 L 70
L
Sbjct: 154 L 154
>gi|297833748|ref|XP_002884756.1| hypothetical protein ARALYDRAFT_478302 [Arabidopsis lyrata subsp.
lyrata]
gi|297330596|gb|EFH61015.1| hypothetical protein ARALYDRAFT_478302 [Arabidopsis lyrata subsp.
lyrata]
Length = 598
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 120/279 (43%), Gaps = 41/279 (14%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D +
Sbjct: 55 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGHTLADYS 114
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ I P + T L L+++ +DT+
Sbjct: 115 IQKESTLHLVLRLRGGMQI------------FVITFPGKNFT---GETLTLEVESSDTID 159
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAEL--QDHRSLRDCELMDNAEIDVHVRPSPTATSTTS 178
+K KI + E + + + G EL +D R+L D + + + + + R
Sbjct: 160 SVKAKIQDREGLRPDHQRLSFHGEELFTKDGRTLADYGIQNKSALHLGTRL--------- 210
Query: 179 SGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQ 238
G +K L + +EV +SD + ++ ++Q+ +P D + I+
Sbjct: 211 RGNMYIFVKNLPYNTFTGENFILEVESSDTIDNVKAKIQEKE-----GIPMDLHRLIFAG 265
Query: 239 NVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++ R+ +++ +G T+ +IF ++TG
Sbjct: 266 KPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTG 304
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K T+EV DT+ +K KI+ GIP+ +Q+L+F G+VL R + I + S I L
Sbjct: 460 KTITLEVESSDTIDNVKVKIQHKVGIPLDRQSLIFGGRVLVGTRTLLDYNIQKESTIHQL 519
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
Q+ ++ K I L++ NS DT+ +KEKI E
Sbjct: 520 FLQRGGMQIFI-KTLTGKTIMLEVE---NS----------------DTIANVKEKIQVKE 559
Query: 131 SI-PVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
I PV + L+ G +L+D +L D + N+ + + +R
Sbjct: 560 GITPVQQRLI-FFGKQLEDGVTLGDYCIHKNSTLYLVLR 597
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 47/254 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
G+ F +EV DT+ +K KI++ +GIP+ L+F G+ L+ R + H I + S + L
Sbjct: 228 GENFILEVESSDTIDNVKAKIQEKEGIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYL 287
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
+ Q+ ++ K+I+L++ + DT+ +K I +
Sbjct: 288 VTRFRCGMQIFV-KTLTGKRINLEV-------------------ESWDTIENVKAMIQDK 327
Query: 130 ESIP--VNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLK 187
E I + RL+ G EL+D + D + + + + + GM
Sbjct: 328 EGIQPDLQRLIFL--GKELKDRCTPADYGIQKESTLHLVL------------GMQ----- 368
Query: 188 LLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSF 247
+ + G K I +EV +SD + ++ ++Q P D I+ + ++D R+
Sbjct: 369 -IFVKLFGGKIITLEVVSSDTIESVKAKIQD-----KVGSPPDQQRLIFLGHELEDGRTL 422
Query: 248 RWHHVGQGDTIEIF 261
+ + T+ +F
Sbjct: 423 ADYDIRNESTLRLF 436
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +KEKI+ +GI +Q L+F G+ L+D +
Sbjct: 526 MQIFIKTLTGKTIMLEVENSDTIANVKEKIQVKEGITPVQQRLIFFGKQLEDGVTLGDYC 585
Query: 61 ILQNSRIQLLV 71
I +NS + L++
Sbjct: 586 IHKNSTLYLVL 596
>gi|92790162|emb|CAI83750.1| Polyubiqutin 4 [Isotricha prostoma]
Length = 143
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 20/158 (12%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R + I + S + L+
Sbjct: 1 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLV 60
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
+ Q+ + + KT + LD++ +DT+ +K KI + E
Sbjct: 61 LRLRGGMQIFVKTLT--------------GKT------ITLDVEPSDTIENVKAKIQDKE 100
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
IP ++ + +G +L+D+R+L D + + + + +R
Sbjct: 101 GIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLR 138
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D+R +
Sbjct: 67 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 126
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 127 IQKESTLHLVL 137
>gi|145503723|ref|XP_001437835.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404993|emb|CAK70438.1| unnamed protein product [Paramecium tetraurelia]
Length = 271
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 103/225 (45%), Gaps = 30/225 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ D+V
Sbjct: 61 IQKESTLHLVLRLRGGMQIFIKTLTG--------------------RLINLDVESTDSVE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
LK++I + E IP N+ + SG +L+D ++L + + + + I + +R
Sbjct: 101 SLKKQIQDKEGIPPNQQRLIFSGHQLEDEKTLLEYNVENESTIHLVLRLMVRCRFM---- 156
Query: 181 MGPRKLKLLVLTQCGNK-RIPVEVNASDNVSELRKELQKLHQRYH 224
LKLL + + ++ + N S+N ++R E +++ Y+
Sbjct: 157 -----LKLLPVKHSQQQWKMYIRQNMSNNQYQIRTEYLLINKDYY 196
>gi|413943514|gb|AFW76163.1| hypothetical protein ZEAMMB73_716174 [Zea mays]
Length = 153
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GI Q L+F G+ L+D + + I + S + L
Sbjct: 10 GKTITVEVESSDTIDNVKAKIQDKEGILPDHQRLIFAGKQLEDGKTLADYNIQKESTLPL 69
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ +K + + + +D++ NDT+ R+KE++ E
Sbjct: 70 VLRLKGGTMIKVKTLT--------------------GKEIEIDIEPNDTIYRIKERVEEK 109
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRD 154
E IP + + +G +L D ++ +D
Sbjct: 110 EGIPPIQQRLIYAGKQLADDKTAKD 134
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK I++ DT+ IKE++E+ +GIP +Q L++ G+ L DD+ + I S + L
Sbjct: 86 GKEIEIDIEPNDTIYRIKERVEEKEGIPPIQQRLIYAGKQLADDKTAKDYNIEGGSVLHL 145
Query: 70 LVA 72
++A
Sbjct: 146 VLA 148
>gi|110289503|gb|AAP54856.2| Nedd8-like protein RUB3 precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|125532818|gb|EAY79383.1| hypothetical protein OsI_34511 [Oryza sativa Indica Group]
gi|125575566|gb|EAZ16850.1| hypothetical protein OsJ_32324 [Oryza sativa Japonica Group]
Length = 81
Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK + + +TV IKE++E +GIP P+QTL++ G+ L DD E C++ S + L
Sbjct: 13 GKEVEVSIEATETVARIKEQVEAAEGIPPPQQTLIYGGRQLADDMTAEMCDLRHGSELHL 72
Query: 70 LVA 72
++A
Sbjct: 73 VLA 75
>gi|339232992|ref|XP_003381613.1| ubiquitin family protein [Trichinella spiralis]
gi|316979552|gb|EFV62333.1| ubiquitin family protein [Trichinella spiralis]
Length = 193
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEID--VHVRPSPTATSTTS 178
+K KI + E IP ++ + +G +L+D R L + + + + + +R ++TT
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSNYNIQKESTLHLVLRLRGGMQISATTL 160
Query: 179 SGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
+G K I VEV SD +R
Sbjct: 161 TG----------------KHITVEVEPSDTPESVR 179
>gi|54300702|gb|AAV33127.1| ubiquitin C splice variant [Homo sapiens]
Length = 153
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L + + + + +R
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSGYNIQKESTLHLVLR 148
>gi|124784704|gb|ABN14989.1| polyubiquitin [Taenia asiatica]
Length = 200
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 43 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 102
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D++
Sbjct: 103 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDSIE 142
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 143 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 190
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 100/223 (44%), Gaps = 39/223 (17%)
Query: 36 IPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKIN 95
IP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT---------- 51
Query: 96 IPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDC 155
KT + L+++ +D++ +K KI + E IP ++ + +G +L+D R+L D
Sbjct: 52 ----GKT------ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 101
Query: 156 ELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
+ + + + +R GM ++ V T G K I +EV SD++ ++ +
Sbjct: 102 NIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVEPSDSIENVKAK 147
Query: 216 LQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI 258
+Q +P D I+ ++D R+ +++ + T+
Sbjct: 148 IQDKE-----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 185
>gi|301094179|ref|XP_002997933.1| ubiquitin, putative [Phytophthora infestans T30-4]
gi|262109719|gb|EEY67771.1| ubiquitin, putative [Phytophthora infestans T30-4]
Length = 175
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V D++ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + LD++ +D++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLDVEPSDSID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
>gi|224052490|ref|XP_002198304.1| PREDICTED: AN1-type zinc finger protein 4 [Taeniopygia guttata]
Length = 715
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI++ +GIPV +Q L++N L+DD ++
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIQRLEGIPVSQQHLIWNNMELKDDYCLDDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|70998612|ref|XP_754028.1| UV excision repair protein (RadW) [Aspergillus fumigatus Af293]
gi|66851664|gb|EAL91990.1| UV excision repair protein (RadW), putative [Aspergillus
fumigatus Af293]
gi|159126238|gb|EDP51354.1| UV excision repair protein (RadW), putative [Aspergillus
fumigatus A1163]
Length = 376
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + F+ + + F IE +TV ++KEKI K +G VP+ L+++G++LQDD+ +E
Sbjct: 1 MKLTFKDLKQQKFVIEAEPSETVGQVKEKISKEKGWEVPQLKLIYSGKILQDDKTIETYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSK 88
I + I +V+ KP+ + ++PS+
Sbjct: 61 IEEKGFIVCMVS---KPKAPSSAATPSQ 85
>gi|10140775|gb|AAG13606.1|AC051633_22 ubiquitin-like protein [Oryza sativa Japonica Group]
Length = 79
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK + + +TV IKE++E +GIP P+QTL++ G+ L DD E C++ S + L
Sbjct: 13 GKEVEVSIEATETVARIKEQVEAAEGIPPPQQTLIYGGRQLADDMTAEMCDLRHGSELHL 72
Query: 70 LVA 72
++A
Sbjct: 73 VLA 75
>gi|226509442|ref|NP_001150268.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
gi|195637954|gb|ACG38445.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
Length = 314
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K ++V DT+ +IK KI +GI +Q L F G L+ D + I+ NS + L
Sbjct: 19 KTVLLDVKSTDTIDQIKSKIGALEGIDNSQQELFFAGSHLEKDNRLADYNIMTNSCVDLY 78
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
V + + + ++IPS KT + L++ + +V +K I +M
Sbjct: 79 V---------------TDGMQISVSIPSVWKT------IKLNVMKSQSVADVKAMIEQMG 117
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPS 170
IP++ ++ +L+D++ L C L + + V VRP+
Sbjct: 118 GIPLDEQILMHGCQKLEDNKLLSQCGLSNGHTLHVLVRPT 157
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 7 PQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSR 66
P K + V +V ++K IE+ GIP+ +Q L+ Q L+D++ + C +
Sbjct: 90 PSVWKTIKLNVMKSQSVADVKAMIEQMGGIPLDEQILMHGCQKLEDNKLLSQCGLSNGHT 149
Query: 67 IQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKI 126
+ +LV P+ ++H+ +++ L LD+ TV +K I
Sbjct: 150 LHVLV-------------RPTDRLHISVDVDGEET-------LNLDVKSWYTVADVKLMI 189
Query: 127 HEMESIPVNRLLV---QSSGAELQDHRSLRDCELMDNAEI 163
+E +P ++ Q GA + L+D E + N I
Sbjct: 190 DTLEGLPARTQILMHTQPGGA----NTVLKDIETLQNQGI 225
>gi|223942441|gb|ACN25304.1| unknown [Zea mays]
gi|414871092|tpg|DAA49649.1| TPA: putative ubiquitin family protein [Zea mays]
Length = 314
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K ++V DT+ +IK KI +GI +Q L F G L+ D + I+ NS + L
Sbjct: 19 KTVLLDVKSTDTIDQIKSKIGALEGIDNSQQELFFAGSHLEKDNRLADYNIMTNSCVDLY 78
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
V + + + ++IPS KT + L++ + +V +K I +M
Sbjct: 79 V---------------TDGMQISVSIPSVWKT------IKLNVMKSQSVADVKAMIEQMG 117
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPS 170
IP++ ++ +L+D++ L C L + + V VRP+
Sbjct: 118 GIPLDEQILMHGCQKLEDNKLLSQCGLSNGHTLHVLVRPT 157
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 7 PQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSR 66
P K + V +V ++K IE+ GIP+ +Q L+ Q L+D++ + C +
Sbjct: 90 PSVWKTIKLNVMKSQSVADVKAMIEQMGGIPLDEQILMHGCQKLEDNKLLSQCGLSNGHT 149
Query: 67 IQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKI 126
+ +LV P+ ++H+ +++ L LD+ TV +K I
Sbjct: 150 LHVLV-------------RPTDRLHISVDVDGEET-------LNLDVKSWYTVADVKLMI 189
Query: 127 HEMESIPVNRLLV---QSSGAELQDHRSLRDCELMDNAEI 163
+E +P ++ Q GA + L+D E + N I
Sbjct: 190 DTLEGLPARTQILMHTQPGGA----NTVLKDIETLQNQGI 225
>gi|182407852|gb|ACB87917.1| polyubiquitin 2 [Malus x domestica]
Length = 177
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 46 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 105
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ ++ + I + T + L+++ +DT+
Sbjct: 106 IQKESTLHLVL-----------------RLRRGMQIFVKTLT---GKTITLEVESSDTID 145
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSL 152
+K KI + + IP ++ + +G +L+D R+L
Sbjct: 146 NVKAKIQDKDGIPPDQQTLIFAGKQLEDGRTL 177
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 39/214 (18%)
Query: 34 QGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLK 93
+GIP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 3 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT-------- 54
Query: 94 INIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLR 153
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L
Sbjct: 55 ------GKT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 102
Query: 154 DCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELR 213
D + + + + +R R +++ V T G K I +EV +SD + ++
Sbjct: 103 DYNIQKESTLHLVLRLR-------------RGMQIFVKTLTG-KTITLEVESSDTIDNVK 148
Query: 214 KELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSF 247
++Q +P D I+ ++D R+
Sbjct: 149 AKIQD-----KDGIPPDQQTLIFAGKQLEDGRTL 177
>gi|408776165|gb|AFU90137.1| polyubiquitin, partial [Paeonia lactiflora]
Length = 169
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 34/197 (17%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVK 80
DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+
Sbjct: 2 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 61
Query: 81 TEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQ 140
+ + KT + L+++ +DT+ +K KI + E IP ++ +
Sbjct: 62 VKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 101
Query: 141 SSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIP 200
+G +L+D R+L D + + + + +R GM ++ V T G K I
Sbjct: 102 FAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTIT 147
Query: 201 VEVNASDNVSELRKELQ 217
+EV +SD + ++ ++Q
Sbjct: 148 LEVESSDTIDNVKAKIQ 164
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 58 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 117
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 118 IQKESTLHLVL 128
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 29/162 (17%)
Query: 116 NDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATS 175
+DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 1 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR------- 53
Query: 176 TTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFI 235
GM ++ V T G K I +EV +SD + ++ ++Q +P D I
Sbjct: 54 -LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLI 101
Query: 236 YKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+ ++D R+ +++ + T+ +IF ++TG
Sbjct: 102 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 143
>gi|385881402|gb|AFI98422.1| polyubiquitin-B, partial [Antricola delacruzi]
Length = 156
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 1 MDVIFEPQRGKAFTIEVG-FFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHC 59
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 3 MQIFVKTLTGKTITLEVEPGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 62
Query: 60 EILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTV 119
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 63 NIQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTI 102
Query: 120 LRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 103 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 151
>gi|347966512|ref|XP_001689324.2| AGAP001757-PA [Anopheles gambiae str. PEST]
gi|333470027|gb|EDO63229.2| AGAP001757-PA [Anopheles gambiae str. PEST]
Length = 1634
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 2 DVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEI 61
D+I E G F + V DTV +K +I+KY+GIP+ +Q L++N + L D +++ +
Sbjct: 7 DIIVETLTGSEFEVTVNDRDTVGYLKSEIQKYEGIPISQQHLLYNHKELSDAMEMKDIPL 66
Query: 62 LQNSRIQLLVASDNKP 77
++ SR++L++ P
Sbjct: 67 VKGSRVKLVLGMKGGP 82
>gi|307188572|gb|EFN73300.1| Ubiquitin-like protein 4A [Camponotus floridanus]
Length = 151
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 6/154 (3%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVE-HC 59
M VI + GK +++ +TVLE+K K+ GI VP+Q L+ G+ L D+ + +
Sbjct: 1 MKVIVKKLLGKECVVDILPSETVLELKHKVSDLLGIDVPQQRLLLTGKTLADENPLSFYP 60
Query: 60 EILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLP-LDMDVNDT 118
I S++ LLV + +SSP +K+ +++ S+ H++ + + VN+
Sbjct: 61 GIKDGSKLNLLVIKKTEEGSSKAKSSPQQKLGVQLLRDEVSRVLRHYYTVSETESIVNEL 120
Query: 119 VLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSL 152
+ LK K++ + + RL + A LQD ++
Sbjct: 121 IKDLKSKVNSLSYDDLERLAI----ALLQDQENV 150
>gi|60598636|gb|AAX25867.1| unknown [Schistosoma japonicum]
Length = 183
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 23/197 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + G T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MHIFVKTLTGNTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ +H+ + S KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRG-------------GMHIFVKT-STGKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTA---TSTT 177
+K KI + E IP + + S+G + +D R+ D + + + + +R +T
Sbjct: 101 NVKAKIQDKEGIPPVQHRLISAGKQSEDGRTSSDYTIQKESTLHLVLRLRGGMQIFVNTL 160
Query: 178 SSGMGPRKLKLLVLTQC 194
+ PR+L + +C
Sbjct: 161 TGKTTPRRLNPMTQWKC 177
>gi|449279914|gb|EMC87347.1| AN1-type zinc finger and ubiquitin domain-containing protein 1
[Columba livia]
Length = 699
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI++ +GIPV +Q L++N L+DD +
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIQRLEGIPVSQQHLIWNNTELKDDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|357151131|ref|XP_003575690.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin 4-like [Brachypodium
distachyon]
Length = 380
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 110/247 (44%), Gaps = 46/247 (18%)
Query: 4 IFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQD-DRDVEHCEIL 62
+ ++G+ T+EV DT+ E+K KI+ +G P +Q L+F + L+D + + I
Sbjct: 78 VMRRKQGRTITLEVDSLDTIDEVKSKIQVKEGFPKGQQCLIFGNKQLEDGELTLADHNIW 137
Query: 63 QNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRL 122
+ S I L++ K I ++ + L+++ DTV +
Sbjct: 138 KESTILLVL----------------KXIFVQ---------TMRGGTITLNVESTDTVNDV 172
Query: 123 KEKIHEMESI-PVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGM 181
K KI+E + P+ + L+ G +++D R+L D + + +DV ++
Sbjct: 173 KVKIYEKDGTRPIQQRLI-FCGKQMEDDRTLADYNIENGRTLDVKLKLQG---------- 221
Query: 182 GPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ------KLHQRYHFHLPQ--DGYF 233
G +++ V+ I +EV++ D + E++ ++Q K+ Q F Q DG F
Sbjct: 222 GRYAMQIYVMETRARWTIALEVDSLDTIDEVKSKIQVKEGFPKVQQCLIFDNKQLDDGKF 281
Query: 234 FIYKQNV 240
+ N+
Sbjct: 282 TLADHNI 288
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 4 IFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDR-DVEHCEIL 62
+ E + +EV DT+ E+K KI+ +G P +Q L+F+ + L D + + I
Sbjct: 230 VMETRARWTIALEVDSLDTIDEVKSKIQVKEGFPKVQQCLIFDNKQLDDGKFTLADHNIW 289
Query: 63 QNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRL 122
+ S I L++ Q SP++ ++I + + +PLD++ +DTV +
Sbjct: 290 RESTILLVLL----------QPSPTRGTTMRICVRT-----MDGKEIPLDVESSDTVDDV 334
Query: 123 KEKIHEMESI-PVNRLLVQSSGAELQDHRSLRDCEL 157
K KI+E + PV + L+ G L D +L D E+
Sbjct: 335 KMKIYEKDGTRPVQQRLIH-EGIRLLDDYTLADYEI 369
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 3 VIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEIL 62
+ + RG T+ V DTV ++K KI + G +Q L+F G+ ++DDR + I
Sbjct: 149 IFVQTMRGGTITLNVESTDTVNDVKVKIYEKDGTRPIQQRLIFCGKQMEDDRTLADYNI- 207
Query: 63 QNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRL 122
+N R ++K + + +I++ + L++D DT+ +
Sbjct: 208 ENGRTL-------DVKLKLQGGRYAMQIYV--------METRARWTIALEVDSLDTIDEV 252
Query: 123 KEKIHEMESIP-VNRLLV------QSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATS 175
K KI E P V + L+ L DH R+ ++ V ++PSPT +
Sbjct: 253 KSKIQVKEGFPKVQQCLIFDNKQLDDGKFTLADHNIWRESTIL-----LVLLQPSPTRGT 307
Query: 176 TTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKEL 216
T +++ V T G K IP++V +SD V +++ ++
Sbjct: 308 T---------MRICVRTMDG-KEIPLDVESSDTVDDVKMKI 338
>gi|317138690|ref|XP_001817078.2| UV excision repair protein rhp23 [Aspergillus oryzae RIB40]
gi|391863231|gb|EIT72542.1| nucleotide excision repair factor NEF2, RAD23 component
[Aspergillus oryzae 3.042]
Length = 378
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + F+ + + F I+ +TV ++KEKI K +G VP+ L+++G++LQDD+ +E
Sbjct: 1 MKLTFKDLKQQKFVIDAEPSETVGQVKEKISKEKGWEVPQLKLIYSGKILQDDKAIESYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSK 88
I + I +V+ KP+ + ++PS+
Sbjct: 61 IEEKGFIVCMVS---KPKASSSTATPSQ 85
>gi|74229710|ref|YP_308914.1| viral ubiquitin (v-ubi) [Trichoplusia ni SNPV]
gi|72259624|gb|AAZ67395.1| viral ubiquitin (v-ubi) [Trichoplusia ni SNPV]
Length = 77
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK+ TIEV DT+ ++K+KI +GIP +Q L++ G+ L+DDR+V
Sbjct: 1 MQVFVKTLTGKSITIEVEANDTIEQVKQKITDKEGIPPDQQRLIYGGKQLEDDRNVSDYN 60
Query: 61 ILQNSRIQLLV 71
I + S I L++
Sbjct: 61 IQKESTIHLVL 71
>gi|321117100|ref|NP_001189400.1| AN1-type zinc finger and ubiquitin domain-containing protein-like
[Danio rerio]
Length = 673
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+ V+ +K KI++ +GIPV +Q L++NG L+D+ +
Sbjct: 28 MELFIETLTGTCFQLRVSPFEQVVSVKAKIQRLEGIPVSQQHLIWNGMELEDEYCLHDYS 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ITEGCTLKLVLAMRGGP 104
>gi|429327265|gb|AFZ79025.1| ubiquitin family member protein [Babesia equi]
Length = 186
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 46/71 (64%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + E GK+ IE +TVL++K+K+ + Q IP+ +Q +++NG++L+D++ +
Sbjct: 100 MRISIETMTGKSVQIEATENETVLDVKKKLSEKQNIPLEQQRMIYNGKLLEDNKTLAEYN 159
Query: 61 ILQNSRIQLLV 71
I N+ IQL++
Sbjct: 160 IKNNAVIQLVL 170
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 14 TIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVAS 73
TI V LEI+ I + L + G + L ++R QL
Sbjct: 32 TIRVNTLYGPLEIRRNIRTIHDVKCGLSNLGYRGNIK-----------LYSNRRQLF--- 77
Query: 74 DNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIP 133
DN+ ++E S+ + I ++ + + +T + ++ N+TVL +K+K+ E ++IP
Sbjct: 78 DNEVYSESEHSNIAMCIEMRGGMRISIETMTGKS-VQIEATENETVLDVKKKLSEKQNIP 136
Query: 134 VNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTT 177
+ + + +G L+D+++L + + +NA I + +R TS T
Sbjct: 137 LEQQRMIYNGKLLEDNKTLAEYNIKNNAVIQLVLRLRGGVTSGT 180
>gi|395536787|ref|XP_003770393.1| PREDICTED: polyubiquitin-C-like, partial [Sarcophilus harrisii]
Length = 243
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 13 FTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVA 72
T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++
Sbjct: 66 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 125
Query: 73 SDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESI 132
Q+ ++ K I L++ PS DT+ +K KI + E I
Sbjct: 126 LRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIENVKAKIQDKEGI 165
Query: 133 PVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLT 192
P ++ + +G +L+D R+L D + + + + +R GM ++ V T
Sbjct: 166 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKT 212
Query: 193 QCGNKRIPVEVNASDNVSELRKELQ 217
G K I +EV D V + +LQ
Sbjct: 213 LTG-KTITLEVEPXDIVENILVQLQ 236
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 130 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 189
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 190 IQKESTLHLVL 200
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 101 KTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDN 160
K + ++ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D +
Sbjct: 58 KRNLWRLNITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 117
Query: 161 AEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLH 220
+ + + +R GM ++ V T G K I +EV SD + ++ ++Q
Sbjct: 118 STLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE 163
Query: 221 QRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
+P D I+ ++D R+ +++ + T+ +IF ++TG
Sbjct: 164 -----GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 215
>gi|356536322|ref|XP_003536688.1| PREDICTED: putative DNA repair protein RAD23-3-like [Glycine max]
Length = 408
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGI---PVPKQTLVFNGQVLQDDRDVE 57
M V + +G F IEV DTV E+K+ IE QG P +Q L+ G+VL+D +E
Sbjct: 1 MKVFVKTLKGTHFEIEVTPQDTVSEVKKNIETVQGADVYPAAQQMLIHQGKVLRDASTLE 60
Query: 58 HCEILQNSRIQLLVASDNKP--QVKTEQSSPSKKIHLKINIPSNS 100
++++N+ I ++++ P + T ++PS K +P+++
Sbjct: 61 ENKVVENTFIVIMLSKSKSPSGEGSTTSTAPSTKAPQTSTVPAST 105
>gi|18398638|ref|NP_566357.1| polyubiquitin 8 [Arabidopsis thaliana]
gi|75101960|sp|Q39256.1|UBQ8_ARATH RecName: Full=Polyubiquitin 8; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Contains: RecName:
Full=Ubiquitin-related 4; Contains: RecName:
Full=Ubiquitin-related 5; Contains: RecName:
Full=Ubiquitin-related 6; Contains: RecName:
Full=Ubiquitin-related 7; Contains: RecName:
Full=Ubiquitin-related 8; Flags: Precursor
gi|6681339|gb|AAF23256.1|AC015985_14 polyubiquitin (ubq8) [Arabidopsis thaliana]
gi|6682255|gb|AAF23307.1|AC016661_32 polyubiquitin [Arabidopsis thaliana]
gi|870794|gb|AAA68879.1| polyubiquitin [Arabidopsis thaliana]
gi|332641292|gb|AEE74813.1| polyubiquitin 8 [Arabidopsis thaliana]
Length = 631
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 117/260 (45%), Gaps = 31/260 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GI +Q L+F G+ L+D R +
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ S+ S K N S++ L L ++ +DT+
Sbjct: 139 IQKESTLHLVLRLCGGMQIFV--STFSGK-----NFTSDT--------LTLKVESSDTIE 183
Query: 121 RLKEKIHEMESIPVN--RLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTS 178
+K KI + E + + RL+ +D+R+L D + + + + + +R
Sbjct: 184 NVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRL--------- 234
Query: 179 SGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQ 238
G +K L + +EV +SD + ++ +LQ + +P D + I+
Sbjct: 235 RGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKER-----IPMDLHRLIFAG 289
Query: 239 NVMDDDRSFRWHHVGQGDTI 258
++ R+ +++ +G T+
Sbjct: 290 KPLEGGRTLAHYNIQKGSTL 309
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 43/226 (19%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K T++V D++ +K KI+ +GIP+ +Q L+F G+ L+D + I + S + L+
Sbjct: 13 KTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLV 72
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
+ Q+ Q+ K I L++ +DT+ +K KI + E
Sbjct: 73 LRLRGGMQIFV-QTLTGKTITLEVK-------------------SSDTIDNVKAKIQDKE 112
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLV 190
I + + +G +L+D R+L D + + + + +R GM ++ V
Sbjct: 113 GILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LCGGM-----QIFV 159
Query: 191 LTQCG----NKRIPVEVNASDNVSELRKELQKL------HQRYHFH 226
T G + + ++V +SD + ++ ++Q HQR FH
Sbjct: 160 STFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFH 205
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ G P +Q L+F G LQD R +
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I S + L + Q+ + S S + KT + L+++ +DT+
Sbjct: 453 IRNESTLHLFFHIRHGMQIFVKTFSFSGE-------TPTCKT------ITLEVESSDTID 499
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI IP++R + G L R+L D + + I G
Sbjct: 500 NVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIH--------QLFLQRGG 551
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ + T G K I +EV +SD ++ +++++Q
Sbjct: 552 M-----QIFIKTLTG-KTIILEVESSDTIANVKEKIQ 582
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 20/158 (12%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K T+EV DT+ +K KI+ GIP+ +Q L+F G+VL R + I + S I L
Sbjct: 486 KTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQL 545
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
Q+ + + I L+++ +DT+ +KEKI E
Sbjct: 546 FLQRGGMQIFIKTLTGKTII--------------------LEVESSDTIANVKEKIQVKE 585
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
I ++ ++ G +L+D +L D ++ + + + +R
Sbjct: 586 GIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVLR 623
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 126/324 (38%), Gaps = 80/324 (24%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRI-- 67
G+ F +EV DT+ +K K++ + IP+ L+F G+ L+ R + H I + S +
Sbjct: 252 GENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYL 311
Query: 68 --------QLLVASDNKPQVKTE--------------------QSSPS--------KKIH 91
Q+ V + + ++ E Q P+ K++
Sbjct: 312 VTRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELK 371
Query: 92 LKINIPSNSKTHHHHHHLPLDMDV----------------NDTVLRLKEKIHEMESIPVN 135
+ S HL L M + +DT+ +K KI + P +
Sbjct: 372 DGCTLADYSIQKESTLHLVLGMQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPD 431
Query: 136 RLLVQSSGAELQDHRSLRDCELMDNAEIDV--HVRPSPTATSTTSSGMGPRKLKLLVLTQ 193
+ ++ G +LQD R+L D + + + + + H+R T S G
Sbjct: 432 QQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFSGETP-------T 484
Query: 194 CGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVG 253
C K I +EV +SD + ++ ++Q + +P D I+ V+ R+ +++
Sbjct: 485 C--KTITLEVESSDTIDNVKVKIQ-----HKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQ 537
Query: 254 QGDTI----------EIFNGSVTG 267
+G TI +IF ++TG
Sbjct: 538 KGSTIHQLFLQRGGMQIFIKTLTG 561
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +KEKI+ +GI +Q L+F GQ L+D + +
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 612 IHKKSTLYLVL 622
>gi|255636258|gb|ACU18469.1| unknown [Glycine max]
Length = 160
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGI---PVPKQTLVFNGQVLQDDRDVE 57
M V + +G F IEV DTV E+K+ IE QG P +Q L+ G+VL+D +E
Sbjct: 1 MKVFVKTLKGTHFEIEVTPQDTVSEVKKNIETVQGADVYPAAQQMLIHQGKVLRDASTLE 60
Query: 58 HCEILQNSRIQLLVASDNKP--QVKTEQSSPSKKIHLKINIPSNS 100
++++N+ I ++++ P + T ++PS K +P+++
Sbjct: 61 ENKVVENTFIVIMLSKSKSPSGEGSTTSTAPSTKAPQTSTVPAST 105
>gi|403284842|ref|XP_003933761.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 1
[Saimiri boliviensis boliviensis]
Length = 153
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + K T+EV DT+ +K KI+ +GIP +Q L+F + L+D R++
Sbjct: 1 MQIFLKTLTSKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + SKT + L+++ +DT+
Sbjct: 61 IQKESTLHLILRLRGGMQIFVKTLT--------------SKT------ITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
+K KI + E IP ++ + +G +L+D R+L D
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + K T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 137 IQKESILHLVL 147
>gi|395501173|ref|XP_003754972.1| PREDICTED: LOW QUALITY PROTEIN: AN1-type zinc finger protein 4
[Sarcophilus harrisii]
Length = 760
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI++ +GIP+ +Q L++N L+DD +
Sbjct: 54 MELFIETLTGTCFELRVSPFETVISVKAKIQRLEGIPICQQHLIWNNMELEDDYCLNDYN 113
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 114 ISEGCTLKLVLAMRGGP 130
>gi|91088643|ref|XP_974406.1| PREDICTED: similar to mCG129107 [Tribolium castaneum]
gi|270011686|gb|EFA08134.1| hypothetical protein TcasGA2_TC005738 [Tribolium castaneum]
Length = 563
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ + G +F + V DTV EIK++I++ +GIP+ +Q L+F + L+D R +
Sbjct: 15 MEIQIDTLMGTSFDMRVSATDTVREIKQRIQRVEGIPIHQQNLIFQSKELKDSRRLCDAG 74
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHL 92
I S I+L++A P + T + S S + H+
Sbjct: 75 IKNGSIIKLVIAMKGGP-ISTRRLSVSCEHHM 105
>gi|334313731|ref|XP_003339943.1| PREDICTED: AN1-type zinc finger and ubiquitin domain-containing
protein 1 [Monodelphis domestica]
Length = 741
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI++ +GIP+ +Q L++N L+DD +
Sbjct: 54 MELFIETLTGTCFELRVSPFETVISVKAKIQRLEGIPICQQHLIWNNMELEDDYCLNDYN 113
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 114 ISEGCTLKLVLAMRGGP 130
>gi|379771652|gb|AFD18177.1| ubiquitin C, partial [Mylabris cichorii]
Length = 204
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 34/197 (17%)
Query: 21 DTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVK 80
DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L++ Q+
Sbjct: 5 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 64
Query: 81 TEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQ 140
+ + KT + L+++ +DT+ +K KI + E IP ++ +
Sbjct: 65 VKTLT--------------GKT------ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 104
Query: 141 SSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIP 200
+G +L+D R+L D + + + + +R GM ++ V T G K I
Sbjct: 105 FAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTIT 150
Query: 201 VEVNASDNVSELRKELQ 217
+EV SD + + ++Q
Sbjct: 151 LEVEPSDTIENVEAKIQ 167
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 61 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 120
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 121 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEPSDTIE 160
Query: 121 RLKEKIHEMESIP 133
++ KI + E IP
Sbjct: 161 NVEAKIQDKEGIP 173
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 116 NDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATS 175
+DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 4 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR------- 56
Query: 176 TTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFI 235
GM ++ V T G K I +EV SD + ++ ++Q +P D I
Sbjct: 57 -LRGGM-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLI 104
Query: 236 YKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSVTGGS 269
+ ++D R+ +++ + T+ +IF ++TG +
Sbjct: 105 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 148
>gi|363735451|ref|XP_003641561.1| PREDICTED: LOW QUALITY PROTEIN: AN1-type zinc finger and ubiquitin
domain-containing protein 1 [Gallus gallus]
Length = 735
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI++ +GIP+ +Q L++N L+DD +
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIQRLEGIPISQQHLIWNNVELKDDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|357111457|ref|XP_003557529.1| PREDICTED: polyubiquitin 3-like [Brachypodium distachyon]
Length = 151
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLADGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + I L++ PL T+
Sbjct: 61 IQKESTLHLVLRLRGGMQIIVQHYVSMTTITLEVE--------------PL-----YTID 101
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + IP + +G +++D +L DC + + + + + +R
Sbjct: 102 IVKAKIQDTVGIPAGEQRLIFAGRQVEDGCTLADCSIQNESTLTLIIR 149
>gi|426255964|ref|XP_004021617.1| PREDICTED: LOW QUALITY PROTEIN: AN1-type zinc finger protein 4,
partial [Ovis aries]
Length = 756
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+ ++ +K KI++ +GIP+ +Q L++N L+DD + +
Sbjct: 52 MELFIETLTGTCFELRVSPFEAIISVKAKIQRLEGIPICQQHLIWNNMELEDDYCLNYYN 111
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 112 ISEGCTLKLVLAMRGGP 128
>gi|343959630|dbj|BAK63672.1| AN1-type zinc finger and ubiquitin domain-containing protein 1 [Pan
troglodytes]
Length = 727
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI++ +GIP+ +Q L++N L++D +
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIQRLEGIPICRQHLIWNNMELENDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|392569695|gb|EIW62868.1| UV excision repair protein Rad23 [Trametes versicolor FP-101664
SS1]
Length = 388
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K F IE DTV ++K+KI++ QG V Q L+++G+VL D + +E CEI + + L+
Sbjct: 11 KVFQIEAEGTDTVADLKQKIQETQGHGVDSQKLIYSGKVLPDSKSIESCEIKEKDFLVLM 70
Query: 71 VASDNKPQVKT 81
V S KP T
Sbjct: 71 V-SKPKPTAAT 80
>gi|332244162|ref|XP_003271242.1| PREDICTED: AN1-type zinc finger protein 4 [Nomascus leucogenys]
Length = 727
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI + +GIPV +Q L++N L++D +
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPVCRQHLIWNNMELENDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|383859237|ref|XP_003705102.1| PREDICTED: ubiquitin-like protein 4A-like [Megachile rotundata]
Length = 150
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 15/158 (9%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVE-HC 59
M VI + +GK +++ DTVL++K K+ GI VP+Q L+ G+ L D+ + +
Sbjct: 1 MKVIVKKLQGKECVVDIMPSDTVLQLKHKVSDLLGIDVPQQRLLLTGKTLADENPLSFYP 60
Query: 60 EILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLK--INIPSN--SKTHHHHHHLP-LDMD 114
I S++ LLV + E SS K H K INI + S+ H++ P +
Sbjct: 61 GIKDGSKLNLLVI-----KKADEGSSEGKASHSKSGINILRDEISRVLRHYYSEPETEWI 115
Query: 115 VNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSL 152
VN+ + LK K++ + + RL + A LQD +L
Sbjct: 116 VNELIKDLKNKVNNLSYDDLERL----ATALLQDQENL 149
>gi|125554110|gb|EAY99715.1| hypothetical protein OsI_21697 [Oryza sativa Indica Group]
Length = 304
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 8 QRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRI 67
R T+ V FD V+EIK+K+E GIPV Q L++ + L DD D+E+ I S +
Sbjct: 13 SRSCRLTVVVEPFDKVVEIKQKVESCYGIPVTAQCLLYWNRELADDYDIEYYPIFDGSHV 72
Query: 68 QLLV 71
LL+
Sbjct: 73 LLLL 76
>gi|241644784|ref|XP_002409683.1| hypothetical protein IscW_ISCW008021 [Ixodes scapularis]
gi|215501410|gb|EEC10904.1| hypothetical protein IscW_ISCW008021 [Ixodes scapularis]
Length = 791
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
++V E G AF + V DTV+ IK +I + +GIPV +Q L++ Q L D+ + C
Sbjct: 7 IEVFIETLHGTAFELLVSPADTVVSIKTRISRLEGIPVSQQHLIWQCQELPDESSLHDCN 66
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHL 92
I + ++L++ P + T ++S ++ L
Sbjct: 67 ITDGATLKLVLGMRGGP-INTRKASAEERPSL 97
>gi|71030138|ref|XP_764711.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351667|gb|EAN32428.1| hypothetical protein TP02_0142 [Theileria parva]
Length = 183
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 48/71 (67%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
+++ + +GK ++V +TVL++K K+EK Q IPV +Q L+F+G++L++ + +
Sbjct: 108 LNISVQTMQGKTIQLQVSQNETVLDLKNKLEKEQTIPVDQQRLIFDGKLLENGKTISDYG 167
Query: 61 ILQNSRIQLLV 71
I +N+ IQL++
Sbjct: 168 IKENAVIQLVL 178
>gi|413949281|gb|AFW81930.1| hypothetical protein ZEAMMB73_693456 [Zea mays]
Length = 153
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T++V DT+ +K KI+ +GI +Q L+F G+ L+D R + I + S + L
Sbjct: 10 GKTITLDVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLADYNIQKESTLPL 69
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ +K + + + ++++ NDT+ R+KE + E
Sbjct: 70 VLRLKGGTMIKVKTLT--------------------RKEIEINIEPNDTIDRIKEHVEER 109
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRD 154
E IP + + +G +L D ++ +D
Sbjct: 110 EGIPPVQQRLIYAGKQLADDKTAKD 134
>gi|157138611|ref|XP_001664278.1| hypothetical protein AaeL_AAEL003901 [Aedes aegypti]
gi|108880566|gb|EAT44791.1| AAEL003901-PA [Aedes aegypti]
Length = 1122
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
++I E G F + V DTV IK KI+KY+GIP +Q L++N + L D +++
Sbjct: 9 FEIIVETLTGYEFEVTVSDRDTVGYIKSKIQKYEGIPANQQHLLYNHKELSDTTEMKDIP 68
Query: 61 ILQNSRIQLLVASDNKP 77
++ SR++L++ P
Sbjct: 69 LVNGSRLKLVLRMKGGP 85
>gi|312374946|gb|EFR22405.1| hypothetical protein AND_15312 [Anopheles darlingi]
Length = 1705
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 2 DVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEI 61
D+I E G F + V DTV IK KI+KY+GIPV +Q L++ + L D ++ +
Sbjct: 7 DIIVETLTGSEFEVTVNDRDTVGYIKSKIQKYEGIPVNQQHLLYKHKELNDAMVMKDIPL 66
Query: 62 LQNSRIQLLVASDNKP 77
+ SR++L++ P
Sbjct: 67 VNGSRLKLVLGMKGGP 82
>gi|281203713|gb|EFA77909.1| ubiquitin/ribosomal protein S27a fusion protein [Polysphondylium
pallidum PN500]
Length = 167
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 11 MQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 70
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ ++ +S K I LK+ + +D++
Sbjct: 71 IQKESTLHLVLRLRGGMEIFI-KSLTGKIITLKV-------------------EDSDSIE 110
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCEL 157
+K KI E E IP ++ + G L D R+L D +
Sbjct: 111 NVKSKIQEKEGIPPDQQRLIFVGRILDDGRTLSDYNI 147
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 109 LPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+ L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 23 ITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 82
Query: 169 PSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLP 228
GM + + K I ++V SD++ ++ ++Q+ +P
Sbjct: 83 --------LRGGME------IFIKSLTGKIITLKVEDSDSIENVKSKIQEKE-----GIP 123
Query: 229 QDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIF 261
D I+ ++DD R+ +++ + T+ F
Sbjct: 124 PDQQRLIFVGRILDDGRTLSDYNIQKESTLIWF 156
>gi|431901329|gb|ELK08356.1| AN1-type zinc finger and ubiquitin domain-containing protein 1
[Pteropus alecto]
Length = 741
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+ V+ +K KI++ +GIPV +Q L++N L+DD +
Sbjct: 54 MELFIETLTGTCFELRVSPFEAVISVKAKIQRLEGIPVCQQHLIWNNMELEDDYCLNDYN 113
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 114 ISEGCTLKLVLAMRGGP 130
>gi|218198733|gb|EEC81160.1| hypothetical protein OsI_24083 [Oryza sativa Indica Group]
gi|222636075|gb|EEE66207.1| hypothetical protein OsJ_22339 [Oryza sativa Japonica Group]
Length = 240
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 54 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 113
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L + + +D +
Sbjct: 114 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLAV-------------------ESSDKID 153
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + + +L+D R+L D + + + + +R
Sbjct: 154 NVKAKIQDKEGIPPDQQRLIFADKQLEDGRTLADYNIQKESTLHLVLR 201
>gi|119607061|gb|EAW86655.1| AN1, ubiquitin-like, homolog (Xenopus laevis), isoform CRA_b [Homo
sapiens]
Length = 701
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI + +GIP+ +Q L++N L++D +
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|68304162|ref|YP_249630.1| ubiquitin [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67972991|gb|AAY83957.1| ubiquitin [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 78
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK+ TIE+ DT+ ++K+KI +GIP +Q L++ G+ L+DDR+V
Sbjct: 1 MQVFVKTLTGKSITIELESNDTIEQVKQKITDKEGIPPDQQRLIYGGKQLEDDRNVSDYN 60
Query: 61 ILQNSRIQLLV 71
I + S I L++
Sbjct: 61 IQKESTIHLVL 71
>gi|326923591|ref|XP_003208018.1| PREDICTED: LOW QUALITY PROTEIN: AN1-type zinc finger and ubiquitin
domain-containing protein 1-like [Meleagris gallopavo]
Length = 735
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI++ +GIP+ +Q L++N L+DD +
Sbjct: 28 MELFIETLTGTCFELCVSPFETVISVKAKIQRLEGIPISQQHLIWNNVELKDDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|158258375|dbj|BAF85158.1| unnamed protein product [Homo sapiens]
Length = 727
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI + +GIP+ +Q L++N L++D +
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|123471218|ref|XP_001318810.1| polyubiquitin [Trichomonas vaginalis G3]
gi|123479158|ref|XP_001322738.1| polyubiquitin [Trichomonas vaginalis G3]
gi|123501326|ref|XP_001328048.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121901578|gb|EAY06587.1| polyubiquitin, putative [Trichomonas vaginalis G3]
gi|121905590|gb|EAY10515.1| polyubiquitin, putative [Trichomonas vaginalis G3]
gi|121910986|gb|EAY15825.1| polyubiquitin, putative [Trichomonas vaginalis G3]
Length = 153
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + ++K KI+ +GIP +Q L+F G+ L+D ++
Sbjct: 1 MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + H+ L+++ D +
Sbjct: 61 IQKDSTLHLVLRLRGGMQIFVKTLTGK--------------------HITLEVEPTDRIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D +L+D + ++ + + +R
Sbjct: 101 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 148
>gi|190341070|ref|NP_777550.2| AN1-type zinc finger protein 4 [Homo sapiens]
gi|190341072|ref|NP_001121796.1| AN1-type zinc finger protein 4 [Homo sapiens]
gi|121944435|sp|Q86XD8.2|ZFAN4_HUMAN RecName: Full=AN1-type zinc finger protein 4; AltName:
Full=AN1-type zinc finger and ubiquitin
domain-containing protein-like 1
gi|71052213|gb|AAH45587.2| ANUBL1 protein [Homo sapiens]
gi|119607059|gb|EAW86653.1| AN1, ubiquitin-like, homolog (Xenopus laevis), isoform CRA_a [Homo
sapiens]
gi|119607060|gb|EAW86654.1| AN1, ubiquitin-like, homolog (Xenopus laevis), isoform CRA_a [Homo
sapiens]
gi|119607062|gb|EAW86656.1| AN1, ubiquitin-like, homolog (Xenopus laevis), isoform CRA_a [Homo
sapiens]
gi|189067309|dbj|BAG37019.1| unnamed protein product [Homo sapiens]
Length = 727
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI + +GIP+ +Q L++N L++D +
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|11275984|gb|AAG33850.1|AF311324_1 ubiquitin-like fusion protein [Homo sapiens]
Length = 727
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI + +GIP+ +Q L++N L++D +
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|440893484|gb|ELR46228.1| AN1-type zinc finger and ubiquitin domain-containing protein 1 [Bos
grunniens mutus]
Length = 728
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+ ++ +K KI++ +GIP+ +Q L++N L+DD + +
Sbjct: 28 MELFIETLTGTCFELRVSPFEAIISVKAKIQRLEGIPICQQHLIWNNMELEDDYCLNYYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I ++L++A P
Sbjct: 88 ISDGCTLKLVLAMRGGP 104
>gi|332834063|ref|XP_521678.3| PREDICTED: AN1-type zinc finger protein 4 isoform 2 [Pan
troglodytes]
gi|332834065|ref|XP_003312600.1| PREDICTED: AN1-type zinc finger protein 4 isoform 1 [Pan
troglodytes]
gi|410043823|ref|XP_003951694.1| PREDICTED: AN1-type zinc finger protein 4 [Pan troglodytes]
Length = 727
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI + +GIP+ +Q L++N L++D +
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|123390682|ref|XP_001299927.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121880876|gb|EAX86997.1| polyubiquitin [Trichomonas vaginalis G3]
Length = 153
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + ++K KI+ +GIP +Q L+F G+ L+D ++
Sbjct: 1 MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYS 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I ++S + L++ Q+ + + H+ L+++ D +
Sbjct: 61 IQKDSTLHLVLRLRGGMQIFVKTLTGK--------------------HITLEVEPTDRIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D +L+D + ++ + + +R
Sbjct: 101 DVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLR 148
>gi|281343974|gb|EFB19558.1| hypothetical protein PANDA_015918 [Ailuropoda melanoleuca]
Length = 728
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+ V+ +K KI++ +GIP+ +Q L++N L+DD +
Sbjct: 28 MELFIETLTGTCFELRVSPFEAVISVKAKIQRLEGIPICQQHLIWNNMELEDDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|403284846|ref|XP_003933763.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 3
[Saimiri boliviensis boliviensis]
Length = 153
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + K T+EV DT+ +K KI+ +GIP +Q L+F + L+D R++
Sbjct: 1 MLIFLKTLTSKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ SK I L++ PS DT+
Sbjct: 61 IQKESTLHLILRLRGGMQIFV-KTLTSKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRD 154
+K KI + E IP ++ + +G +L+D R+L D
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + K T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLV 71
I + S + L++
Sbjct: 137 IQKESILHLVL 147
>gi|297686376|ref|XP_002820727.1| PREDICTED: AN1-type zinc finger protein 4 isoform 1 [Pongo abelii]
gi|297686378|ref|XP_002820728.1| PREDICTED: AN1-type zinc finger protein 4 isoform 2 [Pongo abelii]
Length = 726
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+TV+ +K KI + +GIP+ +Q L++N L++D +
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|344274330|ref|XP_003408970.1| PREDICTED: LOW QUALITY PROTEIN: AN1-type zinc finger and ubiquitin
domain-containing protein 1-like [Loxodonta africana]
Length = 736
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+ V+ +K KI++ +GIP+ +Q L++N L+DD +
Sbjct: 28 MELFIETLTGTCFELRVSPFEAVISVKAKIQRLEGIPICQQHLIWNNMELEDDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|301781746|ref|XP_002926289.1| PREDICTED: LOW QUALITY PROTEIN: AN1-type zinc finger and ubiquitin
domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 759
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+ V+ +K KI++ +GIP+ +Q L++N L+DD +
Sbjct: 54 MELFIETLTGTCFELRVSPFEAVISVKAKIQRLEGIPICQQHLIWNNMELEDDYCLNDYN 113
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 114 ISEGCTLKLVLAMRGGP 130
>gi|55296615|dbj|BAD69317.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55297268|dbj|BAD69053.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 304
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 13 FTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLV 71
T+ V FD V+EIK+K+E GIPV Q L++ + L DD D+E+ I S + LL+
Sbjct: 18 LTVVVEPFDKVVEIKQKVESCYGIPVTAQCLLYWNRELADDHDIEYYPIFDGSHVLLLL 76
>gi|403276745|ref|XP_003930048.1| PREDICTED: LOW QUALITY PROTEIN: AN1-type zinc finger protein 4
[Saimiri boliviensis boliviensis]
Length = 759
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+ V+ +K KI++ +GIP+ +Q L++N L+DD +
Sbjct: 54 MELFIETLTGTCFELRVSPFEAVISVKTKIQRLEGIPICQQHLIWNNMELEDDYCLNDYN 113
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 114 ISEGCTLKLVLAMRGGP 130
>gi|156376682|ref|XP_001630488.1| predicted protein [Nematostella vectensis]
gi|156217510|gb|EDO38425.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
MD+ + G AF + V F+T++ +K KI++ +GIP+ +Q L++ L+DD +
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLEGIPISQQHLIWRTTELEDDYCLHDYN 60
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 61 ICDGATLKLVLAMRGGP 77
>gi|395862630|ref|XP_003803543.1| PREDICTED: LOW QUALITY PROTEIN: AN1-type zinc finger protein 4
[Otolemur garnettii]
Length = 759
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+ V+ +K KI++ +GIP+ +Q L++N L+DD +
Sbjct: 54 MELFIETLTGTCFELRVSPFEAVISVKAKIQRLEGIPICQQHLIWNNMELEDDYCLNDYN 113
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 114 ISEGCTLKLVLAMRGGP 130
>gi|238503490|ref|XP_002382978.1| UV excision repair protein (RadW), putative [Aspergillus flavus
NRRL3357]
gi|220690449|gb|EED46798.1| UV excision repair protein (RadW), putative [Aspergillus flavus
NRRL3357]
Length = 439
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 13 FTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVA 72
F I+ +TV ++KEKI K +G VP+ L+++G++LQDD+ +E I + I +V+
Sbjct: 74 FVIDAEPSETVGQVKEKISKEKGWEVPQLKLIYSGKILQDDKAIESYNIEEKGFIVCMVS 133
Query: 73 SDNKPQVKTEQSSPSK 88
KP+ + ++PS+
Sbjct: 134 ---KPKASSSTATPSQ 146
>gi|384493836|gb|EIE84327.1| UV excision repair protein Rad23 [Rhizopus delemar RA 99-880]
Length = 386
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K F ++V DT+L +KEKI++ QG V +Q L+F+G++L DD+ VE I + + ++
Sbjct: 14 KQFKLDVDSSDTILSVKEKIQESQGHAVAQQKLIFSGKILVDDKKVEDYNITEKDFLVVM 73
Query: 71 VA 72
VA
Sbjct: 74 VA 75
>gi|83764932|dbj|BAE55076.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 403
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 13 FTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVA 72
F I+ +TV ++KEKI K +G VP+ L+++G++LQDD+ +E I + I +V+
Sbjct: 38 FVIDAEPSETVGQVKEKISKEKGWEVPQLKLIYSGKILQDDKAIESYNIEEKGFIVCMVS 97
Query: 73 SDNKPQVKTEQSSPSK 88
KP+ + ++PS+
Sbjct: 98 ---KPKASSSTATPSQ 110
>gi|409045113|gb|EKM54594.1| hypothetical protein PHACADRAFT_258558 [Phanerochaete carnosa
HHB-10118-sp]
Length = 415
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K F ++ +TV ++K+KIE+ G PV Q L+++GQVL DD+ VE C I + + L+
Sbjct: 11 KTFQLDAEPSETVADLKKKIEEGHGHPVATQKLIYSGQVLGDDKTVESCNIKEKGFLVLM 70
Query: 71 V 71
V
Sbjct: 71 V 71
>gi|402863905|ref|XP_003896232.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Papio anubis]
Length = 177
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT +K KI+ +GIP+ +Q L+F G+ L+D R + C
Sbjct: 51 MQIFVKTLAGKTITLEVEPSDTTENVKAKIQAKEGIPLDQQRLIFAGKQLEDGRTLSDCN 110
Query: 61 ILQNSRIQL 69
I + S + L
Sbjct: 111 IQKESILHL 119
>gi|116783396|gb|ABK22925.1| unknown [Picea sitchensis]
Length = 262
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 116/260 (44%), Gaps = 35/260 (13%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M V + GK ++EV D + +K I+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQVFVKTLTGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E I ++ + +G +L+D R+L D + + I + S TS
Sbjct: 101 NVKAKIQDKEGILPDQQSLIFAGKQLEDGRNLADYNIQKESTI---LGTSFIRVRLTSD- 156
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
+ + V+T G + I + V SD + +++ ++Q +P I+
Sbjct: 157 -----MLIFVITLTG-EAITLVVATSDTIYDVKAKIQGKK-----GIPPFRQRLIFAGKQ 205
Query: 241 MDDDRSFRWHHVGQGDTIEI 260
++D R+ ++++ + T+ +
Sbjct: 206 LEDRRNLAYYNIQKWSTLHV 225
>gi|242039395|ref|XP_002467092.1| hypothetical protein SORBIDRAFT_01g019440 [Sorghum bicolor]
gi|241920946|gb|EER94090.1| hypothetical protein SORBIDRAFT_01g019440 [Sorghum bicolor]
Length = 249
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K ++V DT+ +IK +I +GI +Q L F G L+ D + I+ NS + L
Sbjct: 19 KTVPLDVKSTDTIDQIKSQISALEGIDSSQQALFFAGNQLEKDNRLADYNIMANSCVDLY 78
Query: 71 VASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEME 130
V + + + ++IPS KT + L++ + +V +K I +
Sbjct: 79 V---------------TDGMQISVSIPSVGKT------IKLNLKKSQSVADVKAVIEQKG 117
Query: 131 SIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPS 170
IP++ ++ +L+D++ L C L + + V V P+
Sbjct: 118 GIPLDEQILMYGCQKLEDNKLLSQCGLSNGHTLHVLVCPT 157
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 23/154 (14%)
Query: 7 PQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSR 66
P GK + + +V ++K IE+ GIP+ +Q L++ Q L+D++ + C +
Sbjct: 90 PSVGKTIKLNLKKSQSVADVKAVIEQKGGIPLDEQILMYGCQKLEDNKLLSQCGLSNGHT 149
Query: 67 IQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKI 126
+ +LV P+ K+ + +++ + +D+ TV +K I
Sbjct: 150 LHVLVC-------------PTDKLRISVDVDG-------ERTINVDVKSWYTVADVKLMI 189
Query: 127 HEMESIPVNRLLV---QSSGAELQDHRSLRDCEL 157
+E +P + ++ Q GA Q ++L+ C +
Sbjct: 190 ETLEGLPASTQILMRTQPGGANTQYSKTLKHCRI 223
>gi|358056787|dbj|GAA97450.1| hypothetical protein E5Q_04129 [Mixia osmundae IAM 14324]
Length = 434
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 11 KAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLL 70
K FT+E+ T+L++K+KIE QG V Q ++F+G+VL DD+ + C I + + L+
Sbjct: 41 KTFTLELEPSQTILDLKQKIESDQGHAVALQKIIFSGKVLADDKTIGDCNIKEKDFMVLM 100
Query: 71 VASDNKPQVKT 81
V NKP+
Sbjct: 101 V---NKPKASA 108
>gi|298713601|emb|CBJ27129.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 453
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK TI +TVL++K+K++ QGIP +Q +++ GQ DDR + C I +N +
Sbjct: 167 GKQHTIRAFPSETVLDVKKKVQDTQGIPCEQQRIIYAGQQTSDDRTLRDCNI-RNGSVAH 225
Query: 70 LVASDNKPQV 79
LV S KP +
Sbjct: 226 LVLSLRKPVI 235
>gi|10719701|gb|AAG22093.1| ubiquitin [Scyliorhinus torazame]
Length = 173
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T EV DT+ +K KI+ +GIP +Q L+F G+ L D R +
Sbjct: 25 MQIFVKTLTGKTITXEVEPSDTIENVKAKIQXKEGIPPDQQRLIFAGKQLXDGRTLSDYN 84
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + +++ +DT+
Sbjct: 85 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITXEVEPSDTIE 124
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI E IP ++ + +G +L++ R+L D + + + + +R
Sbjct: 125 NVKAKIQXKEGIPPDQQRLIFAGKQLEEXRTLSDYNIQKXSTLHLVLR 172
>gi|355782751|gb|EHH64672.1| AN1-type zinc finger protein 4 [Macaca fascicularis]
Length = 725
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+T++ +K KI + +GIP+ +Q L++N L++D +
Sbjct: 28 MELFIETLTGTCFELRVSPFETIISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 88 ISEGCTLKLVLAMRGGP 104
>gi|149049671|gb|EDM02125.1| rCG29664, isoform CRA_a [Rattus norvegicus]
Length = 717
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M++ E G F + V F+ V+ +K KI++ +GIP+ +Q L++N L+DD +
Sbjct: 54 MELFIETLTGTCFELRVSPFEAVISVKGKIQRLEGIPICQQHLIWNNMELEDDYCLNDYN 113
Query: 61 ILQNSRIQLLVASDNKP 77
I + ++L++A P
Sbjct: 114 ISEGCTLKLVLAMRGGP 130
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,230,594,735
Number of Sequences: 23463169
Number of extensions: 175555296
Number of successful extensions: 629411
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3356
Number of HSP's successfully gapped in prelim test: 426
Number of HSP's that attempted gapping in prelim test: 615633
Number of HSP's gapped (non-prelim): 8762
length of query: 269
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 129
effective length of database: 9,074,351,707
effective search space: 1170591370203
effective search space used: 1170591370203
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)