BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044874
(269 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P59669|UBIQP_GEOCY Polyubiquitin OS=Geodia cydonium PE=2 SV=2
Length = 457
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + VR G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVVR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L+V Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVVRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 430 LEDGRTLSDYNIQKESTL 447
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A OS=Caenorhabditis elegans GN=ubq-1 PE=2 SV=1
Length = 838
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q I +K I + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQ-----------IFVKTLIGKT---------ITLEVEASDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV ASD + ++ ++Q +P D I+
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 809
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 810 LEDGRTLSDYNIQKESTL 827
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 745 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEASDTIE 784
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 785 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 832
>sp|Q58G87|UBQ3_ORYSJ Polyubiquitin 3 OS=Oryza sativa subsp. japonica GN=UBQ3 PE=2 SV=2
Length = 381
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV F DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>sp|P0CG73|UBI1P_CANAX Polyubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1
Length = 229
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ S Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRSRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>sp|P42739|UBIQP_ACECL Polyubiquitin (Fragment) OS=Acetabularia cliftonii PE=3 SV=2
Length = 423
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DTV +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 118 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 177
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DTV
Sbjct: 178 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTVE 217
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 218 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 269
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD V ++ ++Q +P D I+
Sbjct: 270 M-----QIFVKTLTG-KTITLEVESSDTVENVKSKIQDKE-----GIPPDQQRLIFAGKQ 318
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 319 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 355
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DTV +K KI+ +GIP +Q L+F G+ L+D +
Sbjct: 42 MQIFVKTLTGKTITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYN 101
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DTV
Sbjct: 102 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTVE 141
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 142 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 193
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD V ++ ++Q +P D I+
Sbjct: 194 M-----QIFVKTLTG-KTITLEVESSDTVENVKSKIQDKE-----GIPPDQQRLIFAGKQ 242
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 243 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 279
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DTV +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 270 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 329
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DTV
Sbjct: 330 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTVE 369
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 370 NVKSKIQDKEGIPPDQQRIIFAGKQLEDGRTLADYNIQKESTLHLVLR 417
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 105/242 (43%), Gaps = 49/242 (20%)
Query: 36 IPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKIN 95
IP +Q L+F G+ L+D R + I + S + L++ Q+ + +
Sbjct: 1 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLT---------- 50
Query: 96 IPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDC 155
KT + L++ +DTV +K KI + E IP ++ + +G +L+D +L D
Sbjct: 51 ----GKT------ITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADY 100
Query: 156 ELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
+ + + + +R GM ++ V T G K I +EV +SD V ++ +
Sbjct: 101 NIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTVENVKSK 146
Query: 216 LQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSV 265
+Q +P D I+ ++D R+ +++ + T+ +IF ++
Sbjct: 147 IQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 201
Query: 266 TG 267
TG
Sbjct: 202 TG 203
>sp|P0CG70|UBI4P_NEUCR Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=ubi-4 PE=1 SV=1
Length = 305
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 129/277 (46%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + +++++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKQKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K+KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K+KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>sp|P0CG82|UBIQP_TETPY Polyubiquitin OS=Tetrahymena pyriformis GN=TU20 PE=3 SV=1
Length = 381
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I ++V ASD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLDVEASDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T++V DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + LD++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLDVEASDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>sp|Q8MKD1|UBB_HORSE Polyubiquitin-B OS=Equus caballus GN=UBB PE=2 SV=3
Length = 305
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D FI+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRFIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q +F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>sp|P0CG63|UBI4P_YEAST Polyubiquitin OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=UBI4 PE=1 SV=1
Length = 381
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>sp|P69315|UBIQP_LINUS Polyubiquitin (Fragment) OS=Linum usitatissimum PE=3 SV=2
Length = 305
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 42 MQIFLKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 101
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 102 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 141
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 142 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 193
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 194 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 242
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 243 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 279
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 118 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 177
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 178 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 217
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 218 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 269
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQ 217
M ++ V T G K I +EV +SD + ++ ++Q
Sbjct: 270 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQ 300
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 49/242 (20%)
Query: 36 IPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKIN 95
IP +Q L+F G+ L+D R + I + S + L++ Q I LK
Sbjct: 1 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ-----------IFLK-- 47
Query: 96 IPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDC 155
KT + L+++ +DT+ +K KI + E IP ++ + +G +L+D R+L D
Sbjct: 48 -TLTGKT------ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 100
Query: 156 ELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
+ + + + +R GM ++ V T G K I +EV +SD + ++ +
Sbjct: 101 NIQKESTLHLVLR--------LRGGM-----QIFVKTLTG-KTITLEVESSDTIDNVKAK 146
Query: 216 LQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTI----------EIFNGSV 265
+Q +P D I+ ++D R+ +++ + T+ +IF ++
Sbjct: 147 IQDKE-----GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 201
Query: 266 TG 267
TG
Sbjct: 202 TG 203
>sp|P0CG74|UBI4P_CANAX Polyubiquitin OS=Candida albicans GN=UBI4 PE=1 SV=1
Length = 305
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>sp|P0CG72|UBI4P_SCHPO Polyubiquitin OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=ubi4 PE=1 SV=1
Length = 382
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>sp|P0CG75|UBI4P_KLULA Polyubiquitin OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
/ DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ubi4
PE=1 SV=1
Length = 381
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>sp|P0CH32|UBQ4_ARATH Polyubiquitin 4 OS=Arabidopsis thaliana GN=UBQ4 PE=1 SV=1
Length = 382
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>sp|Q3E7T8|UBQ14_ARATH Polyubiquitin 14 OS=Arabidopsis thaliana GN=UBQ14 PE=1 SV=2
Length = 305
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>sp|P69325|UBIQP_SOYBN Polyubiquitin OS=Glycine max GN=SUBI-1 PE=2 SV=2
Length = 305
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>sp|Q1EC66|UBQ3_ARATH Polyubiquitin 3 OS=Arabidopsis thaliana GN=UBQ3 PE=1 SV=1
Length = 306
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>sp|P69309|UBIQP_AVEFA Polyubiquitin OS=Avena fatua PE=2 SV=2
Length = 305
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>sp|P42740|UBIQP_AGLNE Polyubiquitin OS=Aglaothamnion neglectum PE=2 SV=2
Length = 457
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTIT--------------GKT------ITLEVESSDTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 177 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 228
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 229 M-----QIFVKTLTG-KTITLEVESSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 277
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 278 LEDGRTLSDYNLQKESTLHLVLRLRGGMQIFVKTLTG 314
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
+ + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 LQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 329 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 380
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 381 M-----QIFVKTLTG-KTITLEVESSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 429
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 430 LEDGRTLSDYNIQKESTL 447
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
+ S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 NQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTITG-KTITLEVESSDTIENVKTKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>sp|P0CH05|UBI2P_PETCR Polyubiquitin OS=Petroselinum crispum GN=PCUBI4-2 PE=3 SV=1
Length = 458
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>sp|P0CH04|UBI1P_PETCR Polyubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=2 SV=1
Length = 458
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>sp|P69322|UBIQP_PEA Polyubiquitin OS=Pisum sativum GN=PU1 PE=2 SV=2
Length = 381
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLADYNIQKESTL 371
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>sp|Q8H159|UBQ10_ARATH Polyubiquitin 10 OS=Arabidopsis thaliana GN=UBQ10 PE=1 SV=2
Length = 457
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>sp|P0CG85|UBI1P_NICSY Polyubiquitin OS=Nicotiana sylvestris GN=UBI11 PE=2 SV=1
Length = 457
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 452
>sp|P0CG50|UBC_MOUSE Polyubiquitin-C OS=Mus musculus GN=Ubc PE=1 SV=2
Length = 734
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
>sp|P0CG84|UBI4P_NICSY Polyubiquitin (Fragment) OS=Nicotiana sylvestris GN=UBI4 PE=2 SV=1
Length = 377
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 73 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 132
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 133 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 172
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 173 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 224
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 225 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 273
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 274 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 310
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 49/268 (18%)
Query: 10 GKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQL 69
GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R + I + S + L
Sbjct: 6 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 65
Query: 70 LVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEM 129
++ Q+ + + KT + L+++ +DT+ +K KI +
Sbjct: 66 VLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTIDNVKAKIQDK 105
Query: 130 ESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSGMGPRKLKLL 189
E IP ++ + +G +L+D R+L D + + + + +R GM ++
Sbjct: 106 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGM-----QIF 152
Query: 190 VLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRW 249
V T G K I +EV +SD + ++ ++Q +P D I+ ++D R+
Sbjct: 153 VKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQLEDGRTLAD 206
Query: 250 HHVGQGDTI----------EIFNGSVTG 267
+++ + T+ +IF ++TG
Sbjct: 207 YNIQKESTLHLVLRLRGGMQIFVKTLTG 234
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 225 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 284
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 285 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 324
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 325 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 372
>sp|P0CH33|UBQ11_ARATH Polyubiquitin 11 OS=Arabidopsis thaliana GN=UBQ11 PE=1 SV=1
Length = 229
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLADYNIQKESTL 219
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVESSDTID 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>sp|P0CG68|UBC_PIG Polyubiquitin-C OS=Sus scrofa GN=UBC PE=2 SV=1
Length = 533
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI++ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 506 LEDGRTLSDYNIQKESTL 523
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 480
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 481 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
>sp|Q63429|UBC_RAT Polyubiquitin-C OS=Rattus norvegicus GN=Ubc PE=1 SV=1
Length = 810
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 760
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
M ++ V T G K I +EV S N ++++E
Sbjct: 761 M-----QIFVKTLTG-KTITLEVEPSVNTKKVKQE 789
>sp|P0CG55|UBB_SHEEP Polyubiquitin-B OS=Ovis aries GN=UBB PE=2 SV=1
Length = 305
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRMRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>sp|P0CG54|UBB_CAVPO Polyubiquitin-B OS=Cavia porcellus GN=UBB PE=2 SV=1
Length = 311
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>sp|P0CH27|RL402_TRYCR Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi PE=2 SV=1
Length = 356
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVESSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV +SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTIALEVESSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK +EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------IALEVESSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>sp|P0CG51|UBB_RAT Polyubiquitin-B OS=Rattus norvegicus GN=Ubb PE=1 SV=1
Length = 305
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>sp|P0CG49|UBB_MOUSE Polyubiquitin-B OS=Mus musculus GN=Ubb PE=1 SV=1
Length = 305
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>sp|P0CG62|UBB_CHICK Polyubiquitin-B OS=Gallus gallus GN=UBB PE=2 SV=1
Length = 305
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>sp|P0CH28|UBC_BOVIN Polyubiquitin-C OS=Bos taurus GN=UBC PE=1 SV=1
Length = 690
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI++ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>sp|P0CG48|UBC_HUMAN Polyubiquitin-C OS=Homo sapiens GN=UBC PE=1 SV=3
Length = 685
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 658 LEDGRTLSDYNIQKESTL 675
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 632
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 633 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
>sp|P0CG69|UBIQP_DROME Polyubiquitin OS=Drosophila melanogaster GN=Ubi-p63E PE=3 SV=1
Length = 763
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
>sp|P62976|UBIQP_CRIGR Polyubiquitin OS=Cricetulus griseus PE=2 SV=2
Length = 658
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + + L+++ +DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLT--------------------GKTITLEVEPSDTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + + IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKE 215
M ++ V T G K I +EV S+ + + ++E
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSNTIKKSKQE 637
>sp|P0CG66|UBC_GORGO Polyubiquitin-C OS=Gorilla gorilla gorilla GN=UBC PE=3 SV=1
Length = 609
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
>sp|P0CG53|UBB_BOVIN Polyubiquitin-B OS=Bos taurus GN=UBB PE=1 SV=1
Length = 305
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>sp|P0CG61|UBC_PONPY Polyubiquitin-C OS=Pongo pygmaeus GN=UBC PE=3 SV=1
Length = 761
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
>sp|P0CG64|UBC_PANTR Polyubiquitin-C OS=Pan troglodytes GN=UBC PE=3 SV=1
Length = 761
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 404
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 405 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 456
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 457 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 505
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 542
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 556
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 557 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 608
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 609 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 657
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 658 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 708
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 709 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 756
>sp|P0CG60|UBB_PONPY Polyubiquitin-B OS=Pongo pygmaeus GN=UBB PE=3 SV=1
Length = 229
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>sp|P0CG65|UBB_PANTR Polyubiquitin-B OS=Pan troglodytes GN=UBB PE=3 SV=1
Length = 229
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>sp|P0CG47|UBB_HUMAN Polyubiquitin-B OS=Homo sapiens GN=UBB PE=1 SV=1
Length = 229
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>sp|P0CG67|UBB_GORGO Polyubiquitin-B OS=Gorilla gorilla gorilla GN=UBB PE=3 SV=1
Length = 229
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SD + ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 202 LEDGRTLSDYNIQKESTL 219
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV DT+ +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ ++ K I L++ PS DT+
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV-KTLTGKTITLEVE-PS------------------DTIE 176
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
>sp|P0CG88|UBIQJ_DICDI Polyubiquitin-J OS=Dictyostelium discoideum GN=ubqJ PE=1 SV=1
Length = 305
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>sp|P0CG80|UBIQI_DICDI Polyubiquitin-I OS=Dictyostelium discoideum GN=ubqI PE=1 SV=1
Length = 305
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
>sp|P0CG81|UBIQH_DICDI Polyubiquitin-H OS=Dictyostelium discoideum GN=ubqH PE=1 SV=1
Length = 381
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 49/277 (17%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 100
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 152
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 153 M-----QIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 201
Query: 241 MDDDRSFRWHHVGQGDTI----------EIFNGSVTG 267
++D R+ +++ + T+ +IF ++TG
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVEGSDNIE 252
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVRPSPTATSTTSSG 180
+K KI + E IP ++ + +G +L+D R+L D + + + + +R G
Sbjct: 253 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGG 304
Query: 181 MGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNV 240
M ++ V T G K I +EV SDN+ ++ ++Q +P D I+
Sbjct: 305 M-----QIFVKTLTG-KTITLEVECSDNIENVKAKIQDKE-----GIPPDQQRLIFAGKQ 353
Query: 241 MDDDRSFRWHHVGQGDTI 258
++D R+ +++ + T+
Sbjct: 354 LEDGRTLSDYNIQKESTL 371
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 1 MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60
M + + GK T+EV D + +K KI+ +GIP +Q L+F G+ L+D R +
Sbjct: 229 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120
I + S + L++ Q+ + + KT + L+++ +D +
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLT--------------GKT------ITLEVECSDNIE 328
Query: 121 RLKEKIHEMESIPVNRLLVQSSGAELQDHRSLRDCELMDNAEIDVHVR 168
+K KI + E IP ++ + +G +L+D R+L D + + + + +R
Sbjct: 329 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,042,192
Number of Sequences: 539616
Number of extensions: 4285927
Number of successful extensions: 17105
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 16085
Number of HSP's gapped (non-prelim): 604
length of query: 269
length of database: 191,569,459
effective HSP length: 115
effective length of query: 154
effective length of database: 129,513,619
effective search space: 19945097326
effective search space used: 19945097326
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)